Miyakogusa Predicted Gene
- Lj5g3v0540130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0540130.1 tr|G7I6C5|G7I6C5_MEDTR Pleiotropic drug
resistance ABC transporter family protein OS=Medicago
trunca,85.25,0,ATP-BINDING CASSETTE TRANSPORTER (PDR),NULL;
ATP-BINDING CASSETTE TRANSPORTER,NULL; ABC_TRANSPORTER_,CUFF.53350.1
(4212 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosom... 1273 0.0
gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like A... 115 2e-24
gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosom... 98 5e-19
gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome... 88 5e-16
gnl|LJGI|FS343429 similar to UniRef100_Q1M2R7 Cluster: PDR-like ... 80 1e-13
gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosom... 76 2e-12
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 76 2e-12
gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromos... 70 1e-10
gnl|LJGI|BP057421 similar to UniRef100_A7P746 Cluster: Chromosom... 68 5e-10
gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable ... 66 2e-09
gnl|LJGI|DC593414 similar to UniRef100_A7P7M5 Cluster: Chromosom... 58 5e-07
gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome... 56 2e-06
>gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 723
Score = 1273 bits (642), Expect = 0.0
Identities = 655/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Plus
Query: 3551 acttatcttattggcggaacacatcatatactgcagttagactcctatttacaacactaa 3610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acttatcttattggcggaacacatcatatactgcagttagactcctatttacaacactaa 61
Query: 3611 tagctttaatgtttggggtcttattttgggagattggctcaaaaaggggaaatgagcaag 3670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tagctttaatgtttggggtcttattttgggagattggctcaaaaaggggaaatgagcaag 121
Query: 3671 atcttttcaatgcaatgggttcaatgtatgctgcagttaccttcattggagttcaaaatg 3730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atcttttcaatgcaatgggttcaatgtatgctgcagttaccttcattggagttcaaaatg 181
Query: 3731 gtgcctcagtgcagccaatcatagcagttgagagaacagtcttctacagagaaagagctg 3790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtgcctcagtgcagccaatcatagcagttgagagaacagtcttctacagagaaagagctg 241
Query: 3791 ctggaatgtattcagctttgccatatgcttttgcacaggtggctatcgagcttccccaca 3850
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 242 ctggaatgtattcagctttgccatacgcttttgcacaggtggctatcgagcttccccaca 301
Query: 3851 tcttggctcaaacacttgtatatggaattgtagtttatgccatgatgggatttgattggt 3910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcttggctcaaacacttgtatatggaattgtagtttatgccatgatgggatttgattggt 361
Query: 3911 caacatcaaagttcttgtggtatcttttcttcatgtacttcactttcttgtacttcacct 3970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caacatcaaagttcttgtggtatcttttcttcatgtacttcactttcttgtacttcacct 421
Query: 3971 tttatggtatgatgaccatggccattagtcctaacccacacattgccggcatattgtcat 4030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttatggtatgatgaccatggccattagtcctaacccacacattgccggcatattgtcat 481
Query: 4031 cggcattctacgcaatatggagccttttctcaggcttcatcattcccttatctagaatac 4090
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 482 cggcattctacgcaatatggagccttttctcaggcttcatcatgcccttatctagaatac 541
Query: 4091 ccatatggtggaagtggtactattggatttgccctgttgcatggaccataaatggattgg 4150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccatatggtggaagtggtactattggatttgccctgttgcatggaccataaatggattgg 601
Query: 4151 tgacttcccaatatggagatgacatgggaaaacttgaaaatggtcaacgtattgaaga 4208
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 602 tgacttcccaatatggagatgacatgggaaaacttg-aaatggtcaacgtattgaaga 658
>gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (22%)
Length = 1248
Score = 115 bits (58), Expect = 2e-24
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 3737 cagtgcagccaatcatagcagttgagagaacagtcttctacagagaaagagctgctggaa 3796
||||||||||| | | || ||||||||||||||||| || |||||||||||||||||||
Sbjct: 356 cagtgcagccagtggttgctgttgagagaacagtcttttatagagaaagagctgctggaa 415
Query: 3797 tgtattcagctttgccatatgcttttgcacaggt 3830
|||||||||||||| ||||||||||||| |||||
Sbjct: 416 tgtattcagctttggcatatgcttttgctcaggt 449
>gnl|LJGI|BP055095 similar to UniRef100_A7PQG8 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 538
Score = 97.6 bits (49), Expect = 5e-19
Identities = 139/169 (82%)
Strand = Plus / Plus
Query: 1145 tacagccagcatcagaaacatatgaactgtttgatgatataatacttctaacagatggac 1204
||||||||||| |||| |||| |||||| || || || || || || || |||| || |
Sbjct: 277 tacagccagcaccagagacatttgaactcttcgacgacattatcctgctttcagaaggtc 336
Query: 1205 aaatagtgtaccaaggaccaagagaaaatgtacttgagttttttgaatcaatgggtttca 1264
|||| || |||||||| ||| |||| || || || ||||||||||| | ||||||||||
Sbjct: 337 aaattgtataccaaggtccacgagagaacgtgctagagttttttgagtacatgggtttca 396
Query: 1265 agtgtcctgaaagaaaaggagtttctgacttcttacaagaagtgacatc 1313
||||||||||||||||||||| | ||||||| |||||||||| |||||
Sbjct: 397 agtgtcctgaaagaaaaggagctgctgactttctacaagaagtaacatc 445
Score = 67.9 bits (34), Expect = 5e-10
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 952 gatggaatgataagaggtatctcaggagggcagaaaaaacgagtcacaacaggggagatg 1011
|||| ||||| ||| |||||||| || || ||||| || |||| |||||||| ||||||
Sbjct: 84 gatgaaatgagaaggggtatctctggtggacagaagaagagagtaacaacaggtgagatg 143
Query: 1012 ctggttggacctgtaagggtgttgtttatggatgagatatcaactggtttggacagttcc 1071
||||| ||||||| || || | || |||||||| |||||||| || ||||||||||||
Sbjct: 144 ctggtaggacctgcaaaggcactcttcatggatgaaatatcaacaggattggacagttcc 203
Query: 1072 ac 1073
||
Sbjct: 204 ac 205
>gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 695
Score = 87.7 bits (44), Expect = 5e-16
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 3881 tagtttatgccatgatgggatttgattggtcaacatcaaagttcttgtggtatcttttct 3940
|||||||||||||||| |||||||||||| | || || ||||| |||||| | ||||
Sbjct: 260 tagtttatgccatgatcggatttgattggactgcagagaaattcttttggtatttgttct 319
Query: 3941 tcatgtacttcactttcttgtacttcaccttttatggtatgatg 3984
||||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 320 tcatgtacttcacattgttgtacttcaccttctatgggatgatg 363
Score = 75.8 bits (38), Expect = 2e-12
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3755 cagttgagagaacagtcttctacagagaaagagctgctggaatgtattcagctttgccat 3814
||||||| |||||||||||||| ||||||| |||||||||||||||||| || || || |
Sbjct: 134 cagttgaaagaacagtcttctatagagaaaaagctgctggaatgtattctgccttaccct 193
Query: 3815 atgcttttgc 3824
|||| |||||
Sbjct: 194 atgcatttgc 203
>gnl|LJGI|FS343429 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (17%)
Length = 742
Score = 79.8 bits (40), Expect = 1e-13
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 509 atgttagtggaatcataaagcctagaagaatgacattgcttttggggccaccaggctcag 568
||||||||||||| ||||||||| ||||||||| |||||||||| || ||| | ||||
Sbjct: 498 atgttagtggaataataaagccttctagaatgacactgcttttgggccctccaagttcag 557
Query: 569 gaaagaccactttgctgttggcgttggctggaaaacttga 608
|||| || || | |||||||| |||||||||||||||||
Sbjct: 558 gaaaaactacactcctgttggcattggctggaaaacttga 597
>gnl|LJGI|BW623406 similar to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 461
Score = 75.8 bits (38), Expect = 2e-12
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 3067 ttcatggatgagccaacctctggtcttgatgctagagcagctgcaattgtaatgagaact 3126
||||||||||| ||||| || ||||| |||| ||||||||| || ||||| ||||| ||
Sbjct: 7 ttcatggatgaaccaacttcaggtctagatgttagagcagcagctattgttatgagggct 66
Query: 3127 gtgaggaacaccgtggacacaggacgcactgtggtttgcaccatccaccagccaagtatt 3186
|| || ||||| ||||| || ||| | || || |||||||| || |||||||| || |||
Sbjct: 67 gtcagaaacactgtggatactggaagaacagttgtttgcacgattcaccagcctagcatt 126
Query: 3187 gatatatttgatgcattcgatgagct 3212
||||| ||||| || || ||||||||
Sbjct: 127 gatatctttgaagcctttgatgagct 152
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 75.8 bits (38), Expect = 2e-12
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 3755 cagttgagagaacagtcttctacagagaaagagctgctggaatgtattcagctttgccat 3814
||||||| |||||||||||||| ||||||| |||||||||||||||||| || || || |
Sbjct: 642 cagttgaaagaacagtcttctatagagaaaaagctgctggaatgtattctgccttaccct 701
Query: 3815 atgcttttgc 3824
|||| |||||
Sbjct: 702 atgcatttgc 711
Score = 61.9 bits (31), Expect = 3e-08
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 3118 atgagaactgtgaggaacaccgtggacacaggacgcactgtggtttgcaccatccaccag 3177
|||||||| || |||||||| |||||||||||| | || || || ||||||||||||||
Sbjct: 5 atgagaacagtcaggaacactgtggacacaggaagaacagttgtatgcaccatccaccaa 64
Query: 3178 ccaagtattgatatatttgatgcattcgatgagct 3212
|| || ||||| || ||||| || || ||||||||
Sbjct: 65 cctagcattgacatttttgaagcttttgatgagct 99
>gnl|LJGI|DC598342 homologue to UniRef100_A7P745 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (33%)
Length = 553
Score = 69.9 bits (35), Expect = 1e-10
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 3067 ttcatggatgagccaacctctggtcttgatgctagagcagctgcaattgtaatgagaact 3126
||||||||||| ||||| || || || ||||| |||||||| || ||||| ||||| ||
Sbjct: 300 ttcatggatgaaccaacttcaggcctcgatgcaagagcagcagccattgttatgaggaca 359
Query: 3127 gtgaggaacaccgtggacacaggacgcactgtggtttgcaccatccaccagccaagtatt 3186
||||| ||||| || ||||| ||| | || || || ||||| || ||||| || ||||||
Sbjct: 360 gtgagaaacactgttgacactggaaggacagttgtctgcacaattcaccaacctagtatt 419
Query: 3187 gatatatttgatgcattcgatgagctg 3213
||||| ||||| || || |||||||||
Sbjct: 420 gatatctttgaagcctttgatgagctg 446
>gnl|LJGI|BP057421 similar to UniRef100_A7P746 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 547
Score = 67.9 bits (34), Expect = 5e-10
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 713 ttggagaaatgactgtcagagaaacactagctttctcagctagatgtcaaggggttgg 770
|||||||||||||||| | |||||| || | ||||||||||||||| |||||||||||
Sbjct: 136 ttggagaaatgactgtgaaagaaaccctggatttctcagctagatgccaaggggttgg 193
Score = 65.9 bits (33), Expect = 2e-09
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1033 ttgtttatggatgagatatcaactggtttggacagttccacaacttttcaaat 1085
||||||||||||||||||||||| ||| | || ||||||||||| ||||||||
Sbjct: 456 ttgtttatggatgagatatcaacgggtcttgatagttccacaacatttcaaat 508
>gnl|LJGI|BP029778 similar to UniRef100_Q7PC88 Cluster: Probable pleiotropic drug
resistance protein 3; n=1; Arabidopsis thaliana|Rep:
Probable pleiotropic drug resistance protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 424
Score = 65.9 bits (33), Expect = 2e-09
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 2662 gtactaacagctctaatgggtgtaagtggtgctggcaagactactctgatggatgtttta 2721
||||||||||| ||||||| |||||| ||||| ||||| ||| | ||||||||| |
Sbjct: 228 gtactaacagcattaatggggtcaagtggagctggaaagacaactttaatggatgttctt 169
Query: 2722 gctggaaggaaaactggtggatatattga 2750
|||||||| |||||||| |||||||||||
Sbjct: 168 gctggaagaaaaactggaggatatattga 140
>gnl|LJGI|DC593414 similar to UniRef100_A7P7M5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 564
Score = 58.0 bits (29), Expect = 5e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 106 gaagatgatgaagaagctctgaaatgggctgca 138
|||||||||||||| ||||||||||||||||||
Sbjct: 412 gaagatgatgaagaggctctgaaatgggctgca 444
>gnl|LJGI|TC69451 similar to UniRef100_A7PRJ5 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1481
Score = 56.0 bits (28), Expect = 2e-06
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 3163 tgcaccatccaccagccaagtattgatatatttgatgcattcgatgag 3210
||||| || ||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 167 tgcactattcaccaaccaagtattgatatatttgaggcatttgatgag 214