Miyakogusa Predicted Gene

Lj5g3v1853240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SQZ7_LOTJA 634 89.3 89.3 (tr|I3SQZ7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G22700.2 298 69.3 80.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:8028323-8029878 REVERSE LENGTH=296
Medicago Medtr1g096230.1 451 73.5 83.0 | TPR protein | HC | chr1:43325249-43321503 | 20130731
Soybean Glyma10g35950.1 452 67.2 74.6  
LJGI gnl|LJGI|TC70893 1923 100.0 100.0 similar to UniRef100_A7Q7D6 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1853240.1 length: 347 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.9e-22 214-322
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 22.229 214-319
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 2.2e-07 214-247
252-285
286-319
ProfileScan PS50005 TPR 13.216 252-285
286-319
no_ID  
HMMPanther PTHR23083 TETRATRICOPEPTIDE 6.8e-72 82-337
HMMPanther PTHR23083:SF164RESPONSE REGULATOR 6.8e-72 82-337
HMMPfam PF13414 TPR_11 1.6e-13 251-317
Seg seg seg NA 9-26
165-182
superfamily SSF48452 TPR-like 8.9e-22 205-337
Wolf-PSORT
Lj5g3v1853240.1	chlo 11, nucl 1, extr 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1853240.1