Miyakogusa Predicted Gene
- Lj5g3v1276100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1276100.1 Non Chatacterized Hit- tr|D8TDW9|D8TDW9_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,44.94,5e-18,zinc finger,Zinc finger, CCCH-type;
ZF_C3H1,Zinc finger, CCCH-type; ZINC FINGER CCCH
DOMAIN-CONTAINI,CUFF.55109.1
(1212 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69422 similar to UniRef100_Q2HW14 Cluster: Zinc finge... 708 0.0
gnl|LJGI|AW164137 similar to UniRef100_A7PV92 Cluster: Chromosom... 706 0.0
gnl|LJGI|TC66448 homologue to UniRef100_Q9SWF9 Cluster: Zinc fin... 452 e-126
>gnl|LJGI|TC69422 similar to UniRef100_Q2HW14 Cluster: Zinc finger, CCCH-type; Sugar
transporter superfamily; n=1; Medicago truncatula|Rep:
Zinc finger, CCCH-type; Sugar transporter superfamily -
Medicago truncatula (Barrel medic), partial (93%)
Length = 1675
Score = 708 bits (357), Expect = 0.0
Identities = 929/1126 (82%), Gaps = 39/1126 (3%)
Strand = Plus / Plus
Query: 10 ttgaggtcaagtgaagcaatggaatctgggccttatccgcagcgtcccggggagccagat 69
||||||||||||||| ||||||| || || |||||||| ||| ||| || || ||||||
Sbjct: 166 ttgaggtcaagtgaaacaatggattcaggtccttatcctgagcatccaggagaaccagat 225
Query: 70 tgttcatattacatcagaacaggcctttgcagatttggtgctacatgtcggtttaatcat 129
|||||||||||||||||||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 226 tgttcatattacatcagaactggcctttgtagatttggagcaacatgtcgatttaatcac 285
Query: 130 ccccctaacaggaagctggttattgccactgcaaggatgatgggcgagttcccagaaaga 189
|| || ||||||| |||| ||||||| ||||| |||||| |||||||||||||||||
Sbjct: 286 cctccgaacaggagactggctattgccgctgcacggatgaaaggcgagttcccagaaagg 345
Query: 190 atagggcaaccagaatgtcagtactatctgaagacaggaacttgcaaatttggagcaaca 249
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 346 atagggcagccagaatgtcagtactatctgaaaacaggaacttgcaaatttggagccact 405
Query: 250 tgcaaatttcatcatcctagagaccaagctgggattgctggaagagttgccttaaatatt 309
|||| |||||||||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 406 tgcagatttcatcatcctaaagatagggctgggattgctggaagagttgccttgaatatt 465
Query: 310 ttaggctatcctctccgccctaacgaatcagaatgcacatattatttgagaacaggacaa 369
|||||||||||||||||||| || || | |||||| |||||||||| ||||| ||||||
Sbjct: 466 ttaggctatcctctccgcccaaatgagcctgaatgcgcatattattttagaaccggacaa 525
Query: 370 tgcaaattcgggaacacttgcaaattcaaccatccccaaccaagtaatatgatgctttca 429
|||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 526 tgcaaatttgggaacacttgcaaatttcaccatcctcaaccaagtaatatggtgctttca 585
Query: 430 ttacgaggttctccagtttattctgcagtccattctcctactacacttggtcagcagtca 489
| | ||||| | |||||| || | ||||| ||||| || || | |||||||||||
Sbjct: 586 atgcagagttctgctgtttatcctaccgtccaatctccaacaacgccaggtcagcagtcg 645
Query: 490 tatacaggaggaattacaaattggccgagggcatcttatgttcatagtccacgctggcaa 549
||| ||| ||| |||||||||||| | || |||| ||| | | ||||||||||||||||
Sbjct: 646 tatgcagcagggattacaaattggtctagttcatcctatatccctagtccacgctggcaa 705
Query: 550 ggcccttcaagttatacacctttaattctacctcaggggatggtttcagtgcctggatgg 609
||||||||||||||| |||| |||||||||||||| || |||||||||||||||| |||
Sbjct: 706 ggcccttcaagttatgcacccttaattctacctcaaggagtggtttcagtgcctgggtgg 765
Query: 610 t---cctacagtggtcatatgggatcaatctctacttcagacagtccacagcaatcaatg 666
| |||| |||||| |||||| || ||||||||||||||| |||||
Sbjct: 766 agtgcgtacaatggtcaaatgggacca------------gacagtccacagcaaacaatg 813
Query: 667 ggaaatgat---------------------caaggtgaactagaaaatgccggatctcat 705
||||||||| |||||||| | ||||||| | ||||| ||
Sbjct: 814 ggaaatgatcaagcctatggaacttctcgccaaggtgatccagaaaatacaggatcacaa 873
Query: 706 ggagcatattctcaattccgtgctggaactattcctgtagggtattatgcgttgcagagg 765
|| |||||||||||||||||| |||| || | |||||||| | || |||||| || ||
Sbjct: 874 ggggcatattctcaattccgttctggctctgtacctgtaggattctacgcgttggagggg 933
Query: 766 gagagcatatttcctgagagacctggtcagcctgaatgtcaattctatatgaagacagga 825
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||| || |||
Sbjct: 934 gagaacatatttcctgagagacctggtcagcctgaatgccagttctacatgaaaaccgga 993
Query: 826 gattgcaagtttggtgcagtctgtcggttccaccacccacgtgatagacaaattccagct 885
||||| ||||| |||||||||||||| ||||| || |||||||| || ||||| |||
Sbjct: 994 gattgtaagttcggtgcagtctgtcgtttccatcatccacgtgagagggcgattcctgct 1053
Query: 886 cctgattgtatcttgagtcccctaggccttcctttacgtcctggagagcctttgtgtgtc 945
||||| || || |||||||| || ||||||||| ||||||||||||| ||||||||||||
Sbjct: 1054 cctgactgcattttgagtccacttggccttcctctacgtcctggagaacctttgtgtgtc 1113
Query: 946 ttttattcacgctatggcatatgcaaatttggcccaagttgcaaatttgaccacccaatg 1005
|| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1114 ttctattcacgttacggcatatgcaaatttggcccaagttgcaagtttgatcacccaatg 1173
Query: 1006 ggagtattcacgtataatatatctgcaccgccttcagcggatgctcctggcaggcgtctg 1065
||| | ||| | || || ||||||||||| ||||| || || || | || |||||||
Sbjct: 1174 ggaatcttcgcctacaacatatctgcaccaccttcggctgacgcctcaggacggcgtctt 1233
Query: 1066 ttagg---atcttcatcgggaacggctgcattaaatttatcatcag 1108
|| || || ||||||||||| ||||| ||||||||||||||||
Sbjct: 1234 ttgggttcgtcatcatcgggaaccgctgcgttaaatttatcatcag 1279
>gnl|LJGI|AW164137 similar to UniRef100_A7PV92 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 371
Score = 706 bits (356), Expect = 0.0
Identities = 370/372 (99%), Gaps = 2/372 (0%)
Strand = Plus / Plus
Query: 687 agaaaatgccggatctcatggagcatattctcaattccgtgctggaactattcctgtagg 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaatgccggatctcatggagcatattctcaattccgtgctggaactattcctgtagg 60
Query: 747 gtattatgcgttgcagagggagagcatatttcctgagagacctggtcagcctgaatgtca 806
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 gtattatgcgttgcagagggagagcatatttcctgagagacctggtc-gcctgaatgtca 119
Query: 807 attctatatgaagacaggagattgcaagtttggtgcagtctgtcggttccaccacccacg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 attctatatgaagacaggagattgcaagtttggtgcagtctgtcggttccaccacccacg 179
Query: 867 tgatagacaaattccagctcctgattgtatcttgagtcccctaggccttcctttacgtcc 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgatagacaaattccagctcctgattgtatcttgagtcccctaggccttcctttacgtcc 239
Query: 927 tggagagcctttgtgtgtcttttattcacgctatggcatatgcaaatttggcccaagttg 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tggagagcctttgtgtgtcttttattcacgctatggcatatgcaaatttggcccaagttg 299
Query: 987 caaatttgaccacccaatgggagtattcacg-tataatatatctgcaccgccttcagcgg 1045
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 300 caaatttgaccacccaatgggagtattcacgttataatatatctgcaccgccttcagcgg 359
Query: 1046 atgctcctggca 1057
||||||||||||
Sbjct: 360 atgctcctggca 371
>gnl|LJGI|TC66448 homologue to UniRef100_Q9SWF9 Cluster: Zinc finger CCCH
domain-containing protein ZFN-like; n=1; Pisum
sativum|Rep: Zinc finger CCCH domain-containing protein
ZFN-like - Pisum sativum (Garden pea), partial (39%)
Length = 698
Score = 452 bits (228), Expect = e-126
Identities = 372/420 (88%)
Strand = Plus / Plus
Query: 10 ttgaggtcaagtgaagcaatggaatctgggccttatccgcagcgtcccggggagccagat 69
||||||||||||||| ||||||| || || |||||||| ||| ||| || || ||||||
Sbjct: 231 ttgaggtcaagtgaaacaatggattcaggtccttatcctgagcatccaggagaaccagat 290
Query: 70 tgttcatattacatcagaacaggcctttgcagatttggtgctacatgtcggtttaatcat 129
|||||||||||||||||||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 291 tgttcatattacatcagaactggcctttgtagatttggagcaacatgtcgatttaatcac 350
Query: 130 ccccctaacaggaagctggttattgccactgcaaggatgatgggcgagttcccagaaaga 189
|| || ||||||| |||| ||||||| ||||| |||||| |||||||||||||||||
Sbjct: 351 cctccgaacaggagactggctattgccgctgcacggatgaaaggcgagttcccagaaagg 410
Query: 190 atagggcaaccagaatgtcagtactatctgaagacaggaacttgcaaatttggagcaaca 249
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 411 atagggcagccagaatgtcagtactatctgaaaacaggaacttgcaaatttggagccact 470
Query: 250 tgcaaatttcatcatcctagagaccaagctgggattgctggaagagttgccttaaatatt 309
|||| |||||||||||||| |||| | |||||||||||||||||||||||||| ||||||
Sbjct: 471 tgcagatttcatcatcctaaagacaaggctgggattgctggaagagttgccttgaatatt 530
Query: 310 ttaggctatcctctccgccctaacgaatcagaatgcacatattatttgagaacaggacaa 369
|||||||||||||||||||| || || | |||||| |||||||||| ||||| ||||||
Sbjct: 531 ttaggctatcctctccgcccaaatgagcctgaatgcgcatattattttagaaccggacaa 590
Query: 370 tgcaaattcgggaacacttgcaaattcaaccatccccaaccaagtaatatgatgctttca 429
|||||||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 591 tgcaaatttgggaacacttgcaaatttcaccatcctcaaccaagtaatatggtgctttca 650