Miyakogusa Predicted Gene

Lj5g3v1853240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1853240.1 tr|Q8YRL6|Q8YRL6_NOSS1 Alr3430 protein OS=Nostoc
sp. (strain PCC 7120 / UTEX 2576) GN=alr3430 PE=4
S,32.75,1e-18,TPR-like,NULL; TPR_11,NULL; seg,NULL; no
description,Tetratricopeptide-like helical;
Tetratricopepti,CUFF.56058.1
         (347 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22700.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   298   4e-81
AT1G22700.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   298   5e-81
AT1G22700.3 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   286   2e-77
AT3G11540.1 | Symbols: SPY | Tetratricopeptide repeat (TPR)-like...    55   9e-08

>AT1G22700.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:8028323-8029878 REVERSE
           LENGTH=296
          Length = 296

 Score =  298 bits (763), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/212 (69%), Positives = 170/212 (80%), Gaps = 2/212 (0%)

Query: 129 SAFLFGQTISLIS--PDVSYASSSVKINEIYEVGELFDXXXXXXXXXXXXXXXXXXTFYV 186
           S FL GQ++ ++S  P ++ A+  +K   IYEVGELF+                  TFYV
Sbjct: 76  STFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLLGVGTFYV 135

Query: 187 IRQVLVRRELDLSAKELQEQVRSGDASAIGLFELGAVMLRRKFYPAATKYLLQAIEKWDG 246
           IRQVLVRRELDLSAKELQEQVRSGDASA  LFELGAVMLRRKFYPAA K+L QAI+KWDG
Sbjct: 136 IRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQAIQKWDG 195

Query: 247 ENQDLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDYKSAL 306
           ++QDLAQV+NALGVSYVR+ KL+KGIAQFE AVK+QPGYVTAWNNLGDAYE KK+   AL
Sbjct: 196 DDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKKKELPLAL 255

Query: 307 KAFEEVLLFDPNNQIAQPRRDALKDLVQMYKG 338
            AFEEVLLFDPNN++A+PRRDALKD V++YKG
Sbjct: 256 NAFEEVLLFDPNNKVARPRRDALKDRVKLYKG 287


>AT1G22700.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:8028323-8029878 REVERSE
           LENGTH=301
          Length = 301

 Score =  298 bits (762), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 147/212 (69%), Positives = 170/212 (80%), Gaps = 2/212 (0%)

Query: 129 SAFLFGQTISLIS--PDVSYASSSVKINEIYEVGELFDXXXXXXXXXXXXXXXXXXTFYV 186
           S FL GQ++ ++S  P ++ A+  +K   IYEVGELF+                  TFYV
Sbjct: 81  STFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLLGVGTFYV 140

Query: 187 IRQVLVRRELDLSAKELQEQVRSGDASAIGLFELGAVMLRRKFYPAATKYLLQAIEKWDG 246
           IRQVLVRRELDLSAKELQEQVRSGDASA  LFELGAVMLRRKFYPAA K+L QAI+KWDG
Sbjct: 141 IRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQAIQKWDG 200

Query: 247 ENQDLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDYKSAL 306
           ++QDLAQV+NALGVSYVR+ KL+KGIAQFE AVK+QPGYVTAWNNLGDAYE KK+   AL
Sbjct: 201 DDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKKKELPLAL 260

Query: 307 KAFEEVLLFDPNNQIAQPRRDALKDLVQMYKG 338
            AFEEVLLFDPNN++A+PRRDALKD V++YKG
Sbjct: 261 NAFEEVLLFDPNNKVARPRRDALKDRVKLYKG 292


>AT1G22700.3 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:8028323-8029289 REVERSE
           LENGTH=211
          Length = 211

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 141/197 (71%), Positives = 160/197 (81%)

Query: 142 PDVSYASSSVKINEIYEVGELFDXXXXXXXXXXXXXXXXXXTFYVIRQVLVRRELDLSAK 201
           P ++ A+  +K   IYEVGELF+                  TFYVIRQVLVRRELDLSAK
Sbjct: 6   PQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLLGVGTFYVIRQVLVRRELDLSAK 65

Query: 202 ELQEQVRSGDASAIGLFELGAVMLRRKFYPAATKYLLQAIEKWDGENQDLAQVHNALGVS 261
           ELQEQVRSGDASA  LFELGAVMLRRKFYPAA K+L QAI+KWDG++QDLAQV+NALGVS
Sbjct: 66  ELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYNALGVS 125

Query: 262 YVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDYKSALKAFEEVLLFDPNNQI 321
           YVR+ KL+KGIAQFE AVK+QPGYVTAWNNLGDAYE KK+   AL AFEEVLLFDPNN++
Sbjct: 126 YVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFDPNNKV 185

Query: 322 AQPRRDALKDLVQMYKG 338
           A+PRRDALKD V++YKG
Sbjct: 186 ARPRRDALKDRVKLYKG 202


>AT3G11540.1 | Symbols: SPY | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:3632842-3637547 FORWARD
           LENGTH=914
          Length = 914

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 40/77 (51%)

Query: 250 DLAQVHNALGVSYVRDGKLEKGIAQFETAVKIQPGYVTAWNNLGDAYESKKDYKSALKAF 309
           + AQ  N LGV Y   GK++   +  E A+   P Y  A+NNLG  Y    +   A+ A+
Sbjct: 361 NFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAY 420

Query: 310 EEVLLFDPNNQIAQPRR 326
           EE L  DP+++ A   R
Sbjct: 421 EECLKIDPDSRNAGQNR 437