Miyakogusa Predicted Gene

Lj6g3v0525130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LRV4_SOYBN 2186 85.6 89.7 (tr|K7LRV4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G22125.1 1774 71.6 81.2 | Symbols: CSI1 | binding | chr2:9406793-9414223 FORWARD LENGTH=2150
Medicago Medtr3g087800.1 2086 81.1 86.9 | cellulose synthase-interactive protein | HC | chr3:39790305-39779771 | 20130731
Soybean Glyma11g36150.1 2182 85.6 89.7  
LJGI gnl|LJGI|AV410152 791 100.0 100.0 homologue to UniRef100_A7PL51 Cluster: Chromosome chr7 scaffold_20, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_20, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0525130.1 length: 1363 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00185 Armadillo/beta-catenin-like 2.2 72-110
156-198
525-568
570-611
652-693
738-779
780-820
822-862
906-948
1071-1110
1198-1238
ProfileScan PS50176 ARM_REPEAT 9.537 537-581
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.3e-21 366-651
657-1031
1044-1243
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 4.5e-10 525-913
921-1286
1-327
276-500
no_ID  
HMMPanther PTHR23315 BETA 0 357-1296
HMMPanther PTHR23315:SF43 ARMADILLO/BETA-CATENIN 0 357-1296
Seg seg seg NA 79-98
113-124
941-952
1069-1087
1135-1149
Wolf-PSORT
Lj6g3v0525130.1	plas 8, vacu 2, golg 2, extr 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0525130.1