Miyakogusa Predicted Gene

Lj5g3v1276100.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NIJ3_SOYBN 672 81.5 87.3 (tr|I1NIJ3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G02830.1 455 58.6 68.2 | Symbols: ZFN1 | zinc finger protein 1 | chr3:614075-615916 FORWARD LENGTH=397
Medicago Medtr7g079840.1 639 77.8 84.8 | zinc finger CCCH domain protein | HC | chr7:30331631-30324378 | 20130731
Soybean Glyma20g36140.1 672 81.5 87.3  
LJGI gnl|LJGI|TC69422 708 82.5 82.5 similar to UniRef100_Q2HW14 Cluster: Zinc finger, CCCH-type; Sugar transporter superfamily; n=1; Medicago truncatula|Rep: Zinc finger, CCCH-type; Sugar transporter superfamily - Medicago truncatula (Barrel medic), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1276100.1 length: 402 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00059 69-91
115-135
HMMPfam PF00642 zf-CCCH 8.6e-10 19-45
66-90
112-136
263-289
309-335
HMMSmart SM00356 zinc 1.4e-07 18-45
63-90
109-136
262-289
308-335
ProfileScan PS50103 ZF_C3H1 14.821 18-46
63-91
109-137
262-290
308-336
no_ID  
HMMPanther PTHR12506 PROTEIN 1.7e-138 2-351
HMMPanther PTHR12506:SF11 ZINC 1.7e-138 2-351
Seg seg seg NA 300-313
394-401
superfamily SSF90229 CCCH 8.3e-05 104-143
58-97
257-296
303-342
13-52
Wolf-PSORT
Lj5g3v1276100.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1276100.1