Miyakogusa Predicted Gene

Lj6g3v0960480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SBA7_LOTJA 375 74.0 74.0 (tr|I3SBA7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G12310.1 214 54.8 65.3 | Symbols: | RING/U-box superfamily protein | chr5:3980485-3982093 REVERSE LENGTH=254
Medicago --No_Hits--        
Soybean Glyma07g35790.1 285 59.6 65.8  
LJGI gnl|LJGI|TC63831 1546 100.0 100.0 similar to UniRef100_A9TXC7 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (72%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0960480.1 length: 258 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 8.5e-10 49-95
HMMSmart SM00184 Ring 3.8e-06 50-92
ProfileScan PS50089 ZF_RING_2 12.563 50-93
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.9e-11 48-96
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 68-77
no_ID  
HMMPanther PTHR22764 RING 1.5e-84 43-239
HMMPanther PTHR22764:SF1 GB 1.5e-84 43-239
Seg seg seg NA 140-166
203-212
216-225
229-247
superfamily SSF57850 RING/U-box 1.8e-15 43-114
Wolf-PSORT
Lj6g3v0960480.1	nucl 12, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0960480.1