Miyakogusa Predicted Gene

Lj5g3v0540170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M8B1Y6_TRIUA 756 57.6 68.3 (tr|M8B1Y6) Pleiotropic drug resistance protein 4 OS=Triticum urartu GN=TRIUR3_34762 PE=4 SV=1
TAIR_pep AT1G15520.1 512 62.7 71.2 | Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423
Medicago Medtr1g011650.1 631 75.0 80.4 | ABC-2 and plant PDR ABC-type transporter family protein | HC | chr1:2167106-2157509 | 20130731
Soybean Glyma19g35250.1 700 54.6 66.5  
LJGI gnl|LJGI|GO024126 791 91.2 91.2 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0540170.1 length: 624 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 2e-09 192-320
ProfileScan PS50893 ABC_TRANSPORTER_2 13.392 140-391
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 7.2e-10 177-370
IPR013525 ABC-2 type transporter
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 3.4e-43 399-566
IPR013581 Plant PDR ABC transporter associated
HMMPfam PF08370 PDR_assoc 3.5e-26 17-80
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-37 155-353
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.1e-38 163-357
HMMPanther PTHR19241 ATP-BINDING 0 1-624
HMMPanther PTHR19241:SF10 ATP-BINDING 0 1-624
Seg seg seg NA 50-65
104-116
486-503
516-529
Wolf-PSORT
Lj5g3v0540170.1	chlo 7, mito 3, plas 3, mito_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0540170.1