Miyakogusa Predicted Gene
- Lj5g3v2259630.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NF52_SOYBN |
449 |
84.8 |
89.8 |
(tr|I1NF52) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G19960.1 |
369 |
74.3 |
79.6 |
| Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD LENGTH=1166 |
| Medicago |
Medtr1g114540.1 |
442 |
83.7 |
89.8 |
| P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr1:51705810-51717857 | 20130731 |
| Soybean |
Glyma20g23660.1 |
449 |
84.8 |
89.8 |
|
| LJGI |
gnl|LJGI|TC63675 |
496 |
86.4 |
86.4 |
similar to UniRef100_O24515 Cluster: Unconventional myosin; n=1; Helianthus annuus|Rep: Unconventional myosin - Helianthus annuus (Common sunflower), partial (14%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2259630.1 |
length: 264 aa. |
| IPR000048 |
IQ motif, EF-hand binding site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00612 |
IQ |
1.3e-05 |
15-31 |
| ProfileScan |
PS50096 |
IQ |
7.364 |
13-42 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
59-108 |
| HMMPanther |
PTHR13140 |
MYOSIN |
7.8e-26 |
1-248 |
| HMMPanther |
PTHR13140:SF37 |
MYOSIN |
7.8e-26 |
1-248 |
| Seg |
seg |
seg |
NA |
242-253 |
- Wolf-PSORT
Lj5g3v2259630.1 chlo 8, nucl 4, mito 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2259630.1 |
|