Miyakogusa Predicted Gene

Lj5g3v0574430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M9Q7_SOYBN 1009 84.6 91.3 (tr|I1M9Q7) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=2
TAIR_pep AT3G49600.1 622 55.7 72.4 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Medicago Medtr1g010040.1 986 83.2 91.0 | ubiquitin carboxyl-terminal hydrolase | HC | chr1:1703938-1713526 | 20130731
Soybean Glyma14g17070.1 1008 84.6 91.3  
LJGI gnl|LJGI|TC57665 1413 99.9 99.9 similar to UniRef100_A7P551 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0574430.1 length: 619 aa.
IPR006615 Peptidase C19, ubiquitin-specific peptidase, DUSP domain
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
HMMSmart SM00695 Domain 6.6e-11 68-144
ProfileScan PS51283 DUSP 10.083 50-142
157-259
285-405
no_ID  
Gene3D G3DSA:3.10.20.90 no description 0.00031 510-574
Gene3D G3DSA:3.30.2230.10 no description 5.8e-08 57-137
HMMPanther PTHR24006 FAMILY 5.3e-24 56-130
HMMPanther PTHR24006:SF86 SUBFAMILY 5.3e-24 56-130
superfamily SSF143791 DUSP-like 7.1e-15 45-143
superfamily SSF54236 Ubiquitin-like 3.9e-07 512-578
Wolf-PSORT
Lj5g3v0574430.1	chlo 8, extr 3, nucl 1, plas 1, vacu 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0574430.1