Miyakogusa Predicted Gene

Lj5g3v0574430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0574430.1 tr|I1M9Q7|I1M9Q7_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max PE=3
SV=1,84.57,0,DUSP,Peptidase C19, ubiquitin-specific peptidase, DUSP
domain; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.53294.1
         (619 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g010040.1 | ubiquitin carboxyl-terminal hydrolase | HC | c...   986   0.0  
Medtr1g010040.2 | ubiquitin carboxyl-terminal hydrolase | HC | c...   934   0.0  
Medtr3g108660.1 | ubiquitin carboxyl-terminal hydrolase | HC | c...   920   0.0  
Medtr3g108660.2 | ubiquitin carboxyl-terminal hydrolase | HC | c...   785   0.0  

>Medtr1g010040.1 | ubiquitin carboxyl-terminal hydrolase | HC |
            chr1:1703938-1713526 | 20130731
          Length = 1083

 Score =  986 bits (2549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/564 (83%), Positives = 513/564 (90%)

Query: 56   KQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSHGKVPVSKVASM 115
            ++EVRSVLAEAPVQPLEQPYFWI SDWLRQWAEN+ P+AIDNTS+QCSHGKVPVSKV S 
Sbjct: 520  REEVRSVLAEAPVQPLEQPYFWIYSDWLRQWAENVTPSAIDNTSIQCSHGKVPVSKVTST 579

Query: 116  KRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRESLKQLAREILD 175
            KRLSSKAWD+LLSKYGGGP L+H+DCC DCLIDGA+NVVSADTYR QRES KQLAR+ILD
Sbjct: 580  KRLSSKAWDKLLSKYGGGPTLSHEDCCLDCLIDGARNVVSADTYRHQRESFKQLARDILD 639

Query: 176  GNCEDGKYYVSRPWLLQWWKRKVVDAPSEADAGPTAAITCPHGQLMPELATGAKRVLVPE 235
            G  EDGKYYVSR WL QWWKRKVVDAPSEAD+GPTAAI+CPHGQLMPE ATGAKRVLVPE
Sbjct: 640  GKNEDGKYYVSRSWLQQWWKRKVVDAPSEADSGPTAAISCPHGQLMPEQATGAKRVLVPE 699

Query: 236  CFWLFLYKNATSVKHDDLLGCPTFPLDSGECSQCSIELSEVACLEDSLRLLKQRERQTHD 295
             FWLFLY++ATSVK DDLL CPTFPLDS ECS+C+ ELSEV C+EDS+RLLKQR+RQ+H+
Sbjct: 700  GFWLFLYEDATSVKSDDLLVCPTFPLDSKECSECNSELSEVFCMEDSMRLLKQRQRQSHE 759

Query: 296  KLFSGKSMPLSLHCEYFLVPSSWISKWRNYVNPAIKNSDKPETLDGVVQSLMCEKHSGLL 355
            KLF+GKSMPLSL C YFLVPSSWISKWR Y+NPA+KNSD PETL+ V+ +L+CEKHS L+
Sbjct: 760  KLFNGKSMPLSLDCTYFLVPSSWISKWRTYINPAVKNSDTPETLNVVIGALLCEKHSRLI 819

Query: 356  ERPPELIFRRGAIYPRESSAGGLTVISENDWKCFCEKWGAIETKGISARIEKINDSENAF 415
            ERPPELI RRGAI PRESSAGGLT+ISENDWKCFCE+WGA ET+G+SA+IEKINDS NA 
Sbjct: 820  ERPPELILRRGAIIPRESSAGGLTIISENDWKCFCEEWGATETQGVSAKIEKINDSVNAT 879

Query: 416  PGTNEEMPICEDQLSNWDKVNNESENGQIVIRTFPEVCESCIGEKESCELMQKLNYCNED 475
             G+ EEM ICEDQL+NWDK NNES NGQ +I+T PEVCESCIGEKESCEL+ KLNY NED
Sbjct: 880  AGSCEEMAICEDQLANWDKGNNESGNGQFLIKTCPEVCESCIGEKESCELVHKLNYSNED 939

Query: 476  ICVILVRGKEVPRSILEASKGTTETDRRVSKRSRKTKNGSSVMLKVSASTSIYQLKMMIW 535
            ICVILVRGKEVPRSILEASKG  E DRRVSKRSRK KNGSS+ LKVSAST+IYQLKMMIW
Sbjct: 940  ICVILVRGKEVPRSILEASKGFVEADRRVSKRSRKIKNGSSINLKVSASTTIYQLKMMIW 999

Query: 536  ESFGVVKENQILQKGDQTIDIDDECTTLVDVNIFAGDQVIVRDSEIHENRDIADELCDEK 595
            ESFGVVKENQILQKGD TID  DE TTLVDVNIFAGDQ+IVRDSEIHENRDIADELC+EK
Sbjct: 1000 ESFGVVKENQILQKGDITIDHIDENTTLVDVNIFAGDQIIVRDSEIHENRDIADELCNEK 1059

Query: 596  MDSQHTEEGFRGTLLTSNVSSQVV 619
             D+QHTE GFRGTLLTSNVSSQVV
Sbjct: 1060 KDTQHTEGGFRGTLLTSNVSSQVV 1083


>Medtr1g010040.2 | ubiquitin carboxyl-terminal hydrolase | HC |
            chr1:1703938-1713376 | 20130731
          Length = 1060

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/538 (82%), Positives = 487/538 (90%)

Query: 56   KQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSHGKVPVSKVASM 115
            ++EVRSVLAEAPVQPLEQPYFWI SDWLRQWAEN+ P+AIDNTS+QCSHGKVPVSKV S 
Sbjct: 520  REEVRSVLAEAPVQPLEQPYFWIYSDWLRQWAENVTPSAIDNTSIQCSHGKVPVSKVTST 579

Query: 116  KRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRESLKQLAREILD 175
            KRLSSKAWD+LLSKYGGGP L+H+DCC DCLIDGA+NVVSADTYR QRES KQLAR+ILD
Sbjct: 580  KRLSSKAWDKLLSKYGGGPTLSHEDCCLDCLIDGARNVVSADTYRHQRESFKQLARDILD 639

Query: 176  GNCEDGKYYVSRPWLLQWWKRKVVDAPSEADAGPTAAITCPHGQLMPELATGAKRVLVPE 235
            G  EDGKYYVSR WL QWWKRKVVDAPSEAD+GPTAAI+CPHGQLMPE ATGAKRVLVPE
Sbjct: 640  GKNEDGKYYVSRSWLQQWWKRKVVDAPSEADSGPTAAISCPHGQLMPEQATGAKRVLVPE 699

Query: 236  CFWLFLYKNATSVKHDDLLGCPTFPLDSGECSQCSIELSEVACLEDSLRLLKQRERQTHD 295
             FWLFLY++ATSVK DDLL CPTFPLDS ECS+C+ ELSEV C+EDS+RLLKQR+RQ+H+
Sbjct: 700  GFWLFLYEDATSVKSDDLLVCPTFPLDSKECSECNSELSEVFCMEDSMRLLKQRQRQSHE 759

Query: 296  KLFSGKSMPLSLHCEYFLVPSSWISKWRNYVNPAIKNSDKPETLDGVVQSLMCEKHSGLL 355
            KLF+GKSMPLSL C YFLVPSSWISKWR Y+NPA+KNSD PETL+ V+ +L+CEKHS L+
Sbjct: 760  KLFNGKSMPLSLDCTYFLVPSSWISKWRTYINPAVKNSDTPETLNVVIGALLCEKHSRLI 819

Query: 356  ERPPELIFRRGAIYPRESSAGGLTVISENDWKCFCEKWGAIETKGISARIEKINDSENAF 415
            ERPPELI RRGAI PRESSAGGLT+ISENDWKCFCE+WGA ET+G+SA+IEKINDS NA 
Sbjct: 820  ERPPELILRRGAIIPRESSAGGLTIISENDWKCFCEEWGATETQGVSAKIEKINDSVNAT 879

Query: 416  PGTNEEMPICEDQLSNWDKVNNESENGQIVIRTFPEVCESCIGEKESCELMQKLNYCNED 475
             G+ EEM ICEDQL+NWDK NNES NGQ +I+T PEVCESCIGEKESCEL+ KLNY NED
Sbjct: 880  AGSCEEMAICEDQLANWDKGNNESGNGQFLIKTCPEVCESCIGEKESCELVHKLNYSNED 939

Query: 476  ICVILVRGKEVPRSILEASKGTTETDRRVSKRSRKTKNGSSVMLKVSASTSIYQLKMMIW 535
            ICVILVRGKEVPRSILEASKG  E DRRVSKRSRK KNGSS+ LKVSAST+IYQLKMMIW
Sbjct: 940  ICVILVRGKEVPRSILEASKGFVEADRRVSKRSRKIKNGSSINLKVSASTTIYQLKMMIW 999

Query: 536  ESFGVVKENQILQKGDQTIDIDDECTTLVDVNIFAGDQVIVRDSEIHENRDIADELCD 593
            ESFGVVKENQILQKGD TID  DE TTLVDVNIFAGDQ+IVRDSEIHENRDIA +L D
Sbjct: 1000 ESFGVVKENQILQKGDITIDHIDENTTLVDVNIFAGDQIIVRDSEIHENRDIAGKLFD 1057


>Medtr3g108660.1 | ubiquitin carboxyl-terminal hydrolase | HC |
            chr3:50189975-50179265 | 20130731
          Length = 1083

 Score =  920 bits (2379), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/564 (77%), Positives = 494/564 (87%)

Query: 56   KQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSHGKVPVSKVASM 115
            + EVRS+LAEAPV PLE+P++WISSDWLRQWA+NIIPT+IDNTS+QCSHGKVPVSKV S+
Sbjct: 520  RHEVRSILAEAPVPPLERPFYWISSDWLRQWADNIIPTSIDNTSIQCSHGKVPVSKVPSI 579

Query: 116  KRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRESLKQLAREILD 175
            KRLS KAWD+L SKYGG P L+HDD C DCLI GAQ VVSADTYR +RESLK LAR+ILD
Sbjct: 580  KRLSVKAWDKLFSKYGGIPTLSHDDHCRDCLICGAQTVVSADTYRGRRESLKSLARDILD 639

Query: 176  GNCEDGKYYVSRPWLLQWWKRKVVDAPSEADAGPTAAITCPHGQLMPELATGAKRVLVPE 235
            GNC DGKY++SRPWL QWWKRKV+DAPSEADAG TAAI CPHG LMPE A GAKRVL+PE
Sbjct: 640  GNCLDGKYFISRPWLQQWWKRKVLDAPSEADAGLTAAINCPHGLLMPEQAPGAKRVLIPE 699

Query: 236  CFWLFLYKNATSVKHDDLLGCPTFPLDSGECSQCSIELSEVACLEDSLRLLKQRERQTHD 295
             FWLFLY++A SVK DD +G P  P DS ECSQC++ELS+ ACLEDSLR++KQ++RQ H+
Sbjct: 700  TFWLFLYEDAISVKPDDPVGGPALPSDSLECSQCTVELSQAACLEDSLRVVKQKQRQNHE 759

Query: 296  KLFSGKSMPLSLHCEYFLVPSSWISKWRNYVNPAIKNSDKPETLDGVVQSLMCEKHSGLL 355
            KLF  KSMPLS++C+YFLV SSWISKWRNY++P  KN DKPETLDGV+ SL+CEKHS L+
Sbjct: 760  KLFQAKSMPLSVNCKYFLVASSWISKWRNYISPPFKNLDKPETLDGVIDSLICEKHSRLI 819

Query: 356  ERPPELIFRRGAIYPRESSAGGLTVISENDWKCFCEKWGAIETKGISARIEKINDSENAF 415
            ERPPEL+FRRGAI  RESSAGGLT+ISENDW CFCE+WG  ETKGISA I+ INDS+N  
Sbjct: 820  ERPPELVFRRGAIIQRESSAGGLTIISENDWICFCEEWGGSETKGISATIDYINDSDNLL 879

Query: 416  PGTNEEMPICEDQLSNWDKVNNESENGQIVIRTFPEVCESCIGEKESCELMQKLNYCNED 475
             G+ +EM ICEDQ    DK+NNE+  GQI+I+T PEVCESCIGEKESCELM KLNYCNED
Sbjct: 880  TGSCDEMLICEDQSHTEDKMNNENGTGQILIKTCPEVCESCIGEKESCELMHKLNYCNED 939

Query: 476  ICVILVRGKEVPRSILEASKGTTETDRRVSKRSRKTKNGSSVMLKVSASTSIYQLKMMIW 535
            ICVILVRGKEVP+SILEASKG  ETDRR+SKRSRKTKNGSSV LKVSASTS+YQLKMMIW
Sbjct: 940  ICVILVRGKEVPKSILEASKGLVETDRRISKRSRKTKNGSSVSLKVSASTSLYQLKMMIW 999

Query: 536  ESFGVVKENQILQKGDQTIDIDDECTTLVDVNIFAGDQVIVRDSEIHENRDIADELCDEK 595
            ESFGVVKENQIL KGD+ ID+DDEC TL D NIFA DQ+IVRDSEIHENRDIADELC +K
Sbjct: 1000 ESFGVVKENQILHKGDRIIDMDDECATLADANIFARDQIIVRDSEIHENRDIADELCCDK 1059

Query: 596  MDSQHTEEGFRGTLLTSNVSSQVV 619
            MD QHTEEGFRGTLLT+N+SSQVV
Sbjct: 1060 MDVQHTEEGFRGTLLTANISSQVV 1083


>Medtr3g108660.2 | ubiquitin carboxyl-terminal hydrolase | HC |
            chr3:50189946-50180682 | 20130731
          Length = 1003

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/484 (76%), Positives = 422/484 (87%)

Query: 56   KQEVRSVLAEAPVQPLEQPYFWISSDWLRQWAENIIPTAIDNTSLQCSHGKVPVSKVASM 115
            + EVRS+LAEAPV PLE+P++WISSDWLRQWA+NIIPT+IDNTS+QCSHGKVPVSKV S+
Sbjct: 520  RHEVRSILAEAPVPPLERPFYWISSDWLRQWADNIIPTSIDNTSIQCSHGKVPVSKVPSI 579

Query: 116  KRLSSKAWDQLLSKYGGGPKLAHDDCCWDCLIDGAQNVVSADTYRDQRESLKQLAREILD 175
            KRLS KAWD+L SKYGG P L+HDD C DCLI GAQ VVSADTYR +RESLK LAR+ILD
Sbjct: 580  KRLSVKAWDKLFSKYGGIPTLSHDDHCRDCLICGAQTVVSADTYRGRRESLKSLARDILD 639

Query: 176  GNCEDGKYYVSRPWLLQWWKRKVVDAPSEADAGPTAAITCPHGQLMPELATGAKRVLVPE 235
            GNC DGKY++SRPWL QWWKRKV+DAPSEADAG TAAI CPHG LMPE A GAKRVL+PE
Sbjct: 640  GNCLDGKYFISRPWLQQWWKRKVLDAPSEADAGLTAAINCPHGLLMPEQAPGAKRVLIPE 699

Query: 236  CFWLFLYKNATSVKHDDLLGCPTFPLDSGECSQCSIELSEVACLEDSLRLLKQRERQTHD 295
             FWLFLY++A SVK DD +G P  P DS ECSQC++ELS+ ACLEDSLR++KQ++RQ H+
Sbjct: 700  TFWLFLYEDAISVKPDDPVGGPALPSDSLECSQCTVELSQAACLEDSLRVVKQKQRQNHE 759

Query: 296  KLFSGKSMPLSLHCEYFLVPSSWISKWRNYVNPAIKNSDKPETLDGVVQSLMCEKHSGLL 355
            KLF  KSMPLS++C+YFLV SSWISKWRNY++P  KN DKPETLDGV+ SL+CEKHS L+
Sbjct: 760  KLFQAKSMPLSVNCKYFLVASSWISKWRNYISPPFKNLDKPETLDGVIDSLICEKHSRLI 819

Query: 356  ERPPELIFRRGAIYPRESSAGGLTVISENDWKCFCEKWGAIETKGISARIEKINDSENAF 415
            ERPPEL+FRRGAI  RESSAGGLT+ISENDW CFCE+WG  ETKGISA I+ INDS+N  
Sbjct: 820  ERPPELVFRRGAIIQRESSAGGLTIISENDWICFCEEWGGSETKGISATIDYINDSDNLL 879

Query: 416  PGTNEEMPICEDQLSNWDKVNNESENGQIVIRTFPEVCESCIGEKESCELMQKLNYCNED 475
             G+ +EM ICEDQ    DK+NNE+  GQI+I+T PEVCESCIGEKESCELM KLNYCNED
Sbjct: 880  TGSCDEMLICEDQSHTEDKMNNENGTGQILIKTCPEVCESCIGEKESCELMHKLNYCNED 939

Query: 476  ICVILVRGKEVPRSILEASKGTTETDRRVSKRSRKTKNGSSVMLKVSASTSIYQLKMMIW 535
            ICVILVRGKEVP+SILEASKG  ETDRR+SKRSRKTKNGSSV LKVSASTS+YQLKMMIW
Sbjct: 940  ICVILVRGKEVPKSILEASKGLVETDRRISKRSRKTKNGSSVSLKVSASTSLYQLKMMIW 999

Query: 536  ESFG 539
            ESFG
Sbjct: 1000 ESFG 1003