Miyakogusa Predicted Gene

Lj6g3v1574600.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3TAL0_LOTJA 181 100.0 100.0 (tr|I3TAL0) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1

TAIR_pep AT3G17300.1 144 76.2 91.7 | Symbols: | unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr3:5907616-5908695 FORWARD LENGTH=91

Medicago Medtr2g032700.1 158 84.7 94.1 | complex 1 protein, LYR family protein | HC | chr2:12314059-12310408 | 20130731

Soybean Glyma09g03610.1 159 88.1 92.9

LJGI gnl|LJGI|TC61764 505 100.0 100.0 similar to UniRef100_A7NVV6 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v1574600.1 length: 85 aa.

IPR008011 Complex 1 LYR protein

method AccNumber shortName E-value location

HMMPfam PF13232 Complex1_LYR_1 1.9e-11 16-64

Wolf-PSORT

Lj6g3v1574600.1 cyto 8.5, cyto_nucl 8.5, nucl 5.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v1574600.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3TAL0_LOTJA	181	100.0	100.0	(tr\|I3TAL0) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep	AT3G17300.1	144	76.2	91.7	\| Symbols: \| unknown protein; Has 48 Blast hits to 48 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). \| chr3:5907616-5908695 FORWARD LENGTH=91
Medicago	Medtr2g032700.1	158	84.7	94.1	\| complex 1 protein, LYR family protein \| HC \| chr2:12314059-12310408 \| 20130731
Soybean	Glyma09g03610.1	159	88.1	92.9
LJGI	gnl\|LJGI\|TC61764	505	100.0	100.0	similar to UniRef100_A7NVV6 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)

IPR008011	Complex 1 LYR protein
Lj6g3v1574600.1				length: 85 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF13232	Complex1_LYR_1	1.9e-11	16-64