Miyakogusa Predicted Gene
- Lj5g3v0540170.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0540170.1 Non Chatacterized Hit- tr|C5Z683|C5Z683_SORBI
Putative uncharacterized protein Sb10g024610
OS=Sorghu,26.36,1e-17,ATPases associated with a variety of
cellula,AAA+ ATPase domain; ATP-BINDING CASSETTE TRANSPORTER
(P,gene.g59223.t1.1
(1875 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosom... 791 0.0
gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like A... 109 6e-23
gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromos... 88 2e-16
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom... 80 6e-14
gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome... 78 2e-13
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 76 9e-13
gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable ... 66 9e-10
gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome... 66 9e-10
>gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 723
Score = 791 bits (399), Expect = 0.0
Identities = 579/635 (91%), Gaps = 3/635 (0%)
Strand = Plus / Plus
Query: 1175 agattggttccaaaaggggaaaggagcaagatcttttcaatgcactgggttcaatgtatg 1234
||||||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 92 agattggctcaaaaaggggaaatgagcaagatcttttcaatgcaatgggttcaatgtatg 151
Query: 1235 ctgcagttaacttcattggagttcaaaatagtgcctcagtgcagccaatcatatcagttg 1294
||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 152 ctgcagttaccttcattggagttcaaaatggtgcctcagtgcagccaatcatagcagttg 211
Query: 1295 agagaacagtattctacagagaaagagctgctggaatgtattcagctttgccatatgctt 1354
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 212 agagaacagtcttctacagagaaagagctgctggaatgtattcagctttgccatacgctt 271
Query: 1355 ttgcacaggtttgtatcgagcttcctcacatcttggctcaatcctttatatatgggattg 1414
|||||||||| |||||||||||| ||||||||||||||| | || ||||||| ||||
Sbjct: 272 ttgcacaggtggctatcgagcttccccacatcttggctcaaacacttgtatatggaattg 331
Query: 1415 tagtatatgccatgatggggttcaattggtcatcatcaaagttcttatggtatcttttct 1474
|||| |||||||||||||| || |||||||| ||||||||||||| |||||||||||||
Sbjct: 332 tagtttatgccatgatgggatttgattggtcaacatcaaagttcttgtggtatcttttct 391
Query: 1475 tcacgtacttcacattcttgtacttcaccttctatggtatgatgaccatggccatcagtc 1534
||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 392 tcatgtacttcactttcttgtacttcaccttttatggtatgatgaccatggccattagtc 451
Query: 1535 ccaacccacaaattgccagcataatatcctcggcattttactcaatttggagccttttct 1594
| |||||||| |||||| ||||| | || |||||||| ||| |||| |||||||||||||
Sbjct: 452 ctaacccacacattgccggcatattgtcatcggcattctacgcaatatggagccttttct 511
Query: 1595 caggcttcatcattcccttatcaagaatgcccatatggtggaagtggtactattggattt 1654
||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 512 caggcttcatcatgcccttatctagaatacccatatggtggaagtggtactattggattt 571
Query: 1655 gccctgttgcatggaccataaatggactagtgacttcccaatatggagatgacacgagca 1714
|||||||||||||||||||||||||| | ||||||||||||||||||||||||| | | |
Sbjct: 572 gccctgttgcatggaccataaatggattggtgacttcccaatatggagatgacatgggaa 631
Query: 1715 aactggaaaatggtcaacgtattgaagaatttgtggagagttacttcggatttcattatg 1774
|||| | |||||||||||||||||||| ||||||||||||||||||||||||| | |||
Sbjct: 632 aacttg-aaatggtcaacgtattgaag-atttgtggagagttacttcggatttaaacatg 689
Query: 1775 actctctgggaatggtcgcagttgtggtggctggt 1809
| | ||||||| |||| |||| |||||||||||||
Sbjct: 690 attttctgggagtggttgcag-tgtggtggctggt 723
>gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (22%)
Length = 1248
Score = 109 bits (55), Expect = 6e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 1291 gttgagagaacagtattctacagagaaagagctgctggaatgtattcagctttgccatat 1350
|||||||||||||| || || ||||||||||||||||||||||||||||||||| |||||
Sbjct: 376 gttgagagaacagtcttttatagagaaagagctgctggaatgtattcagctttggcatat 435
Query: 1351 gcttttgcacaggtt 1365
|||||||| ||||||
Sbjct: 436 gcttttgctcaggtt 450
Score = 58.0 bits (29), Expect = 2e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1462 tggtatcttttcttcacgtacttcacattcttgtacttcaccttctatggtatgatg 1518
||||| || ||||||| ||| ||||||||| |||||||||||| |||||| ||||||
Sbjct: 547 tggtacctcttcttcatgtatttcacattcctgtacttcacctactatggcatgatg 603
>gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 553
Score = 87.7 bits (44), Expect = 2e-16
Identities = 137/168 (81%)
Strand = Plus / Plus
Query: 916 cttgtagccaatccatcaataatattcatggatgagccaacctctggtcttgatgctaga 975
||||| || ||||| ||||| || ||||||||||| ||||| || || || ||||| |||
Sbjct: 276 cttgtcgcgaatccttcaatcattttcatggatgaaccaacttcaggcctcgatgcaaga 335
Query: 976 gcagctgcaattgtaatgagaactgtgaggaacaccgtggacacaggacggactgtggtt 1035
||||| || ||||| ||||| || ||||| ||||| || ||||| ||| |||| || ||
Sbjct: 336 gcagcagccattgttatgaggacagtgagaaacactgttgacactggaaggacagttgtc 395
Query: 1036 tgcaccatccaccagccaagtattgatatatttgatgcatttgatgag 1083
||||| || ||||| || ||||||||||| ||||| || |||||||||
Sbjct: 396 tgcacaattcaccaacctagtattgatatctttgaagcctttgatgag 443
>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 461
Score = 79.8 bits (40), Expect = 6e-14
Identities = 118/144 (81%)
Strand = Plus / Plus
Query: 940 ttcatggatgagccaacctctggtcttgatgctagagcagctgcaattgtaatgagaact 999
||||||||||| ||||| || ||||| |||| ||||||||| || ||||| ||||| ||
Sbjct: 7 ttcatggatgaaccaacttcaggtctagatgttagagcagcagctattgttatgagggct 66
Query: 1000 gtgaggaacaccgtggacacaggacggactgtggtttgcaccatccaccagccaagtatt 1059
|| || ||||| ||||| || ||| | || || |||||||| || |||||||| || |||
Sbjct: 67 gtcagaaacactgtggatactggaagaacagttgtttgcacgattcaccagcctagcatt 126
Query: 1060 gatatatttgatgcatttgatgag 1083
||||| ||||| || |||||||||
Sbjct: 127 gatatctttgaagcctttgatgag 150
>gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 695
Score = 77.8 bits (39), Expect = 2e-13
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1456 ttcttatggtatcttttcttcacgtacttcacattcttgtacttcaccttctatggtatg 1515
||||| |||||| | ||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 301 ttcttttggtatttgttcttcatgtacttcacattgttgtacttcaccttctatgggatg 360
Query: 1516 atg 1518
|||
Sbjct: 361 atg 363
Score = 75.8 bits (38), Expect = 9e-13
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 1201 caagatcttttcaatgcactgggttcaatgtatgctgcagttaacttcattggagttcaa 1260
|||||||| || ||||| |||||||||||||| ||| ||| |||| ||||||| |||
Sbjct: 46 caagatctgttgaatgctgtgggttcaatgtatagtgctgttctcttccttggagtgcaa 105
Query: 1261 aatagtgcctcagtgcagccaatcatatcagttgagagaacagtattctacagagaaaga 1320
|| | | || || |||||| | |||||||||| |||||||| ||||| ||||||| |
Sbjct: 106 aactcttcatctgtacagccagtggtatcagttgaaagaacagtcttctatagagaaaaa 165
Query: 1321 gctgctggaatgtattcagctttgccatatgcttttgc 1358
||||||||||||||||| || || || ||||| |||||
Sbjct: 166 gctgctggaatgtattctgccttaccctatgcatttgc 203
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 75.8 bits (38), Expect = 9e-13
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 1201 caagatcttttcaatgcactgggttcaatgtatgctgcagttaacttcattggagttcaa 1260
|||||||| || ||||| |||||||||||||| ||| ||| |||| ||||||| |||
Sbjct: 554 caagatctgttgaatgctgtgggttcaatgtatagtgctgttctcttccttggagtgcaa 613
Query: 1261 aatagtgcctcagtgcagccaatcatatcagttgagagaacagtattctacagagaaaga 1320
|| | | || || |||||| | |||||||||| |||||||| ||||| ||||||| |
Sbjct: 614 aactcttcatctgtacagccagtggtatcagttgaaagaacagtcttctatagagaaaaa 673
Query: 1321 gctgctggaatgtattcagctttgccatatgcttttgc 1358
||||||||||||||||| || || || ||||| |||||
Sbjct: 674 gctgctggaatgtattctgccttaccctatgcatttgc 711
Score = 65.9 bits (33), Expect = 9e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 991 atgagaactgtgaggaacaccgtggacacaggacggactgtggtttgcaccatccaccag 1050
|||||||| || |||||||| |||||||||||| | || || || ||||||||||||||
Sbjct: 5 atgagaacagtcaggaacactgtggacacaggaagaacagttgtatgcaccatccaccaa 64
Query: 1051 ccaagtattgatatatttgatgcatttgatgag 1083
|| || ||||| || ||||| || |||||||||
Sbjct: 65 cctagcattgacatttttgaagcttttgatgag 97
>gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable pleiotropic drug
resistance protein 3; n=1; Arabidopsis thaliana|Rep:
Probable pleiotropic drug resistance protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 424
Score = 65.9 bits (33), Expect = 9e-10
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 535 gtactaacagctctaatgggtgtaagtggtgctggcaagactactctgatggatgtttta 594
||||||||||| ||||||| |||||| ||||| ||||| ||| | ||||||||| |
Sbjct: 228 gtactaacagcattaatggggtcaagtggagctggaaagacaactttaatggatgttctt 169
Query: 595 gctggaaggaaaactggtggatatattga 623
|||||||| |||||||| |||||||||||
Sbjct: 168 gctggaagaaaaactggaggatatattga 140
>gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1481
Score = 65.9 bits (33), Expect = 9e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1036 tgcaccatccaccagccaagtattgatatatttgatgcatttgatgagg 1084
||||| || ||||| |||||||||||||||||||| |||||||||||||
Sbjct: 167 tgcactattcaccaaccaagtattgatatatttgaggcatttgatgagg 215