Miyakogusa Predicted Gene

Lj5g3v2264220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v2264220.1 Non Chatacterized Hit- tr|I1IJ83|I1IJ83_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,40,1e-16,UNCHARACTERIZED,Harbinger transposase-derived nuclease;
DDE_4,NULL,CUFF.57130.1
         (382 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23150.2                                                       627   e-180
Glyma02g14360.1                                                        72   1e-12
Glyma09g30520.1                                                        59   1e-08
Glyma18g24960.1                                                        57   3e-08

>Glyma20g23150.2 
          Length = 402

 Score =  627 bits (1617), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 309/386 (80%), Positives = 332/386 (86%), Gaps = 9/386 (2%)

Query: 1   MSSIKGFKKRKKTENKD--DHTATPLYSQPSDWWHHFSHRISGPLAQSKDIGKFESVLKI 58
           M SI+G KKRKK +NKD  D +AT       DWWHHFS RISGPLA+SK+I KFESV KI
Sbjct: 18  MGSIRGIKKRKKADNKDGPDASATSF-----DWWHHFSLRISGPLARSKNIEKFESVFKI 72

Query: 59  SRKTFNYICSLVEKDMLARSC--VDLNGNHLSLNDQVAVALRRLSSGESLSTIGDSFLMN 116
           SRKTFNYICSLVE+DMLAR+   VDLNGN LSLNDQVAVALRRLSSGESLSTIG+SF MN
Sbjct: 73  SRKTFNYICSLVEEDMLARASNFVDLNGNRLSLNDQVAVALRRLSSGESLSTIGESFRMN 132

Query: 117 QSAVSQVTWLFVEAMEERGLHHLSWPSTETAMEEIKFKFENIRGLSNCCGAVDSTHILMT 176
           QS VSQVTW FVE MEERGLHHLSW STE  MEEIK KFENIRGLSNCCGAVDSTHI+MT
Sbjct: 133 QSTVSQVTWKFVETMEERGLHHLSWASTEMEMEEIKSKFENIRGLSNCCGAVDSTHIMMT 192

Query: 177 LPSGDTENSVWLDRKKNCSMILQAIVDPDLRFRDVVGGWPGSLSDEYVLRHSEFFKLAEE 236
           LPS D  NSVWLDR+KNCSM+LQAIVDPDLRFRD+V GWPGS+SDE VLR S FFKLAEE
Sbjct: 193 LPSVDALNSVWLDREKNCSMVLQAIVDPDLRFRDIVTGWPGSMSDEQVLRSSSFFKLAEE 252

Query: 237 GKRLNGAEKMLPEGTALREYIIGDTGFPLLPWLLTPYECKDLSDVEVEFNKRVVATHMVA 296
           GKRLNG +K LP+GT  REYIIGDTGFPL  WLLTPYE K  S+V+VEFNKRVV T MVA
Sbjct: 253 GKRLNGGKKTLPDGTLFREYIIGDTGFPLFSWLLTPYEGKGFSNVQVEFNKRVVETQMVA 312

Query: 297 KRALARLKQMWKIIQGVMWKPDKHKLPRIVLVCCILHNIVIDMEDEVMDEVPLCPQHDSG 356
           K+ALARLK MWKIIQGVMWKPDKHKLPRI+LVCCILHNIVIDMEDEV+ ++P C QHDS 
Sbjct: 313 KKALARLKDMWKIIQGVMWKPDKHKLPRIILVCCILHNIVIDMEDEVLIDMPSCHQHDSR 372

Query: 357 YQDQTCEFADNTAYTMREKLSLHLSG 382
           YQDQT EFADNTA  MREKLSL+LSG
Sbjct: 373 YQDQTSEFADNTATIMREKLSLYLSG 398


>Glyma02g14360.1 
          Length = 701

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 29/200 (14%)

Query: 161 LSNCCGAVDSTHILMTLPSGDTENSVWLDRKKNCSMILQAIVDPDLRFRDVVGGWPGSLS 220
             +C GA+D THI + +P    E + +  RK   +  + A  + D++F  V+ GW G+ S
Sbjct: 99  FKDCIGAIDGTHIRVKVPRA--EAARFRGRKDYPTQNVLAACNFDMKFTYVLPGWEGTAS 156

Query: 221 DEYVLRHSEFFKLAEEGKRLNGAEKMLPEGTALREYIIGDTGFPLLPWLLTPYE------ 274
           D  +L+ +    L+ E          +PEG    +Y +GD GF L   +LTPY       
Sbjct: 157 DSRILKDA----LSREDSL------KIPEG----KYYLGDAGFMLKRGVLTPYRGVRYHL 202

Query: 275 ----CKDLSDVEVEFNKRVVATHMVAKRALARLKQMWKIIQ-GVMWKPDKHKLPRIVLVC 329
                +   + +  FN R  +   V +R    LK+ + I+  G         +  IVL C
Sbjct: 203 KEYSIRSPQNSKELFNHRHASLRNVIERCFGVLKKRFPILSTGTEPFYSFEVMTDIVLAC 262

Query: 330 CILHNIV--IDMEDEVMDEV 347
           CILHN +  +D+++ ++ EV
Sbjct: 263 CILHNFLMGVDVDETLIAEV 282


>Glyma09g30520.1 
          Length = 392

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/295 (22%), Positives = 121/295 (41%), Gaps = 40/295 (13%)

Query: 56  LKISRKTFNYICSLVEKDMLARSCVDLNGNHLSLNDQVAVALRRLSSGESLSTIGDSFLM 115
            ++ +  F  +C +++   L R     + N + + +Q+ + +  +        + + F  
Sbjct: 46  FRMDKHVFYKLCDILQAKGLLR-----HTNRIKIEEQLGIFMFIIGHNLRTRAVQELFRY 100

Query: 116 NQSAVSQVTWLFVEAMEERGLHHLSWPSTETAMEEIKFKFENIR---GLSNCCGAVDSTH 172
           +   +S+     + A+    L     P +    E I    E+ R      +C G +D  H
Sbjct: 101 SGETISRHFNNVLNAIMSISLDLFQPPGSGVPSEII----EDPRFYPYFKDCVGVIDGIH 156

Query: 173 ILMTLPSGDTENSVWLDRKKNCSMILQAIVDPDLRFRDVVGGWPGSLSDEYVLRHSEFFK 232
           + +T+  G  E   + ++    S  + A    DL+F  V+ GW GS +D  V   +    
Sbjct: 157 VPVTV--GVDEQGPFRNKNGLLSQNILAACSFDLKFHYVLAGWEGSATDLLVFNSAI--- 211

Query: 233 LAEEGKRLNGAEKMLPEGTALREYIIGDTGFPLLPWLL-----TPYECKD-LSDVEVE-- 284
                 R N  +  +PEG    +Y I D+ +P +P  +     TPY  K+ LSD   +  
Sbjct: 212 -----TRRNKLQ--VPEG----KYYIVDSKYPNVPGFIAPYSSTPYYSKEFLSDYHPQDA 260

Query: 285 ---FNKRVVATHMVAKRALARLKQMWKIIQGVMWKPDKHKLPRIVLVCCILHNIV 336
              FN+R      V  R    LK  + I+      P + ++ ++V+  C LHN +
Sbjct: 261 GELFNQRHSLLRHVTDRTFGILKARFPILMSAPSYPLQTQV-KLVVAACALHNYI 314


>Glyma18g24960.1 
          Length = 604

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)

Query: 56  LKISRKTFNYICSLV-EKDMLARSCVDLNGNHLSLNDQVAVALRRLSSGESLSTIGDSFL 114
           L++S+K F  +C ++ EK  L ++  D       +++ VA+ L  L+       +  S+ 
Sbjct: 82  LRVSKKAFFKVCRILQEKGQLVKTKND------PIDEVVAMFLHILAHNLKYRVVHFSYC 135

Query: 115 MNQSAVSQVTWLFVEAMEERGLHHLSWPSTETAMEEIKFKFENIRG--------LSNCCG 166
            +   +S            R   ++     + + E +KF   NI G          N  G
Sbjct: 136 RSMETIS------------RQFKNVLRAIMKVSKEYLKFHEYNIEGSVENKWRWFKNSIG 183

Query: 167 AVDSTHILMTLPSGDTENSVWLDRKKNCSMILQAIVDPDLRFRDVVGGWPGSLSDEYVLR 226
           A+D  HI +T+ + D     + +RK + S  +  +  PDLRF  V+ GW GS  D  VLR
Sbjct: 184 ALDGIHIPVTVSAEDRPR--YRNRKGDISTNVLGVCGPDLRFIYVLPGWEGSAGDSRVLR 241

Query: 227 HSEFFKLAEEGKRLNGAEKMLPEGTALREYIIGDTGFPLLPWLLTPY 273
                   +   R N     +P G    +Y + D G+   P  L PY
Sbjct: 242 --------DALHRQNCLH--IPNG----KYFLVDAGYTNGPGFLAPY 274