Miyakogusa Predicted Gene

Lj5g3v0805270.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3RZV7_LOTJA 204 83.5 83.5 (tr|I3RZV7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G33180.1 144 73.3 85.6 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | chr2:14066479-14067314 FORWARD LENGTH=166

Medicago Medtr7g105840.1 165 83.3 90.0 | hypothetical protein | HC | chr7:42971930-42973838 | 20130731

Soybean Glyma03g35870.1 169 87.8 93.3

LJGI gnl|LJGI|GO025196 529 99.3 99.3 similar to UniRef100_A7Q2U8 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v0805270.1 length: 121 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 13-31

superfamily SSF117916 Fe-S 5.9e-06 31-110

Wolf-PSORT

Lj5g3v0805270.1 cyto 5, mito 4, cyto_nucl 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v0805270.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3RZV7_LOTJA	204	83.5	83.5	(tr\|I3RZV7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G33180.1	144	73.3	85.6	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 22 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). \| chr2:14066479-14067314 FORWARD LENGTH=166
Medicago	Medtr7g105840.1	165	83.3	90.0	\| hypothetical protein \| HC \| chr7:42971930-42973838 \| 20130731
Soybean	Glyma03g35870.1	169	87.8	93.3
LJGI	gnl\|LJGI\|GO025196	529	99.3	99.3	similar to UniRef100_A7Q2U8 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)

no_ID
Lj5g3v0805270.1				length: 121 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	13-31
superfamily	SSF117916	Fe-S	5.9e-06	31-110