Miyakogusa Predicted Gene
- Lj5g3v2264220.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3RZV8_LOTJA |
795 |
99.7 |
99.7 |
(tr|I3RZV8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G55350.1 |
442 |
59.8 |
74.0 |
| Symbols: | PIF / Ping-Pong family of plant transposases | chr3:20518518-20520690 FORWARD LENGTH=406 |
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma20g23150.2 |
627 |
80.1 |
86.0 |
|
| LJGI |
gnl|LJGI|GO030889 |
1031 |
99.6 |
99.6 |
weakly similar to UniRef100_A7PIZ9 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2264220.1 |
length: 382 aa. |
| IPR026103 |
Harbinger transposase-derived nuclease |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR22930 |
UNCHARACTERIZED |
9.9e-84 |
51-346 |
| no_ID |
|
| HMMPfam |
PF13359 |
DDE_4 |
9.3e-35 |
168-334 |
- Wolf-PSORT
Lj5g3v2264220.1 nucl 6, cyto 3, cysk_nucl 3, chlo 1, plas 1, vacu 1, E.R. 1, golg 1, golg_plas 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2264220.1 |
|