Miyakogusa Predicted Gene

Lj6g3v1008180.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T103_LOTJA 728 90.6 90.6 (tr|I3T103) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G26930.1 483 69.7 81.9 | Symbols: ATCDPMEK, PDE277, ISPE, CDPMEK | 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase | chr2:11491829-11494229 REVERSE LENGTH=383
Medicago Medtr3g437340.1 605 75.3 82.1 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | HC | chr3:12674189-12687917 | 20130731
Soybean Glyma20g08930.1 632 80.3 86.8  
LJGI gnl|LJGI|TC60284 2296 99.4 99.4 similar to UniRef100_A5A5H5 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; n=1; Salvia miltiorrhiza|Rep: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase - Salvia miltiorrhiza (Chinese sage), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v1008180.1 length: 392 aa.
IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
method AccNumber shortName E-value location
Biological Process GO:0016114 terpenoid biosynthetic process    
Molecular Function GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity    
HAMAP MF_00061 IspE 27.365 85-381
HMMPanther PTHR20861:SF2 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL 7.6e-136 53-381
HMMTigr TIGR00154 ispE: 1.6e-56 85-339
IPR006204 GHMP kinase N-terminal domain
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00288 GHMP_kinases_N 1.1e-08 170-223
IPR013750 GHMP kinase, C-terminal domain
HMMPfam PF08544 GHMP_kinases_C 0.0001 295-351
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 2.1e-51 86-241
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 7.4e-39 83-241
no_ID  
Gene3D G3DSA:3.30.70.890 no description 3.6e-22 248-342
HMMPanther PTHR20861 HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL 7.6e-136 53-381
Seg seg seg NA 178-193
332-343
378-386
superfamily SSF55060 GHMP 1.7e-17 246-366
Wolf-PSORT
Lj6g3v1008180.1	chlo 12.5, chlo_mito 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v1008180.1