Miyakogusa Predicted Gene

Lj5g3v0540130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MWN5_SOYBN 2420 83.4 89.5 (tr|I1MWN5) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2
TAIR_pep AT1G15520.1 1835 63.0 76.8 | Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423
Medicago Medtr1g011650.1 2388 81.5 89.1 | ABC-2 and plant PDR ABC-type transporter family protein | HC | chr1:2167106-2157509 | 20130731
Soybean Glyma17g30980.1 2323 81.1 86.9  
LJGI gnl|LJGI|GO024126 1273 99.5 99.5 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr9 scaffold_7, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0540130.1 length: 1404 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 8.8e-09 192-349
901-1029
ProfileScan PS50893 ABC_TRANSPORTER_2 13.866 152-425
849-1101
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.2e-11 177-402
886-1078
IPR013525 ABC-2 type transporter
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 3e-55 504-716
1175-1388
IPR013581 Plant PDR ABC transporter associated
HMMPfam PF08370 PDR_assoc 9.1e-26 721-784
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 0.00039 864-1078
165-429
95-201
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.4e-39 284-414
872-1082
HMMPanther PTHR19241 ATP-BINDING 0 378-1404
HMMPanther PTHR19241:SF10 ATP-BINDING 0 378-1404
Seg seg seg NA 190-202
356-372
675-685
1308-1330
Wolf-PSORT
Lj5g3v0540130.1	plas 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0540130.1