Miyakogusa Predicted Gene
- Lj5g3v2259630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v2259630.1 tr|C1E4J1|C1E4J1_MICSR Predicted protein
(Fragment) OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MI,32.37,2e-17,IQ,IQ motif, EF-hand binding site; MYOSIN VIII,NULL;
MYOSIN,NULL; seg,NULL; coiled-coil,NULL,CUFF.57105.1
(264 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO... 369 e-102
AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FO... 368 e-102
AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleo... 335 2e-92
AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220... 155 4e-38
AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 | chr5:220... 154 6e-38
AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleo... 141 5e-34
>AT3G19960.1 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD
LENGTH=1166
Length = 1166
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/269 (74%), Positives = 214/269 (79%), Gaps = 9/269 (3%)
Query: 1 MKTVIARNGMKTTNDAAVVIQSFIRGWLVRRFSGDIGLLKSGGMKTNESDEVLVKSSFLA 60
+K+ IAR K DA+VVIQS IRGWLVRR SGDIG LKSGG KTNE EVLVK+S L+
Sbjct: 899 VKSKIARIQYKGIADASVVIQSAIRGWLVRRCSGDIGWLKSGGAKTNELGEVLVKASVLS 958
Query: 61 ELQRRVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLS 120
ELQRRVLKAEA LREKEEENDIL QRLQQYE+RWSEYE KMKSMEE+WQKQMRSLQSSLS
Sbjct: 959 ELQRRVLKAEAALREKEEENDILQQRLQQYENRWSEYETKMKSMEEIWQKQMRSLQSSLS 1018
Query: 121 IAKKSLAMDDSERNSDASVNASDEREYSWDVGSNHSR-QEINGTRS----MSACLSVISR 175
IAKKSLA++DS RNSDASVNASD + WD SN R Q NG S MSA LSVI R
Sbjct: 1019 IAKKSLAVEDSARNSDASVNASDATD--WDSSSNQFRSQTSNGVGSRLQPMSAGLSVIGR 1076
Query: 176 LAEEFEQRSQVFGDDAKFLVEVKSGQIEASLDPDQELRRLKQMFEAWKKDYSGRLRETKL 235
LAEEFEQR+QVFGDDAKFLVEVKSGQ+EA+LDPD+ELRRLKQMFE WKKDY GRLRETKL
Sbjct: 1077 LAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRLKQMFETWKKDYGGRLRETKL 1136
Query: 236 ILHKLGX--XXXXXXXXXXXWWVRRNSTR 262
IL KLG WW RRNSTR
Sbjct: 1137 ILSKLGSEESSGSMEKVKRKWWGRRNSTR 1165
>AT3G19960.2 | Symbols: ATM1 | myosin 1 | chr3:6949787-6956736 FORWARD
LENGTH=1176
Length = 1176
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/269 (74%), Positives = 214/269 (79%), Gaps = 9/269 (3%)
Query: 1 MKTVIARNGMKTTNDAAVVIQSFIRGWLVRRFSGDIGLLKSGGMKTNESDEVLVKSSFLA 60
+K+ IAR K DA+VVIQS IRGWLVRR SGDIG LKSGG KTNE EVLVK+S L+
Sbjct: 909 VKSKIARIQYKGIADASVVIQSAIRGWLVRRCSGDIGWLKSGGAKTNELGEVLVKASVLS 968
Query: 61 ELQRRVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLS 120
ELQRRVLKAEA LREKEEENDIL QRLQQYE+RWSEYE KMKSMEE+WQKQMRSLQSSLS
Sbjct: 969 ELQRRVLKAEAALREKEEENDILQQRLQQYENRWSEYETKMKSMEEIWQKQMRSLQSSLS 1028
Query: 121 IAKKSLAMDDSERNSDASVNASDEREYSWDVGSNHSR-QEINGTRS----MSACLSVISR 175
IAKKSLA++DS RNSDASVNASD + WD SN R Q NG S MSA LSVI R
Sbjct: 1029 IAKKSLAVEDSARNSDASVNASDATD--WDSSSNQFRSQTSNGVGSRLQPMSAGLSVIGR 1086
Query: 176 LAEEFEQRSQVFGDDAKFLVEVKSGQIEASLDPDQELRRLKQMFEAWKKDYSGRLRETKL 235
LAEEFEQR+QVFGDDAKFLVEVKSGQ+EA+LDPD+ELRRLKQMFE WKKDY GRLRETKL
Sbjct: 1087 LAEEFEQRAQVFGDDAKFLVEVKSGQVEANLDPDRELRRLKQMFETWKKDYGGRLRETKL 1146
Query: 236 ILHKLGX--XXXXXXXXXXXWWVRRNSTR 262
IL KLG WW RRNSTR
Sbjct: 1147 ILSKLGSEESSGSMEKVKRKWWGRRNSTR 1175
>AT1G50360.1 | Symbols: VIIIA, ATVIIIA | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:18650688-18657106 FORWARD LENGTH=1153
Length = 1153
Score = 335 bits (858), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/260 (68%), Positives = 202/260 (77%), Gaps = 4/260 (1%)
Query: 5 IARNGMKTTNDAAVVIQSFIRGWLVRRFSGDIGLLKSGGMKTNESDEVLVKSSFLAELQR 64
IA K T DA+ VIQS IRG LVRR +GDIG L SGG K NESDEVLVK+S+L++LQR
Sbjct: 895 IASQQYKATVDASAVIQSAIRGELVRRCAGDIGWLSSGGTKRNESDEVLVKASYLSDLQR 954
Query: 65 RVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKK 124
RVL+ EA LREKEEENDIL QR+QQY++RWSEYE KMKSMEE+WQKQM+SLQSSLSIAKK
Sbjct: 955 RVLRTEAALREKEEENDILRQRVQQYDNRWSEYETKMKSMEEIWQKQMKSLQSSLSIAKK 1014
Query: 125 SLAMDDSERNSDASVNASDEREYSWDVGSNHSRQEINGTRSMSACLSVISRLAEEFEQRS 184
SL ++DS RNSDASVNASD + D G +H + +RS+ LSVISRLAEEF QR+
Sbjct: 1015 SLEVEDSARNSDASVNASDATD--LDSGGSHYQMGHGRSRSVGVGLSVISRLAEEFGQRA 1072
Query: 185 QVFGDDAKFLVEVKSGQIEASLDPDQELRRLKQMFEAWKKDYSGRLRETKLILHKLGXXX 244
QVFGDD KFL+EVKSGQ+EA+L+PD+ELRRLKQMFE WKKDY GRLRETKLIL KLG
Sbjct: 1073 QVFGDDRKFLMEVKSGQVEANLNPDRELRRLKQMFETWKKDYGGRLRETKLILSKLGSEE 1132
Query: 245 X--XXXXXXXXWWVRRNSTR 262
WW R STR
Sbjct: 1133 TGGSAEKVKMNWWGRLRSTR 1152
>AT5G54280.2 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
chr5:22039606-22045592 REVERSE LENGTH=1220
Length = 1220
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 148/262 (56%), Gaps = 38/262 (14%)
Query: 16 AAVVIQSFIRGWLVRRFSGDIGLLK-----------SGGMKTNESDEVL-----VKSSFL 59
A + +QS +RGWL R+ + K G + +E ++ V+ + +
Sbjct: 945 AVIHLQSAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRRISEDKDIPLEQPQVQPTSM 1004
Query: 60 AELQRRVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSL 119
++LQ+R+LK+EA L +KEEEN L ++L+Q+E RWSEY++KMKSMEE WQKQM SLQ SL
Sbjct: 1005 SDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMSSLQMSL 1064
Query: 120 SIAKKSLAMDDSERNS----DASVNA-SDEREYSWDVGSNHSRQEING----------TR 164
+ A+KSLA + + D S++ + E + G+ R N R
Sbjct: 1065 AAARKSLAAESITGQAGGRQDTSISPFGYDSEDTMSTGTPGVRTPTNKFTNGNTPELRIR 1124
Query: 165 SMSACLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQIEASLD------PDQELRRLKQM 218
++ L+ ++ LA EF+QR F +DA+ +VEVK G +A+ + P+ E RRLK
Sbjct: 1125 ELNGSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGP-QATPNGQQQQHPEDEFRRLKLR 1183
Query: 219 FEAWKKDYSGRLRETKLILHKL 240
FE WKKDY RLR+TK LH++
Sbjct: 1184 FETWKKDYKARLRDTKARLHRV 1205
>AT5G54280.1 | Symbols: ATM2, ATMYOS1, ATM4 | myosin 2 |
chr5:22039606-22044715 REVERSE LENGTH=1030
Length = 1030
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 148/262 (56%), Gaps = 38/262 (14%)
Query: 16 AAVVIQSFIRGWLVRRFSGDIGLLK-----------SGGMKTNESDEVL-----VKSSFL 59
A + +QS +RGWL R+ + K G + +E ++ V+ + +
Sbjct: 755 AVIHLQSAVRGWLARKHFNSMQRQKELRNVATKSKRKAGRRISEDKDIPLEQPQVQPTSM 814
Query: 60 AELQRRVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSL 119
++LQ+R+LK+EA L +KEEEN L ++L+Q+E RWSEY++KMKSMEE WQKQM SLQ SL
Sbjct: 815 SDLQKRILKSEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMSSLQMSL 874
Query: 120 SIAKKSLAMDDSERNS----DASVNA-SDEREYSWDVGSNHSRQEING----------TR 164
+ A+KSLA + + D S++ + E + G+ R N R
Sbjct: 875 AAARKSLAAESITGQAGGRQDTSISPFGYDSEDTMSTGTPGVRTPTNKFTNGNTPELRIR 934
Query: 165 SMSACLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQIEASLD------PDQELRRLKQM 218
++ L+ ++ LA EF+QR F +DA+ +VEVK G +A+ + P+ E RRLK
Sbjct: 935 ELNGSLNAVNHLAREFDQRRLNFDEDARAIVEVKLGP-QATPNGQQQQHPEDEFRRLKLR 993
Query: 219 FEAWKKDYSGRLRETKLILHKL 240
FE WKKDY RLR+TK LH++
Sbjct: 994 FETWKKDYKARLRDTKARLHRV 1015
>AT4G27370.1 | Symbols: VIIIB, ATVIIIB | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr4:13694881-13700780 REVERSE LENGTH=1134
Length = 1134
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 126/242 (52%), Gaps = 43/242 (17%)
Query: 15 DAAVVIQSFIRGWLVRRFSGDIGLLKSGGMK-----------------TNESDEVL---- 53
DAA+ +Q +R WL R+ LL S K +E E+L
Sbjct: 893 DAAIHLQYMVRKWLARK------LLNSTQQKNKPRNEKKKTRRKSTKRVSEDKELLSEQF 946
Query: 54 -VKSSFLAELQRRVLKAEAGLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQM 112
V+ LA+LQ RVLK EA + +KE+EN L + LQ++E RW E E +MKSME+ WQK M
Sbjct: 947 EVQPCVLADLQSRVLKVEAAIMQKEDENTALQEELQRFEERWLENETRMKSMEDTWQKHM 1006
Query: 113 RSLQSSLSIAKKSLAMDDSERNSDASVNASDEREYSWDVGSNHSRQEINGTRSMSACLSV 172
S+Q SL+ A K LA D + AS E S+ T+ + LS
Sbjct: 1007 SSMQMSLAAACKVLAPDKT-----ASHGTDSEDTMSFGT----------PTKELKGSLSD 1051
Query: 173 ISRLAEEFEQRSQVFGDDAKFLVEVKSGQIEASLDPDQELRRLKQMFEAWKKDYSGRLRE 232
++ L+ EF+QRS + +D K LVEVKS I +ELRRLK FE WKKDY RLRE
Sbjct: 1052 VNNLSTEFDQRSVIIHEDPKSLVEVKSDSISNRKQHAEELRRLKSRFEKWKKDYKTRLRE 1111
Query: 233 TK 234
TK
Sbjct: 1112 TK 1113