Miyakogusa Predicted Gene

Lj6g3v1008180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1008180.1 Non Characterized Hit- tr|I3T103|I3T103_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.96,0,4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL
KINASE,4-diphosphocytidyl-2C-methyl-D-erythritol kinase; ,CUFF.58757.1
         (392 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g437340.1 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kin...   605   e-173

>Medtr3g437340.1 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
           | HC | chr3:12674189-12687917 | 20130731
          Length = 391

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 299/397 (75%), Positives = 326/397 (82%), Gaps = 11/397 (2%)

Query: 1   MASSHFLCSNHVFPTSQNPFRSSQLPQFRPNGSSNFHFKL---RPHLVK--AMVSDSNTS 55
           MASS FLCSN+  PT    FR+  LPQFRPNGSSNFH KL   RP  VK  AMVSDS  S
Sbjct: 1   MASSQFLCSNNSIPT----FRTIHLPQFRPNGSSNFHSKLHFHRPQFVKVKAMVSDS--S 54

Query: 56  RKQLEVVYDHDERINKLADEVDKNAPLSRLTLFSPCKINVFLRMTNKREDGYHDLASLFH 115
           +KQLE+VYDHDERINKLAD++DK AP+SRLTLFSPCKINVFLR+TNKREDGYHDLASLFH
Sbjct: 55  KKQLEIVYDHDERINKLADQIDKEAPISRLTLFSPCKINVFLRITNKREDGYHDLASLFH 114

Query: 116 VISLGDTIKFSLSPSKTTDRLSTNVSGVPLDDRNLIIRALNLYRKKTGSDNFFWIHLDKK 175
           VISLGD +KFSLSPS T D LSTNVSGVPLDDRNLII+ALNLYRKKTG++ FFWIHLDK+
Sbjct: 115 VISLGDILKFSLSPSNTKDALSTNVSGVPLDDRNLIIKALNLYRKKTGTEKFFWIHLDKR 174

Query: 176 VPXXXXXXXXXXXXXXXXWAANQFSGCPSTEKELQEWSGEIGSDVPFFFSQGAAYCTGRG 235
           VP                WAANQFSGCP+TEKELQEWS EIGSDVPFFFS GAAYCTGRG
Sbjct: 175 VPTGAGLGGGSSNAATALWAANQFSGCPATEKELQEWSSEIGSDVPFFFSHGAAYCTGRG 234

Query: 236 EIVEDIPPPVSLDIPMVLIKPPQACSTAEVYKRLRLDQTSNVDPSTLLEKISRNGISQDV 295
           EIV+++PP VS DIPMVLIKP QACSTAEVYKRLRLDQTSNVDPS LLE+IS +GISQDV
Sbjct: 235 EIVQNVPPLVSSDIPMVLIKPQQACSTAEVYKRLRLDQTSNVDPSILLERISTSGISQDV 294

Query: 296 CINDLEPPAFEVLPSLKRLKQRITAAGRGKYDAVFMXXXXXXXXXXXXPDPPQFVYDDDE 355
           CINDLEPPAFEVLPSLKRLKQRITAAGRG+YDAVFM            PDPPQF+YDD+E
Sbjct: 295 CINDLEPPAFEVLPSLKRLKQRITAAGRGEYDAVFMSGSGSTIVGIGSPDPPQFIYDDEE 354

Query: 356 YQDVFLSDAYFLTREPNQWYREXXXXXXXXXFVSETV 392
           Y+DVFLSDA FLTRE N+WY+E         F+SE+V
Sbjct: 355 YRDVFLSDANFLTREENEWYKEPASTPTSESFISESV 391