Miyakogusa Predicted Gene
- Lj5g3v0370000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0370000.1 tr|G7J538|G7J538_MEDTR PsRT17-1 like protein
OS=Medicago truncatula GN=MTR_3g100310 PE=4
SV=1,86.03,0,O-FucT,GDP-fucose protein O-fucosyltransferase; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NODE_50970_length_1924_cov_32.320168.path2.1
(1206 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS326303 similar to UniRef100_A7NUM5 Cluster: Chromosom... 375 e-103
gnl|LJGI|TC61871 similar to UniRef100_A6XN18 Cluster: Expressed ... 163 3e-39
gnl|LJGI|TC64886 similar to UniRef100_A7R517 Cluster: Chromosome... 54 2e-06
gnl|LJGI|TC57293 similar to UniRef100_P93487 Cluster: PsRT17-1; ... 54 2e-06
>gnl|LJGI|FS326303 similar to UniRef100_A7NUM5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 682
Score = 375 bits (189), Expect = e-103
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 1 atggggatatgtgatgctgtggccgttgctaaaattttgaatgcgacgttggtgatcccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 atggggatatgtgatgctgtggccgttgctaaaattttgaatgcgacgttggtgatcccg 553
Query: 61 cattttgaagtgaatcctgtttggcaagattcaagttcatttgcagatatatttgatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cattttgaagtgaatcctgtttggcaagattcaagttcatttgcagatatatttgatatc 613
Query: 121 gatcacttcattgatgtcctccgtgatgaagtatctatagtgaaagagcttcctagtgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gatcacttcattgatgtcctccgtgatgaagtatctatagtgaaagagcttcctagtgac 673
Query: 181 tacgcttgg 189
|||||||||
Sbjct: 674 tacgcttgg 682
>gnl|LJGI|TC61871 similar to UniRef100_A6XN18 Cluster: Expressed protein; n=1; Prunus
persica|Rep: Expressed protein - Prunus persica (Peach),
partial (43%)
Length = 1015
Score = 163 bits (82), Expect = 3e-39
Identities = 211/254 (83%)
Strand = Plus / Plus
Query: 562 tttgacaaagatatggctggtcattcagcctgtggatttggtggaggtgtagctgggaaa 621
||||| || |||||||| | |||||||||||||| |||||||| || ||||| ||||
Sbjct: 86 tttgataaggatatggcagctcattcagcctgtgattttggtgggggaaaagctgagaaa 145
Query: 622 cgtgctcttggtaagtaccgaaaggtgatttggcagggaagggtaatgaaaactcaattc 681
||| |||| ||||| || |||||||||||||||||||| | | || ||||||||
Sbjct: 146 tttgcccttgcaaagtatagacaggtgatttggcagggaaggcttctcaattctcaattc 205
Query: 682 actgatgaagagttgagaagtcagggtcgttgcccgctgactcctgaagagattggattg 741
||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||
Sbjct: 206 actgatgaagagttgaggagtcagggtcgttgcccaatgactccagaagaggttggattg 265
Query: 742 ctcctagcagctttggggttcaacaacagaactcggctttatcttgcttcccacaaggtt 801
| |||||||||||||| || ||||||| || || | ||||||||||| || |||||
Sbjct: 266 ttgctagcagctttgggatttgacaacagcacgcgtttatatcttgcttctcataaggtc 325
Query: 802 tatggtggagaagc 815
||||||||||||||
Sbjct: 326 tatggtggagaagc 339
Score = 63.9 bits (32), Expect = 2e-09
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1165 atatacacatatcctgctcctgattgcatgtg 1196
||||||||||||||||||||||||||||||||
Sbjct: 689 atatacacatatcctgctcctgattgcatgtg 720
>gnl|LJGI|TC64886 similar to UniRef100_A7R517 Cluster: Chromosome undetermined
scaffold_833, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_833,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 751
Score = 54.0 bits (27), Expect = 2e-06
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 73 aatcctgtttggcaagattcaagttcatttgcagatatatttgatatcgatcacttcatt 132
|||||||| |||| ||||||||| || || |||||||||||| | ||||| ||||||
Sbjct: 595 aatcctgtatggcgagattcaagctccttcatggatatatttgatgtggatcatttcatt 654
Query: 133 gatgtcctccgtgatgaagtatctatagtgaaagagcttcctagtgactacgcttggagc 192
||||| | ||||| | |||||||| |||||||||||| || ||| | ||||||
Sbjct: 655 gatgtattgaaggatgatatttctatagttaaagagcttcctgaagagtactcgtggagc 714
Query: 193 tcaagggagtactatgcca 211
||||||||||||||||||
Sbjct: 715 acaagggagtactatgcca 733
>gnl|LJGI|TC57293 similar to UniRef100_P93487 Cluster: PsRT17-1; n=1; Pisum
sativum|Rep: PsRT17-1 - Pisum sativum (Garden pea),
partial (40%)
Length = 833
Score = 54.0 bits (27), Expect = 2e-06
Identities = 111/139 (79%)
Strand = Plus / Plus
Query: 73 aatcctgtttggcaagattcaagttcatttgcagatatatttgatatcgatcacttcatt 132
|||||||| |||| ||||||||| || || |||||||||||| | ||||| ||||||
Sbjct: 505 aatcctgtatggcgagattcaagctccttcatggatatatttgatgtggatcatttcatt 564
Query: 133 gatgtcctccgtgatgaagtatctatagtgaaagagcttcctagtgactacgcttggagc 192
||||| | ||||| | |||||||| |||||||||||| || ||| | ||||||
Sbjct: 565 gatgtattgaaggatgatatttctatagttaaagagcttcctgaagagtactcgtggagc 624
Query: 193 tcaagggagtactatgcca 211
||||||||||||||||||
Sbjct: 625 acaagggagtactatgcca 643
Score = 52.0 bits (26), Expect = 8e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 263 actggtatatagaaaatgttttgcctgtaattcagagttatgggattgctgccgttgccc 322
|||||||| | ||||||||||||||||| | ||||||| ||| |||||||| | | |
Sbjct: 695 actggtatctggaaaatgttttgcctgtcttgcagagttttggtattgctgcaatctctc 754
Query: 323 cattttctcatcgcttga 340
|||||||||| |||||||
Sbjct: 755 cattttctcaccgcttga 772