Miyakogusa Predicted Gene

Lj6g3v1574600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1574600.1 Non Chatacterized Hit- tr|D8SGJ5|D8SGJ5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,50,6e-16,Complex1_LYR_1,Complex 1 LYR protein,CUFF.59628.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17300.1 | Symbols:  | unknown protein; Has 48 Blast hits to ...   144   8e-36
AT3G17300.2 | Symbols:  | unknown protein; EXPRESSED IN: 22 plan...    84   2e-17

>AT3G17300.1 | Symbols:  | unknown protein; Has 48 Blast hits to
          48 proteins in 21 species: Archae - 0; Bacteria - 0;
          Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
          Eukaryotes - 8 (source: NCBI BLink). |
          chr3:5907616-5908695 FORWARD LENGTH=91
          Length = 91

 Score =  144 bits (364), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 64/84 (76%), Positives = 77/84 (91%)

Query: 1  MPSLQTALPPELANNAIRLYRECLRRAKYIGQWNYNTELLVDMVRQQFKKNIHETDPEKI 60
          MPSLQT+LPPELANN +RLYRECLRRAK+IG+  +NTEL+V MVRQQFKK+++ETDPEKI
Sbjct: 1  MPSLQTSLPPELANNVVRLYRECLRRAKFIGKQQHNTELVVGMVRQQFKKHMNETDPEKI 60

Query: 61 QKFKDDAARGLINHILYESETMSG 84
          QK KDDAARGLINH+L+ES  ++G
Sbjct: 61 QKLKDDAARGLINHMLFESAKLTG 84


>AT3G17300.2 | Symbols:  | unknown protein; EXPRESSED IN: 22 plant
          structures; EXPRESSED DURING: 13 growth stages; Has 35
          Blast hits to 35 proteins in 14 species: Archae - 0;
          Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34;
          Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
          | chr3:5907659-5908695 FORWARD LENGTH=74
          Length = 74

 Score = 84.0 bits (206), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 46/50 (92%)

Query: 35 YNTELLVDMVRQQFKKNIHETDPEKIQKFKDDAARGLINHILYESETMSG 84
          +NTEL+V MVRQQFKK+++ETDPEKIQK KDDAARGLINH+L+ES  ++G
Sbjct: 18 HNTELVVGMVRQQFKKHMNETDPEKIQKLKDDAARGLINHMLFESAKLTG 67