Miyakogusa Predicted Gene

Lj4g3v2882020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JIS9_SOYBN 1001 61.4 74.9 (tr|I1JIS9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G71210.1 605 44.1 62.6 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:26838850-26841489 REVERSE LENGTH=879
Medicago Medtr5g088490.2 1015 60.3 75.2 | PPR containing plant-like protein | LC | chr5:38409043-38411682 | 20130731
Soybean Glyma02g44420.1 1006 61.5 74.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2882020.1 length: 868 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0018 176-201
245-265
311-333
451-473
518-546
587-616
657-684
HMMPfam PF13041 PPR_2 9.9e-09 377-425
792-838
HMMTigr TIGR00756 PPR: 0.00031 310-333
380-413
451-483
587-616
656-688
794-826
829-860
ProfileScan PS51375 PPR 11.334 170-204
239-273
307-342
274-304
343-377
378-412
413-447
448-482
515-549
483-513
584-618
653-687
619-649
688-722
792-825
826-860
no_ID  
HMMPanther PTHR24015 FAMILY 2.3e-91 14-860
HMMPanther PTHR24015:SF0 SUBFAMILY 2.3e-91 14-860
Seg seg seg NA 7-16
27-47
81-99
superfamily SSF48452 TPR-like 0.013 619-717
777-855
Wolf-PSORT
Lj4g3v2882020.1	cyto 4, plas 4, cyto_plas 4, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2882020.1