Miyakogusa Predicted Gene

Lj5g3v1427710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KGT9_SOYBN 1306 82.5 90.2 (tr|K7KGT9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G05090.2 1068 69.2 80.8 | Symbols: LRS1 | Transducin/WD40 repeat-like superfamily protein | chr3:1418573-1422723 REVERSE LENGTH=753
Medicago Medtr1g081830.3 1314 82.5 89.3 | transducin/WD40 repeat protein | HC | chr1:36423916-36438661 | 20130731
Soybean Glyma19g43070.1 1293 82.2 90.3  
LJGI gnl|LJGI|TC67160 1213 87.8 87.8 similar to UniRef100_A7Q5S9 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1427710.1 length: 763 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.015 34-67
75-111
116-155
215-246
253-288
293-328
HMMSmart SM00320 WD40 0.0018 19-68
73-111
115-155
207-246
249-288
291-330
ProfileScan PS50082 WD_REPEATS_2 14.585 122-164
214-255
256-297
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.1e-61 425-449
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 37.149 31-339
superfamily SSF50978 WD40 6e-57 35-454
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 98-112
275-289
IPR020472 G-protein beta WD-40 repeat
FPrintScan PR00320 GPROTEINBRPT 6.1e-06 98-112
233-247
275-289
IPR021772 Protein of unknown function DUF3337
HMMPfam PF11816 DUF3337 1.8e-64 424-759
no_ID  
HMMPanther PTHR19862 FAMILY 0 1-758
HMMPanther PTHR19862:SF5 SUBFAMILY 0 1-758
Seg seg seg NA 184-200
Wolf-PSORT
Lj5g3v1427710.1	nucl 7, chlo 3, mito 3, chlo_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1427710.1