Miyakogusa Predicted Gene

Lj4g3v3113810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQE8_SOYBN 1689 84.0 86.0 (tr|I1KQE8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G32730.1 1544 77.4 81.2 | Symbols: | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr2:13880189-13885464 FORWARD LENGTH=1004
Medicago Medtr8g106120.1 1667 83.2 85.7 | 26S proteasome regulatory complex component | HC | chr8:44805674-44811877 | 20130731
Soybean Glyma08g05350.1 1689 84.0 86.0  
LJGI gnl|LJGI|TC75855 1972 100.0 100.0 similar to UniRef100_A7Q7J2 Cluster: Chromosome undetermined scaffold_60, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_60, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v3113810.1 length: 1004 aa.
IPR002015 Proteasome/cyclosome, regulatory subunit
method AccNumber shortName E-value location
HMMPfam PF01851 PC_rep 4.6e-05 491-523
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 4e-11 476-707
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 4.5e-34 11-756
IPR016642 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
Cellular Component GO:0000502 proteasome complex    
Molecular Function GO:0030234 enzyme regulator activity    
Biological Process GO:0042176 regulation of protein catabolic process    
HMMPIR PIRSF015947 26S 0 3-1003
no_ID  
Coil coil coiled-coil NA 850-871
HMMPanther PTHR10943 26S 0 3-1004
HMMPanther PTHR10943:SF2 26S 0 3-1004
HMMPfam PF13646 HEAT_2 6.7e-10 615-705
Seg seg seg NA 443-456
491-504
828-844
851-868
870-888
903-910
968-987
Wolf-PSORT
Lj4g3v3113810.1	chlo 5, extr 3, chlo_mito 3, cyto 2, E.R. 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v3113810.1