Miyakogusa Predicted Gene

Lj5g3v0468090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KT26_MEDTR 1019 76.8 86.5 (tr|G7KT26) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g038440 PE=4 SV=1
TAIR_pep AT2G46050.1 495 47.0 62.5 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr2:18939262-18941034 FORWARD LENGTH=590
Medicago Medtr8g028890.1 1019 76.8 86.5 | PPR containing plant-like protein | HC | chr8:11200768-11198782 | 20130731
Soybean Glyma07g07490.1 886 78.9 87.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v0468090.1 length: 647 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0017 96-122
230-259
303-329
404-424
504-529
HMMPfam PF13041 PPR_2 1.8e-09 329-374
429-477
HMMTigr TIGR00756 PPR: 0.0026 230-259
303-331
331-365
432-465
505-528
ProfileScan PS51375 PPR 6.106 91-125
162-196
228-262
197-227
329-363
298-328
430-464
399-429
501-531
465-495
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.6e-05 401-471
no_ID  
HMMPanther PTHR24015 FAMILY 6.4e-200 76-620
HMMPanther PTHR24015:SF49 SUBFAMILY 6.4e-200 76-620
Wolf-PSORT
Lj5g3v0468090.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v0468090.1