Miyakogusa Predicted Gene
- Lj6g3v1776660.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MFM1_SOYBN |
445 |
90.0 |
96.1 |
(tr|I1MFM1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G22290.1 |
395 |
77.2 |
90.8 |
| Symbols: | Ubiquitin-specific protease family C19-related protein | chr4:11783199-11785730 REVERSE LENGTH=445 |
| Medicago |
Medtr2g025190.1 |
432 |
87.5 |
94.8 |
| ubiquitin-specific protease family C19 protein | HC | chr2:8970982-8965110 | 20130731 |
| Soybean |
Glyma15g12000.1 |
445 |
90.0 |
96.1 |
|
| LJGI |
gnl|LJGI|TC58821 |
73.8 |
87.0 |
87.0 |
similar to UniRef100_A7PVG3 Cluster: Chromosome chr9 scaffold_33, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_33, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v1776660.1 |
length: 255 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR24006 |
FAMILY |
1.9e-145 |
1-242 |
| HMMPanther |
PTHR24006:SF12 |
SUBFAMILY |
1.9e-145 |
1-242 |
| Seg |
seg |
seg |
NA |
3-23 |
- Wolf-PSORT
Lj6g3v1776660.1 chlo 7, extr 2, E.R._vacu 2, vacu 1.5, E.R. 1.5, nucl 1, plas 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v1776660.1 |
|