Miyakogusa Predicted Gene

Lj6g3v0528550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K4J1_SOYBN 1630 72.8 80.1 (tr|I1K4J1) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G22300.2 865 45.8 59.3 | Symbols: CAMTA3, SR1 | signal responsive 1 | chr2:9471599-9476472 FORWARD LENGTH=1032
Medicago Medtr8g090205.2 1479 67.6 76.1 | calmodulin-binding transcription activator | HC | chr8:37845933-37838861 | 20130731
Soybean Glyma05g31190.1 1530 69.1 76.5  
LJGI gnl|LJGI|TC69028 1372 100.0 100.0 similar to UniRef100_A7NVX6 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0528550.1 length: 1106 aa.
IPR000048 IQ motif, EF-hand binding site
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00612 IQ 0.00057 933-951
956-974
HMMSmart SM00015 Short 0.069 930-952
953-975
ProfileScan PS50096 IQ 8.041 931-960
954-978
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 1.4e+03 756-785
795-824
ProfileScan PS50088 ANK_REPEAT 8.656 756-788
IPR002909 Cell surface receptor IPT/TIG
Molecular Function GO:0005515 protein binding    
HMMPfam PF01833 TIG 2.7e-05 521-596
IPR005559 CG-1 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03859 CG-1 2.1e-50 21-136
HMMSmart SM01076 no description 9.4e-74 18-136
ProfileScan PS51437 CG_1 76.695 15-141
IPR013783 Immunoglobulin-like fold
Gene3D G3DSA:2.60.40.10 no description 0.0001 521-595
IPR014756 Immunoglobulin E-set
superfamily SSF81296 E 9.2e-20 520-607
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 3.2e-16 714-821
HMMPfam PF12796 Ank_2 1.1e-07 712-783
ProfileScan PS50297 ANK_REP_REGION 17.024 706-817
superfamily SSF48403 Ankyrin 5.4e-17 714-817
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.1e-10 926-985
no_ID  
HMMPanther PTHR23335 CALMODULIN-BINDING 1.6e-229 1-1104
Seg seg seg NA 644-655
664-681
689-709
1087-1100
Wolf-PSORT
Lj6g3v0528550.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0528550.1