Miyakogusa Predicted Gene
- Lj5g3v0370000.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J538_MEDTR |
697 |
83.0 |
87.3 |
(tr|G7J538) PsRT17-1 like protein OS=Medicago truncatula GN=MTR_3g100310 PE=4 SV=1 |
| TAIR_pep |
AT4G24530.1 |
617 |
72.8 |
82.8 |
| Symbols: | O-fucosyltransferase family protein | chr4:12667424-12669713 REVERSE LENGTH=519 |
| Medicago |
Medtr3g100310.1 |
697 |
83.0 |
87.3 |
| GDP-fucose protein O-fucosyltransferase | HC | chr3:46123707-46118051 | 20130731 |
| Soybean |
Glyma06g10040.1 |
688 |
82.3 |
87.3 |
|
| LJGI |
gnl|LJGI|FS326303 |
375 |
100.0 |
100.0 |
similar to UniRef100_A7NUM5 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v0370000.1 |
length: 401 aa. |
| IPR019378 |
GDP-fucose protein O-fucosyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10250 |
O-FucT |
7.9e-78 |
2-342 |
| no_ID |
|
| HMMPanther |
PTHR31933 |
FAMILY |
4.2e-176 |
1-401 |
| HMMPanther |
PTHR31933:SF0 |
SUBFAMILY |
4.2e-176 |
1-401 |
| Seg |
seg |
seg |
NA |
30-45 |
- Wolf-PSORT
Lj5g3v0370000.1 E.R. 4, E.R._plas 3.33333, cyto 3, E.R._vacu 2.83333, mito 2, cyto_nucl 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v0370000.1 |
|