Miyakogusa Predicted Gene
- Lj5g3v1427710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1427710.1 Non Chatacterized Hit- tr|B9REV1|B9REV1_RICCO
Nucleotide binding protein, putative OS=Ricinus
commun,81.02,0,WD_REPEATS_1,WD40 repeat, conserved site; WD40
repeats,WD40 repeat; seg,NULL; SUBFAMILY NOT NAMED,NU,CUFF.55464.1
(2295 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67160 similar to UniRef100_A7Q5S9 Cluster: Chromosome... 1213 0.0
gnl|LJGI|TC76759 similar to UniRef100_A7Q5S9 Cluster: Chromosome... 595 e-169
gnl|LJGI|TC64119 462 e-129
gnl|LJGI|TC68448 190 3e-47
>gnl|LJGI|TC67160 similar to UniRef100_A7Q5S9 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 1341
Score = 1213 bits (612), Expect = 0.0
Identities = 1040/1185 (87%)
Strand = Plus / Plus
Query: 1 atgcaccgcgtgggtagtgcagggaacacaaacagttcaactcgcccgcgtaaggagaag 60
|||||||||||||||||||| || ||||||| || |||||||||||| ||||||||||||
Sbjct: 118 atgcaccgcgtgggtagtgcgggtaacacaagcaattcaactcgccctcgtaaggagaag 177
Query: 61 agattaacatatgtgttgaatgattctgatgacacaaagcattgcgcaggcataaattgt 120
||||| || |||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 178 agatttacctatgtgttgaatgattctgatggtacaaagcattgtgcaggcataaattgt 237
Query: 121 ttggccgtacttaagtctgcagtatctgatgggtctgattatctcttcactgggagccgt 180
||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttggctctacttacatctgcggcatctgatgggtctgattatctcttcactgggagccgt 297
Query: 181 gatggcaggctaaaacggtgggcactaggtgaggatgcagcaacatgctctgctaccttt 240
||||| ||||||||||| ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 298 gatggaaggctaaaacgatgggcgctggctgaggatgcagtgacatgctctgctaccttt 357
Query: 241 gaatctcatgtggactgggttaatgatgccgttcttgtgggtgatagtacccttgtttct 300
|||||||||||||| |||||||||||||| |||||||| ||||||| ||| || ||||||
Sbjct: 358 gaatctcatgtggattgggttaatgatgctgttcttgttggtgataatacactcgtttct 417
Query: 301 tgttcgtcagatacaacccttaagacatgggatgccttttccactggaacatgtactagg 360
||||| ||||||||||| |||||||||||| ||||||| || |||| | ||||| |||
Sbjct: 418 tgttcttcagatacaactcttaagacatggaatgccttctctgttggatcttgtaccagg 477
Query: 361 acgctccgccaacactcagattatgttacttgccttgcagcatctgnnnnnnntagcaat 420
||||||||||||||||| ||||| |||||||| ||||||||| | | | |||||
Sbjct: 478 acgctccgccaacactctgattacgttacttgtcttgcagcagcaggaaaaaattgcaat 537
Query: 421 attgttgcctctggtggcctcggtggagaggttttcgtatgggatcttgaagctgcacat 480
|||||||||||||||||||| ||||| |||||||| |||||||||| |||| ||| | |
Sbjct: 538 attgttgcctctggtggccttggtggggaggtttttatatgggatctcgaaggtgcgctt 597
Query: 481 gcttcagctgcaaagtgcattgatgctacggatgatgatacttcaaatggtatcaatggt 540
||| ||| | ||||||| ||||||| ||| |||||| | |||||||| |||||||||
Sbjct: 598 gctccagtctctaagtgcaatgatgctgcggttgatgaatcctcaaatgggatcaatggt 657
Query: 541 tctgggaactcattaccattgactagcttacgtagcatcagctcaagtaacagtatatct 600
||||| |||||| |||| ||| | | | |||||| ||||||||||| || ||||||||
Sbjct: 658 tctggcaactcactacctttgtcaaacatacgtactatcagctcaagcaatagtatatcc 717
Query: 601 gtgcacactactcaaaatcaaggatacattccaattgctgctaaaggccataaggaatct 660
||||||||||||| || ||| || ||||||||||||||||| ||||| |||||||| |||
Sbjct: 718 gtgcacactactccaactcaggggtacattccaattgctgccaaaggacataaggagtct 777
Query: 661 gtttatgcattggcaatgaatgaaggtggaacacttcttgtctctggtggtacagaaaag 720
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 778 gtttatgcattggcaatgaatgaaggtggaacagttcttgtctctggtggcacagaaaag 837
Query: 721 gttgtgcgtgtttgggatccaagatctggatcaaagactatgaaactaaaagggcataca 780
||| | ||||| ||||| |||||||| |||||||||||| | || |||| ||||||| ||
Sbjct: 838 gttattcgtgtctgggacccaagatcaggatcaaagactttaaagctaagagggcatgca 897
Query: 781 gataacatcagggctttgcttctggattctactggcaggttttgtttatcaggatcttca 840
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 898 gataacatcagggccctgcttctggattctactggcaggtattgtttatcaggatcttca 957
Query: 841 gactccatgataaggctttgggatcttggtcagcaacgttgcttgcattcttatgccgtt 900
||||| |||||||||||||||||| | ||||||| | | || |||||| ||||||| |||
Sbjct: 958 gactctatgataaggctttgggatataggtcagccaagatgtttgcatacttatgctgtt 1017
Query: 901 cacacagattctgtgtgggctcttgcttgcacttcaacatttagtcatgtttatagtggt 960
|| ||||||||||| ||||| ||||| |||| | |||||||||||||||||||| |||
Sbjct: 1018 catacagattctgtttgggcccttgccagcacccccacatttagtcatgtttatagcggt 1077
Query: 961 ggtagagacttctcgttatacttgacagacttgcagacaagagagagcgttttgctttgc 1020
|| |||||||| || |||||||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 1078 gggagagacttttcattatacttgacagacttgcaaacaagagagagtagtttactttgc 1137
Query: 1021 actggcgaacaccctatttgtcaattggctttgcatgatgatagcatatgggttgcatca 1080
|| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1138 acaggcgagcaccctattcgtcaattggctttgcatgatgatagcatatgggttgcatca 1197
Query: 1081 acagattcttcagttcatagattgcctgctgaaggacgaaatcctcaaaagattttccaa 1140
|| |||||||||||||||| || ||||||||||||| || |||||||||||||||| |
Sbjct: 1198 acggattcttcagttcataaatggcctgctgaaggatccaaccctcaaaagattttccta 1257
Query: 1141 agaggcaattcttttttagctggaaatttgtcatattcaagagca 1185
|||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 1258 agaggcaattcttttttagctggaaacttgtcattttcaagagca 1302
>gnl|LJGI|TC76759 similar to UniRef100_A7Q5S9 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 609
Score = 595 bits (300), Expect = e-169
Identities = 309/312 (99%)
Strand = Plus / Plus
Query: 1 atgcaccgcgtgggtagtgcagggaacacaaacagttcaactcgcccgcgtaaggagaag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 157 atgcaccgcgtgggtagtgcagggaacacaaacagttcaactcacccgcgtaaggagaag 216
Query: 61 agattaacatatgtgttgaatgattctgatgacacaaagcattgcgcaggcataaattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 agattaacatatgtgttgaatgattctgatgacacaaagcattgcgcaggcataaattgt 276
Query: 121 ttggccgtacttaagtctgcagtatctgatgggtctgattatctcttcactgggagccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ttggccgtacttaagtctgcagtatctgatgggtctgattatctcttcactgggagccgt 336
Query: 181 gatggcaggctaaaacggtgggcactaggtgaggatgcagcaacatgctctgctaccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gatggcaggctaaaacggtgggcactaggtgaggatgcagcaacatgctctgctaccttt 396
Query: 241 gaatctcatgtggactgggttaatgatgccgttcttgtgggtgatagtacccttgtttct 300
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 397 gaagctcatgtggactgggttaatgatgcagttcttgtgggtgatagtacccttgtttct 456
Query: 301 tgttcgtcagat 312
||||||||||||
Sbjct: 457 tgttcgtcagat 468
Score = 250 bits (126), Expect = 3e-65
Identities = 140/147 (95%)
Strand = Plus / Plus
Query: 376 tcagattatgttacttgccttgcagcatctgnnnnnnntagcaatattgttgcctctggt 435
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 463 tcagattatgttacttgccttgcagcatctgaaaaaaatagcaatattgttgcctctggt 522
Query: 436 ggcctcggtggagaggttttcgtatgggatcttgaagctgcacatgcttcagctgcaaag 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggcctcggtggagaggttttcgtatgggatcttgaagctgcacatgcttcagctgcaaag 582
Query: 496 tgcattgatgctacggatgatgatact 522
|||||||||||||||||||||||||||
Sbjct: 583 tgcattgatgctacggatgatgatact 609
>gnl|LJGI|TC64119
Length = 936
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Plus
Query: 2063 atgttaatttcccccctggaattggtgggtcacagtcacagctccatgcaattggggatg 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgttaatttcccccctggaattggtgggtcacagtcacagctccatgcaattggggatg 60
Query: 2123 gatctttccgatctgggttgaaaccttggcaaaagattagaccttctattgagatattgt 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatctttccgatctgggttgaaaccttggcaaaagattagaccttctattgagatattgt 120
Query: 2183 gcaacaaccaggtattgtctcctgaaatgagcttagctacagtgcgagcttatatatgga 2242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaacaaccaggtattgtctcctgaaatgagcttagctacagtgcgagcttatatatgga 180
Query: 2243 agaagacagatgacctgatcctaaattacagatcaattcaagggaggtgactg 2295
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaagacagatgacctgatcctaaattacagatcaattcaagggaggtgactg 233
>gnl|LJGI|TC68448
Length = 675
Score = 190 bits (96), Expect = 3e-47
Identities = 162/184 (88%)
Strand = Plus / Plus
Query: 2091 gtcacagtcacagctccatgcaattggggatggatctttccgatctgggttgaaaccttg 2150
|||||||||||||| | ||| ||||||||||||||||| ||||||| || || || ||
Sbjct: 1 gtcacagtcacagcatctagcagttggggatggatctttcagatctggatttaagccctg 60
Query: 2151 gcaaaagattagaccttctattgagatattgtgcaacaaccaggtattgtctcctgaaat 2210
||||||| ||| ||||||||| || |||||||||||||| ||||| || |||||||||||
Sbjct: 61 gcaaaagcttaaaccttctatcgaaatattgtgcaacaatcaggtgttatctcctgaaat 120
Query: 2211 gagcttagctacagtgcgagcttatatatggaagaagacagatgacctgatcctaaatta 2270
||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 121 gagcttagccacagtacgagcttatatatggaagaaatcagatgacctggtcctaaatta 180
Query: 2271 caga 2274
||||
Sbjct: 181 caga 184