Miyakogusa Predicted Gene
- Lj4g3v2882020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2882020.1 Non Chatacterized Hit- tr|I1JIS9|I1JIS9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48548 PE,63.38,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; seg,NULL;
SUBFAMILY NOT NAMED,NULL; F,CUFF.51807.1
(868 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 605 e-173
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 2e-42
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 1e-35
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 148 1e-35
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 145 2e-34
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 142 9e-34
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 5e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 139 1e-32
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 2e-32
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 4e-32
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 7e-32
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 7e-32
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 8e-32
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 1e-31
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 4e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 5e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 1e-30
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-30
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 2e-30
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 3e-30
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 5e-30
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 1e-29
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 2e-29
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 8e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 2e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 6e-28
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 1e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 5e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 1e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 4e-26
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 5e-26
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 115 2e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 5e-25
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 5e-25
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 6e-25
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 111 2e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 3e-24
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 4e-24
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 106 6e-23
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-22
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 104 3e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 3e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 3e-21
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 7e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 99 1e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 99 1e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 99 1e-20
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 8e-19
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 9e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 89 2e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 6e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 1e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 6e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 1e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 4e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 4e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 80 6e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 9e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 1e-13
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 9e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 73 1e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 1e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 72 2e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 70 7e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 8e-12
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 67 7e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-11
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 7e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 66 9e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 1e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-10
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 8e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 1e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 1e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 3e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 61 4e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 5e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 60 7e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 9e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 1e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 56 1e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 54 6e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 52 1e-06
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 51 4e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 50 7e-06
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-06
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 605 bits (1560), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/740 (44%), Positives = 463/740 (62%), Gaps = 15/740 (2%)
Query: 100 ETFVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFL 159
E FVL VL H DIL CLKFFDWA RQP F+HTR TF AIF+IL A+L L+ DFL
Sbjct: 112 EKFVLDVLSH--TRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAKLVTLMIDFL 169
Query: 160 R---DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSL 216
F SC H R D LVVGYA+AG+ DIAL G MRF+GLDLD FGYH+LLN+L
Sbjct: 170 DRSVGFESCR--HSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNAL 227
Query: 217 AENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRS 276
E C+++FDVI +QI +RG+ +T+ I++K CKQG+L+EAE +L L+ + S
Sbjct: 228 VEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGS 287
Query: 277 ELSFLIGVLCESNRFERAVELVSEFG--TSLPLENAYGVWIRGLVQGGRLDEALEFFRQK 334
L L+ LC +F+ A +L+ E ++ ++ AY +WIR L++ G L+ +F ++
Sbjct: 288 GLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKI 347
Query: 335 RDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
EG RYN ++ +LL+EN L VY++L +M + PN TMNA LCFFCK G
Sbjct: 348 SPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGF 407
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
VD ALEL+ SRS+ G +P M+Y YLI TLC + ++AY VL+ + G+F +TFST
Sbjct: 408 VDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFST 467
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVT 514
L NALC + K D +L+ A ER +P + +SALC G+VED ++ +K
Sbjct: 468 LTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSG 527
Query: 515 ARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
S + +I G I RGDIAA+L++ M+EKGY RS YR+V+ C+ M++ F
Sbjct: 528 VDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNF 587
Query: 572 FNLLE--MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
F L ++ + +N FI+GA A KP LAR V+++M R+GI +S IL+++S
Sbjct: 588 FTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQS 647
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
Y ++ +I+DAL FF+D+R Q +LY MIVGLCK++K D A+ EM GL PSI
Sbjct: 648 YLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSI 707
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR 749
ECYEV +QKLC+ ++Y EAV LVN + K+GRR+T+F+GNVLL ++M S VY + + R
Sbjct: 708 ECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRM-R 766
Query: 750 EKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMD 809
E + + L +IG FSG + + ++ L+E+I KC+P+D+YTYN+L+R + + +
Sbjct: 767 NIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQAE 826
Query: 810 KACELFDRMCQRGLEPNRWT 829
A E+ +R+ +RG PN T
Sbjct: 827 DAYEMVERIARRGYVPNERT 846
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 175/771 (22%), Positives = 317/771 (41%), Gaps = 89/771 (11%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRD 161
FV+ VLR D + +++F W R+ H ++ ++ +++ R + L +
Sbjct: 67 FVIGVLRRLKD---VNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGE 123
Query: 162 FRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC 221
F +V+G A K ++ MR Y L+ + + N
Sbjct: 124 MSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNH 183
Query: 222 YNAFDVIANQICMRGYES--HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
+ + Q+ GYE H+ + I+ K+GR++ A + L+ + S + +
Sbjct: 184 SDMMLTLFQQMQELGYEPTVHLFTTL-IRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 280 FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
I + + + A + E + P E Y I L + RLDEA+E F +
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
VPC YN +I + + Y LL P+++ N +L K+G VD
Sbjct: 303 RR-VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
AL++F + +PN Y LI LC G A+ + S G FP+ RT + + +
Sbjct: 362 ALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 458 ALCRECKIDE---MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRG---DLD 511
LC+ K+DE M++ +D+ + P+ T+ + L + GRV+D Y + D D
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKV---CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 512 KVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
T Y +I F R KE G+++ Y+ +++
Sbjct: 478 CRTNSIVYTSLIKNFFNHGR-----------KEDGHKI----YKDMIN------------ 510
Query: 572 FNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
+ P + N+++D A +P+ R +FE ++ + +A S +++
Sbjct: 511 -------QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 632 RSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
++ ++ F ++ Q V+ T+ YN +I G CK K + A +L EM G P++
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE 750
Y ++ L + R EA L +E+A + NV+++ S+I
Sbjct: 624 TYGSVIDGLAKIDRLDEAYML---FEEAKSKRIEL--NVVIYSSLID------------- 665
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMD 809
F R+ + LEEL+ K ++YT+N L+ L +++
Sbjct: 666 ----------------GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 810 KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+A F M + PN+ TYG++ +G + ++A + EM K+G P
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 164/746 (21%), Positives = 302/746 (40%), Gaps = 93/746 (12%)
Query: 107 LRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCS 166
LR G D ++ KF +P F TT + F ++ + + +F +++
Sbjct: 149 LREGYDVVQMMRKFKF------RPAF-SAYTTLIGAFSAVNHSDMMLTLFQQMQEL---G 198
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFD 226
+ TL+ G+A G+ D AL LL M+ LD D Y++ ++S
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG--------- 249
Query: 227 VIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC 286
K G+++ A + + +G + + +IGVLC
Sbjct: 250 -------------------------KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 287 ESNRFERAVELVS--EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
++NR + AVE+ E +P AY I G G+ DEA ++R ++G +P
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR-AKGSIPSV 343
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
+ YN ++ L + ++ + ++ +M + PN+ T N ++ C+ G +D A EL +S
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ GL PN ++ LC EA + PD TF +L + L + +
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL-------------- 510
+D+ + + + L+ NS Y+ + GR EDG+ + D+
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 511 ------------------DKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+++ AR SY+ +I G IK+ + L MKE+G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 547 YELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAR 605
L +Y V+ + L EM T G +P + S IDG ++ D A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLY--NRMIVG 663
+FE + I N ++ + + RI +A ++ Q ++ LY N ++
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL-MQKGLTPNLYTWNSLLDA 701
Query: 664 LCKSDKADIALELCFEMLK-VGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
L K+++ + AL +CF+ +K + P+ Y +L+ LC ++++ +A +K G +
Sbjct: 702 LVKAEEINEAL-VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 723 TSFLGNVLLFHSMISPEVYHSCVDLRREK-EGEFLDSSMLTLIIGAFSGCLRVSYSIQEL 781
++ ++ + + + R K G DS+ +I S R +
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 782 EELIAKCFPVDIYTYNLLMRKLTHHD 807
EE + P+ T +L+ L +D
Sbjct: 821 EETRRRGLPIHNKTCVVLLDTLHKND 846
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 141/609 (23%), Positives = 241/609 (39%), Gaps = 74/609 (12%)
Query: 298 VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
V+ FG S+ N + G V+ +L E + + R + F P Y LIG
Sbjct: 126 VAGFGPSV---NTCIEMVLGCVKANKLREGYDVVQMMRKFK-FRPAFSAYTTLIGAFSAV 181
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
N + L M E P + ++ F K G VD AL L + L + + Y
Sbjct: 182 NHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLY 241
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
I + G A++ G PD T++++ LC+ ++DE ++ + +
Sbjct: 242 NVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAAR 537
R +P TY+ Y MIMG+ + + D A
Sbjct: 302 NRRVP--CTYA------------------------------YNTMIMGYGSAGKFDEAYS 329
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMH 597
LL + KG +Y +L CL M EM P+ +N ID
Sbjct: 330 LLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCR 389
Query: 598 ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL- 656
A K D A E+ + MQ+ G+ N + +++ +S+++ +A F ++ ++V ++
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR-------YYEAV 709
+ +I GL K + D A ++ +ML + Y L++ + R Y + +
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 710 N--------LVNVYE-------------------KAGRRLTSFLGNVLLFHSMISPEVYH 742
N L+N Y KA R + +L H +I +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 743 SCVDL--RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLM 800
+L +++G LD+ ++I F C +V+ + Q LEE+ K F + TY ++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 801 RKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFN 859
L D +D+A LF+ + +E N Y + GF GR DEA + E+++KG
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 860 PPENTRNVI 868
P T N +
Sbjct: 690 PNLYTWNSL 698
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/486 (20%), Positives = 188/486 (38%), Gaps = 56/486 (11%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE----NNCY 222
FP+ R + +V + K D A + M ++ D + L++ L + ++ Y
Sbjct: 409 FPN-VRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 223 NAFDVIANQICMRGYESHMTNVIV----IKHLCKQGRLEEAEAHLNGLVGSGKELHRSEL 278
++ + + C TN IV IK+ GR E+ ++ L
Sbjct: 468 KVYEKMLDSDCR-------TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 279 SFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
+ + + ++ E+ + E +P +Y + I GL++ G +E E F ++
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
+G V YNI+I + ++ Y+LL +M P +VT +V+ K+ +D
Sbjct: 581 -QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A LF + N + Y LI G EAY +L G P+ T+++L
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
+AL + +I+E E + PN TY ++ LC+ + ++ ++ K +
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
SY MI G K+ A L K G
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANG--------------------------- 792
Query: 574 LLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
G P +N+ I+G + N+ A +FE +R G+ + + ++++ + ++
Sbjct: 793 -------GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Query: 634 RRISDA 639
+ A
Sbjct: 846 DCLEQA 851
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 151/649 (23%), Positives = 273/649 (42%), Gaps = 58/649 (8%)
Query: 219 NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSEL 278
+ CY A DV + S T I++ L + ++ + +V G
Sbjct: 205 DGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLF 263
Query: 279 SFLIGVLCESNRFERAVELVS--EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
+ I C+ + E AV+L S E P + I GL GR DEA F++K
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMV 322
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
G P + Y+IL+ L R R+ D Y +L +M + PPN++ N ++ F + G ++
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A+E+ + GLS Y LI C +G A R+L+ G+ ++ +F+++
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDL 510
LC D + L R P + +S LC+ G+ +L +G +
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 511 DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR 570
V R S A ++ G ++ + D A R+ E+ +G + R SY ++
Sbjct: 503 --VDTRTSNA-LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 571 FFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
F L EM+ G KP ++ I G + NK + A + ++ +RNG++ + + +++
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 630 YFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
++ R + FF+++ + V +T +YN +I C+S + +ALEL +M G++P+
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM----ISPEVYHSC 744
Y L++ + + R EA LLF M + P V+H
Sbjct: 680 SATYTSLIKGMSIISRVEEA--------------------KLLFEEMRMEGLEPNVFH-- 717
Query: 745 VDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLT 804
T +I + ++ L E+ +K + TY +++
Sbjct: 718 ----------------YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 805 HH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHE 852
++ +A L + M ++G+ P+ TY +G+ G EA + E
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 244/552 (44%), Gaps = 34/552 (6%)
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
++G P K NIL+ L+R N + E D+ + P++ + FCK G V+
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A++LF+ + G++PN + + +I L G EA+ G P T+S L
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR----VEDGYLMRGDLDK 512
L R +I + + +L ++ F PN Y+ + + AG +E LM
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL---HMDNPRT 569
+T+ +Y +I G+ K+ + D A RLL EM G+ + + S+ V+ CLL M +
Sbjct: 398 LTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMFDSAL 455
Query: 570 RFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
RF + ++ + P + + I G K A E++ G + + + ++
Sbjct: 456 RFVGEM-LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ ++ +A R +I + V ++ YN +I G C K D A EM+K GL P
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR 748
Y +L+ L ++ + EA+ + ++ G L +V + MI C
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNG-----MLPDVYTYSVMID-----GCCKAE 624
Query: 749 REKEG-EFLDSSM----------LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
R +EG EF D M +I A+ R+S +++ E++ K + TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 798 LLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
L++ ++ +++A LF+ M GLEPN + Y + G+ G+ + + + EM K
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 857 GFNPPENTRNVI 868
+P + T V+
Sbjct: 745 NVHPNKITYTVM 756
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 200/492 (40%), Gaps = 82/492 (16%)
Query: 127 GRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGK 186
G +P T T+ + + L+ A+ + L++ FP ++ L+ + AG
Sbjct: 325 GMEP----TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 187 PDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGY---ESHMTN 243
+ A+ + M +GL L Y+ L+ +N + + + ++ G+ + T+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT 303
VI + LC + A + ++ L+ LI LC+ + +A+EL +F
Sbjct: 441 VICL--LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-- 496
Query: 304 SLPLENAYGVWIR-------GLVQGGRLDEALEFFRQKRD--SEGFVPCKVRYNILIGRL 354
L + V R GL + G+LDEA FR +++ G V +V YN LI
Sbjct: 497 ---LNKGFVVDTRTSNALLHGLCEAGKLDEA---FRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+ +L + + L +M + + P+ T + ++C + V+ A++ ++ + G+ P+
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF---------PDRRTFSTLANALCRECKI 465
Y +I DGC K R+ G +F P+ ++ L A CR ++
Sbjct: 611 YTYSVMI-----DGCCKAE----RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE------------------------ 501
+L + + PNS+TY+ + + RVE
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 502 -DGYLMRGDLDKVTA-------------RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
DGY G + KV + +Y MI G+ + A+RLL EM+EKG
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 548 ELKRSSYRHVLH 559
+Y+ ++
Sbjct: 782 VPDSITYKEFIY 793
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 148/356 (41%), Gaps = 11/356 (3%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMR 235
TL+ G GK AL L + +G +D + LL+ L E + I +I R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 236 G-YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G ++ +I C + +L+EA L+ +V G + S LI L N+ E A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 295 VELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
++ + + LP Y V I G + R +E EFF + S+ P V YN LI
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIR 653
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
R RL EL DM I PN T +++ + V+ A LF GL P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
N Y LI G + +LR P++ T++ + R+ + E LL
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 473 DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIK 528
+ E+ +P+S TY F+ + G V + + K + +YA +I G+ K
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAF-------KGSDEENYAAIIEGWNK 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 186/449 (41%), Gaps = 44/449 (9%)
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
DGC A V + G FP + T + L +L R + + + D + P+
Sbjct: 205 DGC-YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYL 262
Query: 487 YSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMK 543
++ ++A C+ G+VE+ + +++ ++ +I G R D A +M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPD 602
E+G E +Y ++ L +F L EM G P+ ++N+ ID + A +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 603 LAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMI 661
A E+ +LM G+ +S+ ++K Y ++ + +A R ++ V+ + +I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
LC D AL EML ++P L+ LC ++ +A+ L + G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 722 LTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCL--RVSYSIQ 779
+ + N LL H + +++E I+G GC+ RVSY+
Sbjct: 503 VDTRTSNALL-HGLCEAGKLDEAFRIQKE-------------ILG--RGCVMDRVSYNT- 545
Query: 780 ELEELIAKCFPVDIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSN 839
LI+ C +D+A D M +RGL+P+ +TY ++ G N
Sbjct: 546 ----LISGC--------------CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 840 HGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ +EA ++ + + G P T +V+
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 6/266 (2%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ G K D A L M +GL D + Y IL+ L N +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 234 MRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
G + T ++I CK R EE + + ++ + + + LI C S R
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 293 RAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
A+EL + G S P Y I+G+ R++EA F + R EG P Y
Sbjct: 663 MALELREDMKHKGIS-PNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTA 720
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
LI + ++ V LL +M+ + PN +T ++ + + G V A L N + G
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYR 435
+ P+ + YK I G EA++
Sbjct: 781 IVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 151/649 (23%), Positives = 273/649 (42%), Gaps = 58/649 (8%)
Query: 219 NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSEL 278
+ CY A DV + S T I++ L + ++ + +V G
Sbjct: 205 DGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLF 263
Query: 279 SFLIGVLCESNRFERAVELVS--EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
+ I C+ + E AV+L S E P + I GL GR DEA F++K
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEKMV 322
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
G P + Y+IL+ L R R+ D Y +L +M + PPN++ N ++ F + G ++
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A+E+ + GLS Y LI C +G A R+L+ G+ ++ +F+++
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDL 510
LC D + L R P + +S LC+ G+ +L +G +
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 511 DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR 570
V R S A ++ G ++ + D A R+ E+ +G + R SY ++
Sbjct: 503 --VDTRTSNA-LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 571 FFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
F L EM+ G KP ++ I G + NK + A + ++ +RNG++ + + +++
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 630 YFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
++ R + FF+++ + V +T +YN +I C+S + +ALEL +M G++P+
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM----ISPEVYHSC 744
Y L++ + + R EA LLF M + P V+H
Sbjct: 680 SATYTSLIKGMSIISRVEEA--------------------KLLFEEMRMEGLEPNVFH-- 717
Query: 745 VDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLT 804
T +I + ++ L E+ +K + TY +++
Sbjct: 718 ----------------YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 805 HH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHE 852
++ +A L + M ++G+ P+ TY +G+ G EA + E
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 137/552 (24%), Positives = 244/552 (44%), Gaps = 34/552 (6%)
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
++G P K NIL+ L+R N + E D+ + P++ + FCK G V+
Sbjct: 219 NKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVE 277
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A++LF+ + G++PN + + +I L G EA+ G P T+S L
Sbjct: 278 EAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILV 337
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR----VEDGYLMRGDLDK 512
L R +I + + +L ++ F PN Y+ + + AG +E LM
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 397
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL---HMDNPRT 569
+T+ +Y +I G+ K+ + D A RLL EM G+ + + S+ V+ CLL M +
Sbjct: 398 LTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMFDSAL 455
Query: 570 RFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
RF + ++ + P + + I G K A E++ G + + + ++
Sbjct: 456 RFVGEM-LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ ++ +A R +I + V ++ YN +I G C K D A EM+K GL P
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR 748
Y +L+ L ++ + EA+ + ++ G L +V + MI C
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNG-----MLPDVYTYSVMID-----GCCKAE 624
Query: 749 REKEG-EFLDSSM----------LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
R +EG EF D M +I A+ R+S +++ E++ K + TY
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 798 LLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
L++ ++ +++A LF+ M GLEPN + Y + G+ G+ + + + EM K
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 857 GFNPPENTRNVI 868
+P + T V+
Sbjct: 745 NVHPNKITYTVM 756
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 200/492 (40%), Gaps = 82/492 (16%)
Query: 127 GRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGK 186
G +P T T+ + + L+ A+ + L++ FP ++ L+ + AG
Sbjct: 325 GMEP----TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 187 PDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGY---ESHMTN 243
+ A+ + M +GL L Y+ L+ +N + + + ++ G+ + T+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT 303
VI + LC + A + ++ L+ LI LC+ + +A+EL +F
Sbjct: 441 VICL--LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-- 496
Query: 304 SLPLENAYGVWIR-------GLVQGGRLDEALEFFRQKRD--SEGFVPCKVRYNILIGRL 354
L + V R GL + G+LDEA FR +++ G V +V YN LI
Sbjct: 497 ---LNKGFVVDTRTSNALLHGLCEAGKLDEA---FRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+ +L + + L +M + + P+ T + ++C + V+ A++ ++ + G+ P+
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF---------PDRRTFSTLANALCRECKI 465
Y +I DGC K R+ G +F P+ ++ L A CR ++
Sbjct: 611 YTYSVMI-----DGCCKAE----RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE------------------------ 501
+L + + PNS+TY+ + + RVE
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 502 -DGYLMRGDLDKVTA-------------RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
DGY G + KV + +Y MI G+ + A+RLL EM+EKG
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 548 ELKRSSYRHVLH 559
+Y+ ++
Sbjct: 782 VPDSITYKEFIY 793
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 148/356 (41%), Gaps = 11/356 (3%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMR 235
TL+ G GK AL L + +G +D + LL+ L E + I +I R
Sbjct: 475 TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR 534
Query: 236 G-YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G ++ +I C + +L+EA L+ +V G + S LI L N+ E A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 295 VELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
++ + + LP Y V I G + R +E EFF + S+ P V YN LI
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIR 653
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
R RL EL DM I PN T +++ + V+ A LF GL P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
N Y LI G + +LR P++ T++ + R+ + E LL
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 473 DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIK 528
+ E+ +P+S TY F+ + G V + + K + +YA +I G+ K
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAF-------KGSDEENYAAIIEGWNK 822
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 186/449 (41%), Gaps = 44/449 (9%)
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
DGC A V + G FP + T + L +L R + + + D + P+
Sbjct: 205 DGC-YLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVC-KGVSPDVYL 262
Query: 487 YSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMK 543
++ ++A C+ G+VE+ + +++ ++ +I G R D A +M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPD 602
E+G E +Y ++ L +F L EM G P+ ++N+ ID + A +
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN 382
Query: 603 LAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMI 661
A E+ +LM G+ +S+ ++K Y ++ + +A R ++ V+ + +I
Sbjct: 383 KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
LC D AL EML ++P L+ LC ++ +A+ L + G
Sbjct: 443 CLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Query: 722 LTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCL--RVSYSIQ 779
+ + N LL H + +++E I+G GC+ RVSY+
Sbjct: 503 VDTRTSNALL-HGLCEAGKLDEAFRIQKE-------------ILG--RGCVMDRVSYNT- 545
Query: 780 ELEELIAKCFPVDIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSN 839
LI+ C +D+A D M +RGL+P+ +TY ++ G N
Sbjct: 546 ----LISGC--------------CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 840 HGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ +EA ++ + + G P T +V+
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 6/266 (2%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ G K D A L M +GL D + Y IL+ L N +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 234 MRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
G + T ++I CK R EE + + ++ + + + LI C S R
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 293 RAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
A+EL + G S P Y I+G+ R++EA F + R EG P Y
Sbjct: 663 MALELREDMKHKGIS-PNSATYTSLIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTA 720
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
LI + ++ V LL +M+ + PN +T ++ + + G V A L N + G
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYR 435
+ P+ + YK I G EA++
Sbjct: 781 IVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 152/669 (22%), Positives = 274/669 (40%), Gaps = 59/669 (8%)
Query: 103 VLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFD----F 158
+L LR DD + L+ F+ A ++P F + I L R FD
Sbjct: 53 LLDSLRSQPDDS---AALRLFNLASKKPNFSPEPALYEEILLRLG----RSGSFDDMKKI 105
Query: 159 LRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQ-GLDLDGFGYHILLNSLA 217
L D +S L+ YA D L ++ M + GL D Y+ +LN L
Sbjct: 106 LEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV 165
Query: 218 ENNCYNAFDVIANQICMRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRS 276
+ N ++ ++ + G + ++ ++IK LC+ +L A L + G
Sbjct: 166 DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEK 225
Query: 277 ELSFLIGVLCESNRFERAV---ELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQ 333
+ ++ E + A+ E + EFG S + V + G + GR+++AL F ++
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS-NVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 334 KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG 393
+ +GF P + +N L+ L + +K E++ M + P++ T N+V+ CKLG
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFS 453
V A+E+ + SPN + Y LI TLC + +EA + R + G PD TF+
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK- 512
+L LC +L + + P+ TY+ + +LC G++++ M ++
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 513 --VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL------------ 558
+ +Y +I GF K+N+ A + EM+ G +Y ++
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 559 -----HCLLHMDNPRTRFFNLL------------------EMMTHG-KPHCDIFNSFIDG 594
++ P +N L M ++G +P + + I G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 595 AMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST 654
A + ++A ++ +Q GI + V++ FR R+ ++A+ F ++ Q
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 655 KLYNRMIV--GLCKSDKA-DIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ IV GLC A++ E+L+ G P +L + L +L V L
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704
Query: 712 VNVYEKAGR 720
VN+ + R
Sbjct: 705 VNMVMQKAR 713
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 219/518 (42%), Gaps = 16/518 (3%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P + + V I+ L + +L A+ + S G VP + + ++ + E L
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAI-LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS-QFGLSPNYMAYKYLILTL 424
+ M E + V++N ++ FCK G V+ AL S Q G P+ + L+ L
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
C G K A ++ GY PD T++++ + LC+ ++ E ++LD + R PN+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNT 365
Query: 485 STYSRFVSALCRAGRVEDGYLM------RGDLDKVTARFSYAKMIMGFIKSNRGDIAARL 538
TY+ +S LC+ +VE+ + +G L V ++ +I G + +A L
Sbjct: 366 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVC---TFNSLIQGLCLTRNHRVAMEL 422
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI-FNSFIDGAMH 597
EM+ KG E +Y ++ L L +M G I +N+ IDG
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 598 ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTK-L 656
ANK A E+F+ M+ +G+ N+ + ++ +SRR+ DA + + + + K
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
YN ++ C+ A ++ M G P I Y L+ LC R A L+ +
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 717 KAGRRLTSFLGNVL---LFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLR 773
G LT N + LF + E + ++ + E S + G +G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 774 VSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKA 811
+ ++ L EL+ K F + + +L L M++
Sbjct: 663 IREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/557 (23%), Positives = 221/557 (39%), Gaps = 39/557 (7%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
AL F F P Y ++ RL R D+ ++L DM + T ++
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 387 CFFCKLGMVDVALELFNSR-SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS-SGTG 444
+ + + D L + + +FGL P+ Y + L L DG + + + S G
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRM-LNLLVDGNSLKLVEISHAKMSVWG 184
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
PD TF+ L ALCR ++ +L+ +P+ T++ V GY
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT----------VMQGY 234
Query: 505 LMRGDLDKVT-------------ARFSYAKMIMGFIKSNRGDIAARLLVEMK-EKGYELK 550
+ GDLD + S ++ GF K R + A + EM + G+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 551 RSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFE 609
+ ++ +++ L + + + M+ G P +NS I G + A EV +
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSD 668
M N + ++ + + ++ +A + + ++ +N +I GLC +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 669 KADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGN 728
+A+EL EM G P Y +L+ LCS + EA+N++ E +G + N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 729 VLL--FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIA 786
L+ F D E G +S +I RV + Q ++++I
Sbjct: 475 TLIDGFCKANKTREAEEIFD-EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 787 KCFPVDIYTYNLLMRKLTHH----DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGR 842
+ D YTYN L LTH D+ KA ++ M G EP+ TYG + G GR
Sbjct: 534 EGQKPDKYTYNSL---LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 843 KDEAKRWVHEMLKKGFN 859
+ A + + + KG N
Sbjct: 591 VEVASKLLRSIQMKGIN 607
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/524 (25%), Positives = 227/524 (43%), Gaps = 17/524 (3%)
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGY-ESHMTNV 244
K D A+ L G M + LL+++A+ N ++ + Q+ G +H T
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
I+I C++ +L A A L ++ G E + LS L+ C S R AV LV + +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 305 --LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKD 362
P + I GL + EA+ + ++G P V Y +++ L +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALI-DRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
+ LL M + + P ++ N ++ CK +D AL LF G+ PN + Y LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
LC G +A R+L PD TFS L +A +E K+ E L D ++R P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDL-------DKVTARFSYAKMIMGFIKSNRGDIA 535
+ TYS ++ C R+++ M + D VT Y +I GF K R +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT----YNTLIKGFCKYKRVEEG 415
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDG 594
+ EM ++G +Y ++ L + EM++ G P+ +N+ +DG
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 595 AMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST 654
K + A VFE +QR+ + + ++++ ++ ++ D F ++ + V
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 655 KL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
+ YN MI G C+ + A L EM + G P+ CY L++
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 11/380 (2%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQIC 233
+TL+ G + K A+ L+ RM +G D Y +++N L + + AF+++
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 234 MRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
+ + +I LCK +++A + G + S LI LC R+
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 294 AVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQ--KRDSEGFVPCKVRYNI 349
A L+S+ P + I V+ G+L EA + + + KR + P V Y+
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID---PSIVTYSS 366
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
LI +RL + ++ M P++VT N ++ FCK V+ +E+F SQ G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
L N + Y LI L G A + + G P+ T++TL + LC+ K+++
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGF 526
+ ++ + P TY+ + +C+AG+VEDG+ + +L + +Y MI GF
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Query: 527 IKSNRGDIAARLLVEMKEKG 546
+ + A L EMKE G
Sbjct: 547 CRKGSKEEADALFKEMKEDG 566
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/533 (21%), Positives = 225/533 (42%), Gaps = 31/533 (5%)
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L E +L D L +M ++ P+++ + +L K+ DV + L G+ N+
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
Y LI C A VL GY P+ T S+L N C +I E L+D
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIK 528
+ PN+ T++ + L + + + +D++ A+ +Y ++ G K
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL---IDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 529 SNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL---HMDNPRTRFFNLLEMMTHG-KPH 584
D+A LL +M++ E Y ++ L HMD+ F EM T G +P+
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF---KEMETKGIRPN 290
Query: 585 CDIFNSFIDGAMHANK-PDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
++S I + + D +R + ++++R I + + ++ ++ + ++ +A + +
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 644 ND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL 702
++ ++ + S Y+ +I G C D+ D A ++ M+ P + Y L++ C
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 703 KRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM-- 760
KR E + V+ + +R +GN + ++ +I D+ +E E + +
Sbjct: 410 KRVEEGME---VFREMSQR--GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 761 ----LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELF 815
++ ++ ++ E L IYTYN+++ + ++ +LF
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 816 DRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ +G++P+ Y M GF G K+EA EM + G P N +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 20/295 (6%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN----CYNAFDVIANQ 231
L+ + GK A L M + +D Y L+N ++ F+ + ++
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 232 ICMRGYESHMTNVIVIKHLCKQGRLEEA-----EAHLNGLVGSGKELHRSELSFLIGVLC 286
C ++ T +IK CK R+EE E GLVG + + LI L
Sbjct: 391 HCFPDVVTYNT---LIKGFCKYKRVEEGMEVFREMSQRGLVG-----NTVTYNILIQGLF 442
Query: 287 ESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
++ + A E+ E + N Y + GL + G+L++A+ F + S+ P
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTI 501
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
YNI+I + + +++D ++L +++ + P++V N ++ FC+ G + A LF
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ G PN Y LI DG + + +++ G+ D T + N L
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 187/843 (22%), Positives = 340/843 (40%), Gaps = 93/843 (11%)
Query: 112 DDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLR--DFRSCSFPH 169
D ++ LK + G +P Y TF R+L A ++ L+ D C P
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVY----TFTICIRVLGRAGKINEAYEILKRMDDEGCG-PD 292
Query: 170 RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIA 229
Y L+ A K D A + +M+ D Y LL+ ++N ++
Sbjct: 293 VVTYT-VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 230 NQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCES 288
+++ G+ + T I++ LCK G EA L+ + G + + LI L
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 289 NRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFF-------------- 331
+R + A+EL + G P Y V+I + G ALE F
Sbjct: 412 HRLDDALELFGNMESLGVK-PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 332 ---------RQKRDSE-----------GFVPCKVRYNILIGRLLRENRLKDVYELLMDMN 371
+ RD E G VP V YN+++ + + + +LL +M
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 372 ETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPK 431
E P+++ +N+++ K VD A ++F + L P + Y L+ L +G +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 432 EAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFV 491
EA + G P+ TF+TL + LC+ ++ +L ++ +P+ TY+ +
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 492 SALCRAGRVEDGYLMRGDLDKVTAR--FSYAKMIMGFIKS---------------NRGDI 534
L + G+V++ + K+ + ++ G +K+ N D
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 535 AARLLVE------MKEKGYELKRS-SYRHVLHCLLHMDN----PRTRFF----------N 573
A L E + E G + S S R V + + + P R+
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 574 LLEMMTHG---KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
L E T +P +N I G + A+ ++A++VF ++ G + + ++ ++ +Y
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 631 FRSRRISDALRFFNDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKV-GLNPS 688
+S +I + + ++ H+ +T +N +I GL K+ D AL+L ++++ +P+
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR 748
Y L+ L R YEA L G R + N+L+ + E +C +
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 749 RE-KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THH 806
R KEG D ++++ RV + +EL D+ YNL++ L H
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH 1010
Query: 807 DMDKACELFDRM-CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTR 865
+++A LF+ M RG+ P+ +TY + G +EA + +E+ + G P T
Sbjct: 1011 RLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTF 1070
Query: 866 NVI 868
N +
Sbjct: 1071 NAL 1073
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 169/763 (22%), Positives = 307/763 (40%), Gaps = 93/763 (12%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
FD L R ++TL+ G + D AL L G M G+ + Y + ++
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFID 441
Query: 215 SLAEN-NCYNAFDVIANQICMRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
++ + +A + ++ +G ++ + L K GR EA+ GL G
Sbjct: 442 YYGKSGDSVSALETF-EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 273 LHRSELSFLIGVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEF 330
+ ++ + + A++L+SE P I L + R+DEA +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
F + ++ + P V YN L+ L + ++++ EL M + PPN +T N + C
Sbjct: 561 FMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
K V +AL++ G P+ Y +I L +G KEA Y PD
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFV 678
Query: 451 TFSTLANALCRECKIDEMW--------------------DLLDFALERRFMPNSSTYS-R 489
T TL + + I++ + DL+ L + N+ ++S R
Sbjct: 679 TLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSER 738
Query: 490 FVS-ALCRAGRVEDGYLM---------------RGDLDKVTARF-------SYAKMIMGF 526
V+ +CR G D L+ R +K T +Y +I G
Sbjct: 739 LVANGICRDG---DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL 795
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHC 585
++++ +IA + +++K G ++Y +L F EM TH + +
Sbjct: 796 LEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANT 855
Query: 586 DIFNSFIDGAMHANKPDLAREVF-ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN 644
N I G + A D A +++ +LM A + ++ +S R+ +A + F
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 645 D-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLK 703
+ + + +YN +I G K+ +AD A L M+K G+ P ++ Y VLV LC +
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 704 RYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL 763
R E ++ +++G ++P+V C + L
Sbjct: 976 RVDEGLHYFKELKESG----------------LNPDVV--CYN----------------L 1001
Query: 764 IIGAFSGCLRVSYSIQELEEL-IAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQR 821
II R+ ++ E+ ++ D+YTYN L+ L M ++A ++++ + +
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 822 GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
GLEPN +T+ + G+S G+ + A M+ GF+P T
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 160/741 (21%), Positives = 296/741 (39%), Gaps = 64/741 (8%)
Query: 166 SFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE----NNC 221
F + + +L+VG D + LL M GL + + + I + L N
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 222 YNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL 281
Y + ++ C +T ++I LC +L+ A+ + +G+ H+ +
Sbjct: 278 YEILKRMDDEGCG---PDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGR--HKPDRVTY 331
Query: 282 IGVLCESNRFE--RAVELVSEFGTSL------PLENAYGVWIRGLVQGGRLDEALEFFRQ 333
I +L +RF R ++ V +F + + P + + + L + G EA +
Sbjct: 332 ITLL---DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 334 KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG 393
RD +G +P YN LI LLR +RL D EL +M + P T + ++ K G
Sbjct: 389 MRD-QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFS 453
ALE F G++PN +A + +L G +EA ++ G PD T++
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV 513
+ + +IDE LL +E P+ + ++ L +A RV++ + M + ++
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 514 TAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR 570
+ +Y ++ G K+ + A L M +KG ++ + CL D
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 571 FFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
L +MM G P +N+ I G + + A F M++ + + + ++
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 686
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALE--LCFEMLKVGLNP 687
++ I DA + +++ LYN C A++ E + + + G++
Sbjct: 687 VVKASLIEDAYK---------IITNFLYN------CADQPANLFWEDLIGSILAEAGIDN 731
Query: 688 SIECYEVLVQK---------LCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV-------LL 731
++ E LV L + RY N V+ + T LG LL
Sbjct: 732 AVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 732 FHSMISPEVYHSCVD--LRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF 789
++ ++ D L+ + G D + ++ A+ ++ + +E+
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Query: 790 PVDIYTYNLLMRKLTHH-DMDKACEL-FDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAK 847
+ T+N+++ L ++D A +L +D M R P TYG + G S GR EAK
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 848 RWVHEMLKKGFNPPENTRNVI 868
+ ML G P N++
Sbjct: 912 QLFEGMLDYGCRPNCAIYNIL 932
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 123/552 (22%), Positives = 224/552 (40%), Gaps = 39/552 (7%)
Query: 309 NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLM 368
N Y + L G L +A R+ R+ GFV YN LI LL+ + E+
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREF-GFVLNAYSYNGLIHLLLKSRFCTEAMEVYR 212
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
M P++ T ++++ K +D + L GL PN + I L G
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
EAY +L+ G PD T++ L +ALC K+D ++ + R P+ TY
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
+ D + DLD V +S EM++ G+
Sbjct: 333 TLL----------DRFSDNRDLDSVKQFWS----------------------EMEKDGHV 360
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREV 607
++ ++ L N F L M G P+ +N+ I G + ++ D A E+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLY-NRMIVGLCK 666
F M+ G+ A + I+ + Y +S AL F ++ + + + N + L K
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 667 SDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFL 726
+ + A ++ + + +GL P Y ++++ + EA+ L++ + G +
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 727 GNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT--LIIGAFSGCLRVSYSIQELEEL 784
N L+ + V + R KE + L +++T ++ ++ +I+ E +
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMK-LKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Query: 785 IAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRK 843
+ K P + T+N L L +D + A ++ +M G P+ +TY + G +G+
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQV 659
Query: 844 DEAKRWVHEMLK 855
EA + H+M K
Sbjct: 660 KEAMCFFHQMKK 671
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 155/343 (45%), Gaps = 12/343 (3%)
Query: 121 KFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFD-FLRDFRSCSFPHRARYHDTLVV 179
KF G QP+ T+ + L A + + D FL+ + P A Y+ L+
Sbjct: 774 KFTKDLGVQPKL----PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN-FLLD 828
Query: 180 GYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICMRGYE 238
Y +GK D L M + + ++I+++ L + N +A D+ + + R +
Sbjct: 829 AYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Query: 239 -SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVEL 297
+ T +I L K GRL EA+ G++ G + + + LI ++ + A L
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 298 VSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
P Y V + L GR+DE L +F++ ++S G P V YN++I L
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLG 1007
Query: 356 RENRLKDVYELLMDMNET-CIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+ +RL++ L +M + I P++ T N+++ GMV+ A +++N + GL PN
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
+ LI G P+ AY V ++ G+ P+ T+ L N
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 124/561 (22%), Positives = 219/561 (39%), Gaps = 44/561 (7%)
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
RGL D + +F+ + V N ++ L + +L+++ + M + I
Sbjct: 90 RGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRII 149
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
+ T + G + A +FG N +Y LI L EA
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
V R G+ P +T+S+L L + ID + LL PN T++ + L
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 496 RAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
RAG++ + Y + +D +Y +I + + D A + +MK ++ R
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 553 SYRHVLHCLLH---MDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFE 609
+Y +L +D+ + +F++ +E H P F +D A A + +
Sbjct: 330 TYITLLDRFSDNRDLDSVK-QFWSEMEKDGH-VPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTK-LYNRMIVGLCKSD 668
+M+ GI+ N + ++ R R+ DAL F ++ V T Y I KS
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 669 KADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGN 728
+ ALE +M G+ P+I C+ Y A KAGR +
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVA--------CNASLYSLA--------KAGRDREA---- 487
Query: 729 VLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKC 788
++++ D+ G DS +++ +S + +I+ L E++
Sbjct: 488 ---------KQIFYGLKDI-----GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 789 FPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAK 847
D+ N L+ L D +D+A ++F RM + L+P TY + G +G+ EA
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 848 RWVHEMLKKGFNPPENTRNVI 868
M++KG P T N +
Sbjct: 594 ELFEGMVQKGCPPNTITFNTL 614
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 6/285 (2%)
Query: 279 SFLIGVLCESNRFERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRD 336
+FL+ +S + + EL E T N + + I GLV+ G +D+AL+ +
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
F P Y LI L + RL + +L M + PN N ++ F K G D
Sbjct: 884 DRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A LF + G+ P+ Y L+ LC G E + +G PD ++ +
Sbjct: 944 AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003
Query: 457 NALCRECKIDEMWDLL-DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA 515
N L + +++E L + R P+ TY+ + L AG VE+ + ++ +
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 516 R---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
F++ +I G+ S + + A + M G+ +Y +
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 133/593 (22%), Positives = 236/593 (39%), Gaps = 77/593 (12%)
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
GLV G + D+A++ FR S P + +N L + + + + V L M I
Sbjct: 63 GLV-GIKADDAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
++ T++ ++ FC+ + A + G P+ + + L+ LC + EA +
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
+ G+ P T +TL N LC K+ + L+D +E F PN TY ++ +C+
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 497 AGR-------------------------VEDGYLMRGDLDKVTARF-------------S 518
+G+ + DG G LD F +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM 578
Y +I GF + R D A+LL +M ++ ++ ++ + R L EMM
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 579 THG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G P+ +NS IDG N+ + A ++ +LM G + + +++ Y ++ RI
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 638 DALRFFNDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
D L F ++ V+ +T YN ++ G C+S K ++A +L EM+ + P I Y++L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFL 756
LC +A+ + EK+ L
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKME----------------------------------L 506
Query: 757 DSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELF 815
D + +II +V + L K +D YN+++ +L D + KA LF
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 816 DRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+M + G P+ TY ++ A + EM GF +T ++
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 134/579 (23%), Positives = 241/579 (41%), Gaps = 40/579 (6%)
Query: 129 QPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPD 188
Q R T F +F ++ + LV + S H ++ + K
Sbjct: 81 QSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 189 IALHLLGRMRFQGLDLDGFGYHILLNSLA-ENNCYNAFDVIANQICMRGYESHMTNVIVI 247
A +G++ G + D ++ LLN L E A +++ + M + +T ++
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV 200
Query: 248 KHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT-SLP 306
LC G++ +A ++ +V +G + + ++ V+C+S + A+EL+ + ++
Sbjct: 201 NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 307 LENA-YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
L+ Y + I GL + G LD A F + + +GF + YN LIG R D +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNE-MEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
LL DM + I PN+VT + ++ F K G + A +L Q G++PN + Y LI C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
+ +EA +++ G PD TF+ L N C+ +ID+ +L R + N+
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEK 545
TY+ V C++G++E +A +L EM +
Sbjct: 440 TYNTLVQGFCQSGKLE--------------------------------VAKKLFQEMVSR 467
Query: 546 GYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD--IFNSFIDGAMHANKPDL 603
SY+ +L L + + + + K D I+ I G +A+K D
Sbjct: 468 RVRPDIVSYKILLDGLCD-NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDD 526
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIV 662
A ++F + G+ +A + +++ R +S A F + + +L YN +I
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
D A A EL EM G + ++++ L S
Sbjct: 587 AHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 191/423 (45%), Gaps = 7/423 (1%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P Y + I + + G ++ A F + + G VP V YN +I + RL D
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMK-FRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
+M + C P+++T NA++ FCK G + + LE + GL PN ++Y L+ C
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
+G ++A + G P+ T+++L +A C+ + + + L + L+ N
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 438
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEM 542
TY+ + LC A R+++ + G +D + SY +I GF+K+ D A LL E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 543 KEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKP 601
K +G + Y + L ++ + EM G K + I+ + +D + P
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ--VVVSTKLYNR 659
+ + M+ I + +++ +++ +S A+ +FN I + + + ++
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 660 MIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
MI GLCK ++ + A L +M++ GL P Y L+ EA+ L + + G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 720 RRL 722
+L
Sbjct: 679 MKL 681
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 227/550 (41%), Gaps = 23/550 (4%)
Query: 281 LIGVLCESNRFERAVELVSEFGT--SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
L VL + E A++ S+ P + + + G+ D+ FF+ +
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA- 256
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G P YNI+I + +E ++ L +M + P+ VT N+++ F K+G +D
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ F P+ + Y LI C G R G G P+ ++STL +A
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 459 LCRECKIDEMWDLLDFALERR---FMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA 515
C+E M + F ++ R +PN TY+ + A C+ G + D + + ++ +V
Sbjct: 377 FCKE---GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 516 RF---SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+ +Y +I G + R A L +M G +SY ++H + N
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 573 NLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
L E+ G KP ++ +FI G K + A+ V M+ GI N+ +M +YF
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 632 RSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLK--VGLNPS 688
+S ++ L ++++ + V+ + +I GLCK+ A++ F + GL +
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY-FNRISNDFGLQAN 612
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR 748
+ ++ LC + A L + G L+ + V +
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA--L 670
Query: 749 REKEGEF---LDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF-PVDIYTYNLLMRKLT 804
R+K E LD T ++ S C ++ + LEE+I + P ++ ++L +
Sbjct: 671 RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 730
Query: 805 HHDMDKACEL 814
+D+A EL
Sbjct: 731 LGCIDEAVEL 740
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 112/535 (20%), Positives = 224/535 (41%), Gaps = 18/535 (3%)
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
VP ++ L L+ L++ + M + P + N +L F KLG D
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
F G P Y +I +C +G + A + G PD T++++ +
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 461 RECKIDEMWDLLDFALERRFM---PNSSTYSRFVSALCRAGRVEDGYL----MRGDLDKV 513
+ ++D D + F E + M P+ TY+ ++ C+ G++ G M+G+ K
Sbjct: 309 KVGRLD---DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 514 TARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
SY+ ++ F K A + V+M+ G +Y ++ + N F
Sbjct: 366 NV-VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 574 LLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
EM+ G + + + + IDG A + A E+F M G++ N +S ++ + +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 633 SRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
++ + AL N+++ + + LY I GLC +K + A + EM + G+ +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 692 YEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREK 751
Y L+ E ++L++ ++ +T VL+ + ++ VD
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI-DGLCKNKLVSKAVDYFNRI 603
Query: 752 EGEF---LDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR-KLTHHD 807
+F ++++ T +I +V + E+++ K D Y LM +
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 808 MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPE 862
+ +A L D+M + G++ + Y + G S+ + +A+ ++ EM+ +G +P E
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 166/400 (41%), Gaps = 15/400 (3%)
Query: 156 FDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNS 215
F+ ++D C P Y+ L+ + GK I L M+ GL + Y L+++
Sbjct: 320 FEEMKDM--CCEPDVITYN-ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 216 LAENNCYNA---FDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
+ F V ++ + E T++I CK G L +A N ++ G E
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN--CKIGNLSDAFRLGNEMLQVGVE 434
Query: 273 LHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEF 330
+ + LI LC++ R + A EL + T+ +P +Y I G V+ +D ALE
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
+ + G P + Y I L +++ ++ +M E I N + ++ +
Sbjct: 495 LNELK-GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL-RSSSGTGYFPDR 449
K G L L + + + + + LI LC + +A R S+ G +
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
F+ + + LC++ +++ L + +++ +P+ + Y+ + + G V + +R
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 510 LDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+ ++ + +Y ++ G N+ A L EM +G
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 235/542 (43%), Gaps = 27/542 (4%)
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE-LLMDMNETCIPPNMVTM 382
+D+AL + + GF+P + YN ++ +R R E + +M E+ + PN+ T
Sbjct: 150 IDKALSIVHLAQ-AHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N ++ FC G +DVAL LF+ G PN + Y LI C + +++LRS +
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
G P+ +++ + N LCRE ++ E+ +L R + + TY+ + C+ G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 503 GYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
+M ++ + + +Y +I K+ + A L +M+ +G +Y ++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 560 CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT 618
+ L EM +G P +N+ I+G K + A V E M+ G+
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 619 NASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELC 677
+ S V+ + RS + +ALR + + + T Y+ +I G C+ + A +L
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 678 FEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
EML+VGL P Y L+ C +A+ L N + G L +V+ + +I+
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG-----VLPDVVTYSVLIN 563
Query: 738 PEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
S R +E + L L + S V+Y LI C ++ +
Sbjct: 564 GLNKQS-----RTREAKRL----LLKLFYEESVPSDVTY-----HTLIENCSNIEFKSVV 609
Query: 798 LLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
L++ M +A ++F+ M + +P+ Y +M HG G +A EM+K
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 857 GF 858
GF
Sbjct: 670 GF 671
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/522 (23%), Positives = 225/522 (43%), Gaps = 27/522 (5%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ GY K D LL M +GL+ + Y++++N L + ++
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 234 MRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
RGY +T +IK CK+G +A ++ G + LI +C++
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 293 RAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
RA+E + + P E Y + G Q G ++EA R+ D+ GF P V YN L
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNAL 421
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I +++D +L DM E + P++V+ + VL FC+ VD AL + + G+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
P+ + Y LI C KEA + G PD T++ L NA C E +++
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIMGFI 527
L + +E+ +P+ TYS ++ L + R + + L + V + +Y +I
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI---- 597
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI 587
N +I + +V + KG+ C+ M + F + H KP
Sbjct: 598 -ENCSNIEFKSVVSLI-KGF------------CMKGMMTEADQVFESMLGKNH-KPDGTA 642
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR 647
+N I G A A +++ M ++G + + + I ++K+ + ++++ +
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 648 HQVVVSTKLYNRMIVGLC-KSDKADIALELCFEMLKVGLNPS 688
+S +++V + + D+ L++ EM K G P+
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 192/455 (42%), Gaps = 49/455 (10%)
Query: 271 KELHRSELS-------FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQG 321
KE+ S++S LI C + + A+ L + T LP Y I G +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
++D+ + R +G P + YN++I L RE R+K+V +L +MN + VT
Sbjct: 254 RKIDDGFKLLRSMA-LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
N ++ +CK G AL + + GL+P+ + Y LI ++C G A L
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
G P+ RT++TL + ++ ++E + +L + F P+ TY+ ++ C G++E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 502 DGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
D + D+ + SY+ ++ GF +S D A R+ EM EKG
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI----------- 481
Query: 559 HCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT 618
KP ++S I G + A +++E M R G+
Sbjct: 482 -----------------------KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 619 NASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELC 677
+ + ++ +Y + AL+ N+ + V+ Y+ +I GL K + A L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 678 FEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
++ PS Y L++ CS + V+L+
Sbjct: 579 LKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVSLI 612
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 195/494 (39%), Gaps = 74/494 (14%)
Query: 377 PNMVTMNAVLCFFCKLGM-VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
P +++ NAVL + + A +F + +SPN Y LI C+ G A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
+ G P+ T++TL + C+ KID+ + LL + PN +Y+ ++ LC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 496 RAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYR 555
R GR+++ + F+ L EM +GY L +Y
Sbjct: 287 REGRMKE---------------------VSFV-----------LTEMNRRGYSLDEVTYN 314
Query: 556 HVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRN 614
++ N EM+ HG P + S I A + A E + M+
Sbjct: 315 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 615 GIMTNASSQILVMKSYFRSRRISDA---LRFFNDIRHQVVVSTKLYNRMIVGLCKSDKAD 671
G+ N + ++ + + +++A LR ND V T YN +I G C + K +
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT--YNALINGHCVTGKME 432
Query: 672 IALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL 731
A+ + +M + GL+P + Y ++ C R Y+ + V + +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFC---RSYDVDEALRVKRE-------------M 476
Query: 732 FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPV 791
I P D+ + +I F R + EE++ P
Sbjct: 477 VEKGIKP------------------DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 792 DIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWV 850
D +TY L+ D++KA +L + M ++G+ P+ TY ++ +G + R EAKR +
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 851 HEMLKKGFNPPENT 864
++ + P + T
Sbjct: 579 LKLFYEESVPSDVT 592
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 186/447 (41%), Gaps = 47/447 (10%)
Query: 432 EAYRVLRSSSGTGYFPDRRTFSTLANALCRECK-IDEMWDLLDFALERRFMPNSSTYSRF 490
+A ++ + G+ P +++ + +A R + I ++ LE + PN TY+
Sbjct: 152 KALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNIL 211
Query: 491 VSALCRAGRVE------DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKE 544
+ C AG ++ D +G L V +Y +I G+ K + D +LL M
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVV---TYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI-FNSFIDGAMHANKPDL 603
KG E SY V++ L + F L EM G ++ +N+ I G
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR-HQVVVSTKLYNRMIV 662
A + M R+G+ + + ++ S ++ ++ A+ F + +R + + + Y ++
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
G + + A + EM G +PS+ Y L+ C + +A+ ++ ++ G
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG--- 445
Query: 723 TSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELE 782
+SP+V + ++ F V +++
Sbjct: 446 -------------LSPDVVS------------------YSTVLSGFCRSYDVDEALRVKR 474
Query: 783 ELIAKCFPVDIYTYNLLMRKLTHHDMDK-ACELFDRMCQRGLEPNRWTYGLMAHGFSNHG 841
E++ K D TY+ L++ K AC+L++ M + GL P+ +TY + + + G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 842 RKDEAKRWVHEMLKKGFNPPENTRNVI 868
++A + +EM++KG P T +V+
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVL 561
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 18/278 (6%)
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRR-ISDALRFFND-IRHQVVVSTKLYNR 659
D A + L Q +G M S V+ + RS+R IS A F + + QV + YN
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNI 210
Query: 660 MIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
+I G C + D+AL L +M G P++ Y L+ C L++ + L+
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLR-----S 265
Query: 720 RRLTSFLGNVLLFHSMIS--------PEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGC 771
L N++ ++ +I+ EV ++ R G LD +I +
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR--GYSLDEVTYNTLIKGYCKE 323
Query: 772 LRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTY 830
++ E++ + TY L+ + +M++A E D+M RGL PN TY
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 831 GLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ GFS G +EA R + EM GF+P T N +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 32/324 (9%)
Query: 156 FDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNS 215
+ LR+ F ++ L+ G+ + GK + A+ +L M+ +GL D Y +L+
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 216 LAENNCYNAFDVIANQICMRGYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELH 274
+ + + ++ +G + +T +I+ C+Q R +EA ++ G
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 275 RSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEA----L 328
+ LI C E+A++L +E LP Y V I GL + R EA L
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
+ F ++ VP V Y+ LI E C ++ +++
Sbjct: 580 KLFYEES-----VPSDVTYHTLI--------------------ENCSNIEFKSVVSLIKG 614
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
FC GM+ A ++F S P+ AY +I C G ++AY + + +G+
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 449 RRTFSTLANALCRECKIDEMWDLL 472
T L AL +E K++E+ ++
Sbjct: 675 TVTVIALVKALHKEGKVNELNSVI 698
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/587 (22%), Positives = 233/587 (39%), Gaps = 76/587 (12%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+ D+A++ FR S P + ++ L + + + V L M I N+ T+
Sbjct: 68 KADDAIDLFRDMIHSRPL-PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
+ ++ FC+ + +A + G PN + + LI LC +G EA ++
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR--- 499
G+ PD T +TL N LC K E L+D +E PN+ TY ++ +C++G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 500 ----------------------VEDGYLMRGDLDK-------------VTARFSYAKMIM 524
+ DG G LD T +Y +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 525 GFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KP 583
GF + R D A+LL +M ++ ++ ++ + R EM+ G P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 584 HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
+ S IDG N D A ++ +LM G N + +++ Y ++ RI D L F
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 644 NDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL 702
+ VV T YN +I G C+ K ++A EL EM+ + P+I Y++L+ LC
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD- 485
Query: 703 KRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT 762
E+ + ++EK EK LD +
Sbjct: 486 --NGESEKALEIFEKI-------------------------------EKSKMELDIGIYN 512
Query: 763 LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQR 821
+II +V + L K + TYN+++ L + +A LF +M +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 822 GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G P+ WTY ++ G ++ + + E+ + GF+ +T ++
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/591 (22%), Positives = 249/591 (42%), Gaps = 66/591 (11%)
Query: 140 VAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRF 199
+ +FR + +R P V DF R F + A + D+ L L +M
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSA----------------IAKTKQYDLVLALCKQMEL 116
Query: 200 QGLDLDGFGYHILLNSLAENNCYN---AFDVIANQICMRGYESH-MTNVIVIKHLCKQGR 255
+G+ + + I++N C AF + +I GYE + +T +I LC +GR
Sbjct: 117 KGIAHNLYTLSIMINCFCR--CRKLCLAFSAMG-KIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 256 LEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS---EFGTSLPLENAYG 312
+ EA ++ +V G + ++ L+ LC S + A+ L+ E+G P YG
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQ-PNAVTYG 232
Query: 313 VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNE 372
+ + + G+ A+E R K + V+Y+I+I L + L + + L +M
Sbjct: 233 PVLNVMCKSGQTALAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 373 TCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKE 432
I N++T N ++ FC G D +L + ++PN + + LI + +G +E
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 433 AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVS 492
A + + G PD T+++L + C+E +D+ ++D + + PN T++ ++
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 493 ALCRAGRVEDGYLM--RGDLDKVTA-RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
C+A R++DG + + L V A +Y +I GF + + ++A L EM +
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV-- 469
Query: 550 KRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFE 609
P+ + +DG + + A E+FE
Sbjct: 470 --------------------------------PPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSD 668
++++ + + +++ + ++ DA F + + V K YN MI GLCK
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 669 KADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
A L +M + G P Y +L++ ++V L+ ++ G
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 182/402 (45%), Gaps = 12/402 (2%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCY-NAFD 226
P+ Y L V +G+ +A+ LL +M + + LD Y I+++ L ++ NAF+
Sbjct: 226 PNAVTYGPVLNV-MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 227 VIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ N++ M+G +++ T I+I C GR ++ L ++ + S LI
Sbjct: 285 LF-NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 286 CESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVP 342
+ + A EL E G + P Y I G + LD+A + S+G P
Sbjct: 344 VKEGKLREAEELHKEMIHRGIA-PDTITYTSLIDGFCKENHLDKANQMVDLMV-SKGCDP 401
Query: 343 CKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELF 402
+NILI + NR+ D EL M+ + + VT N ++ FC+LG ++VA ELF
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 403 NSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRE 462
+ PN + YK L+ LC +G ++A + + D ++ + + +C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 463 CKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSY 519
K+D+ WDL + P TY+ + LC+ G + + L+ +++ ++Y
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 520 AKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+I + + +L+ E+K G+ + S+ + V+ L
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 174/410 (42%), Gaps = 15/410 (3%)
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD-KVTAR--FS 518
+ K D+ DL + R +P +SR SA+ + + + + ++ K A ++
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLE 576
+ MI F + + +A + ++ + GYE ++ +++ CL + + +
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
M H KP N+ ++G + K A + + M G NA + V+ +S +
Sbjct: 186 EMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 637 SDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+ A+ + + + + Y+ +I GLCK D A L EM G+ +I Y +L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 696 VQKLCSLKRYYEAVNLVN--VYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE--K 751
+ C+ R+ + L+ + K + +F +L S + +L +E
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF---SVLIDSFVKEGKLREAEELHKEMIH 361
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDK 810
G D+ T +I F + + Q ++ +++K +I T+N+L+ + +D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 811 ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
ELF +M RG+ + TY + GF G+ + AK EM+ + P
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 176/778 (22%), Positives = 301/778 (38%), Gaps = 97/778 (12%)
Query: 113 DGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDF-LRDFRSCSFPHRA 171
D D + L F W + PR+ H+ ++ ++ +L +VF L +SC A
Sbjct: 100 DLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDA 159
Query: 172 RYHDTLVVGYAIAGKPDIALHLLGRMRFQ-GLDLDGFGYHILLNSLAENNCYNAF----- 225
Y D+ + RF+ L Y+ LLNSLA +
Sbjct: 160 LY------------VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 226 DVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+++ +++C Y T ++ CK G +EEA +++ +V +G + + LI
Sbjct: 208 EMLEDKVCPNIY----TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 286 CESNRFERAVELVSEFGTSLPL------ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
C+ + A ++ +E +PL E AY I GL R+DEA++ F + +D E
Sbjct: 264 CQRKDLDSAFKVFNE----MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDEC 319
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
F P Y +LI L R + L+ +M ET I PN+ T ++ C + A
Sbjct: 320 F-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
EL + GL PN + Y LI C G ++A V+ P+ RT++ L
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY---LMRGDLDKVTAR 516
C+ + + +L+ LER+ +P+ TY+ + CR+G + Y + D V +
Sbjct: 439 CKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
++Y MI KS R + A L +++KG
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGV----------------------------- 528
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
P+ ++ + IDG A K D A + E M + N+ + ++ ++
Sbjct: 529 -----NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 637 SDALRF---FNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
+A I Q VST +I L K D A +ML G P Y
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTI--LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL--FHSMISPEVYHSCVDLRREK 751
+Q C R +A +++ + G F + L+ + + + R+
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKA 811
E + L+LI L + Y Q+ E P N++ + D
Sbjct: 702 GCEPSQHTFLSLI----KHLLEMKYGKQKGSE------PELCAMSNMM-------EFDTV 744
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK-KGFNPPENTRNVI 868
EL ++M + + PN +Y + G G A++ M + +G +P E N +
Sbjct: 745 VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 133/619 (21%), Positives = 243/619 (39%), Gaps = 95/619 (15%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSL-AENNCYNAFDVIANQI 232
+ +L++GY D A + M +G + Y L++ L A D+
Sbjct: 256 YTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK 315
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+ + T ++IK LC R EA + + +G + + + LI LC +FE
Sbjct: 316 DDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
Query: 293 RAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEAL---EFFRQKRDS---------- 337
+A EL+ + +P Y I G + G +++A+ E ++ S
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI 435
Query: 338 EGF--------------------VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
+G+ +P V YN LI R Y LL MN+ + P
Sbjct: 436 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
+ T +++ CK V+ A +LF+S Q G++PN + Y LI C G EA+ +L
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL--------------LDFALERRFM-- 481
P+ TF+ L + LC + K+ E L D L R +
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 482 -------------------PNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSY 519
P++ TY+ F+ CR GR+ D M + + F+Y
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 520 AKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMT 579
+ +I G+ + + A +L M++ G E + ++ ++ LL M + +
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK--------- 726
Query: 580 HGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDA 639
+P ++ ++ D E+ E M + + NA S ++ + A
Sbjct: 727 GSEPELCAMSNMMEF-------DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 640 LRFFNDIRHQVVVSTK--LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
+ F+ ++ +S ++N ++ CK K + A ++ +M+ VG P +E +VL+
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLI- 838
Query: 698 KLCSLKRYYEAVNLVNVYE 716
C L + E +V++
Sbjct: 839 --CGLYKKGEKERGTSVFQ 855
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 204/501 (40%), Gaps = 34/501 (6%)
Query: 157 DFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDI--ALHLLGRMRFQGLDLDGFGYHILLN 214
D + S R ++ L+ GY K ++ A+ +L +M + + D Y+ L++
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYC---KSNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 215 SLAENNCYNAFDVIANQICMRG-YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
+ +++ + + + RG T +I LCK R+EEA + L G
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 274 HRSELSFLIGVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFF 331
+ + LI C++ + + A ++ + LP + I GL G+L EA
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLL 589
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+K G P ILI RLL++ Y M + P+ T + +C+
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
G + A ++ + G+SP+ Y LI G A+ VL+ TG P + T
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 452 FSTLAN------------------ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSA 493
F +L A+ + D + +LL+ +E PN+ +Y + +
Sbjct: 710 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 769
Query: 494 LCRAG--RVEDGYL--MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
+C G RV + M+ + + + ++ K + + AA+++ +M G+
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Query: 550 KRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD--IFNSFIDGAMHANKPDLAREV 607
+ S + VL C L+ + R ++ + + + D + IDG + E+
Sbjct: 830 QLESCK-VLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 608 FELMQRNGIMTNASSQILVMK 628
F +M++NG ++ + L+++
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIE 909
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 161/701 (22%), Positives = 296/701 (42%), Gaps = 53/701 (7%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQI 232
++T++ Y G+ A+ LL M+ +G+D D Y++L++ L +N + ++ +
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLI-GVLCESNRF 291
+ + +T +I +G++ A LN ++ G + + LI G + E N F
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN-F 389
Query: 292 ERAVEL--VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFF-RQKRDSEGFVPCKVRYN 348
+ A+++ + E P E +YGV + GL + D A F+ R KR+ G ++ Y
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN--GVCVGRITYT 447
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
+I L + L + LL +M++ I P++VT +A++ FCK+G A E+ +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
GLSPN + Y LI C GC KEA R+ + G+ D TF+ L +LC+ K+ E
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMG 525
+ + +PN+ ++ ++ +G + + ++ KV F+Y ++ G
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKG 627
Query: 526 FIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PH 584
K A + L + + Y +L + N EM+ P
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Query: 585 CDIFNSFIDGAMHANKPDLARE-VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF- 642
+ S I G K +A E R ++ N + F++ + + F
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747
Query: 643 --FNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
+++ H + T N MI G + K + +L EM P++ Y +L+
Sbjct: 748 EQMDNLGHTPDIVTT--NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHG-- 803
Query: 701 SLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM 760
Y K TSF LL+ S+I + + G +S+M
Sbjct: 804 --------------YSKRKDVSTSF----LLYRSIILNGILPDKLTCHSLVLG-ICESNM 844
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK-LTHHDMDKACELFDRMC 819
L + ++ L+ I + VD YT+N+L+ K + +++ A +L M
Sbjct: 845 LEI-------------GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
G+ ++ T M + + R E++ +HEM K+G +P
Sbjct: 892 SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 932
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 133/600 (22%), Positives = 231/600 (38%), Gaps = 48/600 (8%)
Query: 276 SELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQ 333
+ + LI VLC FE++ L+ + S P Y + + GR A+E
Sbjct: 234 ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDH 293
Query: 334 KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG 393
+ S+G YN+LI L R NR+ Y LL DM + I PN VT N ++ F G
Sbjct: 294 MK-SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEG 352
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFS 453
V +A +L N FGLSPN++ + LI +G KEA ++ G P ++
Sbjct: 353 KVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV 513
L + LC+ + D TY+ + LC+ G +++ ++ ++ K
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472
Query: 514 TAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPR 568
+Y+ +I GF K R A ++ + G Y +++ C +
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
R + + + H + H FN + A K A E M +GI+ N S ++
Sbjct: 533 IRIYEAMILEGHTRDHF-TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 629 SYFRSRRISDALRFFNDIR----------------------------------HQV--VV 652
Y S A F+++ H V V
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
T +YN ++ +CKS A+ L EM++ + P Y L+ LC + A+
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 713 NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKE--GEFLDSSMLTLIIGAFSG 770
E G L + + M + + + R + + G D +I +S
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771
Query: 771 CLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWT 829
++ + L E+ + ++ TYN+L+ + D+ + L+ + G+ P++ T
Sbjct: 772 MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 172/788 (21%), Positives = 310/788 (39%), Gaps = 93/788 (11%)
Query: 158 FLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNS-L 216
LRD R ++TL+ G++ GK IA LL M GL + ++ L++ +
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 217 AENNCYNA------------------FDVIANQIC-------MRGYESHM---------- 241
+E N A + V+ + +C RG+ M
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 242 TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF 301
T +I LCK G L+EA LN + G + S LI C+ RF+ A E+V
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 302 ---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
G S P Y I + G L EA+ + + EG +N+L+ L +
Sbjct: 505 YRVGLS-PNGIIYSTLIYNCCRMGCLKEAIRIY-EAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
++ + E + M I PN V+ + ++ + G A +F+ ++ G P + Y
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
L+ LC G +EA + L+S D ++TL A+C+ + + L ++R
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDGYLM------RGDLDKVTARFSYAKMIMGFIKSNRG 532
+P+S TY+ +S LCR G+ L RG++ + + Y + G K+ +
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV--LPNKVMYTCFVDGMFKAGQW 740
Query: 533 DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH-GKPHCDIFNSF 591
+M G+ + ++ M L EM G P+ +N
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 592 IDGAMHANKPDLARE--VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRH 648
+ G ++ + D++ ++ + NGI+ + + ++ S + L+ I
Sbjct: 801 LHG--YSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 858
Query: 649 QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEA 708
V V +N +I C + + + A +L M +G++ + + +V L R+ E+
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 709 -------------------VNLVNVYEKAGRRLTSF-LGNVLLFHSMISPEVYHSCVDLR 748
+ L+N + G T+F + ++ H + P V S +
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 749 REKEGE---------FLDSSMLTLIIGAFSG----CLRVSYSIQELE--ELIAKC-FPVD 792
K G+ F+ L I +F+ C + I+ LE +++ C +D
Sbjct: 979 LAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLD 1038
Query: 793 IYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHG-FSNHGRKDEAKRWV 850
+ +YN+L+ L DM A EL++ M G N TY + G + A +
Sbjct: 1039 LVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098
Query: 851 HEMLKKGF 858
++L +GF
Sbjct: 1099 KDLLARGF 1106
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 126/554 (22%), Positives = 214/554 (38%), Gaps = 103/554 (18%)
Query: 309 NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLM 368
+ Y + IR ++ G + ++LE FR GF P N ++G +++ V+ L
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRL-MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLK 222
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
+M + I P++ T N ++ C G + + L + G +P + Y ++ C G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
K A +L G D T++ L + LCR +I + + LL +R PN TY+
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
++ G+V IA++LL EM G
Sbjct: 343 TLINGFSNEGKVL--------------------------------IASQLLNEMLSFGL- 369
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVF 608
+P FN L IDG + A ++F
Sbjct: 370 -----------------SPNHVTFNAL----------------IDGHISEGNFKEALKMF 396
Query: 609 ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKS 667
+M+ G+ + S +++ ++ A F+ + R+ V V Y MI GLCK+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 668 DKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLG 727
D A+ L EM K G++P I Y L+ C + R+ A +V + G
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG-----LSP 511
Query: 728 NVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK 787
N +++ ++I Y+ C GCL+ +I+ E +I +
Sbjct: 512 NGIIYSTLI----YNCCR-----------------------MGCLK--EAIRIYEAMILE 542
Query: 788 CFPVDIYTYNLLMRKLTHHDMDKACELFDR-MCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
D +T+N+L+ L E F R M G+ PN ++ + +G+ N G +A
Sbjct: 543 GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Query: 847 KRWVHEMLKKGFNP 860
EM K G +P
Sbjct: 603 FSVFDEMTKVGHHP 616
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 135/644 (20%), Positives = 251/644 (38%), Gaps = 45/644 (6%)
Query: 103 VLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFR-------------ILSCA 149
+L + G D DI++ + + RF + I+R I +C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 150 RLRPLVFDFLRDFRSCSFPHRARYH---DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDG 206
R+ L + +R + + R H + LV AGK A + M G+ +
Sbjct: 525 RMGCLK-EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 207 FGYHILLNSLAENN-CYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNG 265
+ L+N + AF V + + + T ++K LCK G L EAE L
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 266 LVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGR 323
L + + L+ +C+S +AV L E + LP Y I GL + G+
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
A+ F ++ +P KV Y + + + + K M+ P++VT N
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
A++ + ++G ++ +L PN Y L+ ++ + RS
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN 823
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G PD+ T +L +C ++ +L + R + T++ +S C G +
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 504 YLMRGDLDKVTARFSYA-------KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRH 556
+ DL KV + M+ +++R + +L EM ++G + Y
Sbjct: 884 F----DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 557 VLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAM-HANKPDLAREVFELMQRNG 615
+++ L + + +T F EM+ H ++ S + A+ K D A + M +
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST---KL----YNRMIVGLCKSD 668
++ +S +M ++ + +AL +VV+S KL YN +I GLC
Sbjct: 1000 LVPTIASFTTLMHLCCKNGNVIEALEL------RVVMSNCGLKLDLVSYNVLITGLCAKG 1053
Query: 669 KADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
+A EL EM G + Y+ L++ L + + + +++
Sbjct: 1054 DMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 200/527 (37%), Gaps = 42/527 (7%)
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P +NILI L E + L+ M ++ P +VT N VL ++CK G A+EL
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
+ G+ + Y LI LC + Y +LR P+ T++TL N
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG----YLMRGDLDKVTARF 517
E K+ LL+ L PN T++ + G ++ Y+M +
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK-GLTPSEV 409
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEM 577
SY ++ G K+ D+A + MK G + R +Y ++ L L EM
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 578 MTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
G P +++ I+G + A+E+ + R G+ N ++ + R +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 637 SDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+A+R + + + +N ++ LCK+ K A E M G+ P+ ++ L
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589
Query: 696 VQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEF 755
+ + +A ++ + K G T F LL + RE E +F
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL--------REAE-KF 640
Query: 756 LDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACEL 814
L S L A VD YN L+ + ++ KA L
Sbjct: 641 LKS-------------------------LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Query: 815 FDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPP 861
F M QR + P+ +TY + G G+ A + E +G P
Sbjct: 676 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 214/500 (42%), Gaps = 15/500 (3%)
Query: 209 YHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLV 267
++ LL+++A+ N + + Q+ G + T I I C++ +L A A L ++
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 268 GSGKELHRSELSFLIGVLCESNRFERAVELVS---EFGTSLPLENAYGVWIRGLVQGGRL 324
G E LS L+ C S R AV LV E G P + I GL +
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK-PDTFTFTTLIHGLFLHNKA 204
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
EA+ Q G P V Y ++ L + + LL M + I ++V N
Sbjct: 205 SEAVALVDQMV-QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ CK +D AL LF G+ P+ Y LI LC G +A R+L
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG- 503
P+ TFS L +A +E K+ E L D ++R P+ TYS ++ C R+++
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 504 --YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+ + D +Y+ +I GF K+ R + L EM ++G +Y ++H
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 562 LHM---DNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT 618
DN + F ++ + H P+ +N +DG K A VFE +QR+ +
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVH--PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 619 NASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELC 677
+ + ++++ ++ ++ D F ++ + V + YN MI G C+ + A L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 678 FEMLKVGLNPSIECYEVLVQ 697
+M + G P+ Y L++
Sbjct: 562 KKMKEDGPLPNSGTYNTLIR 581
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/544 (21%), Positives = 227/544 (41%), Gaps = 41/544 (7%)
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
IL RL ++ D +L DM ++ P++V N +L K+ ++ + L
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
G+S + Y I C A VL GY PD T S+L N C +I +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKM 522
L+D +E + P++ T++ + L + + + +D++ R +Y +
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL---VDQMVQRGCQPDLVTYGTV 229
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL---HMDNPRTRFFNLLEMMT 579
+ G K D+A LL +M++ E Y ++ L HMD+ F EM
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF---TEMDN 286
Query: 580 HG-KPHCDIFNSFIDGAMHANK-PDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G +P ++S I + + D +R + ++++R I N + ++ ++ + ++
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLV 345
Query: 638 DALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
+A + +++ I+ + Y+ +I G C D+ D A + M+ P++ Y L+
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFL 756
+ C KR E + L + G +GN + + ++I H R + +
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRG-----LVGNTVTYTTLI-----HGFFQARDCDNAQMV 455
Query: 757 DSSMLT-----------LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH 805
M++ +++ +++ ++ E L DIYTYN+++ +
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 806 H-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
++ ELF + +G+ PN Y M GF G K+EA + +M + G P T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 865 RNVI 868
N +
Sbjct: 576 YNTL 579
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 20/295 (6%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN----CYNAFDVIANQ 231
L+ + GK A L M + +D D F Y L+N ++ + F+++ ++
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 232 ICMRGYESHMTNVIVIKHLCKQGRLEEA-----EAHLNGLVGSGKELHRSELSFLIGVLC 286
C + + +T +IK CK R+EE E GLVG+ F C
Sbjct: 393 DC---FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 287 ESNR--FERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
++ + F++ V + P Y + + GL + G+L +A+ F + S P
Sbjct: 450 DNAQMVFKQMVSVGVH-----PNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDI 503
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
YNI+I + + +++D +EL +++ + PN++ N ++ FC+ G + A L
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ G PN Y LI DG + + +++ G+ D T + N L
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 247/580 (42%), Gaps = 45/580 (7%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS-LPLE-NAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
+IGV NR + A+ L + +PL ++ + I+ +L +L F K
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF-GKLTKL 170
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
GF P V +N L+ L E+R+ + L M ET G ++ A
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET-------------------GFLE-A 210
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ LF+ + GL+P + + LI LC +G EA ++ G G D T+ T+ N
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG-YLMRGDLDKVTAR- 516
+C+ +LL E P+ YS + LC+ G D YL L+K A
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 517 -FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF--- 572
F+Y MI GF R A RLL +M E+ ++ + L+ + F
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF----NALISASVKEGKLFEAE 386
Query: 573 NLLEMMTHGK--PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
L + M H P +NS I G N+ D A+ +F+LM ++T + ++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT----IIDVY 442
Query: 631 FRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
R++R+ + ++ +I R +V +T YN +I G C+ D + A +L EM+ G+ P
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDL-- 747
+L+ C ++ EA+ L V + + L + N+++ H M DL
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII-HGMCKGSKVDEAWDLFC 561
Query: 748 RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK-LTHH 806
G D ++I F G +S + ++ D TYN L+R L
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 807 DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
++DK+ EL M G + +T ++A ++ GR D++
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMVADLITD-GRLDKS 660
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 144/631 (22%), Positives = 262/631 (41%), Gaps = 96/631 (15%)
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVI 245
+PD+A+ L +M + + L+ + ++IL+ + + + ++ G++ +
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 246 VIKH-LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
+ H LC + R+ EA A +V +G FL V F++ VE+ G +
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETG---------FLEAVAL----FDQMVEI----GLT 223
Query: 305 LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVY 364
P+ + I GL GR+ EA K +G V Y ++ + + K
Sbjct: 224 -PVVITFNTLINGLCLEGRVLEAAALV-NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
LL M ET I P++V +A++ CK G A LF+ + G++PN Y +I
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
C G +A R+LR PD TF+ L +A +E K+ E L D L R P++
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 485 STYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKE 544
TY+ + C+ R +D M DL ++ +I + ++ R D +LL E+
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMF-DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLA 604
+G ++Y ++H +DN A
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNA----------------------------------A 486
Query: 605 REVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR-HQVVVSTKLYNRMIVG 663
+++F+ M +G+ + + +++ + + ++ +AL F I+ ++ + T YN +I G
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHG 546
Query: 664 LCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLT 723
+CK K D A +L + G+ P ++ Y V++ C A++ NV
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG----KSAISDANV--------- 593
Query: 724 SFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLR---VSYSIQE 780
LFH M + G D+S +I GCL+ + SI+
Sbjct: 594 -------LFHKM--------------KDNGHEPDNSTYNTLI---RGCLKAGEIDKSIEL 629
Query: 781 LEELIAKCFPVDIYTYNLLMRKLTHHDMDKA 811
+ E+ + F D +T ++ +T +DK+
Sbjct: 630 ISEMRSNGFSGDAFTIKMVADLITDGRLDKS 660
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 119/567 (20%), Positives = 224/567 (39%), Gaps = 62/567 (10%)
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
LD+A++FF S F V N +IG +R NR L M IP N+ + N
Sbjct: 87 LDDAIDFFDYMVRSRPFYT-AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
++ FC + +L F ++ G P+ + + L+ LC + EA + T
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 444 GYF---------------PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
G+ P TF+TL N LC E ++ E L++ + + + TY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEK 545
V+ +C+ G + + +++ + Y+ +I K A L EM EK
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 546 GYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAR 605
G P+ +N IDG + A+
Sbjct: 326 GI----------------------------------APNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVV-STKLYNRMIVGL 664
+ M I + + ++ + + ++ +A + +++ H+ + T YN MI G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
CK ++ D A + F+++ +P + + ++ C KR E + L+ + G +
Sbjct: 412 CKHNRFDDAKHM-FDLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 725 FLGNVLLFHSMISPEVYHSCVDLRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELE 782
N L+ H + ++ DL +E G D+ +++ F ++ +++ E
Sbjct: 468 TTYNTLI-HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 783 ELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHG 841
+ +D YN+++ + +D+A +LF + G+EP+ TY +M GF
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 842 RKDEAKRWVHEMLKKGFNPPENTRNVI 868
+A H+M G P +T N +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 201/506 (39%), Gaps = 82/506 (16%)
Query: 133 YHTRTTF---VAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDI 189
Y T F VA+F + L P+V F +TL+ G + G+
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITF----------------NTLINGLCLEGRVLE 244
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICMRGYESHMTNVIV-- 246
A L+ +M +GL +D Y ++N + + + +A ++++ + E+H+ +V
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS-----KMEETHIKPDVVIY 299
Query: 247 ---IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT 303
I LCK G H S+ +L S E+ +
Sbjct: 300 SAIIDRLCKDG-------------------HHSDAQYLF-----SEMLEKGIA------- 328
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P Y I G GR +A R + E P + +N LI ++E +L +
Sbjct: 329 --PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEA 385
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L +M CI P+ VT N+++ FCK D A +F+ + SP+ + + +I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
C E ++LR S G + T++TL + C ++ DL + P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 484 SSTYSRFVSALCRAGRVEDG-------YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAA 536
+ T + + C ++E+ + + DLD V +Y +I G K ++ D A
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV----AYNIIIHGMCKGSKVDEAW 557
Query: 537 RLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDG 594
L + G E +Y ++ C + F+ ++ H +P +N+ I G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRG 616
Query: 595 AMHANKPDLAREVFELMQRNGIMTNA 620
+ A + D + E+ M+ NG +A
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 158/377 (41%), Gaps = 69/377 (18%)
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
R + ++I G + + +G + L ++ +G ELK S H L + FF
Sbjct: 42 VRLNSRRLIHGRV-AEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSL----DDAIDFF-- 94
Query: 575 LEMMTHGKPHCDIF--NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
+ M +P N I + N+PD+A ++ M+ I N S +++K +
Sbjct: 95 -DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153
Query: 633 SRRISDALRFFNDIRH---QVVVSTKLYNRMIVGLCKSDKADIALELCF----------- 678
++S +L F + Q V T +N ++ GLC D+ AL L
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVT--FNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 679 ----EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHS 734
+M+++GL P + + L+ LC R EA LVN G + +V+ + +
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-----DVVTYGT 266
Query: 735 MISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIY 794
+++ K G+ S L L+ ++EE K D+
Sbjct: 267 IVNGMC----------KMGD--TKSALNLL--------------SKMEETHIK---PDVV 297
Query: 795 TYNLLMRKLT---HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
Y+ ++ +L HH A LF M ++G+ PN +TY M GF + GR +A+R +
Sbjct: 298 IYSAIIDRLCKDGHHS--DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 852 EMLKKGFNPPENTRNVI 868
+M+++ NP T N +
Sbjct: 356 DMIEREINPDVLTFNAL 372
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 136 bits (342), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 161/653 (24%), Positives = 284/653 (43%), Gaps = 64/653 (9%)
Query: 238 ESH---MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL---CESNRF 291
ESH + I + + ++ E L+ L+ S + +++LS L+ V+ +SN
Sbjct: 33 ESHGISLDATPTIARILVRAKMHEEIQELHNLILS-SSIQKTKLSSLLSVVSIFAKSNHI 91
Query: 292 ERAV---ELV-SEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRY 347
++A +LV S F + P Y + + ++ R+ E + + + G P +
Sbjct: 92 DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRV-EFVSWLYKDMVLCGIAPQTYTF 150
Query: 348 NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ 407
N+LI L + + EL +M E PN T ++ +CK G+ D LEL N+
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI-D 466
FG+ PN + Y ++ + C +G ++ +++ G PD TF++ +ALC+E K+ D
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 467 EMWDLLDFALERRF---MPNSSTYSRFVSALCRAGRVEDGYLMRGDL---DKVTARFSYA 520
D L+ PNS TY+ + C+ G +ED + + D + + SY
Sbjct: 271 ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMM 578
+ G ++ + A +L +M +KG SY ++ C L M + L M
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL--MK 388
Query: 579 THGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
+G P + + G K D A+ + + M RN + NA + +++ S ++ RIS
Sbjct: 389 RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 638 DA---LRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEM-------------L 681
+A LR N+ + + T N ++ GLC S + D A+E+ M
Sbjct: 449 EAEELLRKMNEKGYG--LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 682 KVGLN----------PSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLT--SFLGNV 729
+GL P + Y L+ LC R+ EA NL E G +L S N+
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL--FAEMMGEKLQPDSVAYNI 564
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT---LIIGAFSGCLRVSYSIQEL-EELI 785
+ H ++ S + ++ E + S+ T LI+G G + I L +E+
Sbjct: 565 FIHHFCKQGKI-SSAFRVLKDMEKKGCHKSLETYNSLILGL--GIKNQIFEIHGLMDEMK 621
Query: 786 AKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGF 837
K +I TYN ++ L + ++ A L D M Q+ + PN +++ + F
Sbjct: 622 EKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 209/537 (38%), Gaps = 56/537 (10%)
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P YN+L+ ++E R++ V L DM I P T N ++ C VD A EL
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
F+ + G PN + L+ C G + +L + G P++ ++T+ ++ CR
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD-------KVT 514
E + D+ +++ E +P+ T++ +SALC+ G+V D + D++
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+Y M+ GF K + A L ++E SY L L+ L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 575 LEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
+M G P +N +DG A+ + LM+RNG+ +A +
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT----------- 398
Query: 634 RRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
Y ++ G C K D A L EM++ P+
Sbjct: 399 -----------------------YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEG 753
+L+ L + R EA L+ + G L + N++ V C +K
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII---------VDGLCGSGELDKAI 486
Query: 754 EFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK-CFPVDIYTYNLLMRKLTHHD-MDKA 811
E + + + A G L SY + LI C P D+ TY+ L+ L +A
Sbjct: 487 EIVKG--MRVHGSAALGNLGNSYIGLVDDSLIENNCLP-DLITYSTLLNGLCKAGRFAEA 543
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
LF M L+P+ Y + H F G+ A R + +M KKG + T N +
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 137/628 (21%), Positives = 246/628 (39%), Gaps = 62/628 (9%)
Query: 279 SFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
+ LI LC+S+ + A EL E P E +G+ +RG + G D+ LE +
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELL-NAME 209
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
S G +P KV YN ++ RE R D +++ M E + P++VT N+ + CK G V
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 397 VALELFNS---RSQFGLS-PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTF 452
A +F+ GL PN + Y ++ C G ++A + S +++
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
+ L R K E +L ++ P+ +Y+ + LC+ G + D + G + +
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 513 ---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
+Y ++ G+ + D A LL EM + +LH L M +
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI-S 448
Query: 570 RFFNLLEMMTHGKPHCDIF--NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVM 627
LL M D N +DG + + D A E+ + M+ +G +++ +
Sbjct: 449 EAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG----SAALGNLG 504
Query: 628 KSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
SY + D+L I + + Y+ ++ GLCK+ + A L EM+ L P
Sbjct: 505 NSYIG--LVDDSL-----IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVY--HSCV 745
Y + + C + A ++ EK G + N L+ I +++ H +
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLM 617
Query: 746 DLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR---K 802
D +EK G + I +V + L+E++ K +++++ L+ K
Sbjct: 618 DEMKEK-GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 803 LTHHDMD--------------------------------KACELFDRMCQRGLEPNRWTY 830
+ DM KA EL + + RG E + Y
Sbjct: 677 VPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLY 736
Query: 831 GLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ + A +H+M+ +G+
Sbjct: 737 KDLVESLCKKDELEVASGILHKMIDRGY 764
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 125/590 (21%), Positives = 229/590 (38%), Gaps = 112/590 (18%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFD 226
P++ Y +T+V + G+ D + ++ +MR +GL D ++ +++L +
Sbjct: 214 LPNKVIY-NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 227 VIANQICMRGY-----ESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL 281
I + + + Y + +T +++K CK G LE+A+
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT-------------------- 312
Query: 282 IGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFV 341
FE E L +Y +W++GLV+ G+ EA +Q D +G
Sbjct: 313 --------LFESIRE-----NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD-KGIG 358
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P YNIL+ L + L D ++ M + P+ VT +L +C +G VD A L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
+ PN L+ +L G EA +LR + GY D T + + + LC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 462 ECKIDEMWDLL-----------------------DFALERRFMPNSSTYSRFVSALCRAG 498
++D+ +++ D +E +P+ TYS ++ LC+AG
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 499 RVEDGYLMRGDL----------------------DKVTARF----------------SYA 520
R + + ++ K+++ F +Y
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH 580
+I+G N+ L+ EMKEKG +Y + L + L EMM
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 581 G-KPHCDIFNSFIDGAMHANKPDLAREVFELM-----QRNGIMTNASSQILVMKSYFRSR 634
P+ F I+ D+A+EVFE Q+ G+ + +++L ++
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKAT 718
Query: 635 RISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
+ +A+ + + T LY ++ LCK D+ ++A + +M+ G
Sbjct: 719 ELLEAV-----LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 198/524 (37%), Gaps = 79/524 (15%)
Query: 384 AVLCFFCKLGMVDVALELFN-SRSQFGLSPNYMAYKYLILTLCWDGCPKE-----AYRVL 437
+V+ F K +D A F RS+F P YL L + C KE +
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRF---PENKPSVYL-YNLLLESCIKERRVEFVSWLY 135
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
+ G P TF+ L ALC +D +L D E+ PN T+ V C+A
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 498 GRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSY 554
G + G + ++ + + Y ++ F + R D + +++ +M+E+G
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL------- 248
Query: 555 RHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRN 614
P FNS I K A +F M+ +
Sbjct: 249 ---------------------------VPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 615 GIM----TNASSQILVMKSYFRSRRISDALRFFNDIR-HQVVVSTKLYNRMIVGLCKSDK 669
+ N+ + L++K + + + DA F IR + + S + YN + GL + K
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
A + +M G+ PSI Y +L+ LC L +A +V + ++ G +
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGC 401
Query: 730 LLFHSMISPEVYHSCVDLRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK 787
LL H S + L +E + ++ +++ + R+S + + L ++ K
Sbjct: 402 LL-HGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 788 CFPVDIYTYNLLMRKL-THHDMDKACELF-----------------------DRMCQRGL 823
+ +D T N+++ L ++DKA E+ D + +
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 824 EPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNV 867
P+ TY + +G GR EAK EM+ + P N+
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNI 564
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 166/435 (38%), Gaps = 53/435 (12%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++ L+ G G A ++G M+ G+ D Y LL+ +A + ++
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM- 422
Query: 234 MRG--YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
MR + T I++ L K GR+ EAE L + G L + ++ LC S
Sbjct: 423 MRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 292 ERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEA-LEFFRQKRDSEGFVPCKVRYNIL 350
++A+E+V G+ + G G L + + +P + Y+ L
Sbjct: 483 DKAIEIVK------------GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTL 530
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ L + R + L +M + P+ V N + FCK G + A + + G
Sbjct: 531 LNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC 590
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
+ Y LIL L E + ++ G P+ T++T LC K+++ +
Sbjct: 591 HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRA-----------------GRVEDGY-------LM 506
LLD +++ PN ++ + A C+ G+ E Y L
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA 710
Query: 507 RGDLDKVT-------------ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
G L K T F Y ++ K + ++A+ +L +M ++GY ++
Sbjct: 711 AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAA 770
Query: 554 YRHVLHCLLHMDNPR 568
V+ L M N +
Sbjct: 771 LMPVIDGLGKMGNKK 785
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 127/308 (41%), Gaps = 32/308 (10%)
Query: 563 HMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
H+D +F + KP ++N ++ + + + +++ M GI +
Sbjct: 90 HIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYT 149
Query: 623 QILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEML 681
L++++ S + A F+++ + + + ++ G CK+ D LEL M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 682 KVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVY 741
G+ P+ Y +V C R ++ +V + G + +++ F+S IS
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG-----LVPDIVTFNSRISALC- 263
Query: 742 HSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR 801
KEG+ LD+S + +S EL+E + P I TYNL+++
Sbjct: 264 ---------KEGKVLDASRI--------------FSDMELDEYLGLPRPNSI-TYNLMLK 299
Query: 802 KLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ + A LF+ + + + +Y + G HG+ EA+ + +M KG P
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 861 PENTRNVI 868
+ N++
Sbjct: 360 SIYSYNIL 367
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 229/537 (42%), Gaps = 23/537 (4%)
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVI 245
+PD+A+ L +M + + L+ + ++IL+ + + + ++ G++ +
Sbjct: 121 RPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 246 VIKH-LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
+ H LC + R+ EA A +V +G FL V F++ VE+ G +
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETG---------FLEAVAL----FDQMVEI----GLT 223
Query: 305 LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVY 364
P+ + I GL GR+ EA K +G V Y ++ + + K
Sbjct: 224 -PVVITFNTLINGLCLEGRVLEAAALV-NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
LL M ET I P++V +A++ CK G A LF+ + G++PN Y +I
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
C G +A R+LR PD TF+ L +A +E K+ E L D L R P++
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 485 STYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKE 544
TY+ + C+ R +D M DL ++ +I + ++ R D +LL E+
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMF-DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDL 603
+G ++Y ++H +DN EM++HG P N + G K +
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR-HQVVVSTKLYNRMIV 662
A E+FE++Q + I + + +++ + ++ +A F + H V + YN MI
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
G C A L +M G P Y L++ +++ L++ G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 244/591 (41%), Gaps = 75/591 (12%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS-LPLE-NAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
+IGV NR + A+ L + +PL ++ + I+ +L +L F K
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF-GKLTKL 170
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
GF P V +N L+ L E+R+ + L M ET G ++ A
Sbjct: 171 GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET-------------------GFLE-A 210
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ LF+ + GL+P + + LI LC +G EA ++ G G D T+ T+ N
Sbjct: 211 VALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 270
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG-YLMRGDLDKVTAR- 516
+C+ +LL E P+ YS + LC+ G D YL L+K A
Sbjct: 271 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 330
Query: 517 -FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF--- 572
F+Y MI GF R A RLL +M E+ ++ + L+ + F
Sbjct: 331 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF----NALISASVKEGKLFEAE 386
Query: 573 NLLEMMTHGK--PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
L + M H P +NS I G N+ D A+ +F+LM ++T + ++ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT----IIDVY 442
Query: 631 FRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
R++R+ + ++ +I R +V +T YN +I G C+ D + A +L EM+ G+ P
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR 749
+L+ C ++ EA+ L V + + L + N+++ H M +
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII-HGM-----------CKG 550
Query: 750 EKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-M 808
K E D L S I +E D+ TYN+++ +
Sbjct: 551 SKVDEAWD--------------LFCSLPIHGVEP--------DVQTYNVMISGFCGKSAI 588
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFN 859
A LF +M G EP+ TY + G G D++ + EM GF+
Sbjct: 589 SDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 119/567 (20%), Positives = 224/567 (39%), Gaps = 62/567 (10%)
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
LD+A++FF S F V N +IG +R NR L M IP N+ + N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTA-VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
++ FC + +L F ++ G P+ + + L+ LC + EA + T
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 444 GYF---------------PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
G+ P TF+TL N LC E ++ E L++ + + + TY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEK 545
V+ +C+ G + + +++ + Y+ +I K A L EM EK
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 546 GYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAR 605
G P+ +N IDG + A+
Sbjct: 326 GI----------------------------------APNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVV-STKLYNRMIVGL 664
+ M I + + ++ + + ++ +A + +++ H+ + T YN MI G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
CK ++ D A + F+++ +P + + ++ C KR E + L+ + G +
Sbjct: 412 CKHNRFDDAKHM-FDLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 725 FLGNVLLFHSMISPEVYHSCVDLRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELE 782
N L+ H + ++ DL +E G D+ +++ F ++ +++ E
Sbjct: 468 TTYNTLI-HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 783 ELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHG 841
+ +D YN+++ + +D+A +LF + G+EP+ TY +M GF
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 842 RKDEAKRWVHEMLKKGFNPPENTRNVI 868
+A H+M G P +T N +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 121/552 (21%), Positives = 219/552 (39%), Gaps = 85/552 (15%)
Query: 133 YHTRTTF---VAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDI 189
Y T F VA+F + L P+V F +TL+ G + G+
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITF----------------NTLINGLCLEGRVLE 244
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICMRGYESHMTNVIV-- 246
A L+ +M +GL +D Y ++N + + + +A ++++ + E+H+ +V
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS-----KMEETHIKPDVVIY 299
Query: 247 ---IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT 303
I LCK G H S+ +L S E+ +
Sbjct: 300 SAIIDRLCKDG-------------------HHSDAQYLF-----SEMLEKGIA------- 328
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P Y I G GR +A R + E P + +N LI ++E +L +
Sbjct: 329 --PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEA 385
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L +M CI P+ VT N+++ FCK D A +F+ + SP+ + + +I
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDV 441
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
C E ++LR S G + T++TL + C ++ DL + P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 484 SSTYSRFVSALCRAGRVEDG-------YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAA 536
+ T + + C ++E+ + + DLD V +Y +I G K ++ D A
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV----AYNIIIHGMCKGSKVDEAW 557
Query: 537 RLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDG 594
L + G E +Y ++ C + F+ ++ H +P +N+ I G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRG 616
Query: 595 AMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST 654
+ A + D + E+ M+ NG +A + + + R+SD N +R ++ T
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC---RVSDEEIIENYLRPKINGET 673
Query: 655 KLYNRMIVGLCK 666
R +V L +
Sbjct: 674 SSIPRYVVELAE 685
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 158/377 (41%), Gaps = 69/377 (18%)
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
R + ++I G + + +G + L ++ +G ELK S H L + FF
Sbjct: 42 VRLNSRRLIHGRV-AEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSL----DDAIDFF-- 94
Query: 575 LEMMTHGKPHCDIF--NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
+ M +P N I + N+PD+A ++ M+ I N S +++K +
Sbjct: 95 -DYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCD 153
Query: 633 SRRISDALRFFNDIRH---QVVVSTKLYNRMIVGLCKSDKADIALELCF----------- 678
++S +L F + Q V T +N ++ GLC D+ AL L
Sbjct: 154 CHKLSFSLSTFGKLTKLGFQPDVVT--FNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 679 ----EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHS 734
+M+++GL P + + L+ LC R EA LVN G + +V+ + +
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI-----DVVTYGT 266
Query: 735 MISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIY 794
+++ K G+ S L L+ ++EE K D+
Sbjct: 267 IVNGMC----------KMGD--TKSALNLL--------------SKMEETHIK---PDVV 297
Query: 795 TYNLLMRKLT---HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
Y+ ++ +L HH A LF M ++G+ PN +TY M GF + GR +A+R +
Sbjct: 298 IYSAIIDRLCKDGHHS--DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 852 EMLKKGFNPPENTRNVI 868
+M+++ NP T N +
Sbjct: 356 DMIEREINPDVLTFNAL 372
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 141/654 (21%), Positives = 261/654 (39%), Gaps = 88/654 (13%)
Query: 224 AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIG 283
+++ +C+R S +++ L K+G++EEA + +V G + + LI
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 284 VLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFV 341
LC+ +F A L G P + Y + I + G+LD AL F + D+ G
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT-GLK 434
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
YN LI + + + +M + P +VT +++ +C G ++ AL L
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
++ + G++P+ + L+ L G ++A ++ + P+R T++ + C
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS--- 518
E + + ++ L E+ +P++ +Y + LC G+ + + L K +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH-CLLHMDNPRTRFFNLL-E 576
Y ++ GF + + + A + EM ++G +L Y ++ L H D R FF LL E
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD--RKLFFGLLKE 672
Query: 577 MMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRR 635
M G KP I+ S ID A +++LM G + N +
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT------------- 719
Query: 636 ISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECY--- 692
Y +I GLCK+ + A LC +M V P+ Y
Sbjct: 720 ---------------------YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 693 -EVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREK 751
++L + +++ E N + L L N ++
Sbjct: 759 LDILTKGEVDMQKAVELHNAI---------LKGLLANTATYN------------------ 791
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDK 810
++I F R+ + + + +I D TY ++ +L +D+ K
Sbjct: 792 -----------MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 811 ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
A EL++ M ++G+ P+R Y + HG G +A +EML++G P T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 237/566 (41%), Gaps = 58/566 (10%)
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
V YN+LI L ++ ++ + + D+ + P++VT ++ CK+ ++ LE+ +
Sbjct: 263 VPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
SP+ A L+ L G +EA +++ G P+ ++ L ++LC+ K
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS---YAK 521
E L D + PN TYS + CR G+++ G++ + S Y
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 522 MIMGFIKSNRGDIAAR--LLVEMKEKGYELKRSSYRHVL--HCLLHMDNPRTRFFNLLEM 577
+I G K GDI+A + EM K E +Y ++ +C N R ++ EM
Sbjct: 443 LINGHCKF--GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH--EM 498
Query: 578 MTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
G P F + + G A A ++F M + N + ++++ Y +
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 637 SDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
S A F ++ + +V T Y +I GLC + +A A + K + CY L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 696 VQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM-------------------I 736
+ C + EA+++ + G L VL+ S+ +
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 737 SPE--VYHSCVDLRREKEGEFLDS-SMLTLIIGAFSGCL--RVSYS-----------IQE 780
P+ +Y S +D + K G+F ++ + L+I GC+ V+Y+ + E
Sbjct: 679 KPDDVIYTSMID-AKSKTGDFKEAFGIWDLMIN--EGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 781 LEELIAKCFPV----DIYTYNLLMRKLTHH--DMDKACELFDRMCQRGLEPNRWTYGLMA 834
E L +K PV + TY + LT DM KA EL + + +GL N TY ++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLI 794
Query: 835 HGFSNHGRKDEAKRWVHEMLKKGFNP 860
GF GR +EA + M+ G +P
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSP 820
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 208/553 (37%), Gaps = 64/553 (11%)
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
EL DM I P++ V+ C+L + A E+ G N + Y LI L
Sbjct: 213 ELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC------------------------ 460
C EA + + +G PD T+ TL LC
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 461 -----------RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
+ KI+E +L+ ++ PN Y+ + +LC+ + + L+
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 510 LDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL--HCLLHM 564
+ K+ R +Y+ +I F + + D A L EM + G +L Y ++ HC
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 565 DNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQ 623
+ F + EM+ +P + S + G K + A ++ M GI + +
Sbjct: 453 ISAAEGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 624 ILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLK 682
++ FR+ I DA++ FN++ V ++ YN MI G C+ A E EM +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 683 VGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM------- 735
G+ P Y L+ LC + EA V+ K L LL H
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL-HGFCREGKLE 629
Query: 736 ----ISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPV 791
+ E+ VDL G +D S+ F G L+ E+ + K P
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK------EMHDRGLK--PD 681
Query: 792 DIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
D+ +++ K D +A ++D M G PN TY + +G G +EA+
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 852 EMLKKGFNPPENT 864
+M P + T
Sbjct: 742 KMQPVSSVPNQVT 754
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 210/516 (40%), Gaps = 52/516 (10%)
Query: 185 GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICMRGYESHMTN 243
GK D AL LG M GL L + Y+ L+N + + A +A I + + +T
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFG- 302
++ C +G++ +A + + G G + L+ L + AV+L +E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 303 -TSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
P Y V I G + G + +A EF ++ + +G VP Y LI L +
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE-KGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
+ + +++ N + +L FC+ G ++ AL + Q G+ + + Y LI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 422 LTLCWDGCPKEAYR-----VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFAL 476
DG K R +L+ G PD ++++ +A + E + + D +
Sbjct: 655 -----DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 477 ERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGFIKSNRGD 533
+PN TY+ ++ LC+AG V + ++ + V++ + +Y + D
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL---------D 760
Query: 534 IAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFID 593
I + V+M +K EL + + +L + +N I
Sbjct: 761 ILTKGEVDM-QKAVELHNAILKGLL------------------------ANTATYNMLIR 795
Query: 594 GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVS 653
G + + A E+ M +G+ + + ++ R + A+ +N + + +
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 654 TKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
++ YN +I G C + + A EL EML+ GL P+
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 161/403 (39%), Gaps = 40/403 (9%)
Query: 127 GRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCS----FPHRARYHDTLVVGYA 182
G P Y T +FR L+ D ++ F + P+R Y + ++ GY
Sbjct: 502 GIAPSIYTFTTLLSGLFR-------AGLIRDAVKLFNEMAEWNVKPNRVTY-NVMIEGYC 553
Query: 183 IAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIA----------NQI 232
G A L M +G+ D + Y L++ L + V N+I
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLI-GVLCESNR- 290
C G ++ C++G+LEEA + +V G +L LI G L +R
Sbjct: 614 CYTG---------LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 291 -FERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
F ++ + + G P + Y I + G EA + + EG VP +V Y
Sbjct: 665 LFFGLLKEMHDRGLK-PDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN-EGCVPNEVTYTA 722
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV--ALELFNSRSQ 407
+I L + + + L M PN VT L K G VD+ A+EL N+ +
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILK 781
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
GL N Y LI C G +EA ++ G G PD T++T+ N LCR + +
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 468 MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
+L + E+ P+ Y+ + C AG + +R ++
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 6/282 (2%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG 236
L+ G+ GK + AL + M +G+DLD Y +L++ ++ F + ++ RG
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 237 YE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAV 295
+ + +I K G +EA + ++ G + + +I LC++ A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 296 ELVSEFG--TSLPLENAYGVWIRGLVQGG-RLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
L S+ +S+P + YG ++ L +G + +A+E +G + YN+LI
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL--HNAILKGLLANTATYNMLIR 795
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
R+ R+++ EL+ M + P+ +T ++ C+ V A+EL+NS ++ G+ P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
+ +AY LI C G +A + G P+ +T T
Sbjct: 856 DRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 142/587 (24%), Positives = 255/587 (43%), Gaps = 46/587 (7%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFF-RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVY 364
P + YG I+ V+ + + LE F R K D P YN+LI L + R+ D
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR--IYPSVFIYNVLIDGLCKGKRMNDAE 234
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
+L +M + P+++T N ++ +CK G + + ++ + P+ + + L+ L
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGL 294
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
G ++A VL+ G+ PD TFS L + K + + + A++ N+
Sbjct: 295 FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNA 354
Query: 485 STYSRFVSALCRAGRVEDGYLMRG-DLDK--VTARFSYAKMIMGFIKSNRGD-IAARLLV 540
T S ++ALC+ G++E + G ++ K V Y MI G+ + +GD + AR+ +
Sbjct: 355 YTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR--KGDLVGARMKI 412
Query: 541 E-MKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-----------PHCDIF 588
E M+++G + +Y +CL+ RF L EM K P + +
Sbjct: 413 EAMEKQGMKPDHLAY----NCLIR------RFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 589 NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH 648
N I G + D ++ + M+ NG M N S ++ + ++ +A D+
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 649 Q-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYE 707
+ V ++YN +I G C K + A EMLK G+ ++ Y L+ L + E
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 708 AVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGA 767
A +L+ + G + F N L+ + V C+ L E + + ++ T
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV-QRCIALYEEMKRSGIKPTLKTY---- 637
Query: 768 FSGCLRVSYSIQELEELIAKCF-----PVDIYTYNLLMR-KLTHHDMDKACELFDRMCQR 821
L +S +E EL + F D+ YN ++ H DM+KA L +M ++
Sbjct: 638 ---HLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 822 GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ ++ TY + G G+ E + + EM + P +T N+I
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNII 741
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 137/645 (21%), Positives = 248/645 (38%), Gaps = 55/645 (8%)
Query: 161 DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN 220
DFR F + V + GK L L RM+ + F Y++L++ L +
Sbjct: 174 DFRPSKFMYGKAIQ--AAVKLSDVGK---GLELFNRMKHDRIYPSVFIYNVLIDGLCKGK 228
Query: 221 CYNAFDVIANQICMRG-YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
N + + +++ R S +T +I CK G E++ + E +
Sbjct: 229 RMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFN 288
Query: 280 FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
L+ L ++ E A ++ E +P + + G + + AL + DS
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
G +IL+ L +E +++ E+L + PN V N ++ +C+ G +
Sbjct: 349 -GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A + + G+ P+++AY LI C G + A + + G P T++ L
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK--VTA 515
R+ + D+ +D+L + MPN +Y ++ LC+ ++ + +++ D++ V+
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 516 RFS-YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+ Y +I G + + A R EM +KG EL +Y ++ L L
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Query: 575 LEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN-----------ASS 622
LE+ G KP +NS I G A ++E M+R+GI
Sbjct: 588 LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE 647
Query: 623 QILVMKSYFRSRRISDALRFFNDIRH---------------------QVVVSTKLYNRMI 661
I + + F + L +N + H + + YN +I
Sbjct: 648 GIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
+G K K L EM + P + Y ++V+ C +K Y A ++ G
Sbjct: 708 LGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Query: 722 LTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIG 766
L +GN E+ + R KE E + S M ++G
Sbjct: 768 LDVCIGN----------ELVSGLKEEWRSKEAEIVISEMNGRMLG 802
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 133/635 (20%), Positives = 255/635 (40%), Gaps = 69/635 (10%)
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLP 306
++ L +Q R+E A L+ L+ S +S F EL S F S P
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRS-----------------DSTPFASPKELFSAFSLSSP 104
Query: 307 -LENAYGVWIRGLV--QGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
L++ + + ++ + + EA + F R+ EG P +L+ L++ + +
Sbjct: 105 SLKHDFSYLLLSVLLNESKMISEAADLFFALRN-EGIYPSSDSLTLLLDHLVKTKQFRVT 163
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+ +++ E+ P+ + KL V LELFN + P+ Y LI
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
LC +A ++ P T++TL + C+ ++ + + + P+
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 484 SSTYSRFVSALCRAGRVEDGYLM---RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLV 540
T++ + L +AG VED + DL V F+++ + G+ + + + A +
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 541 EMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHAN 599
+ G ++ + +L+ L L M G P+ I+N+ IDG +
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG--YCR 401
Query: 600 KPDL--AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKL 656
K DL AR E M++ G+ + + +++ + + +A + N ++ + V S +
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
YN +I G + + D ++ EM G P++ Y L+ LC + EA + E
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 717 KAGRRLTSFLGNVLLFHSMISPEV--YHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRV 774
G +SP+V Y+ +D K G R
Sbjct: 522 DRG----------------VSPKVRIYNMLIDGCCSK--------------GKIEDAFRF 551
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLT-HHDMDKACELFDRMCQRGLEPNRWTYGLM 833
S +E++ K +++ TYN L+ L+ + +A +L + ++GL+P+ +TY +
Sbjct: 552 S------KEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSL 605
Query: 834 AHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G+ G EM + G P T +++
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLL 640
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/549 (21%), Positives = 215/549 (39%), Gaps = 53/549 (9%)
Query: 138 TFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRM 197
TF + + L A + + L++ + F A L GY+ K + AL +
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 198 RFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLE 257
G+ ++ + ILLN+ LCK+G++E
Sbjct: 346 VDSGVKMNAYTCSILLNA----------------------------------LCKEGKIE 371
Query: 258 EAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA---VELVSEFGTSLPLENAYGVW 314
+AE L + G + + +I C A +E + + G P AY
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK-PDHLAYNCL 430
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
IR + G ++ A E K +G P YNILIG R+ +++L +M +
Sbjct: 431 IRRFCELGEMENA-EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
PN+V+ ++ CK + A + G+SP Y LI C G ++A+
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
R + G + T++TL + L K+ E DLL + P+ TY+ +S
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 495 CRAGRVEDGYLMRGDLDK--VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
AG V+ + ++ + + +++ ++ RL EM K L
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLL--- 666
Query: 553 SYRHVLHC-LLHMDNPRTRFFNLLEMMTHGKPHCD--IFNSFIDGAMHANKPDLAREVFE 609
Y VLHC +H D + FNL + M D +NS I G + K R + +
Sbjct: 667 VYNGVLHCYAVHGDMEKA--FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLID 724
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGL---C 665
M + A + +++K + + A ++ +++ + ++ + N ++ GL
Sbjct: 725 EMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEW 784
Query: 666 KSDKADIAL 674
+S +A+I +
Sbjct: 785 RSKEAEIVI 793
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/585 (22%), Positives = 230/585 (39%), Gaps = 76/585 (12%)
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
D+A++ F++ S P + ++ L + R + V +L M I N+ T++
Sbjct: 54 DDAVDLFQEMTRSRPR-PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ C+ + +A + G P+ + + LI LC +G EA ++ G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR----- 499
+ P T + L N LC K+ + L+D +E F PN TY + +C++G+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 500 --------------------VEDGYLMRGDLDKVTARFS-------------YAKMIMGF 526
+ DG G LD F+ Y +I GF
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGF 292
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHC 585
+ R D A+LL +M ++ ++ ++ C + R EM+ G P
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
+ S IDG N+ D A + +LM G N + +++ Y ++ I D L F
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 646 IR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR 704
+ VV T YN +I G C+ K ++A EL EM+ + P I Y++L+ LC
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 705 YYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLI 764
+A+ + EK+ L + N+++ H M + DL
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIII-HGMCNASKVDDAWDL----------------- 514
Query: 765 IGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGL 823
L K D+ TYN+++ L + +A LF +M + G
Sbjct: 515 ----------------FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 824 EPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
PN TY ++ G ++ + + E+ + GF+ +T ++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 125/565 (22%), Positives = 244/565 (43%), Gaps = 58/565 (10%)
Query: 140 VAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRF 199
V +F+ ++ +R RP + DF R F S R + +D + L L +M
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLF---SVVARTKQYD-------------LVLDLCKQMEL 100
Query: 200 QGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESH-MTNVIVIKHLCKQGRLEE 258
+G+ + + I++N + +I GYE +T +I LC +GR+ E
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 259 AEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIR 316
A ++ +V G + L+ L+ LC + + AV L+ + P E YG ++
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
+ + G+ A+E R+ + + + V+Y+I+I L ++ L + + L +M
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDA-VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
+++ ++ FC G D +L + ++P+ +A+ LI +G +EA +
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
+ G PD T+++L + C+E ++D+ +LD + + PN T++ ++ C+
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 497 AGRVEDGYLM--RGDLDKVTA-RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
A ++DG + + L V A +Y +I GF + + ++A L EM +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-------- 451
Query: 554 YRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
R R P + +DG +P+ A E+FE +++
Sbjct: 452 --------------RVR------------PDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 614 NGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADI 672
+ + + +++ + ++ DA F + + V K YN MI GLCK
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 673 ALELCFEMLKVGLNPSIECYEVLVQ 697
A L +M + G +P+ Y +L++
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIR 570
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 183/402 (45%), Gaps = 12/402 (2%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCY-NAFD 226
P+ Y L V +G+ +A+ LL +M + + LD Y I+++ L ++ NAF+
Sbjct: 210 PNEVTYGPVLKV-MCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 227 VIANQICMRGYESHMT-NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ N++ ++G+++ + +I+ C GR ++ L ++ S LI
Sbjct: 269 LF-NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 286 CESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVP 342
+ + A EL E G S P Y I G + +LD+A S+G P
Sbjct: 328 VKEGKLREAEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHMLDLMV-SKGCGP 385
Query: 343 CKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELF 402
+NILI + N + D EL M+ + + VT N ++ FC+LG ++VA ELF
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 403 NSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRE 462
+ P+ ++YK L+ LC +G P++A + + D ++ + + +C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 463 CKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSY 519
K+D+ WDL + P+ TY+ + LC+ G + + L+ +++ +Y
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565
Query: 520 AKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+I + +A+L+ E+K G+ + S+ + V+ L
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 130/583 (22%), Positives = 237/583 (40%), Gaps = 44/583 (7%)
Query: 315 IRGLVQG-----GRLDEAL------EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
+RGL+Q G L AL F D +G KV Y + + + + D
Sbjct: 1 MRGLIQTRLLETGTLRTALFLSCYGRVFSSVSDGKG----KVSYRERLRSGIVDIKEDDA 56
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L +M + P ++ + + + D+ L+L G++ N Y I+
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNL--YTLSIMI 114
Query: 424 LCWDGCPKE--AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
C C K A+ + GY PD TFSTL N LC E ++ E +L+D +E
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA------RFSYAKMIMGFIKSNRGDIA 535
P T + V+ LC G+V D L+ +D++ +Y ++ KS + +A
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLL---IDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLL-EMMTHG-KPHCDIFNSFID 593
LL +M+E+ +L Y ++ L D FNL EM G K I+ + I
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCK-DGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 594 GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVV 652
G +A + D ++ M + I + + ++ + + ++ +A + I+ +
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
T Y +I G CK ++ D A + M+ G P+I + +L+ C + + L
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 713 NVYEKAGRRLTSFLGNVL------LFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIG 766
G + N L L ++ E++ V R D +++
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP-----DIVSYKILLD 465
Query: 767 AFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEP 825
+++ E++ +DI YN+++ + + +D A +LF + +G++P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 826 NRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ TY +M G G EA +M + G +P T N++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 147/620 (23%), Positives = 251/620 (40%), Gaps = 58/620 (9%)
Query: 158 FLRDFRSCSFPHRA----RYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILL 213
++RDF + +R R +D K D A++L G M + LL
Sbjct: 38 WVRDFSGVRYDYRKISINRLNDL---------KLDDAVNLFGDMVKSRPFPSIVEFSKLL 88
Query: 214 NSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
+++A+ N ++ + Q+ G ++ T I+I C++ +L A A L ++ G E
Sbjct: 89 SAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYE 148
Query: 273 LHRSELSFLIGVLCESNRFERAVELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEALE 329
L+ L+ C NR AV LV E G P + I GL + R EA+
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ-PDSFTFNTLIHGLFRHNRASEAVA 207
Query: 330 FFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFF 389
+ +G P V Y I++ L + + LL M + I P +V N ++
Sbjct: 208 LV-DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 390 CKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDR 449
C V+ AL LF G+ PN + Y LI LC G +A R+L P+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG---YLM 506
TFS L +A +E K+ E L D ++R P+ TYS ++ C R+++ + +
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 507 RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
D +Y +I GF K+ R D L EM ++G +Y ++H
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIH------- 439
Query: 567 PRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
G A + D A+ VF+ M +G++ + + ++
Sbjct: 440 ---------------------------GFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 627 MKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
+ + ++ AL F + R ++ YN MI G+CK+ K + +L + G+
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 686 NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCV 745
P++ Y ++ C EA L ++ G S N L+ + + S
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 746 DLRREKEGEFL-DSSMLTLI 764
+R + F+ D+S + L+
Sbjct: 593 LIREMRSCRFVGDASTIGLV 612
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 235/543 (43%), Gaps = 29/543 (5%)
Query: 345 VRYN---ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
VRY+ I I RL + +L D L DM ++ P++V + +L K+ D+ + L
Sbjct: 45 VRYDYRKISINRL-NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISL 103
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
G+S N Y LI C A VL GY PD T ++L N C
Sbjct: 104 GEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCH 163
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR----- 516
+I + L+ +E + P+S T++ + L R R + + +D++ +
Sbjct: 164 GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL---VDRMVVKGCQPD 220
Query: 517 -FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLL 575
+Y ++ G K D+A LL +M++ E Y ++ L + N
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 576 EMMTHG-KPHCDIFNSFIDGAMHANK-PDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
EM G +P+ +NS I + + D +R + ++++R I N + ++ ++ +
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKE 339
Query: 634 RRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECY 692
++ +A + +++ I+ + Y+ +I G C D+ D A + M+ P++ Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 693 EVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI-----SPEVYHSCVDL 747
L++ C KR E + L + G +GN + + ++I + E ++ +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRG-----LVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 748 RRE-KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH 806
++ +G D ++++ +V ++ E L DIYTYN+++ +
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 807 -DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTR 865
++ +LF + +G++PN TY M GF G K+EA EM ++G P T
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 866 NVI 868
N +
Sbjct: 575 NTL 577
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/552 (23%), Positives = 228/552 (41%), Gaps = 17/552 (3%)
Query: 143 FRILSCARLRPLVFD-----FLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRM 197
+R +S RL L D F +S FP + L+ A K D+ + L +M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFS-KLLSAIAKMNKFDLVISLGEQM 107
Query: 198 RFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNV-IVIKHLCKQGRL 256
+ G+ + + Y IL+N + + + ++ GYE + + ++ C R+
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 257 EEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVW 314
+A + + +V G + + LI L NR AV LV P YG+
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+ GL + G +D AL + K + P V YN +I L + D L +M+
Sbjct: 228 VNGLCKRGDIDLALSLLK-KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
I PN+VT N+++ C G A L + + ++PN + + LI +G EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
++ PD T+S+L N C ++DE + + + + PN TY+ +
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 495 CRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
C+A RV++G + ++ + V +Y +I GF ++ D A + +M G
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFE 609
+Y +L L + T + E + K DI +N I+G A K + ++F
Sbjct: 467 MTYSILLDGLCNNGKVETALV-VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSD 668
+ G+ N + +M + R +A F +++ + + + YN +I +
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Query: 669 KADIALELCFEM 680
+ EL EM
Sbjct: 586 DKAASAELIREM 597
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 16/293 (5%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN----CYNAFDVIANQ 231
L+ + GK A L M + +D D F Y L+N ++ + F+++ ++
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 232 ICMRGYESHMTNVIVIKHLCKQGRLEEA-----EAHLNGLVGSGKELHRSELSFLIGVLC 286
C ++ T +IK CK R++E E GLVG+ F C
Sbjct: 391 DCFPNVVTYNT---LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 287 ESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
++ + ++VS+ LP Y + + GL G+++ AL F + S+ P
Sbjct: 448 DNAQIVFK-QMVSD--GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK-MEPDIYT 503
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YNI+I + + +++D ++L ++ + PN+VT ++ FC+ G+ + A LF
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ G P+ Y LI DG + ++R + D T + N L
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 156/704 (22%), Positives = 284/704 (40%), Gaps = 58/704 (8%)
Query: 118 SCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTL 177
+ FD A R P + H+ + I R LS R+ V + RS ++
Sbjct: 25 AAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSV 84
Query: 178 VVGYAIAGKPDIALHLLGRMR-FQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG 236
+ Y PD AL + RMR G + Y+ LLN+ E + + + G
Sbjct: 85 IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 237 YESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAV 295
++ T ++IK CK+ E+A L+ + G +
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK----------------------- 181
Query: 296 ELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
P +Y I L + G+LD+ALE F + + G P YNILI L
Sbjct: 182 ----------PDVFSYSTVINDLAKAGKLDDALELFDEMSE-RGVAPDVTCYNILIDGFL 230
Query: 356 RENRLKDVYELLMDM-NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+E K EL + ++ + PN+ T N ++ K G VD L+++ Q +
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
Y LI LC G +A V D T++T+ CR KI E +L
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNR 531
+E + N +Y+ + L G++++ ++ + + +Y I G +
Sbjct: 351 -MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNS 590
+ A ++ E++ G L +Y ++ CL + EM HG + + + N+
Sbjct: 410 VNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA 469
Query: 591 FIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQ 649
I G + ++ A M +NG S +++ ++ + +A F + + +
Sbjct: 470 LIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529
Query: 650 VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAV 709
K Y+ ++ GLC+ K D+ALEL + L+ GL + + +L+ LCS+ + +A+
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589
Query: 710 NLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE--------KEGEFLDSSML 761
++ E R T+ N++ +++++ E + D R K G D
Sbjct: 590 TVMANMEH--RNCTA---NLVTYNTLM--EGFFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Query: 762 TLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH 805
I+ C VSY+++ ++ +YT+N+L+R + +
Sbjct: 643 NTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 125/566 (22%), Positives = 220/566 (38%), Gaps = 45/566 (7%)
Query: 289 NRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
N R VEL+ + A V I+ + D+AL+ F++ R+ G P YN
Sbjct: 60 NHVSRIVELIRSQECKCDEDVALSV-IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYN 118
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
L+ + + V L + PN+ T N ++ CK + A + +
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE 178
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
G P+ +Y +I L G +A + S G PD ++ L + +E
Sbjct: 179 GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 469 WDLLDFALE-RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIM 524
+L D LE PN T++ +S L + GRV+D + + ++ ++Y+ +I
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 525 GFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPH 584
G + D A + E+ E+ + +Y +L + L +M H K
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES-LELWRIMEH-KNS 356
Query: 585 CDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
+I +N I G + K D A ++ LM G + ++
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT-------------------- 396
Query: 643 FNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL 702
Y I GLC + + AL + E+ G + + Y ++ LC
Sbjct: 397 --------------YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 703 KRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR-EKEGEFLDSSML 761
KR EA NLV K G L S + N L+ + + + LR K G
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 762 TLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQ 820
++I + + ++E++ + D+ TY++L+ L +D A EL+ + Q
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 821 RGLEPNRWTYGLMAHGFSNHGRKDEA 846
GLE + + ++ HG + G+ D+A
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDA 588
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 178/788 (22%), Positives = 316/788 (40%), Gaps = 118/788 (14%)
Query: 100 ETFVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFL 159
E+ V+ VLR ++S FF WAGRQ + HT + A+ ++ + +FL
Sbjct: 132 ESLVIEVLRLIARPSAVIS---FFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFL 188
Query: 160 RDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN 219
+ R + + LV + G IAL LGR++
Sbjct: 189 QQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKD-------------------- 228
Query: 220 NCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
R S T +I+ K RL+ A + + + L
Sbjct: 229 --------------FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274
Query: 280 FLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
LC+ ++ A+ LV E +P Y I GL + +EA++F + R +
Sbjct: 275 CFAYSLCKVGKWREALTLV-ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-ATS 332
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELL-MDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
+P V Y+ L+ L + +L +L M M E C P + N+++ +C G A
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI-FNSLVHAYCTSGDHSYA 391
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWD----GC-----PKEAYRVLRSSSGTGYFPDR 449
+L + G P Y+ Y LI ++C D C ++AY + ++ G ++
Sbjct: 392 YKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAA---GVVLNK 448
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM--- 506
S+ LC K ++ + ++ + + F+P++STYS+ ++ LC A ++E +L+
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 507 --RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHM 564
RG L V ++Y M+ F K+ + A + EM+E G +Y ++H ++
Sbjct: 509 MKRGGL--VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA--YL 564
Query: 565 DNPRTRFFNLL--EMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNAS 621
+ + N L M++ G P+ +++ IDG A + + A ++FE M S
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM-------CGS 617
Query: 622 SQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEML 681
+ + YF+ ++D + V T Y ++ G CKS + + A +L M
Sbjct: 618 KDVPDVDMYFKQ---------YDDNSERPNVVT--YGALLDGFCKSHRVEEARKLLDAMS 666
Query: 682 KVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVY 741
G P+ Y+ L+ LC + + EA + + G T + Y
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY--------------TY 712
Query: 742 HSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR 801
S +D + + + L S +L+ + L C P ++ Y ++
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKM-------------------LENSCAP-NVVIYTEMID 752
Query: 802 KLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
L D+A +L M ++G +PN TY M GF G+ + + M KG P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 861 PENTRNVI 868
T V+
Sbjct: 813 NYVTYRVL 820
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 145/613 (23%), Positives = 250/613 (40%), Gaps = 84/613 (13%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
++LV Y +G A LL +M G Y+IL+ S+ + ++ + +
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK--DSLNCDLLDLAE 433
Query: 235 RGYESHMTNVIVIKH---------LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ Y + +V+ LC G+ E+A + + ++G G S S ++ L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 286 CESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
C +++ E A L E G + Y + + + G +++A ++F + R+ G P
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV-GCTPN 552
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDM-NETCIP-------------------------- 376
V Y LI L+ ++ EL M +E C+P
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 377 ------------------------PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
PN+VT A+L FCK V+ A +L ++ S G P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
N + Y LI LC G EA V S G+ T+S+L + + + D +L
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 473 DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKS 529
LE PN Y+ + LC+ G+ ++ Y + +++ + +Y MI GF
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 530 NRGDIAARLLVEMKEKGYELKRSSYRHVL-HCLLHMDNPRTRFFNLLEMM--THGKPHCD 586
+ + LL M KG +YR ++ HC + NLLE M TH H
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCC--KNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA---SSQILVMKSYFRSRRISDALRFF 643
+ I+G NK + E L+ G A S L++ + +++R+ ALR
Sbjct: 851 GYRKVIEG---FNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 644 NDI---RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
++ +V + YN +I LC ++K + A +L EM K G+ P ++ + L++ L
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965
Query: 701 SLKRYYEAVNLVN 713
+ EA+ L++
Sbjct: 966 RNSKISEALLLLD 978
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 206/490 (42%), Gaps = 28/490 (5%)
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTN 243
A K ++A L M+ GL D + Y I+++S + N++ G ++
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 244 VIVIKHL-CKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFG 302
+ H K ++ A ++ G + S LI C++ + E+A ++
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 303 TSLPLEN------------------AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
S + + YG + G + R++EA + EG P +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL-DAMSMEGCEPNQ 674
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
+ Y+ LI L + +L + E+ +M+E P + T ++++ + K+ D+A ++ +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ +PN + Y +I LC G EAY++++ G P+ T++ + + K
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAK 521
I+ +LL+ + PN TY + C+ G ++ + + ++ + T Y K
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
+I GF K + LL E+ + S YR ++ L+ L E+ T
Sbjct: 855 VIEGFNKEFIESLG--LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 582 KPHCD---IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISD 638
D +NS I+ ANK + A ++F M + G++ S ++K FR+ +IS+
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Query: 639 ALRFFNDIRH 648
AL + I H
Sbjct: 973 ALLLLDFISH 982
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 210/459 (45%), Gaps = 14/459 (3%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC---ESNRFERAVELVSEF 301
IVI +C+ GR++EA L + G S ++ C E ++ + +E++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 302 GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
G P YG I L + +L EA E F + +G +P V Y LI + ++
Sbjct: 311 GLK-PNSYIYGSIIGLLCRICKLAEAEEAFSEMI-RQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
+ +M+ I P+++T A++ FC++G + A +LF+ GL P+ + + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
C G K+A+RV G P+ T++TL + LC+E +D +LL +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAKMIMGFIKSNRGDIAARL 538
PN TY+ V+ LC++G +E+ + G+ + +Y ++ + KS D A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 539 LVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGA 595
L EM KG + ++ +++ CL M + N M+ G P+ FNS +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW--MLAKGIAPNATTFNSLVKQY 606
Query: 596 MHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVST 654
N A +++ M G+ + + ++K + ++R + +A F +++ + VS
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 655 KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
Y+ +I G K K A E+ +M + GL E ++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 205/484 (42%), Gaps = 52/484 (10%)
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A+ +F + G+ N +Y +I +C G KEA+ +L GY PD ++ST+
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDL 510
N CR ++D++W L++ + PNS Y + LCR ++ + + +G L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 511 DKVTARFSYAKMIMGFIKSNRGDI--AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
Y +I GF K RGDI A++ EM + +Y ++
Sbjct: 349 PDTVV---YTTLIDGFCK--RGDIRAASKFFYEMHSRDITPDVLTYTAII---------- 393
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
+ F + +M+ GK +F M G+ ++ + ++
Sbjct: 394 SGFCQIGDMVEAGK------------------------LFHEMFCKGLEPDSVTFTELIN 429
Query: 629 SYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
Y ++ + DA R N I+ + Y +I GLCK D A EL EM K+GL P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDL 747
+I Y +V LC EAV LV +E AG + L+ S E+ ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEI 548
Query: 748 RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE--LEELIAKCFPVDIYTYNLLMRKL-T 804
+E G+ L +++T + CL E L ++AK + T+N L+++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 805 HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
+++ A ++ MC RG+ P+ TY + G EA EM KGF+ +T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 865 RNVI 868
+V+
Sbjct: 669 YSVL 672
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 195/485 (40%), Gaps = 20/485 (4%)
Query: 185 GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNV 244
G+ A HLL M +G D Y ++N + D + I + + N
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR---FGELDKVWKLIEVMKRKGLKPNS 316
Query: 245 IV----IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE 300
+ I LC+ +L EAE + ++ G + LI C+ A + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 301 FGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
+ P Y I G Q G + EA + F + +G P V + LI +
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCKAG 435
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
+KD + + M + PN+VT ++ CK G +D A EL + + GL PN Y
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
++ LC G +EA +++ G D T++TL +A C+ ++D+ ++L L +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDLDKVTARFSYAKMIMGFIKSNRG 532
P T++ ++ C G +EDG L +G T ++ ++ + N
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT---TFNSLVKQYCIRNNL 612
Query: 533 DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSF 591
A + +M +G +Y +++ N + +F EM G ++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 592 IDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV 651
I G + K AREVF+ M+R G+ + + ++ +R + ++I +
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYL 732
Query: 652 VSTKL 656
V +L
Sbjct: 733 VDEQL 737
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/555 (20%), Positives = 223/555 (40%), Gaps = 11/555 (1%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE-NRLKDVYELLM 368
+ V+ + LV G L EA F +K + G V N+ + RL ++ + +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVF-EKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
+ E + N+ + N V+ F C+LG + A L G +P+ ++Y ++ C G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
+ ++++ G P+ + ++ LCR CK+ E + + + +P++ Y+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 489 RFVSALCRAGRVEDG----YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKE 544
+ C+ G + Y M D +Y +I GF + A +L EM
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDL 603
KG E ++ +++ + + F M+ G P+ + + IDG D
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIV 662
A E+ M + G+ N + ++ +S I +A++ + + T Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
CKS + D A E+ EML GL P+I + VL+ C + L+N G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 723 TSFLGNVLLFHSMISPEVYHSCVDLRRE-KEGEFLDSSMLTLIIGAFSGCLRVSYSIQEL 781
+ N L+ I + + + G D ++ + +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 782 EELIAKCFPVDIYTYNLLMRK-LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNH 840
+E+ K F V + TY++L++ L +A E+FD+M + GL ++ + +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Query: 841 GRKDEAKRWVHEMLK 855
R D + E+++
Sbjct: 715 KRPDTIVDPIDEIIE 729
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 4/303 (1%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQI 232
+ ++ G+ G A L M +GL+ D + L+N + + +AF V + I
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+ +T +I LCK+G L+ A L+ + G + + + ++ LC+S E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 293 RAVELVSEF-GTSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
AV+LV EF L + Y + + G +D+A E ++ +G P V +N+L
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVL 567
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ L+D +LL M I PN T N+++ +C + A ++ G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
P+ Y+ L+ C KEA+ + + G G+ T+S L + K E +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 471 LLD 473
+ D
Sbjct: 688 VFD 690
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 210/459 (45%), Gaps = 14/459 (3%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC---ESNRFERAVELVSEF 301
IVI +C+ GR++EA L + G S ++ C E ++ + +E++
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 302 GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
G P YG I L + +L EA E F + +G +P V Y LI + ++
Sbjct: 311 GLK-PNSYIYGSIIGLLCRICKLAEAEEAFSEMI-RQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
+ +M+ I P+++T A++ FC++G + A +LF+ GL P+ + + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
C G K+A+RV G P+ T++TL + LC+E +D +LL +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAKMIMGFIKSNRGDIAARL 538
PN TY+ V+ LC++G +E+ + G+ + +Y ++ + KS D A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 539 LVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGA 595
L EM KG + ++ +++ CL M + N M+ G P+ FNS +
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW--MLAKGIAPNATTFNSLVKQY 606
Query: 596 MHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVST 654
N A +++ M G+ + + ++K + ++R + +A F +++ + VS
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 655 KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
Y+ +I G K K A E+ +M + GL E ++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 205/484 (42%), Gaps = 52/484 (10%)
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A+ +F + G+ N +Y +I +C G KEA+ +L GY PD ++ST+
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDL 510
N CR ++D++W L++ + PNS Y + LCR ++ + + +G L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 511 DKVTARFSYAKMIMGFIKSNRGDI--AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
Y +I GF K RGDI A++ EM + +Y ++
Sbjct: 349 PDTVV---YTTLIDGFCK--RGDIRAASKFFYEMHSRDITPDVLTYTAII---------- 393
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
+ F + +M+ GK +F M G+ ++ + ++
Sbjct: 394 SGFCQIGDMVEAGK------------------------LFHEMFCKGLEPDSVTFTELIN 429
Query: 629 SYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
Y ++ + DA R N I+ + Y +I GLCK D A EL EM K+GL P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDL 747
+I Y +V LC EAV LV +E AG + L+ S E+ ++
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM-DKAQEI 548
Query: 748 RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE--LEELIAKCFPVDIYTYNLLMRKL-T 804
+E G+ L +++T + CL E L ++AK + T+N L+++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 805 HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
+++ A ++ MC RG+ P+ TY + G EA EM KGF+ +T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 865 RNVI 868
+V+
Sbjct: 669 YSVL 672
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 195/485 (40%), Gaps = 20/485 (4%)
Query: 185 GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNV 244
G+ A HLL M +G D Y ++N + D + I + + N
Sbjct: 260 GRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR---FGELDKVWKLIEVMKRKGLKPNS 316
Query: 245 IV----IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE 300
+ I LC+ +L EAE + ++ G + LI C+ A + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 301 FGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
+ P Y I G Q G + EA + F + +G P V + LI +
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF-CKGLEPDSVTFTELINGYCKAG 435
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
+KD + + M + PN+VT ++ CK G +D A EL + + GL PN Y
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
++ LC G +EA +++ G D T++TL +A C+ ++D+ ++L L +
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDLDKVTARFSYAKMIMGFIKSNRG 532
P T++ ++ C G +EDG L +G T ++ ++ + N
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT---TFNSLVKQYCIRNNL 612
Query: 533 DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSF 591
A + +M +G +Y +++ N + +F EM G ++
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 592 IDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV 651
I G + K AREVF+ M+R G+ + + ++ +R + ++I +
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYL 732
Query: 652 VSTKL 656
V +L
Sbjct: 733 VDEQL 737
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/555 (20%), Positives = 223/555 (40%), Gaps = 11/555 (1%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE-NRLKDVYELLM 368
+ V+ + LV G L EA F +K + G V N+ + RL ++ + +
Sbjct: 177 VFDVFFQVLVDFGLLREARRVF-EKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
+ E + N+ + N V+ F C+LG + A L G +P+ ++Y ++ C G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
+ ++++ G P+ + ++ LCR CK+ E + + + +P++ Y+
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 489 RFVSALCRAGRVEDG----YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKE 544
+ C+ G + Y M D +Y +I GF + A +L EM
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDL 603
KG E ++ +++ + + F M+ G P+ + + IDG D
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIV 662
A E+ M + G+ N + ++ +S I +A++ + + T Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
CKS + D A E+ EML GL P+I + VL+ C + L+N G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 723 TSFLGNVLLFHSMISPEVYHSCVDLRRE-KEGEFLDSSMLTLIIGAFSGCLRVSYSIQEL 781
+ N L+ I + + + G D ++ + +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 782 EELIAKCFPVDIYTYNLLMRK-LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNH 840
+E+ K F V + TY++L++ L +A E+FD+M + GL ++ + +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Query: 841 GRKDEAKRWVHEMLK 855
R D + E+++
Sbjct: 715 KRPDTIVDPIDEIIE 729
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 4/303 (1%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQI 232
+ ++ G+ G A L M +GL+ D + L+N + + +AF V + I
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+ +T +I LCK+G L+ A L+ + G + + + ++ LC+S E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 293 RAVELVSEF-GTSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
AV+LV EF L + Y + + G +D+A E ++ +G P V +N+L
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GKGLQPTIVTFNVL 567
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ L+D +LL M I PN T N+++ +C + A ++ G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
P+ Y+ L+ C KEA+ + + G G+ T+S L + K E +
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Query: 471 LLD 473
+ D
Sbjct: 688 VFD 690
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 173/783 (22%), Positives = 307/783 (39%), Gaps = 94/783 (12%)
Query: 118 SCLKFFDWA---GRQPRFYHTRTTFV--AIFRILSCARLRPLVFDFLRDFRSCSF----P 168
S LK+F WA G+ P FY + +F + VFD + R F
Sbjct: 85 SALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVAD------KVFDEMITNRGKDFNVLGS 138
Query: 169 HRARYHDTLVVGYAIA-----GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN 223
R R D V + + G D AL + G+ + + +LNSL ++
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD--- 195
Query: 224 AFDVIAN---QICMRGYESHMTNV--IVIKHLCKQGRLEEAEAHLNGLVGSGKELHR--S 276
D+IA+ ++C G E + V+ L +G + +A + HR
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKA-----------LDFHRLVM 244
Query: 277 ELSFLIGVLC--------ESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDE 326
E F +G++ ++ E A L+S P N + I G + G +D
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
A + F+ + G P + Y+ LI + L ++L + ++V ++ +
Sbjct: 305 AFDLFKV-MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ K G + A ++ G+SPN + Y LI LC DG EA+ + G
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
P T+S+L + C+ + + L + ++ + P+ Y V L + G +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 507 RGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH 563
+ + R + + +I G+ + NR D A ++ M G + +++ V+ +
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 564 MDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
F M G +P + + ID KP + ++F+LMQRN I + +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 623 QILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEML 681
+V+ F+ RI DA +FFN+ I ++ YN MI G C + D A E FE+L
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELL 662
Query: 682 KVG-LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEV 740
KV P+ +L+ LC A+ + ++ + G + + V
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA---------------V 707
Query: 741 YHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLM 800
+ C ++ FS + + S + EE+ K I +Y++++
Sbjct: 708 TYGC-------------------LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 801 RKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFN 859
L +D+A +F + L P+ Y ++ G+ GR EA ML+ G
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 860 PPE 862
P +
Sbjct: 809 PDD 811
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 141/608 (23%), Positives = 255/608 (41%), Gaps = 58/608 (9%)
Query: 307 LENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYEL 366
LE Y ++ + G++ EA+ F ++ D P YN ++ L+ +++
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVF-ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKV 133
Query: 367 LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCW 426
M M + I P++ + + FCK AL L N+ S G N +AY ++
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
+ E Y + +G TF+ L LC++ + E LLD ++R +PN T
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 487 YSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMK 543
Y+ F+ LC+ G ++ M G L + + +Y +I G K+++ A L +M
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 544 EKGYELKRSSYRHVL--HCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANK 600
+G E +Y ++ +C M R + + +G P + S IDG H +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG--DAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 601 PDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNR 659
+ A +F GI N ++K I +A + N++ + ++ + +N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 660 MIVGLCK----SD-------------------------------KADIALELCFEMLKVG 684
++ GLCK SD K + ALE+ ML G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSC 744
++P + Y L+ LC ++ + + + G F N+LL S+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL-ESLCRYRKLDEA 550
Query: 745 VDLRREKEGEFLDSSMLTL--IIGAF--SGCLRVSYSI-QELEEL--IAKCFPVDIYTYN 797
+ L E + + ++ +T +I F +G L +Y++ +++EE ++ P TYN
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP----TYN 606
Query: 798 LLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
+++ T ++ A +LF M R L P+ +TY LM GF G + +++ EM++
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 857 GFNPPENT 864
GF P T
Sbjct: 667 GFIPSLTT 674
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 173/772 (22%), Positives = 310/772 (40%), Gaps = 111/772 (14%)
Query: 115 DILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYH 174
D + L+ F+ ++ F HT +T+ ++ L + + L D R H
Sbjct: 19 DPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHML--- 75
Query: 175 DTLVVG----YAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIAN 230
+ + VG Y GK A+++ RM F + F Y+ +++ L ++ ++ A+
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ----AH 131
Query: 231 QICMRGYESHMTN-----VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
++ MR + +T I +K CK R A LN + G
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG--------------- 176
Query: 286 CESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKV 345
CE N AY + G + E E F K + G C
Sbjct: 177 CEMNVV------------------AYCTVVGGFYEENFKAEGYELF-GKMLASGVSLCLS 217
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
+N L+ L ++ +K+ +LL + + + PN+ T N + C+ G +D A+ +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
+ G P+ + Y LI LC + +EA L G PD T++TL C+ +
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE------DGYLMRGDLDKVTARFSY 519
++ A+ F+P+ TY + LC G + L +G V Y
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL---Y 394
Query: 520 AKMIMGFIKSNRGDI--AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEM 577
+I G SN+G I AA+L EM EKG + ++ +++ L M + M
Sbjct: 395 NTLIKGL--SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 578 MTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
++ G P FN I G K + A E+ ++M NG+ + +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT-------------- 498
Query: 637 SDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
YN ++ GLCK+ K + +E M++ G P++ + +L+
Sbjct: 499 --------------------YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD-----LRREK 751
+ LC ++ EA+ L+ E + + + + F ++I + +D R+ +
Sbjct: 539 ESLCRYRKLDEALGLLE--EMKNKSVNP---DAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 752 EGEFLDSSMLT--LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DM 808
E + SS T +II AF+ L V+ + + +E++ +C D YTY L++ ++
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ + M + G P+ T G + + R EA +H M++KG P
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 13/333 (3%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ G + G A L M +GL + ++IL+N L + C + D + +
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 234 MRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+GY + T I+I Q ++E A L+ ++ +G + + L+ LC++++FE
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 293 RAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
+E + E G + P + + + L + +LDEAL + ++ + P V +
Sbjct: 514 DVMETYKTMVEKGCA-PNLFTFNILLESLCRYRKLDEALGLLEEMKN-KSVNPDAVTFGT 571
Query: 350 LIGRLLRENRLKDVYELLMDMNETC-IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
LI + L Y L M E + + T N ++ F + V +A +LF
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
L P+ Y+ ++ C G Y+ L G+ P T + N LC E ++ E
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
++ +++ +P + V+ +C + E
Sbjct: 692 AGIIHRMVQKGLVPEA------VNTICDVDKKE 718
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 38/325 (11%)
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
+P +N+ + + + D A +V+ M+ GI + S + MKS+ ++ R ALR
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 642 FFNDIRHQ------------------------------------VVVSTKLYNRMIVGLC 665
N++ Q V + +N+++ LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
K +L +++K G+ P++ Y + +Q LC AV +V + G +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 726 LGNVLLFHSMISPEVYHSCVDL-RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEEL 784
N L++ + + + V L + EG DS +I + V + + + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 785 IAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRK 843
+ F D +TY L+ L H + ++A LF+ +G++PN Y + G SN G
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 844 DEAKRWVHEMLKKGFNPPENTRNVI 868
EA + +EM +KG P T N++
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNIL 432
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/602 (21%), Positives = 241/602 (40%), Gaps = 80/602 (13%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
+Y +R + ++++A++ F S P + +N L + R + V
Sbjct: 37 SYKERLRNGIVDIKVNDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M I +M TM ++ +C+ + A + + G P+ + + L+ C +G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
EA ++ PD T STL N LC + ++ E L+D +E F P+ TY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 490 FVSALCRAGR-------------------------VEDGYLMRGDLDKVTARF------- 517
++ LC++G V D G D + F
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 518 ------SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN--PRT 569
+Y+ +I G + D A++L EM + ++ ++ +
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 570 RFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
+N EM+T G P +NS IDG N A ++F+LM G + + +++
Sbjct: 336 ELYN--EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 629 SYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
SY +++R+ D +R F +I + ++ +T YN +++G C+S K + A EL EM+ G+ P
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDL 747
S+ Y +L+ LC +A+ + +K+ R+T +G +Y+
Sbjct: 454 SVVTYGILLDGLCDNGELNKALEIFEKMQKS--RMTLGIG------------IYN----- 494
Query: 748 RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH- 806
+II +V + L K D+ TYN+++ L
Sbjct: 495 ---------------IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 807 DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
+ +A LF +M + G P+ +TY ++ + + EM GF+ +T
Sbjct: 540 SLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK 599
Query: 867 VI 868
++
Sbjct: 600 MV 601
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 201/478 (42%), Gaps = 21/478 (4%)
Query: 234 MRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+ G E M T I+I C++ +L A + L G E S L+ C R
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 293 RAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
AV LV P I GL GR+ EAL + + GF P +V Y +
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY-GFQPDEVTYGPV 216
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ RL + +L M E I ++V + V+ CK G D AL LFN G+
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
+ + Y LI LC DG + ++LR G PD TFS L + +E K+ E +
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 471 LLDFALERRFMPNSSTYSRFVSALCR------AGRVEDGYLMRG-DLDKVTARFSYAKMI 523
L + + R P++ TY+ + C+ A ++ D + +G + D VT Y+ +I
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT----YSILI 392
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL--HCLLHMDNPRTRFFNLLEMMTHG 581
+ K+ R D RL E+ KG +Y ++ C N F EM++ G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ--EMVSRG 450
Query: 582 KPHCDI-FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
P + + +DG + + A E+FE MQ++ + +++ + ++ DA
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 641 RFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
F + + V YN MI GLCK A L +M + G P Y +L++
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 217/521 (41%), Gaps = 19/521 (3%)
Query: 107 LRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCS 166
LR+G D + + F+ + Q R T F + ++ + LV F +
Sbjct: 42 LRNGIVDIKVNDAIDLFE-SMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLA-ENNCYNAF 225
H ++ Y K A +LGR G + D + L+N E A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 226 DVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
++ + M+ +T +I LC +GR+ EA ++ +V G + ++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 286 CESNRFERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
C+S A++L + + Y + I L + G D+AL F + + +G
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE-MEMKGIKAD 279
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
V Y+ LIG L + + D ++L +M I P++VT +A++ F K G + A EL+N
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
G++P+ + Y LI C + C EA ++ G PD T+S L N+ C+
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG------YLMRGDLDKVTARF 517
++D+ L + +PN+ TY+ V C++G++ + RG V
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV--- 456
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH---MDNPRTRFFNL 574
+Y ++ G + + A + +M++ L Y ++H + + +D+ + F +L
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 575 LEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
+ KP +N I G A +F M+ +G
Sbjct: 517 SDKGV--KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 6/217 (2%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
+ L+ Y A + D + L + +GL + Y+ L+ ++ NA + ++
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 234 MRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
RG S +T I++ LC G L +A + S L + +I +C +++ +
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 293 RAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
A L +S+ G P Y V I GL + G L EA FR+ ++ +G P YNI
Sbjct: 508 DAWSLFCSLSDKGVK-PDVVTYNVMIGGLCKKGSLSEADMLFRKMKE-DGCTPDDFTYNI 565
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
LI L + L EL+ +M + T+ V+
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 240/560 (42%), Gaps = 35/560 (6%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
++E F G+ Y +LIG+L K + LL+ M + I +++
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 387 CFFCKLGMVDVALEL-FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGY 445
+ K G L R+ + P + +Y ++ L C K A V
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 446 FPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV----- 500
P TF + A C +ID LL + +PNS Y + +L + RV
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 501 --EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
E+ +LM D T + +I+G K +R + AA+++ M +G+ +Y +++
Sbjct: 274 LLEEMFLMGCVPDAET----FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 559 HCLLHM---DNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVF-ELMQRN 614
+ L + D + F+ + KP IFN+ I G + + D A+ V +++
Sbjct: 330 NGLCKIGRVDAAKDLFYRI------PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 615 GIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIA 673
GI+ + + ++ Y++ + AL +D+R++ + Y ++ G CK K D A
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 674 LELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFH 733
+ EM GL P+ + L+ C R EAV + + G + +V F+
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK-----PDVYTFN 498
Query: 734 SMIS-----PEVYHSCVDLRRE-KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK 787
S+IS E+ H+ LR EG ++ +I AF + + + + E++ +
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 788 CFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
P+D TYN L++ L ++DKA LF++M + G P+ + ++ +G G +EA
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 847 KRWVHEMLKKGFNPPENTRN 866
+ EM+ +G P T N
Sbjct: 619 VEFQKEMVLRGSTPDIVTFN 638
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 199/493 (40%), Gaps = 19/493 (3%)
Query: 135 TRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLL 194
T ++ + IL + + D S P ++ + + D AL LL
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLL 240
Query: 195 GRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQICMRGYESHMTNVIVIKHLCKQ 253
M G + Y L++SL++ N N A ++ M T VI LCK
Sbjct: 241 RDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300
Query: 254 GRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGV 313
R+ EA +N ++ G +L+ LC+ R + A +L + P +
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRIPKPEIVIFNT 358
Query: 314 WIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNET 373
I G V GRLD+A S G VP YN LI +E + E+L DM
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 374 CIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEA 433
PN+ + ++ FCKLG +D A + N S GL PN + + LI C + EA
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 434 YRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSA 493
+ R G PD TF++L + LC +I LL + + N+ TY+ ++A
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 494 LCRAGRVEDGYLMRGD-------LDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
R G +++ + + LD++T Y +I G ++ D A L +M G
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEIT----YNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 547 YELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDL 603
+ S +++ C M F EM+ G P FNS I+G A + +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQK--EMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 604 AREVFELMQRNGI 616
+F +Q GI
Sbjct: 653 GLTMFRKLQAEGI 665
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 211/532 (39%), Gaps = 41/532 (7%)
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P YN+++ L+ N K + DM IPP + T V+ FC + +D AL L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
++ G PN + Y+ LI +L EA ++L G PD TF+ + LC+
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE-------------------- 501
+I+E +++ L R F P+ TY ++ LC+ GRV+
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 502 -DGYLMRGDLDKVTARFS--------------YAKMIMGFIKSNRGDIAARLLVEMKEKG 546
G++ G LD A S Y +I G+ K +A +L +M+ KG
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 547 YELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAR 605
+ SY ++ + + L EM G KP+ FN I ++ A
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGL 664
E+F M R G + + ++ I AL D I VV +T YN +I
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
+ + A +L EM+ G Y L++ LC +A +L + G ++
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 725 FLGNVLLFHSMISPEVYHSCVDLRREK--EGEFLDSSMLTLIIGAFSGCLRVSYSIQELE 782
N+L+ + + + V+ ++E G D +I R+ +
Sbjct: 600 ISCNILI-NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 783 ELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLM 833
+L A+ P D T+N LM L + AC L D + G PN T+ ++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 156/687 (22%), Positives = 262/687 (38%), Gaps = 120/687 (17%)
Query: 115 DILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYH 174
++ + ++ F W G Q + H+ + + L + L + +
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLF 149
Query: 175 DTLVVGYAIAGKPDIALHLLGRMR-FQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQI 232
+++ Y AG P L+ MR + Y+++L L NC+ A +V + +
Sbjct: 150 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 209
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSG---------------------- 270
+ + T +V+K C ++ A + L + G
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 271 KELHRSELSFLIGV-------------LCESNRFERAVELVSEFGTS--LPLENAYGVWI 315
+ L E FL+G LC+ +R A ++V+ P + YG +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLM 329
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM-NETC 374
GL + GR+D A + F + E V +N LI + RL D +L DM
Sbjct: 330 NGLCKIGRVDAAKDLFYRIPKPE-----IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
I P++ T N+++ + K G+V +ALE+ + G PN +Y L+ C G EAY
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
VL S G P+ F+ L +A C+E +I E ++ + P+ T++ +S L
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 495 CRAGRVEDG-YLMRGDLDK--VTARFSYAKMIMGFIKSNRGDIA-ARLLVEMKEKGYELK 550
C ++ +L+R + + V +Y +I F++ RG+I AR LV
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR--RGEIKEARKLVN--------- 553
Query: 551 RSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI-FNSFIDGAMHANKPDLAREVFE 609
EM+ G P +I +NS I G A + D AR +FE
Sbjct: 554 -------------------------EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDK 669
M R+G +A S I N +I GLC+S
Sbjct: 589 KMLRDG---HAPSNISC-------------------------------NILINGLCRSGM 614
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
+ A+E EM+ G P I + L+ LC R + + + + G + N
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFL 756
L+ VY +C+ L E F+
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 4/316 (1%)
Query: 154 LVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILL 213
L + L D R+ + LV G+ GK D A ++L M GL + G++ L+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 214 NSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
++ + + I ++ +G + + T +I LC+ ++ A L ++ G
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 273 LHRSELSFLIGVLCESNRFERAVELVSE--FGTSLPLENAYGVWIRGLVQGGRLDEALEF 330
+ + LI + A +LV+E F S E Y I+GL + G +D+A
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSL 586
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
F +K +G P + NILI L R +++ E +M P++VT N+++ C
Sbjct: 587 F-EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
+ G ++ L +F G+ P+ + + L+ LC G +A +L G+ P+ R
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 451 TFSTLANALCRECKID 466
T+S L ++ + +D
Sbjct: 706 TWSILLQSIIPQETLD 721
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 6/325 (1%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQI 232
+++L+ GY G +AL +L MR +G + + Y IL++ + A++V+ N++
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL-NEM 450
Query: 233 CMRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
G + + +I CK+ R+ EA + G + + LI LCE +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 292 ERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
+ A+ L+ + + + N Y I ++ G + EA + + +G ++ YN
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV-FQGSPLDEITYNS 569
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
LI L R + L M P+ ++ N ++ C+ GMV+ A+E G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
+P+ + + LI LC G ++ + R G PD TF+TL + LC+ + +
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 470 DLLDFALERRFMPNSSTYSRFVSAL 494
LLD +E F+PN T+S + ++
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSI 714
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/488 (21%), Positives = 211/488 (43%), Gaps = 50/488 (10%)
Query: 237 YESHMTNVI----VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
Y ++ ++I +I+ C+ G+ +A L L GSG + +I C++
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
A+ ++ S P Y +R L G+L +A+E + + + P + Y ILI
Sbjct: 190 NALSVLDRMSVS-PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIE 247
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
R++ + +LL +M + P++VT N ++ CK G +D A++ N G P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
N + + ++ ++C G +A ++L G+ P TF+ L N LCR+ + D+L
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 473 DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGF 526
+ + PNS +Y+ + C+ +++ L+++ +R +Y M+
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY---LERMVSRGCYPDIVTYNTMLTAL 424
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD 586
K + + A +L ++ KG P
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCS----------------------------------PVLI 450
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
+N+ IDG A K A ++ + M+ + + + ++ R ++ +A++FF++
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 647 -RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
R + + +N +++GLCKS + D A++ M+ G P+ Y +L++ L
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 706 YEAVNLVN 713
EA+ L+N
Sbjct: 571 KEALELLN 578
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 206/466 (44%), Gaps = 17/466 (3%)
Query: 107 LRHGGDDGDILSCLKFFD---WAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFR 163
LR G++ KF + + G P TT + F L R + + L
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPC-TTLIRGFCRLGKTRKAAKILEILEG-- 165
Query: 164 SCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CY 222
S + P Y + ++ GY AG+ + AL +L RM + D Y+ +L SL ++
Sbjct: 166 SGAVPDVITY-NVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 223 NAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLI 282
A +V+ + Y +T I+I+ C+ + A L+ + G + L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 283 GVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGF 340
+C+ R + A++ +++ +S P + + +R + GR +A + +GF
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML-RKGF 340
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
P V +NILI L R+ L ++L M + PN ++ N +L FCK +D A+E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
G P+ + Y ++ LC DG ++A +L S G P T++T+ + L
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLA 460
Query: 461 RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---F 517
+ K + LLD + P++ TYS V L R G+V++ + +++ R
Sbjct: 461 KAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH 563
++ +++G KS + D A LV M +G + +SY ++ L +
Sbjct: 521 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 229/533 (42%), Gaps = 47/533 (8%)
Query: 299 SEFGTSLPLENA-YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
S +S LE+ +R +V+ G L+E +F + G VP + LI R
Sbjct: 92 SSVNSSFALEDVESNNHLRQMVRTGELEEGFKFL-ENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
+ + ++L + + P+++T N ++ +CK G ++ AL + + S +SP+ + Y
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTY 207
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
++ +LC G K+A VL +PD T++ L A CR+ + LLD +
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDI 534
R P+ TY+ V+ +C+ GR+++ D+ + ++ ++ + R
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM-THG-KPHCDIFNSFI 592
A +LL +M KG+ ++ ++L L R ++LE M HG +P+ +N +
Sbjct: 328 AEKLLADMLRKGFSPSVVTF-NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 593 DGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVV 652
G K D A E E M G + + ++ + + ++ DA+ N + +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 653 STKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ YN +I GL K+ K A++L EM L P Y LV L + EA+
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 712 VNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGC 771
+ +E+ G R N + F+S++ C + ++ +FL
Sbjct: 507 FHEFERMGIR-----PNAVTFNSIM----LGLCKSRQTDRAIDFL--------------- 542
Query: 772 LRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDK-ACELFDRMCQRGL 823
+ I C P + +Y +L+ L + M K A EL + +C +GL
Sbjct: 543 ---VFMINR------GCKPNET-SYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 190/416 (45%), Gaps = 18/416 (4%)
Query: 241 MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE 300
+T ++I CK G + A + L+ + S + + ++ LC+S + ++A+E++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVV---TYNTILRSLCDSGKLKQAMEVLDR 229
Query: 301 F--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
P Y + I + + A++ + RD G P V YN+L+ + +E
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD-RGCTPDVVTYNVLVNGICKEG 288
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
RL + + L DM + PN++T N +L C G A +L + G SP+ + +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
LI LC G A +L G P+ +++ L + C+E K+D + L+ + R
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIKSNRG 532
P+ TY+ ++ALC+ G+VED + L++++++ +Y +I G K+ +
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEI---LNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 533 DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD--NPRTRFFNLLEMMTHGKPHCDIFNS 590
A +LL EM+ K + +Y ++ L + +FF+ E M +P+ FNS
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI-RPNAVTFNS 524
Query: 591 FIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
+ G + + D A + M G N +S ++++ +AL N++
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 5/340 (1%)
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESH-MTNVIVIK 248
A+ LL MR +G D Y++L+N + + + N + G + + +T+ I+++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 249 HLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT--SLP 306
+C GR +AE L ++ G + LI LC RA++++ + P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 307 LENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYEL 366
+Y + G + ++D A+E+ ++ S G P V YN ++ L ++ +++D E+
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYL-ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 367 LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCW 426
L ++ P ++T N V+ K G A++L + L P+ + Y L+ L
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
+G EA + G P+ TF+++ LC+ + D D L F + R PN ++
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 487 YSRFVSALCRAGRVEDGYLMRGDL-DKVTARFSYAKMIMG 525
Y+ + L G ++ + +L +K + S A+ + G
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQVAG 596
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 116/532 (21%), Positives = 209/532 (39%), Gaps = 82/532 (15%)
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
V N + +++R L++ ++ L +M P+++ ++ FC+LG A ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
G P+ + Y +I C G A VL S + PD T++T+ +LC K
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK 219
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FS 518
+ + ++LD L+R P+ TY+ + A CR V G+ M+ LD++ R +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV--GHAMK-LLDEMRDRGCTPDVVT 276
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM 578
Y ++ G K R D A + L +M G + ++ +L + L +M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 579 THG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G P FN I+ A ++ E M ++G N+ S
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS--------------- 381
Query: 638 DALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
YN ++ G CK K D A+E M+ G P I Y ++
Sbjct: 382 -------------------YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 698 KLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLD 757
LC + +AV ++N G VL+ Y++ +D
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKG------CSPVLI--------TYNTVID----------- 457
Query: 758 SSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFD 816
+ + +I+ L+E+ AK D TY+ L+ L+ +D+A + F
Sbjct: 458 ---------GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 817 RMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ G+ PN T+ + G + D A ++ M+ +G P E + ++
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 42/321 (13%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
+ D +RD R C+ P Y + LV G G+ D A+ L M G + ++I+L
Sbjct: 261 LLDEMRD-RGCT-PDVVTY-NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 215 SLAENNCYN-------------------AFDVIANQICMRGYESHMTNVI---------- 245
S+ + F+++ N +C +G +++
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 246 -------VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
++ CK+ +++ A +L +V G + ++ LC+ + E AVE++
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 299 SEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR 356
++ + P+ Y I GL + G+ +A++ + R ++ P + Y+ L+G L R
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR-AKDLKPDTITYSSLVGGLSR 496
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMA 416
E ++ + + + I PN VT N+++ CK D A++ G PN +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 417 YKYLILTLCWDGCPKEAYRVL 437
Y LI L ++G KEA +L
Sbjct: 557 YTILIEGLAYEGMAKEALELL 577
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 191/457 (41%), Gaps = 45/457 (9%)
Query: 250 LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN 309
LCK RL++A + +V SG S ++L+ LC+ A++LV + N
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 310 --AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
Y +RGL G L+++L+F ++ +G P Y+ L+ +E + +LL
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFV-ERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLL 234
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
++ PN+V+ N +L FCK G D A+ LF G N ++Y L+ LC D
Sbjct: 235 DEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCD 294
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANA----------------------------- 458
G +EA +L G P T++ L N+
Sbjct: 295 GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTAT 354
Query: 459 --------LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
LC+E K+D + LD + RR PN TY+ S +V++ + + L
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 511 ---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH--CLLHMD 565
K Y +I + A +LL EM G++ +Y ++ CL M
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 566 NPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQIL 625
+++E + KP D FN+ I G + DLA EVFE+M M N ++ +
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAI 534
Query: 626 VMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIV 662
+++ + A +++R + V+ +R+++
Sbjct: 535 LVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVM 571
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 8/385 (2%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFD 226
+P ++ LV G + G + +L + R+ +GL + F Y LL + + +
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 227 VIANQICMRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ ++I ++G E ++ + +++ CK+GR ++A A L G + + + L+ L
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 286 CESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQ-KRDSEGFVP 342
C R+E A L++E G P Y + I L GR ++AL+ ++ + + F
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 343 CKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELF 402
YN +I RL +E ++ V + L +M PN T NA+ V A +
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYII 411
Query: 403 NSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRE 462
S S + YK +I +LC G A+++L + G+ PD T+S L LC E
Sbjct: 412 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 463 CKIDEMWDLLDFALE-RRFMPNSSTYSRFVSALCRAGRVE---DGYLMRGDLDKVTARFS 518
++L E P ++ + LC+ R + + + M + ++ +
Sbjct: 472 GMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 531
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMK 543
YA ++ G + ++A +L E++
Sbjct: 532 YAILVEGIAHEDELELAKEVLDELR 556
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 188/472 (39%), Gaps = 74/472 (15%)
Query: 253 QGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYG 312
+ L ++ +HL LV G + + + + L+ LC++NR ++A+ ++ +S
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSS-------- 135
Query: 313 VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNE 372
G +P Y L+ +L + + +L+ M +
Sbjct: 136 --------------------------GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMED 169
Query: 373 TCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKE 432
P N VT NA++ C LG ++ +L+ Q GL+PN Y +L+ + E
Sbjct: 170 HGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 433 AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVS 492
A ++L G P+ +++ L C+E + D+ L + F N +Y+ +
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 493 ALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
LC GR E+ + ++ D+ + +Y +I R + A ++L EM + ++
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 550 K--RSSYRHVLHCLLHMDNPRTRFFNLLEMM-THGKPHCDIFNSFIDGAMHANKPDLARE 606
+ +SY V+ L L EM+ KP+ +N+ H +K +E
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSK---VQE 406
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCK 666
F ++Q ++N Q + Y +I LC+
Sbjct: 407 AFYIIQS---LSN----------------------------KQKCCTHDFYKSVITSLCR 435
Query: 667 SDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKA 718
A +L +EM + G +P Y L++ LC + A+ ++++ E++
Sbjct: 436 KGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES 487
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 138/333 (41%), Gaps = 48/333 (14%)
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH--------GKPHCD 586
+ ++ + K+ + + SS++ L D+PR+ NL + +H KP+
Sbjct: 48 STQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVA 107
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
+ AN+ A V ELM +GI+ +AS+ ++ + + A++ +
Sbjct: 108 HSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM 167
Query: 647 R-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
H +T YN ++ GLC + +L+ +++ GL P+ Y L++ +
Sbjct: 168 EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT 227
Query: 706 YEAVNLVN-VYEKAGR-RLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL 763
EAV L++ + K G L S+ NVLL KEG D+ L
Sbjct: 228 DEAVKLLDEIIVKGGEPNLVSY--NVLLTGFC---------------KEGRTDDAMAL-- 268
Query: 764 IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLT-HHDMDKACELFDRMCQRG 822
EL AK F ++ +YN+L+R L ++A L M
Sbjct: 269 -----------------FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 823 LEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK 855
P+ TY ++ + + HGR ++A + + EM K
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 659 RMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKA 718
+++ LCK+++ A+ + M+ G+ P Y LV +LC A+ LV E
Sbjct: 111 QLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 719 GRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSI 778
G + N + +++++ ++G+ ++ S+
Sbjct: 171 G-----YPSNTVTYNALVRG-----------------------LCMLGS------LNQSL 196
Query: 779 QELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGF 837
Q +E L+ K + +TY+ L+ D+A +L D + +G EPN +Y ++ GF
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGF 256
Query: 838 SNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
GR D+A E+ KGF + N++
Sbjct: 257 CKEGRTDDAMALFRELPAKGFKANVVSYNIL 287
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/424 (19%), Positives = 165/424 (38%), Gaps = 77/424 (18%)
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
+G+ + PD + S + E + + + L+ + PN + ++ + LC+A R+
Sbjct: 63 TGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRL 122
Query: 501 EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+ A R++ M G S+Y ++++
Sbjct: 123 KK--------------------------------AIRVIELMVSSGIIPDASAYTYLVNQ 150
Query: 561 LLHMDNPRTRFFNLLEMMTHGKPHCDI-FNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
L N + +M HG P + +N+ + G + + + E + + G+ N
Sbjct: 151 LCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDI----RHQVVVSTKLYNRMIVGLCKSDKADIALE 675
A + ++++ ++ R +A++ ++I +VS YN ++ G CK + D A+
Sbjct: 211 AFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS---YNVLLTGFCKEGRTDDAMA 267
Query: 676 LCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM 735
L E+ G ++ Y +L++ LC R+ EA +L+ + G R S + +L +S+
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMD-GGDRAPSVVTYNILINSL 326
Query: 736 ISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIA--KCFPVDI 793
AF G R ++Q L+E+ F V
Sbjct: 327 -------------------------------AFHG--RTEQALQVLKEMSKGNHQFRVTA 353
Query: 794 YTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHE 852
+YN ++ +L +D + D M R +PN TY + ++ + EA +
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 853 MLKK 856
+ K
Sbjct: 414 LSNK 417
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 144/617 (23%), Positives = 253/617 (41%), Gaps = 54/617 (8%)
Query: 103 VLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDF 162
V VLR D+ LKFF WA RQ R+ H + ++ +LS +L L
Sbjct: 177 VCAVLRSQDDE---RVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLM 233
Query: 163 RSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNC 221
+ ++V Y+ AG+ AL +L M+ G++ + + ++ N
Sbjct: 234 KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRL 293
Query: 222 YNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL 281
A + + + +T +I+ C R+EEA L + G + +
Sbjct: 294 EKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTI 353
Query: 282 IGVLCESNRFERAVELVSEFGTS---LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
+G LC+ R +L+ + +P + Y I L + DEAL F + ++ +
Sbjct: 354 MGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE-K 412
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDM-NETCIPPNMVTMNAVLCFFCKLGMVDV 397
GF K+ Y+ ++ L +E R+ + +L+ +M ++ PP++VT AV+ FC+LG VD
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A +L G PN ++Y L+ +C G EA ++ S + P+ T+S + +
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED--------------- 502
L RE K+ E D++ + + F P + + +LCR GR +
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 503 ----------GYLMRGDLD-------------KVTARFSYAKMIMGFIKSNRGDIAARLL 539
G+ +LD K F+Y ++ K R A L+
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHAN 599
+M KG + +YR V+H M +LE M + I+N I+
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKV-DDLVAILEKMISRQKCRTIYNQVIEKLCVLG 711
Query: 600 KPDLAREVFELMQRNGIMTNASSQILVMKSYFRS----RRISDALRFFN-DIRHQVVVST 654
K + A + + R ++A + +M+ Y + A R FN ++ V +
Sbjct: 712 KLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCE 771
Query: 655 KLYNRMIVGLCKSDKAD 671
KL R+++ K D+AD
Sbjct: 772 KLSKRLVLK-GKVDEAD 787
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 17/276 (6%)
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV---VSTKLYNRM 660
A +V LMQR G+ N + + R+ R+ ALRF R QVV + YN M
Sbjct: 261 ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE--RMQVVGIVPNVVTYNCM 318
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
I G C + + A+EL +M G P Y ++ LC KR E +L+ K
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE-- 376
Query: 721 RLTSFLGNVLLFHSMISPEVYHSCVD-----LRREKEGEF-LDSSMLTLIIGAFSGCLRV 774
+ + + ++++I H D L+ +E F +D + I+ A R+
Sbjct: 377 --HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 775 SYSIQELEELIAKCF-PVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGL 832
S + + E+++K P D+ TY ++ ++DKA +L M G +PN +Y
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 833 MAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ +G G+ EA+ ++ + ++P T +VI
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 192/488 (39%), Gaps = 21/488 (4%)
Query: 397 VALELFN-SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
VAL+ F + Q+ + M Y ++ L + + RVL G + FS +
Sbjct: 189 VALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRV 248
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDKV 513
+ R ++ + +L PN + + RA R+E +L R + +
Sbjct: 249 MVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGI 308
Query: 514 TARF-SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+Y MI G+ +R + A LL +M KG + SY ++ L R
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK----EKRIV 364
Query: 573 NLLEMMT-----HG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
+ ++M HG P +N+ I + D A + Q G + +
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 627 MKSYFRSRRISDALRFFNDI--RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
+ + + R+S+A N++ + Y ++ G C+ + D A +L M G
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSC 744
P+ Y L+ +C + EA ++N+ E+ S +V++ ++ +C
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 745 VDLRREK--EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK 802
D+ RE +G F + L++ + R + + +EE + K +++ + ++
Sbjct: 545 -DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Query: 803 LTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP- 860
+D +D A + D M + +TY + GR EA + +ML KG +P
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
Query: 861 PENTRNVI 868
P R VI
Sbjct: 664 PVTYRTVI 671
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 221/514 (42%), Gaps = 39/514 (7%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN--AFDVIANQIC 233
L+ YA G + A+ GRM+ D F Y+++L + + AF V +
Sbjct: 132 VLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLK 191
Query: 234 MRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
+ T I++ L K+GR +A+ + + G G +R + LI LC+ +
Sbjct: 192 CNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 294 AVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A +L E TS P A+ + G + GR+ EA E R + +GFV Y+ LI
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL-FEKDGFVLGLRGYSSLI 310
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
L R R +EL +M + I P+++ ++ K G ++ AL+L +S G+S
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
P+ Y +I LC G +E + S T FPD T + L ++CR + E ++
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNR 531
+ P+ +T++ + LC++G +++ L+ ++ + ++ S+
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL------SHS 484
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSF 591
G+ R M E G LK +YR + H F + T P +N
Sbjct: 485 GN---RSFDTMVESGSILK--AYRDLAH-----------FAD-----TGSSPDIVSYNVL 523
Query: 592 IDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF---NDIRH 648
I+G A D A ++ ++Q G+ ++ + ++ R R +A + F +D RH
Sbjct: 524 INGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH 583
Query: 649 QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLK 682
S +Y ++ C+ K +A L + LK
Sbjct: 584 ----SPAVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 174/422 (41%), Gaps = 32/422 (7%)
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFM-----PNSSTYSRFVSALCRAGRVE 501
PD T++ + + RE E++ +L FA+ + PN T+ + L + GR
Sbjct: 160 PDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTS 215
Query: 502 DGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
D M D+ R +Y +I G + D A +L EM+ G ++ +L
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 559 HCLLHMDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGI 616
+ F LL + + ++S IDG A + A E++ M + I
Sbjct: 276 DGFCKLGR-MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALE 675
+ ++++ ++ +I DAL+ + + + + T YN +I LC +
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 676 LCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM 735
L EM + P + +L+ +C EA + EK+G + N L+
Sbjct: 395 LQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454
Query: 736 ISPEVYHSCVDLRREKEGE----FL------DSSMLTLIIGAFSGCLRVSYSIQELEELI 785
S E+ + + L + + G FL + S T++ SG + +Y ++L
Sbjct: 455 KSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVE---SGSILKAY--RDLAHFA 509
Query: 786 AKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKD 844
DI +YN+L+ D+D A +L + + +GL P+ TY + +G GR++
Sbjct: 510 DTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREE 569
Query: 845 EA 846
EA
Sbjct: 570 EA 571
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 5/270 (1%)
Query: 603 LAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMI 661
LA V+ M + N + ++M ++ R SDA + F+D+ + + ++ Y +I
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
GLC+ AD A +L +EM G P + L+ C L R EA L+ ++EK G
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFV 300
Query: 722 LTSFLGNVLLFHSMISPEVYHSCVDLRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQ 779
L G L + Y +L K+ D + T++I S ++ +++
Sbjct: 301 L-GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALK 359
Query: 780 ELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFS 838
L + +K D Y YN +++ L +++ L M + P+ T+ ++
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 839 NHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+G EA+ E+ K G +P T N +
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 226/531 (42%), Gaps = 25/531 (4%)
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
+L + +L D +L +M ++ P++V N +L K+ D+ + L +S +
Sbjct: 55 VLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD 114
Query: 414 YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
+Y LI C A VL GY PD T S+L N C +I E L+D
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174
Query: 474 FALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFI 527
+ PN+ T++ + L + + + +D++ AR F+Y ++ G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL---IDRMVARGCQPDLFTYGTVVNGLC 231
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCD 586
K D+A LL +M++ E Y ++ L + N EM G +P+
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291
Query: 587 IFNSFIDGAMHANK-PDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
+NS I + + D +R + ++++R I N + ++ ++ + ++ +A + +++
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 646 -IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR 704
I+ + Y+ +I G C D+ D A + M+ P++ Y L++ C KR
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 705 YYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE------KEGEFLDS 758
E + L + G +GN + ++++I D+ ++ +G D
Sbjct: 411 VEEGMELFREMSQRG-----LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 759 SMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDR 817
++++ ++ ++ E L DIYTYN+++ + ++ +LF
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 818 MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ +G++PN Y M GF G K+EA EM + G P T N +
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 215/531 (40%), Gaps = 44/531 (8%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
+ L+ A K D+ + L RM+ + D + Y+IL+N + + ++
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 235 RGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
GYE + + ++ C R+ EA A ++ + + + + LI L N+
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 294 AVELVSEFGT--SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR-YNIL 350
AV L+ P YG + GL + G +D AL K+ +G + V Y +
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL--KKMEKGKIEADVVIYTTI 261
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I L + D L +M+ I PN+VT N+++ C G A L + + +
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
+PN + + LI +G EA ++ PD T+S+L N C ++DE
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFI 527
+ + + + PN TY+ + C+A RVE+G + ++ + V +Y +I G
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI 587
++ D+A ++ +M G P
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVP----------------------------------PDIIT 467
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR 647
++ +DG K + A VFE +Q++ + + + ++++ ++ ++ D F +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 648 HQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
+ V + +Y MI G C+ + A L EM + G P+ Y L++
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 177/399 (44%), Gaps = 17/399 (4%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
+TL+ G + K A+ L+ RM +G D F Y ++N L + + + ++
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 235 RGYESHMT-NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
E+ + +I LC + +A + G + + LI LC R+
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 294 AVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQ--KRDSEGFVPCKVRYNI 349
A L+S+ P + I V+ G+L EA + + + KR + P Y+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID---PDIFTYSS 365
Query: 350 LIGRLLRENRL---KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
LI +RL K ++EL++ ++ C P N+VT N ++ FCK V+ +ELF S
Sbjct: 366 LINGFCMHDRLDEAKHMFELMI--SKDCFP-NVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
Q GL N + Y LI L G A ++ + G PD T+S L + LC+ K++
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMI 523
+ + ++ + + P+ TY+ + +C+AG+VEDG+ + L + Y MI
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
GF + + A L EMKE G +Y ++ L
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/529 (21%), Positives = 212/529 (40%), Gaps = 42/529 (7%)
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YNILI R ++L +L M + P++VT++++L +C + A+ L +
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
PN + + LI L EA ++ G PD T+ T+ N LC+ ID
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMI 523
LL + + + Y+ + ALC V D + ++D R +Y +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKP 583
R A+RLL +M E+ ++ ++ + + L + M
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK-EGKLVEAEKLYDEMIKRSI 356
Query: 584 HCDIF--NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
DIF +S I+G ++ D A+ +FELM N + ++K + +++R+ + +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 642 FFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
F ++ + +V +T YN +I GL ++ D+A ++ +M+ G+ P I Y +L+ LC
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 701 SLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM 760
+ +A+ + +K S + P++Y
Sbjct: 477 KYGKLEKALVVFEYLQK----------------SKMEPDIY------------------T 502
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMC 819
++I +V L K ++ Y ++ + ++A LF M
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ G PN TY + G K + + EM GF +T +++
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 135/628 (21%), Positives = 252/628 (40%), Gaps = 56/628 (8%)
Query: 162 FRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGF-GYHILLNSLAENN 220
F + S+ +R + +++ K D A+ L G M Q L ++ LL+++A+
Sbjct: 40 FSAASYDYREKLSRNVLLDL----KLDDAVDLFGEM-VQSRPLPSIVEFNKLLSAIAK-- 92
Query: 221 CYNAFDVIAN-----QICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHR 275
N FD++ + Q Y+ + N I+I C++ +L A A L ++ G E
Sbjct: 93 -MNKFDLVISLGERMQNLRISYDLYSYN-ILINCFCRRSQLPLALAVLGKMMKLGYEPDI 150
Query: 276 SELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKR 335
LS L+ C R AV LV + F +
Sbjct: 151 VTLSSLLNGYCHGKRISEAVALVDQM----------------------------FVME-- 180
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
+ P V +N LI L N+ + L+ M P++ T V+ CK G +
Sbjct: 181 ----YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 396 DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
D+AL L + + + + Y +I LC +A + G P+ T+++L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA 515
LC + + LL +ER+ PN T+S + A + G++ + + ++ K +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 516 R---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
F+Y+ +I GF +R D A + M K +Y ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 573 NLLEMMTHGKPHCDI-FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
EM G + +N+ I G A D+A+++F+ M +G+ + + +++
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 632 RSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
+ ++ AL F + + ++ YN MI G+CK+ K + +L + G+ P++
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE 750
Y ++ C EA L ++ G S N L+ + + S ++
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 751 KEGEFL-DSSMLTLIIGAF-SGCLRVSY 776
+ F+ D+S ++++I G L SY
Sbjct: 597 RSCGFVGDASTISMVINMLHDGRLEKSY 624
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 164/758 (21%), Positives = 317/758 (41%), Gaps = 42/758 (5%)
Query: 105 RVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRP----LVFDFLR 160
R R +DGD+ L + P Y + + R +S + P LV +
Sbjct: 97 RPWRGSFEDGDVFWVLIHILVSS--PETYGRASDL--LIRYVSTSNPTPMASVLVSKLVD 152
Query: 161 DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN----SL 216
+S F +R + L+ Y+ + D A+ ++ +M L+LD + +N +L
Sbjct: 153 SAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPYVNRTLSAL 208
Query: 217 AENNCYNAFDVIANQICMRGYES-HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHR 275
+ N + +++ G + ++T ++++ ++ + EA L+ + G E
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 276 SELSFLIGVLCESNRFERAVELVSEFGTS---LPLENAYGVWIRGLVQGGRLDEALEFFR 332
S + C++ A L+ E +P + Y I V+ G +D+A+ +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL-K 327
Query: 333 QKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKL 392
+ S+G V LI + N L L M + PN VT + ++ +F K
Sbjct: 328 DEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKN 387
Query: 393 GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTF 452
G ++ ALE + GL+P+ +I +EA ++ S TG +
Sbjct: 388 GEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVC 446
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
+T+ + LC++ K DE +LL R PN +Y+ + CR ++ ++ ++ +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 513 VTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
+ ++Y+ +I G +++ A ++ M E+ Y+ +++ L + +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ-TS 565
Query: 570 RFFNLLEMMTHGK---PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
+ LL M K C +NS IDG + D A +E M NGI N + +
Sbjct: 566 KARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 627 MKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
M ++ R+ AL ++++++ V + Y +I G CK + A L E+L+ GL
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 686 NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR-----LTSFLGNVLLFHSMI-SPE 739
NPS Y L+ +L A++L K G R T+ + +L ++I + E
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 740 VYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN-L 798
+Y + G D + T+I+ S + ++ EE+ ++ YN +
Sbjct: 746 LYTEM-----QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAV 800
Query: 799 LMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHG 836
+ ++D+A L D M +G+ P+ T+ ++ G
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/536 (21%), Positives = 213/536 (39%), Gaps = 51/536 (9%)
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
N N +L + K D A+++ N + + P + + L EA +
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
G D T L A RE K E ++L A+ER P+S YS V A C+
Sbjct: 222 SRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKT 281
Query: 498 GRVE-DGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
+ L+R +K V ++ +Y +I+ +K D A RL EM G + +
Sbjct: 282 LDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVA 341
Query: 554 YRHVL--HCLLHMDNPRTRFFNLLEMMTH--GKPHCDIFNSFIDGAMHANKPDLAREVFE 609
++ HC +N L + M P+ F+ I+ + + A E ++
Sbjct: 342 ATSLITGHC---KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDK 669
M+ G+ + +++ + + ++ +AL+ F++ + + + N ++ LCK K
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEA-VNLVNVYEKAGRRLTSFLGN 728
D A EL +M G+ P++ Y ++ C K A + N+ EK G + ++ +
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTYS 517
Query: 729 VLL---------------FHSMISPE------VYHSCVD---------LRREKEGEFLDS 758
+L+ + M S VY + ++ RE ++
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Query: 759 SMLTL-------IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDK 810
L + II F + ++ EE+ ++ TY LM L ++ MD+
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637
Query: 811 ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
A E+ D M +G++ + YG + GF + A E+L++G NP + N
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 179/392 (45%), Gaps = 9/392 (2%)
Query: 231 QICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNR 290
++C G++ + N IVI LC+ R A + + ++ G E +S LI C+ NR
Sbjct: 96 EVCGIGHDLYSYN-IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 291 FERAVELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEALEFF-RQKRDSEGFVPCKVR 346
A++LVS E G P Y I G + G +++A+E F R +RD G V
Sbjct: 155 VFDAIDLVSKMEEMGFR-PDVVIYNTIIDGSCKIGLVNDAVELFDRMERD--GVRADAVT 211
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN L+ L R D L+ DM I PN++T AV+ F K G A++L+ +
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
+ + P+ Y LI LC G EA ++L G PD T++TL N C+ ++D
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGF 526
E L +R + ++ TY+ + +AGR + + +D +Y+ ++ G
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHC 585
+ R + A L M++ EL ++Y V+H + + N + + G KP
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+ + I G + D + ++ MQ +G++
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 165/381 (43%), Gaps = 48/381 (12%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G+ P V + LI + NR+ D +L+ M E P++V N ++ CK+G+V+ A
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ELF+ + G+ + + Y L+ LC G +A R++R P+ TF+ + +
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM------RGDLDK 512
+E K E L + R P+ TY+ ++ LC GRV++ M +G L
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
V +Y +I GF KS R D +L EM ++G +Y
Sbjct: 314 VV---TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY------------------ 352
Query: 573 NLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
N+ I G A +PD A+E+F M N + +++
Sbjct: 353 ----------------NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Query: 633 SRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
+ R+ AL F ++ + ++ + YN +I G+CK + A +L + GL P +
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 692 YEVLVQKLCSLKRYYEAVNLV 712
Y ++ C KR ++ +L+
Sbjct: 454 YTTMISGFCR-KRQWDKSDLL 473
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 185/420 (44%), Gaps = 16/420 (3%)
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
L+E ++ F + S +P V ++ ++ ++ + V L M I ++ + N
Sbjct: 50 LEEEIDLFCKMIQSRP-LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
V+ C+ +AL + +FG P+ + LI C +A ++
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G+ PD ++T+ + C+ +++ +L D ++ TY+ V+ LC +GR D
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 504 YLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH- 559
+ D+ D V ++ +I F+K + A +L EM + + +Y +++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 560 -CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
C+ + + +L M+T G P +N+ I+G + + D ++F M + G++
Sbjct: 289 LCMHGRVDEAKQMLDL--MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELC 677
+ + +++ YF++ R A F+ + + + T Y+ ++ GLC + + + AL L
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT--YSILLYGLCMNWRVEKALVLF 404
Query: 678 FEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
M K + I Y +++ +C + +A +L G + +V+ + +MIS
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK-----PDVVSYTTMIS 459
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 26/383 (6%)
Query: 488 SRFVSALCRAGRVED-GYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
SRFV AL G++ GY + D VT + +I GF + NR A L+ +M+E G
Sbjct: 118 SRFVIALSVVGKMMKFGY----EPDVVTV----SSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 547 YELKRSSYRHVL--HCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANK-PDL 603
+ Y ++ C + + N F+ +E + +NS + G + + D
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIV 662
AR + +++ R+ I+ N + V+ + + + S+A++ + ++ R V YN +I
Sbjct: 229 ARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
GLC + D A ++ M+ G P + Y L+ C KR E L E A R L
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR--EMAQRGL 345
Query: 723 TSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDS--SMLTLIIGAFSGCL--RVSYSI 778
+G+ + ++++I D +E +DS ++ T I + C+ RV ++
Sbjct: 346 ---VGDTITYNTIIQGYFQAGRPDAAQEIFSR-MDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 779 QELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGF 837
E + +DI TYN+++ + +++ A +LF + +GL+P+ +Y M GF
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 838 SNHGRKDEAKRWVHEMLKKGFNP 860
+ D++ +M + G P
Sbjct: 462 CRKRQWDKSDLLYRKMQEDGLLP 484
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 15/307 (4%)
Query: 572 FNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
+L M +P I F+ + + DL +F M+ GI + S +V+
Sbjct: 54 IDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINC 113
Query: 630 YFRSRRISDALRFFNDI-----RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
R R AL + VV + L N G C+ ++ A++L +M ++G
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN----GFCQGNRVFDAIDLVSKMEEMG 169
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSC 744
P + Y ++ C + +AV L + E+ G R + N L+ S +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR-WSDA 228
Query: 745 VDLRREKEGEFLDSSMLTL--IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK 802
L R+ + +++T +I F + S +++ EE+ +C D++TYN L+
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 803 LTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPP 861
L H +D+A ++ D M +G P+ TY + +GF R DE + EM ++G
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 862 ENTRNVI 868
T N I
Sbjct: 349 TITYNTI 355
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 193/427 (45%), Gaps = 32/427 (7%)
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
RTFST +++ ++E DL ++ R +P+ +S+ +S + ++ + +
Sbjct: 39 RTFSTKRSSM----NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHH 94
Query: 510 LDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
++ +SY +I + +R IA ++ +M + GYE + +++ +
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGN- 153
Query: 567 PRTRFFNLLEMMTHG-----KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNAS 621
R F+ +++++ +P I+N+ IDG+ + A E+F+ M+R+G+ +A
Sbjct: 154 ---RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 622 SQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEM 680
+ ++ S R SDA R D + +V + + +I K K A++L EM
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 681 LKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEV 740
+ ++P + Y L+ LC R EA ++++ G L +V+ ++++I+
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG-----CLPDVVTYNTLINGFC 325
Query: 741 YHSCVD----LRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIY 794
VD L RE + G D+ II + R + + + ++ +I
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIR 382
Query: 795 TYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEM 853
TY++L+ L + ++KA LF+ M + +E + TY ++ HG G ++A +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 854 LKKGFNP 860
KG P
Sbjct: 443 SCKGLKP 449
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 145/359 (40%), Gaps = 17/359 (4%)
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM 578
++K++ KS D+ L M+ G SY V++CL + +MM
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 579 THG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G +P +S I+G N+ A ++ M+ G + ++ + ++
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 638 DALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
DA+ F+ + R V YN ++ GLC S + A L +M+ + P++ + ++
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE------ 750
++ EA+ L YE+ RR +V ++S+I+ H VD ++
Sbjct: 252 DVFVKEGKFSEAMKL---YEEMTRRCVD--PDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-D 809
+G D +I F RV + E+ + D TYN +++ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 810 KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
A E+F RM R PN TY ++ +G + R ++A M K T N++
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 185 GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNV 244
GK A+ L M + +D D F Y+ L+N
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLING----------------------------- 288
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
LC GR++EA+ L+ +V G + LI C+S R + +L E
Sbjct: 289 -----LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 305 LPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKD 362
+ + Y I+G Q GR D A E F + DS P Y+IL+ L R++
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIF-SRMDSR---PNIRTYSILLYGLCMNWRVEK 399
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
L +M ++ I ++ T N V+ CK+G V+ A +LF S S GL P+ ++Y +I
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 423 TLC----WD 427
C WD
Sbjct: 460 GFCRKRQWD 468
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 239/558 (42%), Gaps = 39/558 (6%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
++ L Q + AL FF+ +S F + + ++I +L + ++ V LL M
Sbjct: 47 VKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG 106
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ +V+ + ++G+ + A+E+F +FG P+ Y +++ TL + + Y
Sbjct: 107 FHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIY 166
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
V R G+ P+ T++ L ALC+ K+D LL + P++ +Y+ +S++
Sbjct: 167 MVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 495 CRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSY 554
C G V++G + + V + Y +I G K + A L+ EM EKG SY
Sbjct: 227 CEVGLVKEGRELAERFEPVVS--VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 555 RHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
+++ L + F L +M+ G P+ +S + G A +++ M R
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 614 N-GIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKAD 671
G+ N + +++ + I A+ F+ + + + Y +I G K D
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 672 IALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL 731
A+ + +ML G P++ Y +V+ LC ++ EA +L+ + K + +V
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE-----NCAPSVPT 459
Query: 732 FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPV 791
F++ I D R E + M E +C P
Sbjct: 460 FNAFIK-----GLCDAGRLDWAEKVFRQM----------------------EQQHRC-PP 491
Query: 792 DIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWV 850
+I TYN L+ L + +++A L + RG+E + TY + HG N G A + V
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLV 551
Query: 851 HEMLKKGFNPPENTRNVI 868
+M+ G +P E T N+I
Sbjct: 552 GKMMVDGKSPDEITMNMI 569
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 247/590 (41%), Gaps = 18/590 (3%)
Query: 120 LKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVV 179
L FF F HT TF + R L+ V L+ + F +++
Sbjct: 60 LHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVIS 119
Query: 180 GYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYES 239
Y G + A+ + R++ G D Y+ +L++L N ++ + G+E
Sbjct: 120 VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEP 179
Query: 240 HM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
++ T +++K LCK +++ A+ L + G + +I +CE + EL
Sbjct: 180 NVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA 239
Query: 299 SEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
F P+ + Y I GL + A E R+ + +G P + Y+ LI L
Sbjct: 240 ERFE---PVVSVYNALINGLCKEHDYKGAFELMREMVE-KGISPNVISYSTLINVLCNSG 295
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVL--CFFCKLGMVDVALELFNSRSQ-FGLSPNYM 415
+++ + L M + PN+ T+++++ CF G AL+L+N + FGL PN +
Sbjct: 296 QIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL--RGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 416 AYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFA 475
AY L+ C G +A V G P+ RT+ +L N + +D + +
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 476 LERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRG 532
L PN Y+ V ALCR + ++ + + K + ++ I G + R
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 533 DIAARLLVEMKEKGY-ELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNS 590
D A ++ +M+++ +Y +L L + + E+ G + +N+
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 591 FIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI---R 647
+ G+ +A P +A ++ M +G + + +++ +Y + + A + + + R
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGR 593
Query: 648 HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
+ Y +I GLC+S+ + + L M+ G+ PSI + VL+
Sbjct: 594 RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 223/546 (40%), Gaps = 63/546 (11%)
Query: 225 FDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL--I 282
F IAN + + +T ++I+ L G+++ + L + G H SE F+ I
Sbjct: 63 FKSIANSNLFK--HTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG--FHCSEDLFISVI 118
Query: 283 GVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQ-KRDSE 338
V + ERAVE+ + EFG P Y + L+ R+ +R KRD
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCD-PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRD-- 175
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
GF P YN+L+ L + N++ +LL++M+ P+ V+ V+ C++G+V
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG 235
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
EL P Y LI LC + K A+ ++R G P+ ++STL N
Sbjct: 236 RELAER-----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED---------------- 502
LC +I+ + L L+R PN T S V G D
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350
Query: 503 ----------GYLMRGDLDKVTARFS-------------YAKMIMGFIKSNRGDIAARLL 539
G+ G++ K + FS Y +I GF K D A +
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMT--HGKPHCDIFNSFIDGAMH 597
+M G Y +++ L + +L+E+M+ + P FN+FI G
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFK-EAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 598 ANKPDLAREVFELM-QRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTK 655
A + D A +VF M Q++ N + ++ ++ RI +A +I V S+
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
YN ++ G C + IAL+L +M+ G +P +++ C + A ++++
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 716 EKAGRR 721
GRR
Sbjct: 590 -SCGRR 594
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 157/394 (39%), Gaps = 19/394 (4%)
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIK 248
A L+ M +G+ + Y L+N L + Q+ RG ++ T ++K
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 249 HLCKQGRLEEAEAHLNGLV-GSGKELHRSELSFLIGVLCESNRFERAVELVS---EFGTS 304
+G +A N ++ G G + + + L+ C +AV + S E G S
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 305 LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVY 364
P YG I G + G LD A+ + K + G P V Y ++ L R ++ K+
Sbjct: 385 -PNIRTYGSLINGFAKRGSLDGAV-YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS-RSQFGLSPNYMAYKYLILT 423
L+ M++ P++ T NA + C G +D A ++F Q PN + Y L+
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
L +EAY + R G T++TL + C L+ + P+
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR--------FSYAKMIMGFIKSNRGDIA 535
T + + A C+ G+ E M LD V+ SY +I G +SN +
Sbjct: 563 EITMNMIILAYCKQGKAERAAQM---LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDG 619
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
LL M G +++ +++C + D R
Sbjct: 620 VILLERMISAGIVPSIATWSVLINCFILDDIVRA 653
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 181/802 (22%), Positives = 314/802 (39%), Gaps = 144/802 (17%)
Query: 163 RSCSFPHRARYHDTLVVGYAIA-GKPDIALHLLGR-MRFQGLDLDGFGYHILLNSLAE-- 218
++ FP R D+L+ G++I P L +L +R G + L+ E
Sbjct: 90 KASIFP-RTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKG 148
Query: 219 --NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL-HR 275
+N +++ N+ +++ + + VI CK G+ E A V SG + +
Sbjct: 149 EMDNAIEVLEMMTNKNVNYPFDNFVCSA-VISGFCKIGKPELALGFFESAVDSGVLVPNL 207
Query: 276 SELSFLIGVLCESNRFERAVELVS-------EFGTSLPLENAYGVWIRGLVQGGRLDEAL 328
+ L+ LC+ + + +LV EF Y WI G +GG L +AL
Sbjct: 208 VTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF-----YSNWIHGYFKGGALVDAL 262
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
R+ + +G V Y+ILI L +E +++ LL M + + PN++T A++
Sbjct: 263 MQDREMVE-KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRG 321
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
CK+G ++ A LFN G+ + Y LI +C G A+ +L G P
Sbjct: 322 LCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPS 381
Query: 449 RRTFSTLANALCRECKIDEMWDL-----------------------LDFALE--RRF--- 480
T++T+ N LC ++ E ++ +D LE RRF
Sbjct: 382 ILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEA 441
Query: 481 -------------------------------MP------NSSTYSRFVSALCRAGRVEDG 503
MP +++TY+ + C+ G++E+
Sbjct: 442 KIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 504 YLMRGDLDK--VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
M +L K V+A Y ++I K D A +L+E+ EKG L + R +LH
Sbjct: 502 LEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS- 560
Query: 562 LHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAM----HANKPDLAREVFELMQRNGIM 617
+H + L+ + + + D+ ++ A+ + A EV+ +M+R G+
Sbjct: 561 IHANGGDKGILGLVYGLE--QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLT 618
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL--YNRMIVGLCKSDKADIALE 675
S IL K+ + R DA + + S + Y +I GLCK AL
Sbjct: 619 VTFPSTIL--KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALN 676
Query: 676 LCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM 735
LC G+ + Y L+ LC EA+ L + E G +
Sbjct: 677 LCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIG---------------L 721
Query: 736 ISPEVYHSCVDLRREKEGEFLDSSML-----------TLII-----------GAFSGCLR 773
+ EV + + KEG FLD+ L +II G +R
Sbjct: 722 VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMR 781
Query: 774 VSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGL 832
V +++ + P D +T + +++ DM++A +F + + + + +
Sbjct: 782 VVS-----RKMMGRVTP-DAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 833 MAHGFSNHGRKDEAKRWVHEML 854
+ GF GR +EA+ + EML
Sbjct: 836 LIKGFCTKGRMEEARGLLREML 857
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 3/212 (1%)
Query: 660 MIVGLCKSDKADIALELCFEMLKVG-LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKA 718
+I G CK K ++AL + G L P++ Y LV LC L + E +LV E
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 719 GRRLTS-FLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYS 777
G F N + + V D ++G D +++I S V +
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEA 296
Query: 778 IQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHG 836
+ L ++I + ++ TY ++R L +++A LF+R+ G+E + + Y + G
Sbjct: 297 LGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDG 356
Query: 837 FSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G + A + +M ++G P T N +
Sbjct: 357 ICRKGNLNRAFSMLGDMEQRGIQPSILTYNTV 388
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 148/618 (23%), Positives = 267/618 (43%), Gaps = 73/618 (11%)
Query: 266 LVGSGKELHRSELSFLIGVLCESNRFERAV--------ELVSEFGTSLPLENAYGVWIRG 317
+V SG L+R + ++ ++ E +R E+ + EL FG L Y +
Sbjct: 113 IVSSG--LYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRL----NYPCYSSL 166
Query: 318 LVQGGRLDEA-LEFFRQKR-DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD--MNET 373
L+ +LD L + +R +++GFV + Y ++ L + N + E+ M +
Sbjct: 167 LMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK-NGYTEAAEMFMSKILKIG 225
Query: 374 CIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS-QFGLSPNYMAYKYLILTLCWDGCPKE 432
+ + + + +L F L + D AL++F+ S + +PN ++Y LI LC G +E
Sbjct: 226 FVLDSHIGTSLLLGFCRGLNLRD-ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE 284
Query: 433 AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVS 492
A+ + G P RT++ L ALC ID+ ++L D + R PN TY+ +
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLID 344
Query: 493 ALCRAGRVED--GYLMRGDLDKV-TARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
LCR G++E+ G + D++ + +Y +I G+ K R A LL M+++
Sbjct: 345 GLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC-- 402
Query: 550 KRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFE 609
KP+ FN ++G KP A + +
Sbjct: 403 --------------------------------KPNVRTFNELMEGLCRVGKPYKAVHLLK 430
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN-----DIRHQVVVSTKLYNRMIVGL 664
M NG+ + S +++ R ++ A + + DI + T + N
Sbjct: 431 RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN----AF 486
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
CK KAD+A ML+ G++ L+ +C + + +A+ ++ K T
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 725 FLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDS--SMLTLIIGAF-SGCLRVSYSIQEL 781
NV+L +V L + + + S + TL+ G SG + S+ I EL
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 782 EELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNH 840
+L + C P ++Y Y +++ L +++A +L M G+ PN TY +M G+ N+
Sbjct: 607 MKL-SGCLP-NVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 841 GRKDEAKRWVHEMLKKGF 858
G+ D A V M+++G+
Sbjct: 665 GKLDRALETVRAMVERGY 682
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 138/596 (23%), Positives = 246/596 (41%), Gaps = 80/596 (13%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
VFD + +C+ P+ Y L+ G G+ + A L +M +G Y +L+
Sbjct: 252 VFDVMSKEVTCA-PNSVSY-SILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 215 SLAE----NNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGS 269
+L + + +N FD ++ RG + ++ T ++I LC+ G++EEA +V
Sbjct: 310 ALCDRGLIDKAFNLFD----EMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 270 GKELHRSELSF--LIGVLCESNRFERAVEL--VSEFGTSLPLENAYGVWIRGLVQGGRLD 325
+ S +++ LI C+ R A EL V E P + + GL + G+
Sbjct: 366 --RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423
Query: 326 EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAV 385
+A+ ++ D+ G P V YN+LI L RE + Y+LL MN I P+ +T A+
Sbjct: 424 KAVHLLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 386 LCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRS------ 439
+ FCK G DVA + G+S + + LI +C G ++A +L +
Sbjct: 483 INAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Query: 440 --------------SSGT---------------GYFPDRRTFSTLANALCRECKIDEMWD 470
S G G P T++TL + L R I +
Sbjct: 543 LTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFR 602
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDG-YLMRGDLDKVTA--RFSYAKMIMGFI 527
+L+ +PN Y+ ++ LC+ GRVE+ L+ D + +Y M+ G++
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYV 662
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL----HMDNPRTRFFNLLEMMTHGKP 583
+ + D A + M E+GYEL Y +L + +DN
Sbjct: 663 NNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE-------------- 708
Query: 584 HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
++ D A+ P+ E+ ++++ G + LV + + R ++
Sbjct: 709 -----STVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR-LCKEGRTDESNDLV 762
Query: 644 NDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
++ + V K + ++ C K +EL +LK G PS + + +++Q L
Sbjct: 763 QNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGL 818
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 144/622 (23%), Positives = 235/622 (37%), Gaps = 108/622 (17%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL 305
++ LCK G E AE ++ ++ G L S GTSL
Sbjct: 201 IVNALCKNGYTEAAEMFMSKILKIGFVLD------------------------SHIGTSL 236
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
L G +G L +AL+ F P V Y+ILI L RL++ +
Sbjct: 237 LL---------GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
L M E P+ T ++ C G++D A LF+ G PN Y LI LC
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
DG +EA V R FP T++ L N C++ ++ ++LL +R PN
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 486 TYSRFVSALCRAGRVEDG-YLMRGDLDKVTAR--FSYAKMIMGFIKSNRGDIAARLLVEM 542
T++ + LCR G+ +L++ LD + SY +I G + + A +LL M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 543 KEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPD 602
+C F++ +P C F + I+ K D
Sbjct: 468 ----------------NC-----------FDI-------EPDCLTFTAIINAFCKQGKAD 493
Query: 603 LAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMI 661
+A LM R GI + + ++ + + DAL ++ +++ + N ++
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
L K K L + ++ K+GL PS+ Y LV L ++G
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI----------------RSGDI 597
Query: 722 LTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQEL 781
SF L+ S P VY T+II RV + + L
Sbjct: 598 TGSFRILELMKLSGCLPNVYP------------------YTIIINGLCQFGRVEEAEKLL 639
Query: 782 EELIAKCFPVDIYTYNLLMRK-LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGF--S 838
+ + TY ++++ + + +D+A E M +RG E N Y + GF S
Sbjct: 640 SAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLS 699
Query: 839 NHGRKDEAKRWVHEMLKKGFNP 860
G + + V ++ + +P
Sbjct: 700 QKGIDNSEESTVSDIALRETDP 721
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 168/768 (21%), Positives = 314/768 (40%), Gaps = 49/768 (6%)
Query: 124 DWAGRQPRFYHTRTTFVAIFRI-LSCARLRPLVFDFLRDFRS-CSFP--HRARYHDTLVV 179
D A + R Y + F +FR+ LSC RL + R + C+F +R ++L+
Sbjct: 48 DLAPIKTRVY--VSLFHTLFRLYLSCERL----YGAARTLSAMCTFGVVPDSRLWNSLIH 101
Query: 180 GYAIAGKPDIALHLL-GRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQICMRGY 237
+ + G + L+ +M G+ D F ++L++S + + A ++ N++
Sbjct: 102 QFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDT 161
Query: 238 ESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVEL 297
++ T VI LC+ G +EA L+ +V G + LI C+ F RA L
Sbjct: 162 VTYNT---VISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL 218
Query: 298 VSEFGT------SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
V E ++ L + Y + A+E + GF P V ++ +I
Sbjct: 219 VDEISELNLITHTILLSSYYNL------------HAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
RL + ++ + LL +M E + PN VT ++ K + AL L++ G+
Sbjct: 267 NRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIP 326
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
+ + Y L+ L G +EA + + P+ T++ L + LC+ + +
Sbjct: 327 VDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFI 386
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAGRVEDGY-LMRG--DLDKVTARFSYAKMIMGFIK 528
+ LE+ +PN TYS ++ + G +E+ L+R D + V F+Y +I G K
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446
Query: 529 SNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI- 587
+ + ++A L EM+ G E +++ L + + + +M++ G I
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR 647
+ S ID + A E MQ G+ + S +++ + ++ +
Sbjct: 507 YTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMRE 566
Query: 648 HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYE 707
+ +N M+ K ++ L+L +M G+ PS+ ++V LC + E
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 708 AVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD-LRREKE-----GEFLDSSML 761
A++++N L N+ + + H D + + E G L +
Sbjct: 627 AIHILN-----QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 762 TLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK-LTHHDMDKACELFDRMCQ 820
+I + + ++ A+ F D T+N LM + KA + M +
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 821 RGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G+ PN TY + G S+ G E +W+ EM +G P + T N +
Sbjct: 742 AGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL 789
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 13/337 (3%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFD 226
P ++ L+ G GK G MR +G++ D ++I++NS +
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 227 VIANQICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ +++ G + S M+ IV+ LC+ G++EEA LN ++ E+H + ++ I L
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML--MEIHPNLTTYRI-FL 650
Query: 286 CESNRFERAV------ELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
S++ +RA E + +G L Y I L + G +A ++ G
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLS-RQVYNTLIATLCKLGMTKKA-AMVMGDMEARG 708
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
F+P V +N L+ + ++ M E I PN+ T N ++ G++
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ + G+ P+ Y LI G K + + G P T++ L +
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
K+ + +LL +R PN+STY +S LC+
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 225/529 (42%), Gaps = 27/529 (5%)
Query: 135 TRTTFVAIFRILSC---ARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIAL 191
T FV++ +L C R F L F H+ L+ G + A+
Sbjct: 103 TFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAV 162
Query: 192 HLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE-SHMTNVIVIKHL 250
LL MR L D F Y+ ++ E +AN++ G S +T I+I
Sbjct: 163 SLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAF 222
Query: 251 CKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVEL---VSEFGTSLPL 307
CK G+++EA L + G E + LI C+ +R L V E G S P
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-PC 281
Query: 308 ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
Y IRG + G+L EA E F + G P Y LI L + K+ +LL
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
M E PN VT N ++ CK G+V A+E+ + P+ + Y L+ LC
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 428 GCPKEA----YRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
G EA Y +L+ SS T PD +++ L + LC+E ++ + D+ D +E+ +
Sbjct: 401 GDLDEASKLLYLMLKDSSYTD--PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 484 SSTYSRFVSALCRAGRVEDG---YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLV 540
T + +++ +AG V + D V +Y MI GF K+ ++A LL
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 541 EMKEKGYELKRSSYRHVLHCLLH---MDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGA 595
+M+ EL+ S + + +CLL + + + L E M D+ FN IDG+
Sbjct: 519 KMRVS--ELQPSVFDY--NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 596 MHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN 644
+ A A + M R G+ + + ++ + + + +A+ FF+
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 139/586 (23%), Positives = 243/586 (41%), Gaps = 76/586 (12%)
Query: 279 SFLIGVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
+ L+ LC + +AV L+ E + +P +Y IRG +G L++ALE + +
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
S G V + ILI + ++ + L +M + ++V +++ FC G +D
Sbjct: 206 S-GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
LF+ + G SP + Y LI C G KEA + G P+ T++ L
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
+ LC K E LL+ +E+ PN+ TY+ ++ LC+ G V D + + K R
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
+Y ++ G D A++LL M LK SSY
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLM------LKDSSYTD----------------- 421
Query: 574 LLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELM-QRNGIMTNASSQILVMKSYFR 632
P +N+ I G N+ A ++++L+ ++ G ++ IL + S +
Sbjct: 422 ---------PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNIL-LNSTLK 471
Query: 633 SRRISDALRFFNDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
+ ++ A+ + I ++V ++ Y MI G CK+ ++A L +M L PS+
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 692 YEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREK 751
Y L+ LC +A L +E+ R + +V+ F+ MI + K
Sbjct: 532 YNCLLSSLCKEGSLDQAWRL---FEEMQR--DNNFPDVVSFNIMIDGSL----------K 576
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN-LLMRKLTHHDMDK 810
G+ S +L++G L D++TY+ L+ R L +D+
Sbjct: 577 AGDI--KSAESLLVGMSRAGL-----------------SPDLFTYSKLINRFLKLGYLDE 617
Query: 811 ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
A FD+M G EP+ + + G D+ V +++ K
Sbjct: 618 AISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 237/547 (43%), Gaps = 45/547 (8%)
Query: 202 LDLDGFGYHILLNSLAENNCYN-------AFDVIANQICMRGYESHMTN-VIVIKHLCKQ 253
L+ D F + L+ L E CY AF V+A + RG+ ++ N I++K LC+
Sbjct: 99 LETDTFINFVSLSGLLE--CYVQMRKTGFAFGVLALML-KRGFAFNVYNHNILLKGLCRN 155
Query: 254 GRLEEAEAHLNGLVGSGKELHRSEL-------SFLIGVLCESNRFERAVELVSEF---GT 303
+A + L +E+ R+ L + +I CE E+A+EL +E G
Sbjct: 156 LECGKAVSLL-------REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
S L +G+ I + G++DEA+ F ++ + G V Y LI L
Sbjct: 209 SWSLV-TWGILIDAFCKAGKMDEAMGFLKEMK-FMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
L ++ E P +T N ++ FCKLG + A E+F + G+ PN Y LI
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
LC G KEA ++L P+ T++ + N LC++ + + ++++ +RR P+
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 484 SSTYSRFVSALCRAGRVEDG----YLMRGDLDKVTAR-FSYAKMIMGFIKSNRGDIAARL 538
+ TY+ + LC G +++ YLM D SY +I G K NR A +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK--PHCDIFNSFIDGAM 596
+ EK R + +L+ L + + L + ++ K + D + + IDG
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDV-NKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQV----VV 652
++A+ + M+ + + + ++ S + + A R F +++ VV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
S +N MI G K+ A L M + GL+P + Y L+ + L EA++
Sbjct: 566 S---FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 713 NVYEKAG 719
+ +G
Sbjct: 623 DKMVDSG 629
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 173/417 (41%), Gaps = 48/417 (11%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG 236
L+ + AGK D A+ L M+F GL+ D Y L+ + + + +++ RG
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 237 YES-HMTNVIVIKHLCKQGRLEEAE-------------------AHLNGLVGSGKELHRS 276
+T +I+ CK G+L+EA ++GL G GK
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 277 EL----------------SFLIGVLCESNRFERAVELVSEFGT--SLPLENAYGVWIRGL 318
+L + +I LC+ AVE+V + P Y + + GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 319 VQGGRLDEALE-FFRQKRDSEGFVPCKVRYNILIGRLLRENRLK---DVYELLMDMNETC 374
G LDEA + + +DS P + YN LI L +ENRL D+Y+LL+ E
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV---EKL 454
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ VT N +L K G V+ A+EL+ S + N Y +I C G A
Sbjct: 455 GAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAK 514
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
+L + P ++ L ++LC+E +D+ W L + P+ +++ +
Sbjct: 515 GLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS 574
Query: 495 CRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
+AG ++ + + + F+Y+K+I F+K D A +M + G+E
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 118/554 (21%), Positives = 236/554 (42%), Gaps = 25/554 (4%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+L A+ F+Q DS + N L+ +L+R + + M ET N V++
Sbjct: 53 QLKNAVSVFQQAVDSGSSLA--FAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSL 110
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
+ +L + ++ A + + G + N + L+ LC + +A +LR
Sbjct: 111 SGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRR 170
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
PD +++T+ C ++++ +L + + T+ + A C+AG++++
Sbjct: 171 NSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 503 --GYLMRGDLDKVTARFS-YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
G+L + A Y +I GF D L E+ E+G +Y ++
Sbjct: 231 AMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 560 --CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI 616
C L + F M+ G +P+ + IDG K A ++ LM
Sbjct: 291 GFCKLGQLKEASEIFEF--MIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALE 675
NA + +++ + ++DA+ ++ + + YN ++ GLC D A +
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 676 LCFEMLKVG--LNPSIECYEVLVQKLCSLKRYYEAVNLVNV-YEK--AGRRLTSFLGNVL 730
L + MLK +P + Y L+ LC R ++A+++ ++ EK AG R+T+ N+L
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT---NIL 465
Query: 731 LFHSMISPEVYHSCVDLRREKEGEFL-DSSMLTLIIGAF--SGCLRVSYSIQELEELIAK 787
L ++ + +V + ++ + + + +S T +I F +G L V+ + L ++
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL--LCKMRVS 523
Query: 788 CFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
++ YN L+ L +D+A LF+ M + P+ ++ +M G G A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 847 KRWVHEMLKKGFNP 860
+ + M + G +P
Sbjct: 584 ESLLVGMSRAGLSP 597
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 139/315 (44%), Gaps = 10/315 (3%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQICMR 235
L+ G GK AL LL M + + + Y+I++N L ++ +A +++ R
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 236 GYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFER 293
++T I++ LC +G L+EA L ++ +S+ LI LC+ NR +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442
Query: 294 AVE----LVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
A++ LV + G + + + ++ G +++A+E ++Q DS+ V Y
Sbjct: 443 ALDIYDLLVEKLGAGDRV--TTNILLNSTLKAGDVNKAMELWKQISDSK-IVRNSDTYTA 499
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
+I + L LL M + + P++ N +L CK G +D A LF +
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
P+ +++ +I G K A +L S G PD T+S L N + +DE
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 470 DLLDFALERRFMPNS 484
D ++ F P++
Sbjct: 620 SFFDKMVDSGFEPDA 634
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 44/275 (16%)
Query: 600 KPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YN 658
K A V LM + G N + +++K R+ A+ ++R ++ YN
Sbjct: 122 KTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYN 181
Query: 659 RMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKA 718
+I G C+ + + ALEL EM G + S+ + +L+ C + EA+ +
Sbjct: 182 TVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL------ 235
Query: 719 GRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFL----DSSMLTLIIGAFSGCLRV 774
KE +F+ D + T +I F C +
Sbjct: 236 --------------------------------KEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLM 833
+E++ + TYN L+R + +A E+F+ M +RG+ PN +TY +
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 834 AHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G G+ EA + ++ M++K P T N+I
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 225/574 (39%), Gaps = 97/574 (16%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
+ L+ A K D+ + L +M+ G+ + + Y+IL+ NC+
Sbjct: 14 NKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI------NCF------------ 55
Query: 235 RGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
C++ ++ A A L ++ G E LS L+ C R A
Sbjct: 56 ----------------CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 295 VELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
V LV E G P + I GL + EA+ + G P V Y +++
Sbjct: 100 VALVDQMVEMGYR-PDTITFTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVV 157
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
L + + + LL M I ++V N ++ CK VD AL LF G+
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
PN + Y LI LC G +A ++L P+ TF+ L +A +E K E L
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM---------RGDLDKVTARFSYAKM 522
D ++R P+ TY+ ++ C R++ M DLD +Y +
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD------TYNTL 331
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH---MDNPRTRFFNLLEMMT 579
I GF KS R + L EM +G +Y ++ L H DN + F +M++
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF---KQMVS 388
Query: 580 HGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G P DI ++ +DG + K + A EVF+ MQ++
Sbjct: 389 DGVPP-DIMTYSILLDGLCNNGKLEKALEVFDYMQKS----------------------- 424
Query: 638 DALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
++ + +Y MI G+CK+ K D +L + G+ P++ Y ++
Sbjct: 425 -----------EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Query: 698 KLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL 731
LCS + EA L+ ++ G S N L+
Sbjct: 474 GLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 123/554 (22%), Positives = 217/554 (39%), Gaps = 75/554 (13%)
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
+P +N L+ + + + V L M I N+ T N ++ FC+ + +AL
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
L + G P+ + L+ C +A ++ GY PD TF+TL + L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 461 RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY--LMRGDLDKVTARFS 518
K E L+D ++R PN TY V+ LC+ G ++ + L + + K+ A
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 519 -YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD------------ 565
+ +I K D A L EM+ KG +Y ++ CL
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 566 -----NPRTRFFNLL--EMMTHGK-----------------PHCDIFNSFIDGAMHANKP 601
NP FN L + GK P +NS I+G ++
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVS-TKLYNRM 660
D A+++FE M + + ++K + +S+R+ D F ++ H+ +V T Y +
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
I GL D A ++ +M+ G+ P I Y +L+ LC+ + +A+ + + +K+
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 721 RLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE 780
+L ++ ++ +MI VD +G L S
Sbjct: 427 KL-----DIYIYTTMIEGMCKAGKVD-----DGWDLFCS--------------------- 455
Query: 781 LEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSN 839
L K ++ TYN ++ L + + +A L +M + G P+ TY +
Sbjct: 456 ---LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 840 HGRKDEAKRWVHEM 853
G K + + EM
Sbjct: 513 DGDKAASAELIREM 526
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 12/360 (3%)
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
++Y +I F + ++ +A LL +M + GYE + +L+ H + +
Sbjct: 46 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 577 MMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRR 635
M+ G +P F + I G NK A + + M + G N + +V+ +
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 636 ISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEV 694
I A N + ++ ++N +I LCK D AL L EM G+ P++ Y
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 695 LVQKLCSLKRYYEAVNLVN--VYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKE 752
L+ LCS R+ +A L++ + +K L +F L + + + L +
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA---LIDAFVKEGKFVEAEKLHDDMI 282
Query: 753 GEFLDSSMLTL--IIGAFSGCLRVSYSIQELEELIAK-CFPVDIYTYNLLMRKLTHHD-M 808
+D + T +I F R+ + Q E +++K CFP D+ TYN L++ +
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP-DLDTYNTLIKGFCKSKRV 341
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ ELF M RGL + TY + G + G D A++ +M+ G P T +++
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 128/544 (23%), Positives = 216/544 (39%), Gaps = 49/544 (9%)
Query: 199 FQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM----------------- 241
F GL DG+ + N+L A D+ + R + S +
Sbjct: 24 FSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83
Query: 242 ------------------TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIG 283
T I+I LC++ +L A A L ++ G L+ L+
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLN 143
Query: 284 VLCESNRFERAVELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGF 340
C NR AV LV E G P + + GL Q + EA+ ++ +G
Sbjct: 144 GFCHGNRISEAVALVDQMVEMGYQ-PDTVTFTTLVHGLFQHNKASEAVALV-ERMVVKGC 201
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
P V Y +I L + LL M + I ++V + V+ CK VD AL
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
LF G+ P+ Y LI LC G +A R+L P+ TF++L +A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 461 RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG---YLMRGDLDKVTARF 517
+E K+ E L D ++R PN TY+ ++ C R+++ + + D +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHM---DNPRTRFFNL 574
+Y +I GF K+ + L +M +G +Y ++H DN + F +
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 575 LEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
+ H P+ +N+ +DG K + A VFE +Q++ + + + ++ + ++
Sbjct: 442 VSDGVH--PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 635 RISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
++ D F + + V + YN MI G CK + A L +M + G P Y
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Query: 694 VLVQ 697
L++
Sbjct: 560 TLIR 563
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 121/552 (21%), Positives = 218/552 (39%), Gaps = 41/552 (7%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+LDEA++ F + S F P V ++ L+ + + + V M + N+ T
Sbjct: 45 KLDEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N ++ C+ + AL + + G P+ + L+ C EA ++
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
GY PD TF+TL + L + K E L++ + + P+ TY ++ LC+ G +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 503 GYLMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
+ ++K Y+ +I K D A L EM KG +Y ++
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 560 CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT 618
CL + L +M+ P+ FNS ID K A ++F+ M + I
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 619 NASSQILVMKSYFRSRRISDALRFFN-DIRHQVVVSTKLYNRMIVGLCKSDKADIALELC 677
N + ++ + R+ +A + F + + YN +I G CK+ K +EL
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 678 FEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
+M + GL + Y L+ +++A + N ++F M+S
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHG------FFQASDCDNAQ--------------MVFKQMVS 443
Query: 738 PEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
V+ + + TL+ G ++ ++ E L DIYTYN
Sbjct: 444 DGVHPNIMTYN-------------TLLDGLCKNG-KLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 798 LLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
++ + ++ +LF + +G++P+ Y M GF G K+EA +M +
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 857 GFNPPENTRNVI 868
G P T N +
Sbjct: 550 GPLPDSGTYNTL 561
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 165/404 (40%), Gaps = 73/404 (18%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE----NNCYNAFDVIA 229
+ ++ G G+PD+AL+LL +M ++ D Y +++SL + ++ N F +
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 230 NQ---------------ICMRGYESHMT-------------NVI----VIKHLCKQGRLE 257
N+ +C G S + NV+ +I K+G+L
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 258 EAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWI 315
EAE + ++ + + + LI C +R + A ++ + + LP Y I
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 316 RGLVQGGRLDEALEFFR----------------------QKRD------------SEGFV 341
G + ++ + +E FR Q D S+G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P + YN L+ L + +L+ + + ++ + P++ T N + CK G V+ +L
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
F S S G+ P+ +AY +I C G +EAY + G PD T++TL A R
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL 505
+ +L+ RF ++STY V+ + GR++ G+L
Sbjct: 568 DGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRLDKGFL 610
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 48/390 (12%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G+ P V + L+ NR+ D + L++ M ++ PN+V N ++ CK G +++A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
LEL N + GL + + Y L+ LC+ G +A R+LR PD TF+ L +
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR-- 516
++ +DE +L ++ PN+ TY+ ++ LC GR+ D + D + ++
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA---KKTFDLMASKGC 312
Query: 517 ----FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+Y +I GF K D +L M +G+
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF------------------------- 347
Query: 573 NLLEMMTHGKPHCDIF--NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
+ DIF N+ I G K +A ++F M + + + +++
Sbjct: 348 -----------NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 631 FRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
+ I AL F+D+R + + YN MI GLCK+DK + A EL + G+ P
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
Y +++ LC EA L+ ++ G
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 161/386 (41%), Gaps = 49/386 (12%)
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
+S+ +I F + +R A +L +M + GYE ++ +LH ++ F ++
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 577 MMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRR 635
M+ G +P+ ++N+ IDG + ++A E+ M++ G+ + + ++ S R
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 636 ISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEV 694
SDA R D+ + + + +I K D A EL EM++ ++P+ Y
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 695 LVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD------LR 748
++ LC R Y+A ++ G NV+ ++++IS VD R
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKG-----CFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 749 REKEGEFLDSSMLTLIIGAFS--GCLRVSYSI-------QELEELIAKCFP--------- 790
EG D +I + G LRV+ I + ++I C
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401
Query: 791 -----------------VDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGL 832
+ I YN+++ L D ++KA ELF R+ G++P+ TY +
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 833 MAHGFSNHGRKDEAKRWVHEMLKKGF 858
M G +G + EA + M ++G
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEGI 487
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 135/337 (40%), Gaps = 38/337 (11%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ G G+ +IAL LL M +GL D Y+ LL
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG------------------ 220
Query: 234 MRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
LC GR +A L ++ + LI V + +
Sbjct: 221 ----------------LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 294 AVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A EL E S P Y I GL GRL +A + F S+G P V YN LI
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLI 323
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ + + +L M+ ++ T N ++ +C++G + VAL++F ++
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
P+ + + L+ LC +G + A + + ++ + + LC+ K+++ W+L
Sbjct: 384 PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAG-RVEDGYLMR 507
P++ TY+ + LC+ G R E L+R
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIR 480
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 18/228 (7%)
Query: 652 VSTKLYNRMIV--GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAV 709
+S LY+ I+ C+ + AL + +M+K+G PSI + L+ C + R +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 710 NLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHS----CVDLRREKEGEFLDSSMLT--- 762
+LV + K+G + NV++++++I + ++L E E + L + ++T
Sbjct: 162 SLVILMVKSG-----YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 763 LIIG-AFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQ 820
L+ G +SG R S + + L +++ + D+ T+ L+ ++D+A EL+ M Q
Sbjct: 217 LLTGLCYSG--RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 821 RGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
++PN TY + +G HGR +AK+ M KG P T N +
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
+YN +I GLCK+ + +IALEL EM K GL + Y L+ LC R+ +A ++
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 716 EKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVS 775
K S +V+ F ++I V +D +E E + SS+
Sbjct: 238 MK-----RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV--------------- 277
Query: 776 YSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMA 834
P ++ TYN ++ L H + A + FD M +G PN TY +
Sbjct: 278 -------------DPNNV-TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 835 HGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
GF DE + M +GFN T N +
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
FD + + C FP+ Y +TL+ G+ D + L RM +G + D F Y+ L++
Sbjct: 303 TFDLMAS-KGC-FPNVVTY-NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 215 SLAE-NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
+ A D+ + R +T+ I++ LC G +E A + + S K +
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 274 HRSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN------AYGVWIRGLVQGGRLDEA 327
+ +I LC++++ E+A EL LP+E Y + I GL + G EA
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCR----LPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 328 LEFFRQKRDSEGFV 341
E R+ ++ EG +
Sbjct: 476 DELIRRMKE-EGII 488
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 191/442 (43%), Gaps = 47/442 (10%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
LI C+ NR + A ++ + P Y + I L G+LD AL+ Q S+
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL-SD 222
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
P + Y ILI + E + + +L+ +M + P+M T N ++ CK GMVD A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
E+ + G P+ ++Y L+ L G +E +++ P+ T+S L
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE------DGYLMRGDLDK 512
LCR+ KI+E +LL E+ P++ +Y ++A CR GR++ + + G L
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+ +Y ++ K+ + D A + ++ E G SSY + L +
Sbjct: 403 IV---NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 573 NLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
+LEMM++G P +NS I + R G++ A ++ M+S
Sbjct: 460 MILEMMSNGIDPDEITYNSMI----------------SCLCREGMVDEAFELLVDMRS-- 501
Query: 632 RSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
F H VV+ YN +++G CK+ + + A+ + M+ G P+
Sbjct: 502 --------CEF-----HPSVVT---YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 692 YEVLVQKLCSLKRYYEAVNLVN 713
Y VL++ + EA+ L N
Sbjct: 546 YTVLIEGIGFAGYRAEAMELAN 567
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 185/388 (47%), Gaps = 9/388 (2%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++ L+ G+ + D A +L RMR + D Y+I++ SL + + NQ+
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 234 MRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+ + +T I+I+ +G ++EA ++ ++ G + + +I +C+ +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 293 RAVELVS--EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
RA E+V E P +Y + +R L+ G+ +E E K SE P V Y+IL
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG-EKLMTKMFSEKCDPNVVTYSIL 339
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I L R+ ++++ LL M E + P+ + + ++ FC+ G +DVA+E + G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC-KIDEMW 469
P+ + Y ++ TLC +G +A + G P+ +++T+ +AL KI +
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAKMIMGF 526
+L+ + P+ TY+ +S LCR G V++ + + D+ + +Y +++GF
Sbjct: 460 MILEM-MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSY 554
K++R + A +L M G ++Y
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTY 546
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 154/348 (44%), Gaps = 4/348 (1%)
Query: 159 LRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE 218
L RS F ++ ++ GK D+AL +L ++ Y IL+ +
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240
Query: 219 NNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSE 277
+ + +++ RG + M T +I+ +CK+G ++ A + L G E
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 278 LSFLIGVLCESNRFERAVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQKR 335
+ L+ L ++E +L+++ + P Y + I L + G+++EA+ + +
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
+ +G P Y+ LI RE RL E L M P++V N VL CK G
Sbjct: 361 E-KGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 396 DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
D ALE+F + G SPN +Y + L G A ++ G PD T++++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+ LCRE +DE ++LL F P+ TY+ + C+A R+ED
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 180/421 (42%), Gaps = 7/421 (1%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF--GT 303
+I CK R+++A L+ + + +IG LC + + A++++++
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P Y + I + G +DEAL+ + S G P YN +I + +E +
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEML-SRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+E++ ++ P++++ N +L G + +L PN + Y LI T
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
LC DG +EA +L+ G PD ++ L A CRE ++D + L+ + +P+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGFIKSNRGDIAARLLV 540
Y+ ++ LC+ G+ + + G L +V SY M S A +++
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 541 EMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMT-HGKPHCDIFNSFIDGAMHAN 599
EM G + +Y ++ CL F L++M + P +N + G A+
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 600 KPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNR 659
+ + A V E M NG N ++ ++++ + ++A+ ND+ +S + R
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR 582
Query: 660 M 660
+
Sbjct: 583 L 583
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 172/407 (42%), Gaps = 21/407 (5%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+R + + R+ E LE F Q P YN LI + NR+ D +L M
Sbjct: 137 LRNIPKAVRVMEILEKFGQ--------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
P+ VT N ++ C G +D+AL++ N P + Y LI +G EA
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
+++ G PD T++T+ +C+E +D ++++ + P+ +Y+ + AL
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 495 CRAGRVEDG-------YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
G+ E+G + + D + VT Y+ +I + + + A LL MKEKG
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVT----YSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 548 ELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLARE 606
SY ++ L M++ G P +N+ + K D A E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLC 665
+F + G N+SS + + + S AL ++ + ++ YN MI LC
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
+ D A EL +M +PS+ Y +++ C R +A+N++
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 144/355 (40%), Gaps = 41/355 (11%)
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
F+Y +I GF K NR D A R+L M+ K +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDF----------------------------- 189
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
P +N I K DLA +V + + + +++++ +
Sbjct: 190 -----SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 637 SDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+AL+ +++ + + YN +I G+CK D A E+ + G P + Y +L
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 696 VQKLCSLKRYYEAVNLVN--VYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEG 753
++ L + ++ E L+ EK + ++ + E + + L +EK G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-G 363
Query: 754 EFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK-CFPVDIYTYNLLMRKLTHH-DMDKA 811
D+ +I AF R+ +I+ LE +I+ C P DI YN ++ L + D+A
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP-DIVNYNTVLATLCKNGKADQA 422
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
E+F ++ + G PN +Y M + G K A + EM+ G +P E T N
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/500 (20%), Positives = 187/500 (37%), Gaps = 80/500 (16%)
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
P+++ ++ F L + A+ + +FG P+ AY LI C +A RV
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
L + PD T++ + +LC K+D +L+ L P TY+ + A
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240
Query: 497 AGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELK 550
G V++ + +D++ +R F+Y +I G K D A ++ ++ KG E
Sbjct: 241 EGGVDEALKL---MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPD 297
Query: 551 RSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFE 609
SY +L LL+ + +M + P+ ++ I K + A + +
Sbjct: 298 VISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLK 357
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDK 669
LM+ G+ +A S Y+ +I C+ +
Sbjct: 358 LMKEKGLTPDAYS----------------------------------YDPLIAAFCREGR 383
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
D+A+E M+ G P I Y ++ LC + +A+ + + G
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG---------- 433
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF 789
SP SS T+ +S ++ ++ + E+++
Sbjct: 434 ------CSPN-----------------SSSYNTMFSALWSSGDKIR-ALHMILEMMSNGI 469
Query: 790 PVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
D TYN ++ L M D+A EL M P+ TY ++ GF R ++A
Sbjct: 470 DPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIN 529
Query: 849 WVHEMLKKGFNPPENTRNVI 868
+ M+ G P E T V+
Sbjct: 530 VLESMVGNGCRPNETTYTVL 549
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
C+S +L L M++ G NP + L++ +L+ +AV ++ + EK G+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP--- 156
Query: 725 FLGNVLLFHSMISPEVYHSCVD-----LRREKEGEFL-DSSMLTLIIGAFSGCLRVSYSI 778
+V ++++I+ + +D L R + +F D+ ++IG+ ++ ++
Sbjct: 157 ---DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 779 QELEELIA-KCFPVDIYTYNLLMR-KLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHG 836
+ L +L++ C P + TY +L+ + +D+A +L D M RGL+P+ +TY + G
Sbjct: 214 KVLNQLLSDNCQPT-VITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 837 FSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G D A V + KG P + N++
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 178/409 (43%), Gaps = 52/409 (12%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
GF P V + LI NR+++ ++ M E I P++V ++ CK G V+ A
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
L LF+ +G+ P+ + Y L+ LC G ++A +LR + PD TF+ L +A
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG----YLM--RGDLDK 512
+E K + +L + + PN TY+ ++ C G V++ YLM +G
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
V A Y +I GF K + D A ++ EM +KG +Y
Sbjct: 317 VVA---YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY------------------ 355
Query: 573 NLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
+ I G KP++A+EVF M G+ N + +++
Sbjct: 356 ----------------TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 633 SRRISDALRFFNDIRHQ----VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ ++ AL F D++ + V + YN ++ GLC + K + AL + +M K ++
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
I Y +++Q +C + AVNL G + NV+ + +MIS
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK-----PNVVTYTTMIS 503
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 193/466 (41%), Gaps = 51/466 (10%)
Query: 212 LLNSLAENNCYNAFDVIAN-----QICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGL 266
LLN +A+ FDV+ N QI ++ + N++ + C+ + A + L +
Sbjct: 78 LLNVIAK---MKKFDVVINLCDHLQIMGVSHDLYTCNLL-MNCFCQSSQPYLASSFLGKM 133
Query: 267 VGSGKELHRSELSFLIGVLCESNRFERAVELVS---EFGTSLPLENAYGVWIRGLVQGGR 323
+ G E + LI C NR E A+ +V+ E G P Y I L + G
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK-PDVVMYTTIIDSLCKNGH 192
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
++ AL F Q ++ G P V Y L+ L R +D LL M + I P+++T N
Sbjct: 193 VNYALSLFDQ-MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
A++ F K G A EL+N + ++PN Y LI C +GC EA ++
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G FPD +++L N C+ K+D+ + ++ N+ TY+
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT--------------- 356
Query: 504 YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH 563
+I GF + + ++A + M +G +Y +LHCL +
Sbjct: 357 -----------------TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 564 MDNPRTRFFNLLEM----MTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+ +M M P+ +N + G + K + A VFE M++ +
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGL 664
+ ++++ ++ ++ +A+ F + + V + Y MI GL
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/540 (18%), Positives = 214/540 (39%), Gaps = 71/540 (13%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+ +EAL+ F +S +P + + L+ + + + V L + + ++ T
Sbjct: 52 QFNEALDLFTHMVESRP-LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N ++ FC+ +A + G P+ + + LI C +EA ++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
G PD ++T+ ++LC+ ++ L D P+ Y+ V+ LC +GR D
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 503 G-YLMRGDLDKVTAR--FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
L+RG + ++ +I F+K + ++ +E E+ R S
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGK-------FLDAEELYNEMIRMSI----- 278
Query: 560 CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
P+ + S I+G D AR++F LM+ G +
Sbjct: 279 ----------------------APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCF 678
+ ++ + + +++ DA++ F ++ + + +T Y +I G + K ++A E+
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISP 738
M+ G+ P+I Y VL+ LC + +A+ + +K R + N+ ++ ++
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK--REMDGVAPNIWTYNVLLHG 434
Query: 739 EVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNL 798
Y+ ++ ++ E++ + + I TY +
Sbjct: 435 LCYNG-----------------------------KLEKALMVFEDMRKREMDIGIITYTI 465
Query: 799 LMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKG 857
+++ + + A LF + +G++PN TY M G G K EA +M + G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 183/452 (40%), Gaps = 45/452 (9%)
Query: 139 FVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMR 198
F + +++ + +V + + H + L+ + + +P +A LG+M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 199 FQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMT-NVIVIKHLCKQGRLE 257
G + D + L+N N + NQ+ G + + +I LCK G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 258 EA-------------------EAHLNGLVGSG--------------KELHRSELSF--LI 282
A + +NGL SG +++ ++F LI
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 283 GVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGF 340
+ +F A EL +E + P Y I G G +DEA + F +++G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL-METKGC 313
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
P V Y LI + ++ D ++ +M++ + N +T ++ F ++G +VA E
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV---LRSSSGTGYFPDRRTFSTLAN 457
+F+ G+ PN Y L+ LC++G K+A + ++ G P+ T++ L +
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR- 516
LC K+++ + + +R TY+ + +C+AG+V++ + L +
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 517 --FSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+Y MI G + A L +MKE G
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 125/292 (42%), Gaps = 37/292 (12%)
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTK 655
+++P LA M + G + + ++ + R+ +A+ N + +
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVV 178
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
+Y +I LCK+ + AL L +M G+ P + Y LV LC+ R+ +A +L+
Sbjct: 179 MYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM 238
Query: 716 EKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSML-------------- 761
K R++ +V+ F+++I V KEG+FLD+ L
Sbjct: 239 TK--RKIKP---DVITFNALIDAFV----------KEGKFLDAEELYNEMIRMSIAPNIF 283
Query: 762 --TLIIGAF--SGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFD 816
T +I F GC+ + + L E CFP D+ Y L+ +D A ++F
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLME-TKGCFP-DVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 817 RMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
M Q+GL N TY + GF G+ + A+ M+ +G P T NV+
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 211/525 (40%), Gaps = 48/525 (9%)
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNV 244
K D A+ L G M F ++ LL+++A+ ++ + ++ G ++ T
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS---EF 301
I+I C++ ++ A A L ++ G E LS L+ C R AV LV E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 302 GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
G P + I GL + EA+ + G P V Y +++ L + +
Sbjct: 185 GYR-PDTITFTTLIHGLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
+ LL M I N+V + V+ CK D AL LF G+ PN + Y LI
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
LC +A R+L P+ TF+ L +A +E K+ E L D ++R
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 482 PNSSTYSRFVSALCRAGRVEDG---YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARL 538
P+ TYS ++ C R+++ + + D +Y +I GF K+ R D L
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHM---DNPRTRFFNLLEMMTHGKPHCDIFNSFIDGA 595
EM ++G +Y ++H DN + F ++ H P+ +N+ +DG
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH--PNIMTYNTLLDGL 480
Query: 596 MHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTK 655
K + A VFE +QR+ + + + T
Sbjct: 481 CKNGKLEKAMVVFEYLQRS--------------------------------KMEPTIYT- 507
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
YN MI G+CK+ K + +L + G+ P + Y ++ C
Sbjct: 508 -YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 130/558 (23%), Positives = 222/558 (39%), Gaps = 64/558 (11%)
Query: 140 VAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRF 199
+ +F + +R P +F+F + L+ A K D+ + L +M+
Sbjct: 70 IGLFGGMVKSRPLPSIFEF----------------NKLLSAIAKMKKFDLVISLGEKMQR 113
Query: 200 QGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEA 259
G+ + + Y+IL+ NC+ C++ ++ A
Sbjct: 114 LGISHNLYTYNILI------NCF----------------------------CRRSQISLA 139
Query: 260 EAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS---EFGTSLPLENAYGVWIR 316
A L ++ G E LS L+ C R AV LV E G P + I
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR-PDTITFTTLIH 198
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
GL + EA+ + G P V Y +++ L + + + LL M I
Sbjct: 199 GLFLHNKASEAVALV-DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
N+V + V+ CK D AL LF G+ PN + Y LI LC +A R+
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
L P+ TF+ L +A +E K+ E L D ++R P+ TYS ++ C
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 497 AGRVEDG---YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
R+++ + + D +Y +I GF K+ R D L EM ++G +
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 554 YRHVLHCLLHM---DNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFEL 610
Y ++H DN + F ++ H P+ +N+ +DG K + A VFE
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVH--PNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDK 669
+QR+ + + ++++ ++ ++ D F + + V +YN MI G C+
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 670 ADIALELCFEMLKVGLNP 687
+ A L +M + G P
Sbjct: 556 KEEADALFRKMREDGPLP 573
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/556 (22%), Positives = 227/556 (40%), Gaps = 41/556 (7%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+R + +LD+A+ F S +P +N L+ + + + V L M
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
I N+ T N ++ FC+ + +AL L + G P+ + L+ C +A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
++ GY PD TF+TL + L K E L+D ++R PN TY V+ L
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 495 CRAGRVEDGY--LMRGDLDKVTARFS-YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
C+ G ++ + L + + K+ A Y+ +I K D A L EM+ KG
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFEL 610
+Y ++ CL + + L +M+ P+ FN+ ID + K A ++++
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFN-DIRHQVVVSTKLYNRMIVGLCKSDK 669
M + I + + ++ + R+ +A F I + YN +I G CK+ +
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
D +EL EM + GL + Y L+ +++A + N
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHG------FFQARDCDNAQ-------------- 455
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF 789
++F M+S V+ + + +G + G + V +Q +K
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKN--------GKLEKAMVVFEYLQR-----SKME 502
Query: 790 PVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
P IYTYN+++ + ++ +LF + +G++P+ Y M GF G K+EA
Sbjct: 503 PT-IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 849 WVHEMLKKGFNPPENT 864
+M + G P T
Sbjct: 562 LFRKMREDGPLPDSGT 577
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 195/442 (44%), Gaps = 25/442 (5%)
Query: 440 SSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
SSG+G + + L N L K+D+ L ++ R +P+ +++ +SA+ + +
Sbjct: 47 SSGSGDYRE-----ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKK 100
Query: 500 VEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRH 556
+ + + ++ ++Y +I F + ++ +A LL +M + GYE +
Sbjct: 101 FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 557 VLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
+L+ H + +M+ G +P F + I G NK A + + M + G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIAL 674
N + +V+ + I A N + ++ + +Y+ +I LCK D AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHS 734
L EM G+ P++ Y L+ LC+ +R+ +A L++ + R++ NV+ F++
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS--DMIERKINP---NVVTFNA 335
Query: 735 MISPEVYHSCV----DLRREKEGEFLDSSMLTL--IIGAFSGCLRVSYSIQELEELIAK- 787
+I V + L E +D + T +I F R+ + E +I+K
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 788 CFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
CFP ++ TYN L+ +D+ ELF M QRGL N TY + HGF D A
Sbjct: 396 CFP-NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 847 KRWVHEMLKKGFNPPENTRNVI 868
+ +M+ G +P T N +
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTL 476
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 194/476 (40%), Gaps = 8/476 (1%)
Query: 154 LVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILL 213
LV + H ++ L+ + + +AL LLG+M G + LL
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 214 NSLAENNCYNAFDVIANQICMRGYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
N + + +Q+ GY +T +I L + EA A ++ +V G +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 273 LHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEF 330
+ ++ LC+ + A L+++ + N Y I L + D+AL
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
F + +++G P + Y+ LI L R D LL DM E I PN+VT NA++ F
Sbjct: 283 FTE-MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
K G + A +L++ + + P+ Y LI C EA + FP+
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
T++TL N C+ +IDE +L +R + N+ TY+ + +A ++ ++ +
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 511 --DKVTARF-SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNP 567
D V +Y ++ G K+ + + A + ++ E +Y ++ +
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 568 RTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
+ + G KP I+N+ I G + A +F M+ +G + ++ +
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/518 (21%), Positives = 189/518 (36%), Gaps = 71/518 (13%)
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L +L D L M ++ P++ N +L K+ D+ + L + G+S N
Sbjct: 61 LHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNL 120
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
Y LI C A +L GY P T S+L N C +I + L+D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDI 534
+E + P++ T++ +I G N+
Sbjct: 181 MVEMGYRPDTITFT--------------------------------TLIHGLFLHNKASE 208
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD--IFNSFI 592
A L+ M ++G + +Y V++ L + F NLL M K + I+++ I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF-NLLNKMEAAKIEANVVIYSTVI 267
Query: 593 DGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVV 651
D D A +F M+ G+ N + ++ R SDA R +D I ++
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 652 VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ +N +I K K A +L EM+K ++P I Y L+ C R EA ++
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 712 VNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGC 771
F MIS + + + V +I F
Sbjct: 388 --------------------FELMISKDCFPNVV--------------TYNTLINGFCKA 413
Query: 772 LRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTY 830
R+ ++ E+ + + TY L+ D D A +F +M G+ PN TY
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 831 GLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ G +G+ ++A + + P T N++
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 180/415 (43%), Gaps = 12/415 (2%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+R L G+LD AL + R+K G +P + +N L+ L + ++ L+ +M E
Sbjct: 128 MRDLCLQGKLDAAL-WLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC----- 429
PN V+ N ++ C + VD AL LFN+ +++G+ PN + ++ LC G
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
K +L SS D + L ++ + + + ++ ++ +S Y+
Sbjct: 247 KKLLEEILDSSQANAPL-DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305
Query: 490 FVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+ LC +G + Y D+ K F+Y +I K + D A L M+ G
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365
Query: 547 YELKRSSYRHVLHCL-LHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAR 605
+ SY+ ++ L +H D R F L + + P ++N IDG A
Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGL 664
V LM G+ N + ++ Y + R+ DA N++R ++ T YN ++
Sbjct: 426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
C +A +L EML+ G P I Y LV+ LC R +A +L++ + G
Sbjct: 486 CTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 186/475 (39%), Gaps = 43/475 (9%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
H +++ + GK D AL L +M + G+ ++ LLN L + D + ++
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 234 MRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCE----- 287
G + + +IK LC +++A N + G +R + ++ LC+
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 288 SNRFERAVELVSEFGTSLPLENAY-GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC-KV 345
+N + E++ + PL+ + + + G + +ALE +++ S+ VP V
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM--SQKNVPADSV 301
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
YN++I L + Y + DM + + P++ T N ++ CK G D A +L +
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
G++P+ ++YK +I LC G A L S + P+ ++ + + R
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMG 525
+L+ L PN T + + + GR+ D + ++
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN----------------- 464
Query: 526 FIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPH 584
EM+ ++Y +L + + R F EM+ G +P
Sbjct: 465 ---------------EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 585 CDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDA 639
+ + G + A + +Q GI + +++ K Y R +R +A
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 171/453 (37%), Gaps = 83/453 (18%)
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE--DGYL--MRG 508
S++ LC + K+D L + +P T++ ++ LC+AG +E DG + MR
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR- 183
Query: 509 DLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
++ SY +I G N D A L M + G R + ++H L
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ----- 238
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
G + N L E+ + Q N + IL M
Sbjct: 239 ------------------------KGVIGNNNKKLLEEILDSSQANAPLDIVICTIL-MD 273
Query: 629 SYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
S F++ + AL + ++ + V + +YN +I GLC S A +M+K G+NP
Sbjct: 274 SCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL----FHSMIS------ 737
+ Y L+ LC ++ EA +L + G V++ H ++
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 738 ---------PEV--YHSCVDLRREKEGEFLDSS--------MLT------------LIIG 766
PEV ++ +D G + D+S ML+ LI G
Sbjct: 394 LSMLKSSLLPEVLLWNVVID----GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 767 AFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLM-RKLTHHDMDKACELFDRMCQRGLEP 825
G + + E K P D TYNLL+ T + A +L+D M +RG +P
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHP-DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQP 508
Query: 826 NRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ TY + G GR +A+ + + G
Sbjct: 509 DIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 190/478 (39%), Gaps = 52/478 (10%)
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
C G +D AL L G+ P + + +L+ LC G ++A ++R G P+
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV--EDGYLM 506
+++TL LC +D+ L + + PN T + V ALC+ G + + L+
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 507 RGDLDKVTARFSYAKMIMGFIKSN---RGDIAARLLV--EMKEKGYELKRSSYRHVLHCL 561
LD A +I + + G++ L V EM +K Y ++ L
Sbjct: 251 EEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGL 310
Query: 562 LHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
N + + +M+ G P +N+ I K D A ++ MQ G+ +
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQ 370
Query: 621 SSQILVMKSYFRSRRISDALRFFNDIRHQVVV-STKLYNRMIVGLCKSDKADIALELCFE 679
S ++++ ++ A F + ++ L+N +I G + AL +
Sbjct: 371 ISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNL 430
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPE 739
ML G+ P++ Y L++ Y K GR + ++ + + I P
Sbjct: 431 MLSYGVKPNV----------------YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP- 473
Query: 740 VYHSCVDLRREKEGEFLDSSMLTLIIGAFS--GCLRVSYSIQELEELIAKCFPVDIYTYN 797
D++ L++GA G LR+++ + + E L C P DI TY
Sbjct: 474 -----------------DTTTYNLLLGAACTLGHLRLAFQLYD-EMLRRGCQP-DIITYT 514
Query: 798 LLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA----KRWV 850
L+R L + KA L R+ G+ + + ++A ++ R EA K+W+
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWL 572
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 14/233 (6%)
Query: 646 IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
I V+ +N ++ GLCK+ + A L EM ++G +P+ Y L++ LCS+
Sbjct: 148 IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNV 207
Query: 706 YEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM----L 761
+A+ L N K G R N+++ H++ V + ++ E LDSS L
Sbjct: 208 DKALYLFNTMNKYGIRPNRVTCNIIV-HALCQKGVIG---NNNKKLLEEILDSSQANAPL 263
Query: 762 TLIIGAF--SGCLRVSYSIQELE---ELIAKCFPVDIYTYNLLMRKL-THHDMDKACELF 815
++I C + +Q LE E+ K P D YN+++R L + +M A
Sbjct: 264 DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFM 323
Query: 816 DRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
M +RG+ P+ +TY + G+ DEA M G P + + VI
Sbjct: 324 CDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/581 (21%), Positives = 227/581 (39%), Gaps = 70/581 (12%)
Query: 311 YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM 370
+G+ G + G ++EA+ F E VP R +L+ LLR NRL +++ M
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLE-LVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212
Query: 371 NETCIPPNMVTMNAVLCFFCKLGMVDVALE-LFNSRSQF--------------------G 409
E + ++ T + ++ C+ G V + + LF + +F G
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
L P Y LI LC ++A +L G D T+S L + L + D
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVE------DGYLMRGDLDKVTARFSYAKMI 523
L+ + Y + + + G +E DG + G + + A YA +I
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA---YASLI 389
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-K 582
G+ + LLVEMK++ + +Y V+ + + + + EM+ G +
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P+ I+ + I K++ ++ R DA+R
Sbjct: 450 PNVVIYTTLI-----------------------------------KTFLQNSRFGDAMRV 474
Query: 643 FNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
+++ Q + YN +I+GL K+ + D A EM++ GL P+ Y +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 702 LKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE-KEGEFLDSSM 760
+ A V + G L L+ +V +C R +G D+
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMC 819
T+++ +V + + E+ K D+++Y +L+ + +M KA +FD M
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ GL PN Y ++ GF G ++AK + EM KG +P
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 152/660 (23%), Positives = 259/660 (39%), Gaps = 46/660 (6%)
Query: 220 NCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
N A + + IC T ++I LCK RLE+A++ L + G L S
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 280 FLIGVLCESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
LI L + + A LV E G ++ Y I + + G +++A F
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIK-PYMYDCCICVMSKEGVMEKAKALFDGMIA 375
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
S G +P Y LI RE ++ YELL++M + I + T V+ C G +D
Sbjct: 376 S-GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A + G PN + Y LI T + +A RVL+ G PD +++L
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
L + ++DE L +E PN+ TY F+S A DK
Sbjct: 495 IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-------DKYVKE 547
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR-SSYRHVLHCLLHMDNPRTRFFNLL 575
++ + + L+ E +KG ++ S+YR ++ + D
Sbjct: 548 MRECGVLPNKV------LCTGLINEYCKKGKVIEACSAYRSMVDQGILGD---------- 591
Query: 576 EMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRR 635
+ ++G +K D A E+F M+ GI + S +++ + +
Sbjct: 592 ---------AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 636 ISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEV 694
+ A F++ + + + +YN ++ G C+S + + A EL EM GL+P+ Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 695 LVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGE 754
++ C EA L + + G SF+ L+ +V + K+G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 755 FLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF-----PVDIYTYNLLMRKLTHH-DM 808
++ +I + + L L+ F P D+ TYN+++ L ++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV-TYNIMIDYLCKEGNL 821
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ A ELF +M L P TY + +G+ GR+ E E + G P +VI
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 212/514 (41%), Gaps = 39/514 (7%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
+ T+V G +G D A +++ M G + Y L+ + +N+ + + ++
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 234 MRGYESHM--TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
+G + N ++I L K R++EA + L +V +G + + I E++ F
Sbjct: 480 EQGIAPDIFCYNSLII-GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 292 ERAVELVSEFGTSLPLENAYGVWIRGLV----QGGRLDEALEFFRQKRDSEGFVPCKVRY 347
A + V E L N V GL+ + G++ EA +R D +G + Y
Sbjct: 539 ASADKYVKEMRECGVLPNK--VLCTGLINEYCKKGKVIEACSAYRSMVD-QGILGDAKTY 595
Query: 348 NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ 407
+L+ L + +++ D E+ +M I P++ + ++ F KLG + A +F+ +
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
GL+PN + Y L+ C G ++A +L S G P+ T+ T+ + C+ + E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 468 MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFI 527
+ L D + +P+S Y+ V CR VE + G K A
Sbjct: 716 AFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA------------ 763
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI 587
S+ A + K ELK VL+ L MD RF GKP+
Sbjct: 764 -SSTAPFNALINWVFKFGKTELK----TEVLNRL--MDGSFDRF---------GKPNDVT 807
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-I 646
+N ID + A+E+F MQ +M + ++ Y + R ++ F++ I
Sbjct: 808 YNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI 867
Query: 647 RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEM 680
+ +Y+ +I K AL L +M
Sbjct: 868 AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 130/335 (38%), Gaps = 44/335 (13%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIAN 230
A+ + L+ G K D A + MR +G+ D F Y +L+N +
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS------------- 638
Query: 231 QICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNR 290
K G +++A + + +V G + + L+G C S
Sbjct: 639 ---------------------KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 291 FERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
E+A EL+ E NA Y I G + G L EA F + + +G VP Y
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-LKGLVPDSFVYT 736
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN----- 403
L+ R N ++ + + C + NA++ + K G ++ E+ N
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGC-ASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
S +FG PN + Y +I LC +G + A + P T+++L N +
Sbjct: 796 SFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+ EM+ + D A+ P+ YS ++A + G
Sbjct: 855 RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 129/521 (24%), Positives = 221/521 (42%), Gaps = 14/521 (2%)
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNV 244
K D A+ L G M ++ LL+++A+ N + + Q+ G + T
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS---EF 301
I I C++ +L A A L ++ G E LS L+ C S R AV LV E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 302 GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
G P + I GL + EA+ Q G P V Y ++ L + +
Sbjct: 183 GYK-PDTFTFTTLIHGLFLHNKASEAVALVDQMV-QRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
LL M I N+V N ++ CK V+VA++LF G+ PN + Y LI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
LC G +A R+L + P+ TF+ L +A +E K+ E L + ++R
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARL 538
P++ TY+ ++ C R+++ M + D + +Y +I GF K R + L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAM 596
EM ++G +Y ++ + + +M+++ P DI ++ + G
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP-TDIMTYSILLHGLC 479
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL 656
K D A +F+ +Q++ + N +++ ++ ++ +A F + + V T
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT-- 537
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
YN MI GLC A +L +M + G P+ Y L++
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/507 (21%), Positives = 201/507 (39%), Gaps = 46/507 (9%)
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
IL RL ++ D +L DM ++ P++V N +L K+ ++ + L
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
G+S + Y I C A VL GY PD T S+L N C +I +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKM 522
L+D +E + P++ T++ + L + + + +D++ R +Y +
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL---VDQMVQRGCQPDLVTYGTV 229
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG- 581
+ G K D+A LL +M+ + + ++ L + EM T G
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
+P+ +NS I+ + + A + M I N + ++ ++F+ ++ +A +
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 642 FFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
+ I+ + T YN +I G C ++ D A ++ M+ P+I+ Y L+ C
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 701 SLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM 760
KR + V L + G +GN + +
Sbjct: 410 KCKRVEDGVELFREMSQRG-----LVGNTVTY---------------------------- 436
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMC 819
T II F + +++++ P DI TY++L+ L ++ +D A +F +
Sbjct: 437 -TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEA 846
+ +E N + Y M G G+ EA
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEA 522
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 9/268 (3%)
Query: 241 MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE 300
+T ++I C RL+EA+ +V + + LI C+ R E VEL E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 301 FGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKV-RYNILIGRLLRE 357
+ N Y I+G Q G D A F+Q + VP + Y+IL+ L
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR--VPTDIMTYSILLHGLCSY 481
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
+L + + ++ + N+ N ++ CK G V A +LF S S + P+ + Y
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTY 538
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
+I LC +EA + R G P+ T++TL A R+C +L+
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYL 505
F+ ++ST S V+ + GR++ +L
Sbjct: 599 SGFVGDASTIS-LVTNMLHDGRLDKSFL 625
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 25/297 (8%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN----CYNAFDVIAN 230
+ L+ + GK A L M + +D D Y++L+N +N F + +
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 231 QICMRGYESHMTNVIVIKHLCKQGRLEEA-----EAHLNGLVGSGKELHRSELSFLIGVL 285
+ C+ +++ T +I CK R+E+ E GLVG+ F
Sbjct: 392 KDCLPNIQTYNT---LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 286 CESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKV 345
C+S + + + T + Y + + GL G+LD AL F+ + SE + +
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIM---TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
YN +I + + ++ + ++L ++ I P++VT N ++ C ++ A +LF
Sbjct: 506 -YNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKM 561
Query: 406 SQFGLSPNYMAYKYLI---LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ G PN Y LI L C E + +RSS G+ D T S + N L
Sbjct: 562 KEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS---GFVGDASTISLVTNML 615
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 142/650 (21%), Positives = 266/650 (40%), Gaps = 75/650 (11%)
Query: 119 CLKFFDWAGRQPRFYHT-RTTFVAIF--------RILSCARLRPLVFDFLRDFRSCSFPH 169
L+ FDW +Q + + VAI R+ S A + F+ L++ F
Sbjct: 154 ALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM----FNGLQE---DGFSL 206
Query: 170 RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVI 228
+ +L+ +A +G+ A+++ +M G Y+++LN + +N +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 229 ANQICMRGYESHMTNVIVIKHLCKQGRL-EEAEAHLNGLVGSGKELHRSELSFLIGVLCE 287
++ G + CK+G L +EA + +G + + L+ V +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 288 SNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
S+R + A+++++E G S P Y I + G LDEA+E Q + +G P
Sbjct: 327 SHRPKEAMKVLNEMVLNGFS-PSIVTYNSLISAYARDGMLDEAMELKNQMAE-KGTKPDV 384
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
Y L+ R +++ + +M PN+ T NA + + G +++F+
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ GLSP+ + + L+ +G E V + G+ P+R TF+TL +A R
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG----------RVEDGYLMRGDLDKVT 514
++ + L+ P+ STY+ ++AL R G +EDG +L +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 515 ARFSYA-------------KMIMGFIKS------------NRGDI---AARLLVEMKEKG 546
+YA ++ G I+ ++ D+ A R E+KE+G
Sbjct: 565 LLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Query: 547 YELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-----PHCDIFNSFIDGAMHANKP 601
+ ++ L+ ++ + R ++ + K P +NS + MH+
Sbjct: 625 FSPDITT----LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM--YMHSRSA 678
Query: 602 DLAR--EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YN 658
D + E+ + GI + S V+ +Y R+ R+ DA R F+++R+ +V + YN
Sbjct: 679 DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 659 RMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEA 708
I + A+ + M+K G P+ Y +V C L R EA
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 136/666 (20%), Positives = 258/666 (38%), Gaps = 28/666 (4%)
Query: 204 LDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTN---VIVIKHLCKQGRLEEAE 260
L G G+H + LA AFD Q + Y+S + N I+I L K+GR+ A
Sbjct: 142 LKGLGFHKKFD-LA----LRAFDWFMKQ---KDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 261 AHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS--EFGTSLPLENAYGVWIRGL 318
NGL G L + LI S R+ AV + E P Y V +
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF 253
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ G + +K S+G P YN LI R + ++ ++ +M +
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYD 313
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
VT NA+L + K A+++ N G SP+ + Y LI DG EA +
Sbjct: 314 KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKN 373
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+ G PD T++TL + R K++ + + PN T++ F+ G
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 499 RVEDGYLMRGDLDKVTA------RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
+ + M D++ ++ ++ F ++ + + EMK G+ +R
Sbjct: 434 KFTE---MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELM 611
++ ++ + M+ G P +N+ + + + +V M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 612 QRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLC-KSDKA 670
+ N + ++ +Y + I ++ V+ + + +V +C K D
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 671 DIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL 730
A E+ + G +P I +V + +A +++ ++ G + N L
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 731 LFHSMISPEVYHSCVDLRREKEGEFLDSSMLT--LIIGAFSGCLRVSYSIQELEELIAKC 788
++ S + + ++ RE + + +++ +I A+ R+ + + E+
Sbjct: 671 MYMHSRSAD-FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 789 FPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAK 847
D+ TYN + M ++A + M + G PN+ TY + G+ RKDEAK
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Query: 848 RWVHEM 853
+V ++
Sbjct: 790 LFVEDL 795
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 115/569 (20%), Positives = 225/569 (39%), Gaps = 68/569 (11%)
Query: 312 GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMN 371
+ I L + GR+ A F ++ +GF Y LI R ++ + M
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQE-DGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 372 ETCIPPNMVTMNAVLCFFCKLGMV-DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC- 429
E P ++T N +L F K+G + L G++P+ Y LI T C G
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSL 294
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
+EA +V G+ D+ T++ L + + + E +L+ + F P+ TY+
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 490 FVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+SA R G +++ ++ + + + F+Y ++ GF ++ + + A + EM+ G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 547 YELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAR- 605
C KP+ FN+FI M+ N+
Sbjct: 415 -------------C---------------------KPNICTFNAFIK--MYGNRGKFTEM 438
Query: 606 -EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVG 663
++F+ + G+ + + ++ + ++ S+ F ++ R V + +N +I
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 664 LCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLT 723
+ + A+ + ML G+ P + Y ++ L + ++ ++ E GR
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED-GRCKP 557
Query: 724 SFLGNVLLFHSM-----------ISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCL 772
+ L L H+ ++ EVY ++ R + +L ++ S C
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR---------AVLLKTLVLVCSKCD 608
Query: 773 RVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYG 831
+ + + EL + F DI T N ++ M KA + D M +RG P+ TY
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 832 LMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ + S +++ + E+L KG P
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKP 697
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 113/280 (40%), Gaps = 11/280 (3%)
Query: 590 SFIDGAMHANKPDLAREVFELMQRNG---IMTNASSQILVMKSYFRSRRISDALRFFNDI 646
+F+ G K DLA F+ + M + S +++ + R+S A FN +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL 199
Query: 647 RHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
+ + Y +I S + A+ + +M + G P++ Y V++ +
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 706 YEAV-NLVNVYEKAGRRLTSFLGNVLLF---HSMISPEVYHSCVDLRREKEGEFLDSSML 761
+ + +LV + G ++ N L+ + E +++ G D
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK--AAGFSYDKVTY 317
Query: 762 TLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQ 820
++ + R +++ L E++ F I TYN L+ M D+A EL ++M +
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 821 RGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+G +P+ +TY + GF G+ + A EM G P
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 132/600 (22%), Positives = 234/600 (39%), Gaps = 61/600 (10%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
++I+ + +L EA L G + + LIG L E A + E S
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 305 LPLENAY--GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKD 362
N Y + + L + G++++ F Q ++ +G P V YN LI + +++
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE-KGVYPDIVTYNTLISAYSSKGLMEE 288
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
+EL+ M P + T N V+ CK G + A E+F + GLSP+ Y+ L++
Sbjct: 289 AFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM 348
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
C G E +V PD FS++ + R +D+ + E +P
Sbjct: 349 EACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIP 408
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGD-------LDKVTARFSYAKMIMGFIKSNRGDIA 535
++ Y+ + CR G + +R + +D VT Y ++ G K A
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT----YNTILHGLCKRKMLGEA 464
Query: 536 ARLLVEMKEKGYELKRSSYRHVL----HCLL-HMDNPRTRFFNLLEMMTHGKPHCDI--F 588
+L EM E+ L SY + HC L ++ N L + M + D+ +
Sbjct: 465 DKLFNEMTERA--LFPDSYTLTILIDGHCKLGNLQNA----MELFQKMKEKRIRLDVVTY 518
Query: 589 NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IR 647
N+ +DG D A+E++ M I+ S +++ + +++A R +++ I
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 648 HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYE 707
+ + + N MI G C+S A +M+ G P Y L+ + +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 708 AVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGA 767
A LV E+ L +V ++S++ H + KE E +
Sbjct: 639 AFGLVKKMEEEQGGLVP---DVFTYNSIL-----HGFCRQNQMKEAEVV----------- 679
Query: 768 FSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPN 826
L ++I + D TY ++ D + +A + D M QRG P+
Sbjct: 680 -------------LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 145/675 (21%), Positives = 260/675 (38%), Gaps = 124/675 (18%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL 305
+I L + GRL +A++ L ++ RS +S R E L S F
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMI------RRSGVS----------RLEIVNSLDSTFSNCG 162
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
++ + + IR VQ +L EA E F R S+GF N LIG L+R
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLR-SKGFTVSIDACNALIGSLVR--------- 212
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
+G V++A ++ S+ G+ N ++ LC
Sbjct: 213 --------------------------IGWVELAWGVYQEISRSGVGINVYTLNIMVNALC 246
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
DG ++ L G +PD T++TL +A + ++E ++L++ + F P
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 486 TYSRFVSALCRAGRVEDG---------------------YLM----RGDLDKVTARFS-- 518
TY+ ++ LC+ G+ E LM +GD+ + FS
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 519 -----------YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL--HCLLHMD 565
++ M+ F +S D A +KE G Y ++ +C M
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 566 NPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQI 624
+ N EM+ G +N+ + G A ++F M + ++ +
Sbjct: 427 SVAMNLRN--EMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 625 LVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKV 683
+++ + + + +A+ F ++ + + + YN ++ G K D A E+ +M+
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 684 GLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL------------ 731
+ P+ Y +LV LCS EA + + + T + N ++
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 732 ---FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKC 788
MIS C+ G F+ ++ G ++++EE
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYG-FVREENMSKAFGL----------VKKMEEEQGGL 653
Query: 789 FPVDIYTYNLLMRKLTHHDMDKACELFDR-MCQRGLEPNRWTYGLMAHGFSNHGRKDEAK 847
P D++TYN ++ + K E+ R M +RG+ P+R TY M +GF + EA
Sbjct: 654 VP-DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 848 RWVHEMLKKGFNPPE 862
R EML++GF+P +
Sbjct: 713 RIHDEMLQRGFSPDD 727
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/517 (21%), Positives = 222/517 (42%), Gaps = 22/517 (4%)
Query: 266 LVGSGKELHRSEL-------SFLIGVLCESNRFERAVELVSEFGTSLPLENAY---GVWI 315
++ G+++ R E+ + LI C ++ A+ L+ + L E + +
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLL 162
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
G G R+ +A+ Q + G+ P + + LI L N+ + L+ M +
Sbjct: 163 NGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
PN+VT V+ CK G D+AL L N + + + + +I +LC +A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
+ + G P+ T+S+L + LC + + LL +E++ PN T++ + A
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 496 RAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
+ G+ + + D+ K + F+Y ++ GF +R D A ++ M K
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 553 SYRHVLH--CLLHMDNPRTRFFNLLEMMTHGKPHCDI-FNSFIDGAMHANKPDLAREVFE 609
+Y ++ C T F EM G + + + I G H D A++VF+
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFR--EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSD 668
M +G+ + + +++ + ++ AL F+ + + ++ + +Y MI G+CK+
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 519
Query: 669 KADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGN 728
K D +L + G+ P++ Y ++ LCS + EA L+ ++ G S N
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 729 VLLFHSMISPEVYHSCVDLRREKEGEFL-DSSMLTLI 764
L+ + + S +R + F+ D+S + L+
Sbjct: 580 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 130/575 (22%), Positives = 224/575 (38%), Gaps = 82/575 (14%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+LD+A+ F S +P V +N L+ + + + V L M I + T
Sbjct: 65 KLDDAIGLFGGMVKSRP-LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTY 123
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N ++ FC+ + +AL L + G P+ + L+ C +A ++
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
GY PD TF+TL + L K E L+D ++R PN TY V+ LC+ G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG---D 240
Query: 503 GYLMRGDLDKVTARFSYAKMIM------GFIKSNRGDIAARLLVEMKEKGYELKRSSYRH 556
L L+K+ A A +++ K D A L EM+ KG +Y
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 557 VLHCLLHMD-----------------NPRTRFFNLL--EMMTHGK--------------- 582
++ CL NP FN L + GK
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 583 --PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
P +NS ++G ++ D A+++FE M + + ++K + +S+R+ D
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 641 RFFNDIRHQVVVS-TKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
F ++ H+ +V T Y +I GL D A ++ +M+ G+ P I Y +L+ L
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSS 759
C+ + +A+ + + +K+ +L ++ ++ +MI VD +G L S
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKL-----DIYIYTTMIEGMCKAGKVD-----DGWDLFCS 530
Query: 760 MLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRM 818
L K ++ TYN ++ L + + +A L +M
Sbjct: 531 ------------------------LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 819 CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEM 853
+ G PN TY + G K + + EM
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 174/424 (41%), Gaps = 42/424 (9%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMR 235
+L+ GY + A+ L+ +M G D + L++ L +N + + +++ R
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 236 GYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G + ++ T +V+ LCK+G + A LN + + E + +I LC+ + A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 295 VELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
+ L E T P Y I L GR +A + + + P V +N LI
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALID 338
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL-----------------------CF- 388
++E + + +L DM + I P++ T N+++ CF
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 389 -----------FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
FCK V+ ELF S GL + + Y LI L DG A +V
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
+ G PD T+S L + LC K+++ ++ D+ + + Y+ + +C+A
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 498 GRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSY 554
G+V+DG+ + L + +Y MI G A LL +MKE G +Y
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 555 RHVL 558
++
Sbjct: 579 NTLI 582
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/526 (20%), Positives = 209/526 (39%), Gaps = 52/526 (9%)
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L + +L D L M ++ P++V N +L K+ DV + L + +
Sbjct: 61 LHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL 120
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
Y LI C A +L GY P T S+L N C +I + L+D
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIK 528
+E + P++ T++ + L + + + +D++ R +Y ++ G K
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVAL---VDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 529 SNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL---HMDNPRTRFFNLLEMMTHG-KPH 584
D+A LL +M+ E + ++ L H+D+ F EM T G +P+
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF---KEMETKGIRPN 294
Query: 585 CDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN 644
++S I + A ++ M I N + ++ ++ + + +A + ++
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 645 D-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLK 703
D I+ + YN ++ G C D+ D A ++ M+ P + Y L++ C K
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 704 RYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL 763
R + L G +G+ + + ++I +G F D
Sbjct: 415 RVEDGTELFREMSHRG-----LVGDTVTYTTLI---------------QGLFHD------ 448
Query: 764 IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRG 822
G +V +++++ P DI TY++L+ L ++ ++KA E+FD M +
Sbjct: 449 --GDCDNAQKV------FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 823 LEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
++ + + Y M G G+ D+ + KG P T N +
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTM 546
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 20/296 (6%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN----CYNAFDVIAN 230
+ L+ + GK A L M + +D D F Y+ L+N ++ F+ + +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 231 QICMRGYESHMTNVIVIKHLCKQGRLEEA-----EAHLNGLVGSGKELHRSELSFLIGVL 285
+ C ++ T +IK CK R+E+ E GLVG + LI L
Sbjct: 394 KDCFPDVVTYNT---LIKGFCKSKRVEDGTELFREMSHRGLVGD-----TVTYTTLIQGL 445
Query: 286 CESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
+ A ++ + + P Y + + GL G+L++ALE F + SE +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
+ Y +I + + ++ D ++L ++ + PN+VT N ++ C ++ A L
Sbjct: 506 YI-YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ G PN Y LI DG + ++R + D T +AN L
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 169/782 (21%), Positives = 302/782 (38%), Gaps = 121/782 (15%)
Query: 118 SCLKFFDWA---GRQPRFYHTRTTFV--AIFRILSCARLRPLVFDFLRDFRSCSF----P 168
S LK+F WA G+ P FY + +F + VFD + R F
Sbjct: 85 SALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVAD------KVFDEMITNRGKDFNVLGS 138
Query: 169 HRARYHDTLVVGYAIA-----GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN 223
R R D V + + G D AL + G+ + + +LNSL ++
Sbjct: 139 IRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD--- 195
Query: 224 AFDVIAN---QICMRGYESHMTNV--IVIKHLCKQGRLEEAEAHLNGLVGSGKELHR--S 276
D+IA+ ++C G E + V+ L +G + +A + HR
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKA-----------LDFHRLVM 244
Query: 277 ELSFLIGVLC--------ESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDE 326
E F +G++ ++ E A L+S P N + I G + G +D
Sbjct: 245 ERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
A + F+ + G P + Y+ LI + L ++L + ++V ++ +
Sbjct: 305 AFDLFKV-MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ K G + A ++ G+SPN + Y LI LC DG EA+ + G
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
P T+S+L + C+ + + L + ++ + P+ Y V L + G +
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 507 RGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH 563
+ + R + + +I G+ + NR D A ++ M G + +++ V+
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV--- 540
Query: 564 MDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQ 623
+++E D KP + ++F+LMQRN I + +
Sbjct: 541 ---------SIME----------------DAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 624 ILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLK 682
+V+ F+ RI DA +FFN+ I ++ YN MI G C + D A E FE+LK
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA-ERIFELLK 634
Query: 683 VG-LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVY 741
V P+ +L+ LC A+ + ++ + G + + V
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA---------------VT 679
Query: 742 HSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR 801
+ C ++ FS + + S + EE+ K I +Y++++
Sbjct: 680 YGC-------------------LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 802 KLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
L +D+A +F + L P+ Y ++ G+ GR EA ML+ G P
Sbjct: 721 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Query: 861 PE 862
+
Sbjct: 781 DD 782
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/546 (21%), Positives = 222/546 (40%), Gaps = 41/546 (7%)
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
D+A+ F++ S P V ++ + R + V + + I N+ T+N
Sbjct: 70 DDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ FC+ A + + G P+ + LI L +G EA ++ G
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
PD T++++ N +CR DLL ER + TYS + +LCR G ++
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 505 LMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+ +++ + S Y ++ G K+ + + A LL +M + ++ +L
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 562 LHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
+ + EM+T G P+ +N+ +DG N+ A + +LM RN +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 621 SSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFE 679
+ ++K Y +R+ D ++ F +I + +V+ + Y+ ++ G C+S K +A EL E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPE 739
M+ G+ P + Y +L+ LC + +A+ E
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKAL-----------------------------E 459
Query: 740 VYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLL 799
++ DL++ K L M T II +V + L K ++ TY ++
Sbjct: 460 IFE---DLQKSKMD--LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514
Query: 800 MRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ L + +A L +M + G PN TY + G + + + EM GF
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 859 NPPENT 864
+ ++
Sbjct: 575 SADASS 580
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 204/518 (39%), Gaps = 50/518 (9%)
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
D L +M + P++V + + ++ L+ G++ N Y I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI--YTLNI 128
Query: 422 LTLCWDGCPKE--AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
+ C+ C K AY VL GY PD TF+TL L E K+ E L+D +E
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIKSNRGD 533
P+ TY+ V+ +CR+G D L L K+ R F+Y+ +I + D
Sbjct: 189 CQPDVVTYNSIVNGICRSG---DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 534 IAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFI 592
A L EM+ KG + +Y ++ L L +M++ P+ FN +
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 593 DGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN-DIRHQVV 651
D + K A E+++ M GI N + +M Y R+S+A + +R++
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 652 VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ +I G C + D +++ + K GL + Y +LVQ C +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK------- 418
Query: 712 VNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGC 771
+ + E+ LF M+S G D +++
Sbjct: 419 IKLAEE-------------LFQEMVS--------------HGVLPDVMTYGILLDGLCDN 451
Query: 772 LRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTY 830
++ +++ E+L + I Y ++ + ++ A LF + +G++PN TY
Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY 511
Query: 831 GLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+M G G EA + +M + G P + T N +
Sbjct: 512 TVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/481 (20%), Positives = 191/481 (39%), Gaps = 8/481 (1%)
Query: 154 LVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILL 213
LV DF + H + ++ + K A +LG++ G + D ++ L+
Sbjct: 106 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 165
Query: 214 NSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
L + V+ +++ G + + T ++ +C+ G A L + +
Sbjct: 166 KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVK 225
Query: 273 LHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEF 330
S +I LC + A+ L E T + Y +RGL + G+ ++
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
+ E VP + +N+L+ ++E +L++ EL +M I PN++T N ++ +C
Sbjct: 286 LKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
+ A + + + SP+ + + LI C + +V R+ S G +
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
T+S L C+ KI +L + +P+ TY + LC G++E + DL
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 511 DKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNP 567
K Y +I G K + + A L + KG + +Y ++ L +
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 568 RTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
L +M G P+ +N+ I + + ++ E M+ G +ASS +V
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMV 584
Query: 627 M 627
+
Sbjct: 585 I 585
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 143/327 (43%), Gaps = 4/327 (1%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
+++LV G AGK + LL M + + + +++LL+ + + + ++
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 234 MRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
RG ++ T ++ C Q RL EA L+ +V + + LI C R +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 293 RAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
+++ + NA Y + ++G Q G++ A E F Q+ S G +P + Y IL
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF-QEMVSHGVLPDVMTYGIL 444
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ L +L+ E+ D+ ++ + +V ++ CK G V+ A LF S G+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
PN M Y +I LC G EA +LR G P+ T++TL A R+ +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRA 497
L++ F ++S+ + L A
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLSA 591
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/477 (22%), Positives = 194/477 (40%), Gaps = 57/477 (11%)
Query: 300 EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
+ G SL ++ + V + G G+L++AL + P V YN ++ + ++ R
Sbjct: 197 KIGVSLNVQ-TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGR 255
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
L D+ ELL+DM + + PN VT N ++ +CKLG + A ++ Q + P+ Y
Sbjct: 256 LSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNI 315
Query: 420 LILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA--------------------- 458
LI LC G +E ++ + PD T++TL +
Sbjct: 316 LINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG 375
Query: 459 --------------LCRECKID----EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
LC+E K + ++ +L+D F P+ TY + A + G +
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDM---HGFSPDIVTYHTLIKAYLKVGDL 432
Query: 501 EDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
M ++ + + + ++ K + D A LL ++G+ + +Y +
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 558 LHCLLHMDNPRTRFFNLLEMMTHGK-----PHCDIFNSFIDGAMHANKPDLAREVFELMQ 612
+ + + LEM K P FNS I G H K +LA E F+ +
Sbjct: 493 IMGFFREE----KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 613 RNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKAD 671
+G++ + S+ ++ Y + R+ A F+N+ I+H N ++ GLCK +
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608
Query: 672 IALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGN 728
AL F L Y ++ C K+ EA +L++ E+ G F N
Sbjct: 609 KALNF-FNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/572 (21%), Positives = 235/572 (41%), Gaps = 47/572 (8%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR---ENRLKD 362
P + + + + + G+ AL+ F QK P + N L+ L+R +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIF-QKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR-SQFGLSPNYMAYKYLI 421
E+ DM + + N+ T N ++ +C G ++ AL + S+F ++P+ + Y ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
+ G + +L G P+R T++ L C+ + E + +++ + +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARL 538
P+ TY+ ++ LC AG + +G + + + + +Y +I G + A +L
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMT-HG-KPHCDIFNSFIDGAM 596
+ +M+ G + + ++ L L + + E++ HG P +++ I +
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTK 655
A E+ M + GI N + ++ + + R++ +A N + +V
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
Y +I+G + +K + ALE+ EM KV + P++ + L+ LC + A+ +
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 716 EKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVS 775
++G L + F+S+I C + R EK EF + S
Sbjct: 548 AESG-----LLPDDSTFNSII----LGYCKEGRVEKAFEFYNES---------------- 582
Query: 776 YSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMA 834
I F D YT N+L+ L M +KA F+ + + E + TY M
Sbjct: 583 ---------IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMI 632
Query: 835 HGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
F + EA + EM +KG P T N
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/505 (22%), Positives = 208/505 (41%), Gaps = 47/505 (9%)
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCP---KE 432
PP+ + L + G VAL++F + L PN + L++ L
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 433 AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD-FALERRFMPNSSTYSRFV 491
A V G + +TF+ L N C E K+++ +L+ E + P++ TY+ +
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 492 SALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
A+ + GR+ D + D+ K V R +Y ++ G+ K A +++ MK+
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLARE 606
+Y +++ L + + R L++ M K D+ +N+ IDG AR+
Sbjct: 308 PDLCTYNILINGLCNAGSMR-EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI--RHQVVVSTKLYNRMIVGL 664
+ E M+ +G+ N + + +K + + R ++ H Y+ +I
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
K ALE+ EM + G+ + ++ LC ++ EA NL+N K G
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG----- 481
Query: 725 FLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEEL 784
I EV + TLI+G F +V +++ +E+
Sbjct: 482 ----------FIVDEVTYG------------------TLIMGFFRE-EKVEKALEMWDEM 512
Query: 785 IAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRK 843
+ T+N L+ L HH + A E FD + + GL P+ T+ + G+ GR
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 844 DEAKRWVHEMLKKGFNPPENTRNVI 868
++A + +E +K F P T N++
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNIL 597
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 194/441 (43%), Gaps = 25/441 (5%)
Query: 138 TFVAIFRILS----CARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHL 193
T+ I + +S + L+ L+ D ++ P+R Y++ LV GY G A +
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKN---GLVPNRVTYNN-LVYGYCKLGSLKEAFQI 297
Query: 194 LGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCK 252
+ M+ + D Y+IL+N L + +++ ++ +T +I +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 253 QGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE----RAVELVSEFGTSLPLE 308
G EA + + G + ++ + + LC+ + E + ELV G S P
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS-PDI 416
Query: 309 NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLM 368
Y I+ ++ G L ALE R+ +G + N ++ L +E +L + + LL
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMRE-MGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
++ + VT ++ F + V+ ALE+++ + ++P + LI LC G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
+ A + +G PD TF+++ C+E ++++ ++ + +++ F P++ T +
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 489 RFVSALCRAGRVE------DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEM 542
++ LC+ G E + + ++D VT Y MI F K + A LL EM
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDTVT----YNTMISAFCKDKKLKEAYDLLSEM 651
Query: 543 KEKGYELKRSSYRHVLHCLLH 563
+EKG E R +Y + L+
Sbjct: 652 EEKGLEPDRFTYNSFISLLME 672
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 138/342 (40%), Gaps = 26/342 (7%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDV 227
P YH TL+ Y G AL ++ M +G+ ++ + +L++L + +
Sbjct: 414 PDIVTYH-TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 228 IANQICMRGY-ESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC 286
+ N RG+ +T +I ++ ++E+A + + S + LIG LC
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 287 ESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
+ E A+E E S LP ++ + I G + GR+++A EF+ + F P
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI-KHSFKPDN 591
Query: 345 VRYNILIGRLLRE---NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
NIL+ L +E + + + L++ E + VT N ++ FCK + A +L
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREV----DTVTYNTMISAFCKDKKLKEAYDL 647
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT-GYFPDRRTFSTLANALC 460
+ + GL P+ Y I L DG E +L+ SG G T N
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPAT 707
Query: 461 RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
E K + YS + LC GR+++
Sbjct: 708 SESK-------------EELNTEAIAYSDVIDELCSRGRLKE 736
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 150/636 (23%), Positives = 259/636 (40%), Gaps = 71/636 (11%)
Query: 122 FFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFDFLRDFRSCSFPHRARYHDTL 177
FF+WA +Q + + + A+ ILS AR L+ LV D L R P +
Sbjct: 92 FFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNS-RCFMSPGAFGF---F 147
Query: 178 VVGYAIAGKPDIALHLLGRMRFQGLDL-DGFGYHILLNSLAENNCYNAFDVIANQICMRG 236
+ AG D A + R+R GL + + + Y+ LL +++++N + V A MR
Sbjct: 148 IRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRD 207
Query: 237 YESH---MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
H T V++ C G+ E A + N ++ G L + L+ C+ + ++
Sbjct: 208 CGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGW-LDEHISTILVVSFCKWGQVDK 266
Query: 294 AVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A EL+ N Y V I G V+ R+D+A + F + R G Y++LI
Sbjct: 267 AFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMR-RMGMNADIALYDVLI 325
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG----MVDVALELFNSRSQ 407
G L + L+ L +++ + IPP+ + +LC F + + +V + + +S
Sbjct: 326 GGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV 385
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT------------------GYFPDR 449
+ YK L + EAY +++ G PD
Sbjct: 386 M------LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDS 439
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
+ S + N L + K+D LL ++ +P Y+ + +C+ GR E+ + G+
Sbjct: 440 DSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGE 499
Query: 510 LDKVTARFSYAKM--IMGFIKSNRGDI--AARLLVEMKEKGYE--LKRSSY--------- 554
+ S + I G + + R D A LL +M+ G+E +K +++
Sbjct: 500 MKDAGVEPSQFTLNCIYGCL-AERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENG 558
Query: 555 RHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRN 614
R V C D F H + IDG + D E+F + N
Sbjct: 559 RAVDACKYLDDVAGEGFLG----------HMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 615 GIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST-KLYNRMIVGLCKSDKADIA 673
G + + +++K+ ++ R +A FN++ + + T YN MI G CK + D
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 674 LELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAV 709
L M + NP + Y L+ LC+ R EA+
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI 704
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 131/587 (22%), Positives = 243/587 (41%), Gaps = 48/587 (8%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN--RLKDVYELL 367
A+G +IR L G +DEA F + R+ VP YN L+ + + N ++ V L
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARL 202
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
+M + + T+ VL +C G + AL +FN G +++ L+++ C
Sbjct: 203 KEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKW 261
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS--S 485
G +A+ ++ + +T+ L + +E +ID+ + L F RR N+ +
Sbjct: 262 GQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQL--FEKMRRMGMNADIA 319
Query: 486 TYSRFVSALCRAGRVEDGYLM------------RGDLDKVTARFSYAKMIMGFIKSNRGD 533
Y + LC+ +E + RG L K+ FS + + GD
Sbjct: 320 LYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGD 379
Query: 534 IAARLLVEMKEKGYE------LKRSSYRHVLHCLLHMDNPR-TRFFNLLEMMTHGK---P 583
I + ++ + + +E L +Y + + + + ++ + LL+ H K P
Sbjct: 380 IDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLK--DHNKAILP 437
Query: 584 HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
D + I+ + ANK D+A + + +NG++ +++ + R ++L+
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 644 NDIRHQVVVSTKLYNRMIVGLCKSDKADI--ALELCFEMLKVGLNPSIECYEVLVQKLCS 701
+++ V ++ I G C +++ D AL+L +M G P I+ LV+KLC
Sbjct: 498 GEMKDAGVEPSQFTLNCIYG-CLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCE 556
Query: 702 LKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE------KEGEF 755
R +A ++ G FLG+++ + I + + VD E G
Sbjct: 557 NGRAVDACKYLDDVAGEG-----FLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC 611
Query: 756 LDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACEL 814
D ++I A R + E+++K + TYN ++ ++D+
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 815 FDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAK-RWVHEMLKKGFNP 860
RM + P+ TY + HG GR EA RW +EM K P
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRW-NEMKGKDCYP 717
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 37/316 (11%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN-NCYNAFDVIANQI 232
++ ++ G G+ + +L LLG M+ G++ F + + LAE + A D++ ++
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLL-KKM 535
Query: 233 CMRGYESHMTN-VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
G+E + + ++K LC+ GR +A +L+ + G G +G + S
Sbjct: 536 RFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEG----------FLGHMVAST-- 583
Query: 292 ERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
I GL++ +D LE FR + G P + Y++LI
Sbjct: 584 ---------------------AAIDGLIKNEGVDRGLELFRDIC-ANGHCPDVIAYHVLI 621
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
L + R + L +M + P + T N+++ +CK G +D L + +
Sbjct: 622 KALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKN 681
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
P+ + Y LI LC G P EA G +P+R TF L LC+ E
Sbjct: 682 PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVY 741
Query: 472 LDFALERRFMPNSSTY 487
E+ P+S+ Y
Sbjct: 742 FREMEEKEMEPDSAVY 757
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 145/383 (37%), Gaps = 40/383 (10%)
Query: 205 DGFGYHILLNSLAENNCYNAFDVIANQICMRG-YESHMTNVIVIKHLCKQGRLEEAEAHL 263
D I++N L + N + + + I G M +I+ +CK+GR EE+ L
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 264 NGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGR 323
+ +G E + L+ + G L E F A++L+ +
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKK----------------------- 534
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
+ F+ GF P L+ +L R D + L D+ +MV
Sbjct: 535 ----MRFY-------GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
A + K VD LELF G P+ +AY LI LC EA +
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G P T++++ + C+E +ID + E P+ TY+ + LC +GR +
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 504 YL----MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
M+G D R ++ +I G K A EM+EK E + Y ++
Sbjct: 704 IFRWNEMKGK-DCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVS 762
Query: 560 CLLHMDNPRTRFFNLLEMMTHGK 582
L +N F EM+ G+
Sbjct: 763 SFLSSENINAGFGIFREMVHKGR 785
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 168/438 (38%), Gaps = 26/438 (5%)
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+S GY D ++ +A+ L R + + L+ L R + + F+ L AG
Sbjct: 96 ASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAG 155
Query: 499 RVEDGYLMRGDLDK----VTARFSYAKMIMGFIKSNRGDIA---ARLLVEMKEKGYELKR 551
V++ + + + V ++Y ++ KSN + ARL EM++ G+ +
Sbjct: 156 LVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARL-KEMRDCGFHFDK 214
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELM 611
+ VL + E+++ G I + + D A E+ E++
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEML 274
Query: 612 QRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKA 670
+ I N + +++ + + RI A + F +R + LY+ +I GLCK
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 671 DIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL 730
++AL L E+ + G+ P +L + LCS E + V + + L
Sbjct: 335 EMALSLYLEIKRSGIPPD---RGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKS 391
Query: 731 LFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFP 790
LF I ++ H + G + +S ++ I+ + + ++ C
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNY-ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCL- 449
Query: 791 VDIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWV 850
+ + +D A L + Q GL P Y + G GR +E+ + +
Sbjct: 450 ------------VKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 851 HEMLKKGFNPPENTRNVI 868
EM G P + T N I
Sbjct: 498 GEMKDAGVEPSQFTLNCI 515
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 204/473 (43%), Gaps = 40/473 (8%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
++I + L + ++ N +V +G + ++L+ + S+ F + +E +
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 305 LPLE-NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
+ L+ ++G+ I+G + G ++++ + + + GF P V Y LI ++ ++
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF-GFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L +M + + N T ++ K G+ E++ + G+ PN Y ++
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
LC DG K+A++V G + T++TL LCRE K++E ++D PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLV 540
TY+ + C G++ + DL + +Y ++ GF + AA+++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 541 EMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANK 600
EM+E+G KP + ID ++
Sbjct: 398 EMEERGI----------------------------------KPSKVTYTILIDTFARSDN 423
Query: 601 PDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNR 659
+ A ++ M+ G++ + + +++ + ++++A R F + + +YN
Sbjct: 424 MEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 660 MIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
MI+G CK + AL+L EM + L P++ Y +++ LC ++ EA LV
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 4/351 (1%)
Query: 156 FDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNS 215
FD L + F + TL+ G G+ + A L M GL + Y +L+N
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 216 LAENNCY-NAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELH 274
L +N F++ + + T V+ LCK GR ++A + + G +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN 302
Query: 275 RSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFR 332
+ LIG LC + A ++V + + N Y I G G+L +AL R
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 333 QKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKL 392
+ S G P V YNIL+ R+ +++ +M E I P+ VT ++ F +
Sbjct: 363 DLK-SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 393 GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTF 452
++ A++L S + GL P+ Y LI C G EA R+ +S P+ +
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+T+ C+E LL E+ PN ++Y + LC+ + ++
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/482 (21%), Positives = 187/482 (38%), Gaps = 45/482 (9%)
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
+++++ FN G P + YL LT + + + + D +F
Sbjct: 110 LNLSISYFNEMVDNGFVPGSNCFNYL-LTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGI 168
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE---DGYLMRGDLD 511
L C +I++ +DLL E F PN Y+ + C+ G +E D + G L
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 512 KVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
V +Y +I G K+ + +M+E G +Y V++ L D
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK-DGRTKDA 287
Query: 572 FNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
F + + M C+I +N+ I G K + A +V + M+ +GI N +
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT------- 340
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
YN +I G C K AL LC ++ GL+PS+
Sbjct: 341 ---------------------------YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR- 748
Y +LV C A +V E+ G + S + +L + + + LR
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIK-PSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 749 -REKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK-CFPVDIYTYNLLMRKLTHH 806
E+ G D +++I F +++ + + + ++ K C P ++ +++
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 807 DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
+A +L M ++ L PN +Y M + EA+R V +M+ G +P + +
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILS 552
Query: 867 VI 868
+I
Sbjct: 553 LI 554
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 4/277 (1%)
Query: 185 GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-TN 243
G+ A + MR +G+ + Y+ L+ L N + + +Q+ G ++ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT 303
+I C G+L +A + L G + L+ C A ++V E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 304 S--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
P + Y + I + +++A++ R + G VP Y++LI + ++
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQL-RLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
+ L M E PN V N ++ +CK G AL+L + L+PN +Y+Y+I
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
LC + KEA R++ +G P S ++ A
Sbjct: 521 EVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 131/604 (21%), Positives = 231/604 (38%), Gaps = 84/604 (13%)
Query: 274 HRSELSFLIGVLCESNRFERAVELVSEFGTSLPL---------------ENAYGVWIRGL 318
HR L F L L SE G+ + L Y V L
Sbjct: 78 HRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSL 137
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ G L +A E R C +R IGRL + ++MDM + P+
Sbjct: 138 LANGNLQKAHEVMR----------CMLRNFSEIGRL------NEAVGMVMDMQNQGLTPS 181
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
+TMN VL +LG+++ A +F+ S G+ P+ +YK +++ DG +EA R L
Sbjct: 182 SITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLT 241
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
G+ PD T + + ALC ++ ++ F PN ++ + LC+ G
Sbjct: 242 GMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKG 301
Query: 499 RVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYR 555
++ + M ++ + + +++ +I G K + A RL +++ ++ +Y+
Sbjct: 302 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL------VRSDTYK 355
Query: 556 HVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
+H + S I G +K + A +F M+ G
Sbjct: 356 PNVH---------------------------TYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIAL 674
+ N ++ ++ + ++ A N + + + + YN I LCK +A A
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLF-- 732
EL + GL Y +L+Q+ C +A+ K G L N+L+
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 733 ----HSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK- 787
S ++ V L G T +I + + +++ +
Sbjct: 509 CRQKKMKESERLFQLVVSL-----GLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 788 CFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
C P D +TY L+ L M D+AC+L++ M RGL P T +A+ + R D A
Sbjct: 564 CVP-DSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK--RNDSA 620
Query: 847 KRWV 850
+
Sbjct: 621 NAMI 624
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 193/459 (42%), Gaps = 11/459 (2%)
Query: 238 ESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVEL 297
++H ++++ + GRL EA + + G ++ ++ + E E A +
Sbjct: 145 KAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENV 204
Query: 298 VSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
E +P ++Y + + G + G++ EA + + GF+P +++ L
Sbjct: 205 FDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA-DRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM 415
+ M + PN++ +++ CK G + A E+ + G PN
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 416 AYKYLILTLCWDGCPKEAYRV-LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
+ LI LC G ++A+R+ L+ Y P+ T++++ C+E K++ L
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGY-LMR--GDLDKVTARFSYAKMIMGFIKSNR 531
E+ PN +TY+ ++ C+AG Y LM GD + ++Y I K +R
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHGKPHCDIFN 589
A LL + G E +Y ++ C + N FF + T + + N
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK-TGFEADMRLNN 502
Query: 590 SFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RH 648
I K + +F+L+ G++ + ++ Y + I AL++F+++ RH
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 649 QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
V + Y +I GLCK D A +L M+ GL+P
Sbjct: 563 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 9/386 (2%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDV 227
P + Y +V+G GK A L M +G D ++L +L EN N
Sbjct: 215 PDSSSYK-LMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIW 273
Query: 228 IANQICMRGYESHMTNVI-VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC 286
++ G++ ++ N +I LCK+G +++A L +V +G + + + LI LC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 287 ESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
+ E+A L + T P + Y I G + +L+ A F + ++ +G P
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE-QGLFPN 392
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
Y LI + YEL+ M + PN+ T NA + CK A EL N
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
GL + + Y LI C +A + TG+ D R + L A CR+
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYA 520
K+ E L + +P TY+ +S C+ G ++ ++ + V F+Y
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKG 546
+I G K + D A +L M ++G
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMIDRG 598
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 147/380 (38%), Gaps = 5/380 (1%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQICM 234
+L+ G G A +L M G + + + L++ L + AF + +
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 235 RGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
Y+ ++ T +I CK+ +L AE + + G + + + LI C++ F R
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 294 AVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A EL++ G +P Y I L + R EA E K S G V Y ILI
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL-NKAFSCGLEADGVTYTILI 470
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
++N + MN+T +M N ++ FC+ + + LF GL
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
P Y +I C +G A + + G PD T+ +L + LC++ +DE L
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNR 531
+ ++R P T C+ + ++ LDK + ++ +
Sbjct: 591 YEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKK 650
Query: 532 GDIAARLLVEMKEKGYELKR 551
+AA ++ EK R
Sbjct: 651 VGVAALFFQKLLEKDSSADR 670
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 135/351 (38%), Gaps = 19/351 (5%)
Query: 158 FLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLA 217
FL+ RS ++ + +++ GY K + A L RM+ QGL + Y L+N
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 218 ENNCYNAFDVIANQICMRGYESHMTNV----IVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
+ + + N + G E M N+ I LCK+ R EA LN G E
Sbjct: 405 KAGSFGRAYELMN---LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 274 HRSELSFLIGVLCESNRFERAVELV-----SEFGTSLPLENAYGVWIRGLVQGGRLDEAL 328
+ LI C+ N +A+ + F + L N + I + ++ E+
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN---ILIAAFCRQKKMKESE 518
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
F Q S G +P K Y +I +E + + +M P+ T +++
Sbjct: 519 RLF-QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
CK MVD A +L+ + GLSP + L C A +L +
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWI-- 635
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
RT TL LC E K+ LE+ + T + F +A +G+
Sbjct: 636 -RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 130/341 (38%), Gaps = 52/341 (15%)
Query: 574 LLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
+++M G P N ++ A+ + A VF+ M G++ ++SS L++ FR
Sbjct: 170 VMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFR 229
Query: 633 SRRISDALR---------FFNDIRHQVVVSTKL--------------------------- 656
+I +A R F D ++ T L
Sbjct: 230 DGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLIN 289
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV---- 712
+ +I GLCK A E+ EM++ G P++ + L+ LC +A L
Sbjct: 290 FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLV 349
Query: 713 --NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAF-- 768
+ Y+ TS +G + E+ S R +++G F + + T +I
Sbjct: 350 RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS----RMKEQGLFPNVNTYTTLINGHCK 405
Query: 769 SGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNR 827
+G +Y + L + + F +IYTYN + L +A EL ++ GLE +
Sbjct: 406 AGSFGRAYELMNL--MGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADG 463
Query: 828 WTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
TY ++ ++A + M K GF N++
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNIL 504
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 170/809 (21%), Positives = 321/809 (39%), Gaps = 86/809 (10%)
Query: 100 ETFVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPL----V 155
+TF+ ++R G D+G S + G + + V + R+ S A ++ +
Sbjct: 110 DTFLFELVRRG-DEGRGFSVMDLLKAIGEMEQ------SLVLLIRV-STALVKAYANLDM 161
Query: 156 FD-----FLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYH 210
FD F R + S + + L+ +G+ D+ + + GLD D Y
Sbjct: 162 FDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYV 221
Query: 211 ILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIV-----IKHLCKQGRLEEAEAHLNG 265
+++ +L N+ + + +++ + S N V I+ LC + A L
Sbjct: 222 LVVQALWRNDDKEELEKLLSRLLI----SETRNPCVFYLNFIEGLCLNQMTDIAYFLLQP 277
Query: 266 LVGSGKELHRSELSF----LIGVLCESNRFERAVELV---SEFGTSLPLENAYGVWIRGL 318
L + + +S+L ++ LC R E A +V + G P Y I G
Sbjct: 278 LRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGID-PDVYVYSAIIEGH 336
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ + +A++ F + + C + +IL N + Y+L + ET I +
Sbjct: 337 RKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN-FSEAYDLFKEFRETNISLD 395
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
V N KLG V+ A+ELF + G++P+ + Y LI C G +A+ ++
Sbjct: 396 RVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMI 455
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
GTG PD ++ LA L E ++ L R P T++ + L AG
Sbjct: 456 EMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAG 515
Query: 499 RVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
++ L+ +R + A M+ GF + D A + ++ + L +S Y +
Sbjct: 516 ELDKAEAFYESLEH-KSRENDASMVKGFCAAGCLDHAFERFIRLE---FPLPKSVYFTLF 571
Query: 559 HCLLHMDNPRTRFFNLLEMMTH--GKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI 616
L + ++ +LL+ M +P ++ I N ARE FE++ I
Sbjct: 572 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
+ + + +++ +Y R A F D++ + V + +++ +D L++
Sbjct: 632 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN------SDPELDM 685
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM- 735
EM + P + Y +++ + C L +L VY LF M
Sbjct: 686 KREMEAFDVIPDVVYYTIMINRYCHLN------DLKKVYA--------------LFKDMK 725
Query: 736 ---ISPEVYHSCVDLRREKEGEF----------LDSSMLTLIIGAFSGCLRVSYSIQELE 782
I P+V V L+ + E D T++I + + + +
Sbjct: 726 RREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFD 785
Query: 783 ELIAKCFPVDIYTYNLLMR---KLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSN 839
++I D Y L+ K+ + + +A +FDRM + G++P+ Y + G
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGY--LKEAKMIFDRMIESGVKPDVVPYTALIAGCCR 843
Query: 840 HGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+G +A + V EML+KG P + + + +
Sbjct: 844 NGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 128/592 (21%), Positives = 229/592 (38%), Gaps = 71/592 (11%)
Query: 300 EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFR---QKRDSEGFVPCKVRYNILIGRLLR 356
E +LP AY IR +V G LD+ L+ F +R EG R
Sbjct: 82 EGNVTLPSVQAYATVIR-IVCGWGLDKKLDTFLFELVRRGDEG----------------R 124
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELF-NSRSQFGLSPNYM 415
+ D+ + + +M ++ + V+ A++ + L M D A+++F + G +P+
Sbjct: 125 GFSVMDLLKAIGEMEQSLVLLIRVS-TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIK 183
Query: 416 AYKYLILTLCWDGCPKEAYRVLRSSSGTGYF---------PDRRTFSTLANALCRECKID 466
A +LI + G RS G+F D T+ + AL R +
Sbjct: 184 ALNFLISRMIASG---------RSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKE 234
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL-------DKVTARFSY 519
E+ LL L Y F+ LC + Y + L DK +Y
Sbjct: 235 ELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAY 294
Query: 520 AKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC-LLHMDNPRT-RFFNLLEM 577
K++ G R + A ++++M++ G + Y ++ +M+ P+ FN + +
Sbjct: 295 RKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM-L 353
Query: 578 MTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
+ +C I +S + A ++F+ + I + + + + ++
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 638 DALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
+A+ F ++ + + + Y +I G C K A +L EM G P I Y VL
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEV------YHSCVDLRRE 750
L + EA + + E G + T N+++ + + E+ Y S RE
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD--M 808
D+SM+ A GCL ++ E I FP+ Y L L +
Sbjct: 534 N-----DASMVKGFCAA--GCLDHAF-----ERFIRLEFPLPKSVYFTLFTSLCAEKDYI 581
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
KA +L DRM + G+EP + YG + + +A+ + ++ K P
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVP 633
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 131/615 (21%), Positives = 245/615 (39%), Gaps = 52/615 (8%)
Query: 296 ELVSEFGTSLPLENAYGVWIRGLVQGGRL---DEALEFFRQKRDSEGFVPCKVRYNILIG 352
+L+ E GT E+ VW L RL D++L ++ +D V + YN ++
Sbjct: 109 QLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQ-SYNSVLY 167
Query: 353 RLLRENRLKDVYELLMDMNETC----------------------------IPPNMVTMNA 384
+++ DVY+ + D NE I P++V+ N+
Sbjct: 168 HFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ +CKLG VD+A F + + GL P+ ++ LI LC G EA + + G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
PD T++ LA I W+++ L++ P+ TY+ + C+ G ++ G
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 505 LMRGDLD----KVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
++ D+ ++ + + M+ G K+ R D A L +MK G +Y V+H
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 561 LLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
L + + EM P+ + + G AR + + + +G +
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Query: 620 ASSQILVMKSYFRSRRISDALRFFN-DIRHQVVVSTKLYNRMIVGLCKSDKADIALELCF 678
+V+ Y +S I +AL F I + S +N +I G CK+ A ++
Sbjct: 468 IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD 527
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL------- 731
+ GL PS+ Y L+ + L + G T+ +V+
Sbjct: 528 VIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 732 ----FHSMISPEVYHSCVDLRREKEGEFLDSSMLT--LIIGAFSGCLRVSYSIQELEELI 785
+ ++ ++ C R+ E E + +T II +S + LE +
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 786 AKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKD 844
++ TYN+L+ L + + KA + ++ + +++ Y + G +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 845 EAKRWVHEMLKKGFN 859
A + H++L +GFN
Sbjct: 708 MAVKLFHQLLHRGFN 722
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 138/609 (22%), Positives = 241/609 (39%), Gaps = 109/609 (17%)
Query: 188 DIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQICMRGYESHMTNVIV 246
D +L++L +M+ Q L++ Y+ +L E + ++ + I ++ + T V
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK-------NEHTYSTV 193
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVELVSEFGTS 304
+ LC+Q +LE+A L K++ S +SF ++ C+ + A S F T
Sbjct: 194 VDGLCRQQKLEDAVLFLR--TSEWKDIGPSVVSFNSIMSGYCKLGFVDMAK---SFFCTV 248
Query: 305 L-----PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
L P ++ + I GL G + EALE + G P V YNIL
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALEL-ASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
+ +E++ DM + + P+++T +LC C+LG +D+ L L G N +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 420 LILT-LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
++L+ LC G EA + G PD +S + + LC+ K D L D ++
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 479 RFMPNSSTYSRFVSALCRAGR-------------------------VEDGYLMRGDLDKV 513
R +PNS T+ + LC+ G V DGY G +++
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 514 TARF-------------SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
F ++ +I G+ K+ A ++L +K G SY ++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 561 LLHMDNPRTRFFNLLEMMTHGKPHCD-----IFNSFIDGAMHANKPDLARE-VFEL---- 610
+ N ++ EM G P + IF G H N + RE +FE
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 611 ---MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLC- 665
M+ GI + + +++ R + +S A F ++ + + S+ YN +I LC
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 666 -----KSDK-----------------------------ADIALELCFEMLKVGLNPSIEC 691
K+D ++A++L ++L G N SI
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 692 YEVLVQKLC 700
Y ++ +LC
Sbjct: 728 YSAVINRLC 736
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 22/263 (8%)
Query: 619 NASSQILVMKSYFRSRRISDALRF-----FNDIRHQVVVSTKLYNRMIVGLCKSDKADIA 673
N + V+ R +++ DA+ F + DI VV +N ++ G CK D+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS----FNSIMSGYCKLGFVDMA 241
Query: 674 LELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL-- 731
+LK GL PS+ + +L+ LC + EA+ L + K G S N+L
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 732 FH--SMISP--EVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK 787
FH MIS EV +D +G D T+++ + + L++++++
Sbjct: 302 FHLLGMISGAWEVIRDMLD-----KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 788 CFPVD-IYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDE 845
F ++ I ++++ L +D+A LF++M GL P+ Y ++ HG G+ D
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 846 AKRWVHEMLKKGFNPPENTRNVI 868
A EM K P T +
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGAL 439
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 118/305 (38%), Gaps = 14/305 (4%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCY-NAFDVIA 229
+R H L++G G A LL + G LD Y+I+++ A++ C A ++
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 230 NQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
I S T +I CK + EA L+ + G + L+
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 290 RFERAVELVSEF-GTSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQK---------RD-- 336
+ EL E +P N Y V +GL +G + + R++ RD
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
SEG P ++ YN +I L R L + L M + + T N ++ C G +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A S + +S + AY LI C G P+ A ++ G+ R +S +
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Query: 457 NALCR 461
N LCR
Sbjct: 733 NRLCR 737
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 130/566 (22%), Positives = 237/566 (41%), Gaps = 22/566 (3%)
Query: 158 FLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLA 217
F+ + S + L+ G+ G D A+ LL RM G+ D Y +LL L
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 218 ENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLE-EAEAHLNGLVGSGKELHRS 276
+ + VI I G N VI L G +E + E+ L + L
Sbjct: 425 KCHELKYAMVILQSILDNGCG---INPPVIDDL---GNIEVKVESLLGEIARKDANLAAV 478
Query: 277 ELSFLIGVLCESNRFERA---VELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQ 333
L+ + LC + A +E + G + PL +Y I+ L Q +++
Sbjct: 479 GLAVVTTALCSQRNYIAALSRIEKMVNLGCT-PLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 334 KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG 393
++ + FVP Y I++ L ++N + ++ M E + P + ++++ K G
Sbjct: 538 IQELD-FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQG 596
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFS 453
V A E F + G+ P+ +AY +I T +G EA ++ P T++
Sbjct: 597 RVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYT 656
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM---RGDL 510
L + + +++ LD LE PN Y+ + + G + + + G+
Sbjct: 657 VLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Query: 511 DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR 570
D +Y ++ G ++ +++VE ++ + + ++ + N ++
Sbjct: 717 DIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK 776
Query: 571 FFNLLEMMTHGK----PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
F + E++ K P+ + N+ I G A + D A E MQ+ GI+ N + ++
Sbjct: 777 SFAM-EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTIL 835
Query: 627 MKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLN 686
MKS+ + I A+ F + +Y+ ++ GLC + AL L EM K G+N
Sbjct: 836 MKSHIEAGDIESAIDLFEGTNCEP--DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGIN 893
Query: 687 PSIECYEVLVQKLCSLKRYYEAVNLV 712
P+ + YE L+Q LC + EAV +V
Sbjct: 894 PNKDSYEKLLQCLCYSRLTMEAVKVV 919
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 142/696 (20%), Positives = 255/696 (36%), Gaps = 137/696 (19%)
Query: 200 QGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVI--VIKHLCKQGRLE 257
G++LD Y L+ L E + NQ + ++V+ ++ L K R +
Sbjct: 89 NGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFD 148
Query: 258 EAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAV---ELVSEFGTSLPLENAYGVW 314
EA AHL+ ++ SG R+ S ++ LC +RF A E V E G+ G+W
Sbjct: 149 EARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGS--------GLW 200
Query: 315 I-------RGLVQGGRLDEAL-----------------------------------EFFR 332
+ +GL G L+EA+ E
Sbjct: 201 LWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALF 260
Query: 333 QKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKL 392
+ +G+ KV Y L+ ++N + L + M E + N ++ F KL
Sbjct: 261 DHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKL 320
Query: 393 GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP-DRRT 451
GM+D +F+ + G+ N Y +I + C +G A R+ +++G+ +
Sbjct: 321 GMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHC 380
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG-YLMRGDL 510
++ L ++ +D+ DLL L+ +P+ TY + L + ++ +++ L
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 511 DKVTARFSYAKMIMGFIKSNRGDIAAR---LLVEMKEKGYELKRSSYRHVLHCLLHMDNP 567
D I + + G+I + LL E+ K L V L N
Sbjct: 441 DNGCG-------INPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNY 493
Query: 568 RTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
+ +M+ G P +NS I L Q N I+ + +S + +
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKC---------------LFQEN-IIEDLASLVNI 537
Query: 627 MKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLN 686
++ L F D+ ++V + LCK + D A + M ++GL
Sbjct: 538 IQE----------LDFVPDVDTYLIVVNE--------LCKKNDRDAAFAIIDAMEELGLR 579
Query: 687 PSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD 746
P++ Y ++ L R EA + K + S I P
Sbjct: 580 PTVAIYSSIIGSLGKQGRVVEA---EETFAK-------------MLESGIQP-------- 615
Query: 747 LRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH 806
D ++I ++ R+ + + +EE++ +TY +L+
Sbjct: 616 ----------DEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKM 665
Query: 807 D-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHG 841
M+K C+ D+M + GL PN Y + F G
Sbjct: 666 GMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKG 701
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 5/175 (2%)
Query: 294 AVELVSEFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
A+E++ + S+ P + I G GRLDEA + EG VP V Y IL+
Sbjct: 779 AMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHL-ESMQKEGIVPNLVTYTILMK 837
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
+ ++ +L N P+ V + +L C AL L + G++P
Sbjct: 838 SHIEAGDIESAIDLFEGTN---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
N +Y+ L+ LC+ EA +V++ + +P + L LC E K+ E
Sbjct: 895 NKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLRE 949
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 161/833 (19%), Positives = 324/833 (38%), Gaps = 105/833 (12%)
Query: 120 LKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVV 179
++FF+W ++ F H + + I AR +V + + + R L+
Sbjct: 173 MRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILIS 232
Query: 180 GYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYES 239
Y A K L + +MR G +LD Y+I++ SL C +A + E
Sbjct: 233 VYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL----CIAGRGDLALEFYKEMMEK 288
Query: 240 HM-----TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
+ T +++ + K +++ ++ + +V + +L+ C S + + A
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEA 348
Query: 295 VELVSEF-GTSLPLENAY-GVWIRGLVQGGRLDEALEFF----RQKRDSEGFVPCKVRYN 348
+EL+ E + L+ Y + ++GL + R+ +ALE R+K D Y
Sbjct: 349 LELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV------YG 402
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
I+I LR+N + E + ++ PP + T ++ KL + LFN +
Sbjct: 403 IIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIEN 462
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
G+ P+ +A ++ EA++V S G P +++S LCR + DE+
Sbjct: 463 GIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEI 522
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVT------------AR 516
+ + + + +S +S++ + G E +L++ ++ K + A
Sbjct: 523 IKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIK-EIQKRSNSYCDELNGSGKAE 581
Query: 517 FSYAKMIM----------------GFIKSNRGDIAARLLVEMKEKGYE-----LKRSSYR 555
FS + ++ ++ D+ V + +E L++S+ +
Sbjct: 582 FSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQ 641
Query: 556 H----VLHCLLH---MDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVF 608
V+ L H N RFF+ + K + + +N I A R +F
Sbjct: 642 FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLF 701
Query: 609 ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKS 667
M+R G + + +++ Y R+ + A+R F +++ ++ S+ + +I LC+
Sbjct: 702 YEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEK 761
Query: 668 DKADI--ALELCFEMLKVGLNPSIECYEVLVQKLCSLKR--------------------- 704
++ A EM++ G P E + + LC +
Sbjct: 762 KGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVA 821
Query: 705 ---YYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSML 761
Y A+ + E+A L SF G L + H L+R + LD
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL--LQRGDLQKALDKVNS 879
Query: 762 TLIIGA------FSGCLRVSYSIQELEELIAKCFPVD-------IYTYNLLM-RKLTHHD 807
IG ++ + + ++LE+++ C ++ + TY ++ ++
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 808 MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+++A F M +RG P+ TY + + ++A + + EML KG P
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 166/390 (42%), Gaps = 27/390 (6%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFD 157
V+ VLRH G+ + L+FF W G++ + H + ++ C + +R L ++
Sbjct: 646 LVVEVLRHAKIQGN--AVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYE 703
Query: 158 FLRDFRSCSFPHRARYHDT---LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
R + C DT +++ Y G +IA+ M+ GL + L+
Sbjct: 704 MRR--QGCLITQ-----DTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLIT 756
Query: 215 SLAENNCYNAFDVIAN--QICMRGYESHMTNVI-VIKHLCKQGRLEEAEAHLNGLVGSGK 271
L E N + ++ G+ V + LC+ G ++A++ L+ L G
Sbjct: 757 VLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF 816
Query: 272 ELHRSELSFLIGVLCESNRFERAVELVSEFGT--SLPLENAYGVWIRGLVQGGRLDEALE 329
+ + S I LC + E A+ ++ F SL + YG + GL+Q G L +AL+
Sbjct: 817 PVTVA-YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALD 875
Query: 330 FFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFF 389
++ G P Y LI +E +L+ V E M P++VT A++C +
Sbjct: 876 KVNSMKEI-GTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGY 934
Query: 390 CKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDR 449
LG V+ A F + + G SP++ Y I LC ++A ++L G P
Sbjct: 935 MSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERR 479
F T+ L RE K DL AL+++
Sbjct: 995 INFRTVFYGLNREGK----HDLARIALQKK 1020
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 58/378 (15%)
Query: 531 RGDIAARLLVEMKEKGYELKRSSYR-------HVLHCLLHMDNPRTRFFNLLEMMTHGKP 583
RGD +LV M+++ L++ S+R +VL + + RFFN ++
Sbjct: 134 RGD---DVLVSMEDR---LEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSH 187
Query: 584 HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
I+N+ + A A D+ E+ M++NG + + +++ Y ++++I L F
Sbjct: 188 RVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVF 247
Query: 644 NDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL 702
+R + YN MI LC + + D+ALE EM++ G+ + Y++L+ C
Sbjct: 248 EKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLD--CIA 305
Query: 703 KRYYEAVNLVNVYEKAGRRLTSFLGN----VLLFHSMISPEVYHSCVDLRREKEGEF-LD 757
K E V++V R+ + LL +S ++ + +R K E LD
Sbjct: 306 KS--EKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD 363
Query: 758 SSMLTLIIGAF-------------------------------SGCLR---VSYSIQELEE 783
+ +++ SG LR VS ++++ E
Sbjct: 364 AKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEV 423
Query: 784 LIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGR 842
+ P + TY +M+ L +K C LF+ M + G+EP+ + G R
Sbjct: 424 IKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNR 483
Query: 843 KDEAKRWVHEMLKKGFNP 860
EA + M +KG P
Sbjct: 484 VAEAWKVFSSMEEKGIKP 501
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 154/413 (37%), Gaps = 48/413 (11%)
Query: 284 VLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
VL S +ER E + + E V +QG + L FF G+
Sbjct: 621 VLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQG---NAVLRFFSWVGKRNGYKHN 677
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
YN+ I K + L +M T ++ + + G+ ++A+ F
Sbjct: 678 SEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFK 737
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGC--PKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
GL P+ +K LI LC +EA R R +G+ PDR LC
Sbjct: 738 EMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCE 797
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD---KVTARFS 518
+ LD +L + P + YS ++ ALCR G++E+ + + +++
Sbjct: 798 VGNTKDAKSCLD-SLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYT 856
Query: 519 YAKMIMGFIKSNRGDIAARL--LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
Y ++ G ++ RGD+ L + MKE G
Sbjct: 857 YGSIVHGLLQ--RGDLQKALDKVNSMKEIGT----------------------------- 885
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
KP ++ S I + + E + M+ + + ++ Y ++
Sbjct: 886 -----KPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 637 SDALRFFNDIRHQVVVST-KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+A F ++ + K Y++ I LC++ K++ AL+L EML G+ PS
Sbjct: 941 EEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 219/533 (41%), Gaps = 20/533 (3%)
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
Y+ ++ L R+ +L+D L I P++V+ N+++ +CKLG VD+A F +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
+ GL P+ ++ LI LC G EA + + G PD T++ LA I
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD----KVTARFSYAKM 522
W+++ L++ P+ TY+ + C+ G ++ G ++ D+ ++ + + M
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVM 369
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK 582
+ G K+ R D A L +MK G +Y V+H L + + EM
Sbjct: 370 LSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 583 -PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
P+ + + G AR + + + +G + +V+ Y +S I +AL
Sbjct: 430 LPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE 489
Query: 642 FFN-DIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
F I + S +N +I G CK+ A ++ + GL PS+ Y L+
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 701 SLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL-----------FHSMISPEVYHSCVDLRR 749
+ L + G T+ +V+ + ++ ++ C R
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 750 EKEGEFLDSSMLT--LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THH 806
+ E E + +T II +S + LE + ++ TYN+L+ L +
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 807 DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFN 859
+ KA + ++ + +++ Y + G + A + H++L +GFN
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 138/609 (22%), Positives = 241/609 (39%), Gaps = 109/609 (17%)
Query: 188 DIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQICMRGYESHMTNVIV 246
D +L++L +M+ Q L++ Y+ +L E + ++ + I ++ + T V
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK-------NEHTYSTV 193
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVELVSEFGTS 304
+ LC+Q +LE+A L K++ S +SF ++ C+ + A S F T
Sbjct: 194 VDGLCRQQKLEDAVLFLR--TSEWKDIGPSVVSFNSIMSGYCKLGFVDMAK---SFFCTV 248
Query: 305 L-----PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
L P ++ + I GL G + EALE + G P V YNIL
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALEL-ASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
+ +E++ DM + + P+++T +LC C+LG +D+ L L G N +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 420 LILT-LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
++L+ LC G EA + G PD +S + + LC+ K D L D ++
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 479 RFMPNSSTYSRFVSALCRAGR-------------------------VEDGYLMRGDLDKV 513
R +PNS T+ + LC+ G V DGY G +++
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 514 TARF-------------SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
F ++ +I G+ K+ A ++L +K G SY ++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 561 LLHMDNPRTRFFNLLEMMTHGKPHCD-----IFNSFIDGAMHANKPDLARE-VFEL---- 610
+ N ++ EM G P + IF G H N + RE +FE
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 611 ---MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLC- 665
M+ GI + + +++ R + +S A F ++ + + S+ YN +I LC
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 666 -----KSDK-----------------------------ADIALELCFEMLKVGLNPSIEC 691
K+D ++A++L ++L G N SI
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD 727
Query: 692 YEVLVQKLC 700
Y ++ +LC
Sbjct: 728 YSAVINRLC 736
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 22/263 (8%)
Query: 619 NASSQILVMKSYFRSRRISDALRF-----FNDIRHQVVVSTKLYNRMIVGLCKSDKADIA 673
N + V+ R +++ DA+ F + DI VV +N ++ G CK D+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVS----FNSIMSGYCKLGFVDMA 241
Query: 674 LELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL-- 731
+LK GL PS+ + +L+ LC + EA+ L + K G S N+L
Sbjct: 242 KSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 732 FH--SMISP--EVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK 787
FH MIS EV +D +G D T+++ + + L++++++
Sbjct: 302 FHLLGMISGAWEVIRDMLD-----KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 788 CFPVD-IYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDE 845
F ++ I ++++ L +D+A LF++M GL P+ Y ++ HG G+ D
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 846 AKRWVHEMLKKGFNPPENTRNVI 868
A EM K P T +
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGAL 439
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 118/305 (38%), Gaps = 14/305 (4%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCY-NAFDVIA 229
+R H L++G G A LL + G LD Y+I+++ A++ C A ++
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 230 NQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
I S T +I CK + EA L+ + G + L+
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 290 RFERAVELVSEF-GTSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQK---------RD-- 336
+ EL E +P N Y V +GL +G + + R++ RD
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 612
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
SEG P ++ YN +I L R L + L M + + T N ++ C G +
Sbjct: 613 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 672
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A S + +S + AY LI C G P+ A ++ G+ R +S +
Sbjct: 673 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Query: 457 NALCR 461
N LCR
Sbjct: 733 NRLCR 737
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 129/540 (23%), Positives = 222/540 (41%), Gaps = 54/540 (10%)
Query: 348 NILIGRLLRENRLKDVYELLMDM--NETCIPPNMVTMNAVL--CFFCKLGMVDVALELFN 403
N+++ LLR + D +++L +M E+ PPN +T + VL + +L + + L +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
S G+SPN + I +LC + A+ +L + F+ L + L R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY----LMRG----DLDKVTA 515
I M DL+ E + P+ T ++ LC++ RV++ MRG D + + A
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 516 -RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+ +I G K R A LLV MK
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMK------------------------------- 397
Query: 575 LEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
+ P+ +N IDG A K + A+EV M+ + I N + ++ R
Sbjct: 398 --LEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 635 RISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
++ A+ FF D+ + V + Y +I C + A+ +ML+ G +P + Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL--LFHSMISPE-VYHSCVDLRRE 750
L+ LC ++R ++A+ +V ++ G L N+L LF + E VY D+ E
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDM--E 573
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMD 809
KEG+ DS +I F + +E++ + TY ++ + ++D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 810 KACELFDRM-CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+A +LF M + PN Y ++ + FS G +A EM K P T N +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 185/461 (40%), Gaps = 45/461 (9%)
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL- 305
I LCK R A L+ L+ + L + L+ L + R +LV +
Sbjct: 266 ISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 306 -PLENAYGVWIRGLVQGGRLDEALEFF---RQKRDSEGFV--PCKVRYNILIGRLLRENR 359
P G+ I L + R+DEALE F R KR +G V + +N LI L + R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 360 LKDVYELL--MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
LK+ ELL M + E C PN VT N ++ +C+ G ++ A E+ + + + PN +
Sbjct: 386 LKEAEELLVRMKLEERC-APNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
++ +C A G + T+ TL +A C +++ + LE
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAAR 537
P++ Y +S LC+ R D A R
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHD--------------------------------AIR 532
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAM 596
++ ++KE G+ L +Y ++ +N + L +M GK P +N+ I
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND--IRHQVVVST 654
+ + E M+ +G+ ++ V+ +Y + +AL+ F D + +V +T
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 655 KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+YN +I K AL L EM + P++E Y L
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/560 (20%), Positives = 221/560 (39%), Gaps = 80/560 (14%)
Query: 292 ERAVELVSEFGTSLPLENAYGVW----IRGLVQGGRLDEALEFFRQ--KRDSEGFVPCKV 345
E+ + L+S F + N+ VW I L + R + A + K + P
Sbjct: 241 EKIIALISRFSSHGVSPNS--VWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAP--- 295
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
+N L+ L R + + +L++ M+E I P++VT+ ++ CK VD ALE+F
Sbjct: 296 PFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF--- 352
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
E R R+ G D F+TL + LC+ ++
Sbjct: 353 --------------------------EKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 466 DEMWDLL-DFALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDKVTARFSYAKM 522
E +LL LE R PN+ TY+ + CRAG++E + R D++
Sbjct: 387 KEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 523 IMGFIKSNRG-DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
I+G + + G ++A ++M+++G + +Y ++H + N + +M+ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
P I+ + I G + A V E ++ G + + +++ +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVY 566
Query: 641 RFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
D+ + + YN +I K + + +M + GL+P++ Y ++
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSS 759
CS+ EA+ L ++ G HS ++P ++
Sbjct: 627 CSVGELDEALKL---FKDMG------------LHSKVNP------------------NTV 653
Query: 760 MLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKA-CELFDRM 818
+ ++I AFS ++ EE+ K ++ TYN L + L + +L D M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 819 CQRGLEPNRWTYGLMAHGFS 838
++ EPN+ T ++ S
Sbjct: 714 VEQSCEPNQITMEILMERLS 733
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/488 (20%), Positives = 195/488 (39%), Gaps = 76/488 (15%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS 304
I+I LCK R++EA FE+ ++ G
Sbjct: 334 ILINTLCKSRRVDEA----------------------------LEVFEKMRGKRTDDGNV 365
Query: 305 LPLENA-YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
+ ++ + I GL + GRL EA E + + E P V YN LI R +L+
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
E++ M E I PN+VT+N ++ C+ +++A+ F + G+ N + Y LI
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
C ++A G PD + + L + LC+ + + +++ E F +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLV 540
Y+ + C E Y M D++K + +Y +I F K + R++
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 541 EMKEKGYELKRSSYRHVL--HCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHA 598
+M+E G + ++Y V+ +C + + + F + + + P+ I+N
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYN--------- 656
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLY 657
I+ NA S++ AL +++ ++V + + Y
Sbjct: 657 -----------------ILINAFSKL---------GNFGQALSLKEEMKMKMVRPNVETY 690
Query: 658 NRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQK------LCSLKRYYEAVNL 711
N + L + + + L+L EM++ P+ E+L+++ L L+++ + ++
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSV 750
Query: 712 VNVYEKAG 719
+ EKA
Sbjct: 751 ASPTEKAS 758
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 7/321 (2%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIAN 230
A ++ L+ GY AGK + A ++ RM+ + + + ++ + ++ N V
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 231 QICMRGYESHMTNVIVIKHL-CKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
+ G + ++ + + H C +E+A ++ +G LI LC+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 290 RFE---RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
R R VE + E G SL L AY + I ++ E + EG P +
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLL-AYNMLIGLFCDKNNTEKVYEMLTD-MEKEGKKPDSIT 583
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN LI + + V ++ M E + P + T AV+ +C +G +D AL+LF
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 407 -QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
++PN + Y LI G +A + P+ T++ L L + +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 466 DEMWDLLDFALERRFMPNSST 486
+ + L+D +E+ PN T
Sbjct: 704 ETLLKLMDEMVEQSCEPNQIT 724
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 125/596 (20%), Positives = 234/596 (39%), Gaps = 90/596 (15%)
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN-NCYNAFDVIANQICMRGY----ESH 240
KP+ A+ + R+ +G + DG + + + + + + A D++ MRG S
Sbjct: 254 KPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLRE---MRGKLGVPASQ 310
Query: 241 MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVEL--- 297
T VI K+G +EEA ++ +VG G + + L+ C+ N +A++L
Sbjct: 311 ETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNR 370
Query: 298 VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
+ E G + P + + V + + +++A+EF+ + + S P V + +I L+
Sbjct: 371 MEEEGLA-PDKVMFSVMVEWFCKNMEMEKAIEFYMRMK-SVRIAPSSVLVHTMIQGCLKA 428
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
+ E+ D E+ I + N + FCK G VD A Q G+ PN + Y
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFY 487
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
++L C A + G P+ T+S L + + WD+++
Sbjct: 488 NNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA 547
Query: 478 RRFMPNSSTYSRFVSALCRAGRVE--------------------------DGYLMRGDLD 511
F N Y+ ++ LC+ G+ DG++ GD D
Sbjct: 548 SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTD 607
Query: 512 KVTARF-------------SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
+ ++ +I GF KSNR D+A + EMK +L +Y ++
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 559 HCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
++ +T + E+ G P+ ++NS I G + K D A ++++ M +GI
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Query: 618 TNASSQILVMKSYFRSRRISDALRFF----------NDIRHQVVVS-------------- 653
+ + ++ + I+ A + ++I H V+V+
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787
Query: 654 ------------TKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
LY+ +I G + + A L EML+ G+ + +LV
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 124/651 (19%), Positives = 265/651 (40%), Gaps = 76/651 (11%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT-- 303
V+ L + ++EA+ N +V G L+ + E AV++ +
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
+ P + + ++ + L AL+ R+ R G + Y +I ++E +++
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
++ +M IP +++ +++ +CK + AL+LFN + GL+P+ + + ++
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 424 LCWD------------------------------GC-----PKEAYRVLRSSSGTGYFPD 448
C + GC P+ A + S F
Sbjct: 390 FCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDS-----FES 444
Query: 449 RRTFSTLANAL----CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
+ N + C++ K+D L ++ PN Y+ + A CR ++
Sbjct: 445 WIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMD--- 501
Query: 505 LMRGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
L R ++ + F+Y+ +I GF K+ A ++ +M +E Y ++
Sbjct: 502 LARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTII 561
Query: 559 HCLLHMDNPRTRFFNLLEMMTHGKPH---CDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
+ L + ++ +L+ + K + C +NS IDG + D A E + M NG
Sbjct: 562 NGLCKVGQ-TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIAL 674
N + ++ + +S R+ AL ++++ ++ + Y +I G CK + A
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHS 734
L E+ ++GL P++ Y L+ +L + A++L Y+K S ++ + +
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL---YKKMVNDGIS--CDLFTYTT 735
Query: 735 MISPEVYHSCVDLRREKEGEFLDSSMLT------LIIGAFSGCLRVSYSIQELEELIAKC 788
MI + ++L + E LD ++ +++ S + + + LEE+ K
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 789 FPVDIYTYNLLMRKLTHH---DMDKACELFDRMCQRGLEPNRWTYGLMAHG 836
++ Y+ ++ HH ++++A L D M ++G+ + + L+ G
Sbjct: 796 VTPNVLLYSTVIAG--HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 117/572 (20%), Positives = 226/572 (39%), Gaps = 59/572 (10%)
Query: 339 GFVPCKVRYNILIGRLLRENRLK---DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
GF +N L+ +R R+ D + L++D + P + +N VL + ++
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRK---VVPFVPYVNNVLSSLVRSNLI 220
Query: 396 DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
D A E++N G++ + + + L+ + P+EA ++ R G PD FS
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSS-TYSRFVSALCRAGRVEDGYLMRGDLDKVT 514
A C+ + DLL + +P S TY+ + A + G +E+ + ++
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340
Query: 515 ARFSY---AKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL-HMDNPRTR 570
S ++ G+ K N A L M+E+G + + ++ +M+ +
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400
Query: 571 FFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREV----FELMQRNGIMTNASSQILV 626
F + P + ++ I G + A P+ A E+ FE +G M N +I +
Sbjct: 401 EFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCN---KIFL 457
Query: 627 MKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
+ + + ++ A F + + + + YN M++ C+ D+A + EML+ GL
Sbjct: 458 L--FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 686 NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL--------------- 730
P+ Y +L+ K A +++N + + N +
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 731 LFHSMISPEVYH--------------------SCVDLRRE--KEGEFLDSSMLTLIIGAF 768
+ ++I + Y S V+ RE + G+ + T +I F
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Query: 769 SGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNR 827
R+ +++ E+ + +D+ Y L+ +DM A LF + + GL PN
Sbjct: 636 CKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNV 695
Query: 828 WTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFN 859
Y + GF N G+ D A +M+ G +
Sbjct: 696 SVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 159/359 (44%), Gaps = 9/359 (2%)
Query: 158 FLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLA 217
FL+ +++ +++ + D+A + M +GL+ + F Y IL++
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 218 EN-NCYNAFDVIANQICMRGYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGK-ELH 274
+N + NA+DVI NQ+ +E++ + +I LCK G+ +A+ L L+ + +
Sbjct: 531 KNKDEQNAWDVI-NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 275 RSELSFLIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFF 331
+ + +I + + AVE +SE G S P + I G + R+D ALE
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKS-PNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+ + E + Y LI ++N +K Y L ++ E + PN+ N+++ F
Sbjct: 649 HEMKSMELKLDLPA-YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRN 707
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
LG +D A++L+ G+S + Y +I L DG A + G PD
Sbjct: 708 LGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEIL 767
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
L N L ++ + + +L+ ++ PN YS ++ R G + + + + ++
Sbjct: 768 HMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 178/451 (39%), Gaps = 13/451 (2%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDV 227
P H T++ G A P+ AL + F+ GF + + + +A
Sbjct: 413 PSSVLVH-TMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATS 470
Query: 228 IANQICMRGYESHMT--NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ +G E ++ N +++ H C+ ++ A + + ++ G E + S LI
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAH-CRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 286 CESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
++ + A +++++ S E Y I GL + G+ +A E + + +
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
YN +I ++ E +M+E PN+VT +++ FCK +D+ALE+ +
Sbjct: 590 CTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTH 649
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
L + AY LI C K AY + G P+ +++L +
Sbjct: 650 EMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV---EDGYLMRGDLDKVTARFSYA 520
K+D DL + + TY+ + L + G + D Y DL V +
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM 769
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH 580
++ G K + A+++L EMK+K Y V+ N F EM+
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 581 GKPHCD-IFNSFIDGAMHANKPDLAREVFEL 610
G H D +FN + G KP A ++ L
Sbjct: 830 GIVHDDTVFNLLVSG--RVEKPPAASKISSL 858
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 140/615 (22%), Positives = 236/615 (38%), Gaps = 81/615 (13%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+ + G L +A+E + + VP + N L+ L++ RL D ++ +M +
Sbjct: 141 LHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRG 200
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ + ++ C G V+V +L R G PN + Y +I C G + AY
Sbjct: 201 DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAY 260
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRF-------------- 480
V + G+ P TF T+ N C+E LL ER
Sbjct: 261 LVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAK 320
Query: 481 ---------------------MPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR--- 516
P+ +TY+ ++ LC+ G+ E + G LD+ + +
Sbjct: 321 YRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE---VAVGFLDEASKKGLI 377
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL---HMDNPRTR 570
SYA +I + KS DIA++LL++M E+G + +Y ++H L+ HMD+
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 571 FFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
L++ P I+N + G + A+ +F M I+ +A ++ +
Sbjct: 438 KVKLIDRGV--SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 631 FRSRRISDALRFFN-DIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
RS +A + F+ + V V +N MI G C+S D AL M + L P
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR 749
Y ++ + A+ + EK + NV+ + S+I+ +
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK-----PNVVTYTSLINGFCCQGDFKMAE 610
Query: 750 E--KEGEFLD-----SSMLTLI--IGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLM 800
E KE + D + TLI + S L + EL + KC P ++ T+N L+
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELM-MTNKCVPNEV-TFNCLL 668
Query: 801 RKLTHHDMDKA---------------CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDE 845
+ K E F RM G + Y HG
Sbjct: 669 QGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 846 AKRWVHEMLKKGFNP 860
A + +M+KKGF+P
Sbjct: 729 ACMFQDKMVKKGFSP 743
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 155/752 (20%), Positives = 291/752 (38%), Gaps = 80/752 (10%)
Query: 115 DILSCLKFFDW--AGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRS--CSFPHR 170
D+ +K FDW + ++ F+ + ++L+ R+ + D L + R+ H
Sbjct: 76 DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHE 135
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRM-RFQGLDLDGFGYHILLNSLAENNCYNAFDVIA 229
A H ++ YA +G A+ + + D + LL+ L ++ +
Sbjct: 136 ALSH--VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVY 193
Query: 230 NQICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCES 288
+++C RG + + I++K +C +G++E + G G G + + +IG C+
Sbjct: 194 DEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 289 NRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
E A + E +P +G I G + G + + ++ V
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
NI+ + ++ + + C P++ T N ++ CK G +VA+ + S
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDC-KPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
+ GL PN ++Y LI C A ++L + G PD T+ L + L +D
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD-LDK--VTARFSYAKMI 523
+ ++ ++R P+++ Y+ +S LC+ GR L+ + LD+ + + YA +I
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKP 583
GFI+S D A ++ EKG ++ V+H
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKV------DVVH------------------------ 522
Query: 584 HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
N+ I G + D A M ++ + + ++ Y + + ++ A++ F
Sbjct: 523 ----HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 644 -----NDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQK 698
N + VV T L N G C +A E EM L P++ Y L++
Sbjct: 579 RYMEKNKCKPNVVTYTSLIN----GFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 699 LCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDS 758
L E VY + N + F+ ++ V + + E +G
Sbjct: 635 LAKESSTLEKA----VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQ 690
Query: 759 SMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDK-ACELFDR 817
S L FS + + + + YN + L H M K AC D+
Sbjct: 691 SSL------FS---------EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDK 735
Query: 818 MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRW 849
M ++G P+ ++ + HGF G +K+W
Sbjct: 736 MVKKGFSPDPVSFAAILHGFCVVGN---SKQW 764
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 118/550 (21%), Positives = 212/550 (38%), Gaps = 92/550 (16%)
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
EFF F+ RY I N ++DV L + N + ++ VL
Sbjct: 94 EFFSNGFACSSFLKLLARYRIF-------NEIEDVLGNLRNEN---VKLTHEALSHVLHA 143
Query: 389 FCKLGMVDVALELFNSRSQ-FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
+ + G + A+E+++ + + P+ +A L+ L +A +V G
Sbjct: 144 YAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSV 203
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMR 507
D + L +C E K++ L++ + +PN Y+ + C+ G +E+ YL+
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263
Query: 508 GDLDK---VTARFSYAKMIMGFIKSNRGDIAA--RLLVEMKEKGYELKRSSYRHVLHCLL 562
+L + ++ MI GF K GD A RLL E+KE+G L+ S +
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCK--EGDFVASDRLLSEVKERG--LRVSVW-------- 311
Query: 563 HMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAM-HANKPDLAREVFELMQRNGIMTNAS 621
N+ ID H K D A + ++ + A+
Sbjct: 312 ------------------------FLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 622 SQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEM 680
IL+ + ++ A+ F ++ + ++ L Y +I CKS + DIA +L +M
Sbjct: 348 YNILINRLCKEGKK-EVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 681 LKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEV 740
+ G P I Y +L+ L +AVN+ V L +SP+
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNM----------------KVKLIDRGVSPDA 450
Query: 741 -YHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLL 799
++ + K G FL + +L E++ + D Y Y L
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLL-------------------FSEMLDRNILPDAYVYATL 491
Query: 800 MRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ D D+A ++F ++G++ + + M GF G DEA ++ M ++
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 859 NPPENTRNVI 868
P + T + I
Sbjct: 552 VPDKFTYSTI 561
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 94/249 (37%), Gaps = 25/249 (10%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS--EFGT 303
+IK C+ G L+EA A +N + + S +I + A+++ E
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFR--QKRDSEGFVPCKVRYNILIGRLLRENRL- 360
P Y I G G A E F+ Q RD VP V Y LI L +E+
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD---LVPNVVTYTTLIRSLAKESSTL 642
Query: 361 -KDVYELLMDMNETCIPPNMVTMNAVLCFFCKL--------------GMVDVALELFNSR 405
K VY + M C+P N VT N +L F K G + E F+
Sbjct: 643 EKAVYYWELMMTNKCVP-NEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRM 701
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
G S + AY ++ LC G K A G+ PD +F+ + + C
Sbjct: 702 KSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN- 760
Query: 466 DEMWDLLDF 474
+ W +DF
Sbjct: 761 SKQWRNMDF 769
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 224/540 (41%), Gaps = 54/540 (10%)
Query: 348 NILIGRLLRENRLKDVYELLMDM--NETCIPPNMVTMNAVL--CFFCKLGMVDVALELFN 403
N+++ LLR + D +++L +M E+ PPN +T + VL + +L + + L +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
S G+SPN + I +LC + A+ +L + F+ L + L R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY----LMRG----DLDKVTA 515
I M DL+ E + P+ T ++ LC++ RV++ MRG D + + A
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 516 -RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+ +I G K R A LLV MK + C+
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE------------RCV------------- 403
Query: 575 LEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
P+ +N IDG A K + A+EV M+ + I N + ++ R
Sbjct: 404 --------PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 635 RISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
++ A+ FF D+ + V + Y +I C + A+ +ML+ G +P + Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL--LFHSMISPE-VYHSCVDLRRE 750
L+ LC ++R ++A+ +V ++ G L N+L LF + E VY D+ E
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM--E 573
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMD 809
KEG+ DS +I F + +E++ + TY ++ + ++D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 810 KACELFDRM-CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+A +LF M + PN Y ++ + FS G +A EM K P T N +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 186/461 (40%), Gaps = 45/461 (9%)
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL- 305
I LCK R A L+ L+ + L + L+ L + R +LV +
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 306 -PLENAYGVWIRGLVQGGRLDEALEFFRQ---KRDSEGFV--PCKVRYNILIGRLLRENR 359
P G+ I L + R+DEALE F Q KR +G V + +N LI L + R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 360 LKDVYELL--MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
LK+ ELL M + E C+P N VT N ++ +C+ G ++ A E+ + + + PN +
Sbjct: 386 LKEAEELLVRMKLEERCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
++ +C A G + T+ TL +A C +++ + LE
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAAR 537
P++ Y +S LC+ R D A R
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHD--------------------------------AIR 532
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAM 596
++ ++KE G+ L +Y ++ +N + L +M GK P +N+ I
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND--IRHQVVVST 654
+ + E M+ +G+ ++ V+ +Y + +AL+ F D + +V +T
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 655 KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+YN +I K AL L EM + P++E Y L
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/542 (20%), Positives = 213/542 (39%), Gaps = 80/542 (14%)
Query: 292 ERAVELVSEFGTSLPLENAYGVW----IRGLVQGGRLDEALEFFRQ--KRDSEGFVPCKV 345
E+ + L+S F + N+ VW I L + R + A + K + P
Sbjct: 241 EKIIALISRFSSHGVSPNS--VWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAP--- 295
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
+N L+ L R + + +L++ M+E I P++VT+ ++ CK VD ALE+F
Sbjct: 296 PFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF--- 352
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
E R R+ G D F+TL + LC+ ++
Sbjct: 353 --------------------------EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 466 DEMWDLL-DFALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDKVTARFSYAKM 522
E +LL LE R +PN+ TY+ + CRAG++E + R D++
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 523 IMGFIKSNRG-DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
I+G + + G ++A ++M+++G + +Y ++H + N + +M+ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
P I+ + I G + A V E ++ G + + +++ +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 641 RFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
D+ + + YN +I K + + +M + GL+P++ Y ++
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSS 759
CS+ EA+ L ++ G HS ++P ++
Sbjct: 627 CSVGELDEALKL---FKDMG------------LHSKVNP------------------NTV 653
Query: 760 MLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKA-CELFDRM 818
+ ++I AFS ++ EE+ K ++ TYN L + L + +L D M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 819 CQ 820
+
Sbjct: 714 VE 715
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 128/312 (41%), Gaps = 7/312 (2%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIAN 230
A ++ L+ GY AGK + A ++ RM+ + + + ++ + ++ N V
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 231 QICMRGYESHMTNVIVIKHL-CKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
+ G + ++ + + H C +E+A ++ +G LI LC+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 290 RFE---RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
R R VE + E G SL L AY + I ++ E + EG P +
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLL-AYNMLIGLFCDKNNAEKVYEMLTD-MEKEGKKPDSIT 583
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN LI + + V ++ M E + P + T AV+ +C +G +D AL+LF
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 407 -QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
++PN + Y LI G +A + P+ T++ L L + +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 466 DEMWDLLDFALE 477
+ + L+D +E
Sbjct: 704 ETLLKLMDEMVE 715
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 170/396 (42%), Gaps = 41/396 (10%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+ G G R+ +A+ Q + G+ P V + LI L N+ + L+ M +
Sbjct: 155 LNGFCHGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
P++VT AV+ CK G D+AL L N + N + Y +I +LC +A
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
+ G P+ T+S+L + LC + + LL +ER+ PN T+S + A
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 495 CRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
+ G++ + ++ K + F+Y+ +I GF +R A ++L M K
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK------ 387
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELM 611
CL P+ +N+ I+G A + D E+F M
Sbjct: 388 -------DCL---------------------PNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 612 QRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKA 670
+ G++ N + ++ +F++R +A F + V L YN ++ GLCK+ K
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 671 DIALELCFEML-KVGLNPSIECYEVLVQKLCSLKRY 705
A+ + FE L + + P I Y ++++ +C ++
Sbjct: 480 AKAM-VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 188/435 (43%), Gaps = 22/435 (5%)
Query: 281 LIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGF 340
L GV+ +S F +E S+ +++ N + + I F +K + G
Sbjct: 65 LFGVMAQSRPFPSIIEF-SKLLSAIAKMNKFDLVIS--------------FGEKMEILGI 109
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
YNILI R +RL LL M + P++VT+N++L FC + A+
Sbjct: 110 SHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVA 169
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
L + + G P+ + + LI L EA ++ G PD T+ + N LC
Sbjct: 170 LVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 461 RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---F 517
+ D +LL+ + N YS + +LC+ +D + +++ R
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEM 577
+Y+ +I R A+RLL +M E+ ++ ++ + + L E
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK-KGKLVKAEKLYEE 348
Query: 578 MTHGK--PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRR 635
M P+ ++S I+G ++ A+++ ELM R + N + ++ + +++R
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 636 ISDALRFFNDIRHQVVV-STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEV 694
+ + F ++ + +V +T Y +I G ++ D A + +M+ VG++P+I Y +
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 695 LVQKLCSLKRYYEAV 709
L+ LC + +A+
Sbjct: 469 LLDGLCKNGKLAKAM 483
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 200/498 (40%), Gaps = 48/498 (9%)
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L + L D L M ++ P+++ + +L K+ D+ + G+S N
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
Y LI C A +L GY PD T ++L N C +I + L+D
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDI 534
+E + P++ T++ +I G N+
Sbjct: 174 MVEMGYKPDTVTFT--------------------------------TLIHGLFLHNKASE 201
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD--IFNSFI 592
A L+ M ++G + +Y V++ L + NLL M K + I+++ I
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL-NLLNKMEAAKIEANVVIYSTVI 260
Query: 593 DGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVV 651
D D A +F M+ G+ N + ++ R SDA R +D I ++
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 652 VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ ++ +I K K A +L EM+K ++P+I Y L+ C L R EA +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 712 VNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD----LRRE--KEGEFLDSSMLTLII 765
+ + + L NV+ ++++I+ VD L RE + G ++ T +I
Sbjct: 381 LELMIRK-----DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 766 GAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLE 824
F + +++++ +I TYN+L+ L + + KA +F+ + + +E
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 825 PNRWTYGLMAHGFSNHGR 842
P+ +TY +M G G+
Sbjct: 496 PDIYTYNIMIEGMCKAGK 513
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 187/443 (42%), Gaps = 25/443 (5%)
Query: 446 FPDRRTFSTLANALCREC--------KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
F RR FS + RE ++D+ L + R P+ +S+ +SA+ +
Sbjct: 32 FCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKM 91
Query: 498 GRVEDGYLMRGDLDKVTA----RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
+ D + G+ ++ ++Y +I F + +R +A LL +M + GYE +
Sbjct: 92 NKF-DLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150
Query: 554 YRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQ 612
+L+ H + + +M+ G KP F + I G NK A + + M
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMV 210
Query: 613 RNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKAD 671
+ G + + V+ + AL N + ++ + +Y+ +I LCK D
Sbjct: 211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED 270
Query: 672 IALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVN--VYEKAGRRLTSFLGNV 729
AL L EM G+ P++ Y L+ LC+ R+ +A L++ + K L +F
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA-- 328
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL--IIGAFSGCLRVSYSIQELEELIAK 787
L + + L E +D ++ T +I F R+ + Q LE +I K
Sbjct: 329 -LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 788 -CFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDE 845
C P ++ TYN L+ +DK ELF M QRGL N TY + HGF D
Sbjct: 388 DCLP-NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 846 AKRWVHEMLKKGFNPPENTRNVI 868
A+ +M+ G +P T N++
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNIL 469
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 164/395 (41%), Gaps = 5/395 (1%)
Query: 106 VLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSC 165
VLR G D ++ + F Q R + + F + ++ LV F
Sbjct: 49 VLRTGLSDIELDDAIGLFGVMA-QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 166 SFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAF 225
H ++ L+ + + +AL LLG+M G + D + LLN N +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 226 DVIANQICMRGYESHMTNVIVIKH-LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGV 284
+ +Q+ GY+ + H L + EA A ++ +V G + ++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 285 LCESNRFERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVP 342
LC+ + A+ L+++ + N Y I L + D+AL F + +++G P
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE-MENKGVRP 286
Query: 343 CKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELF 402
+ Y+ LI L R D LL DM E I PN+VT +A++ F K G + A +L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 403 NSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRE 462
+ + PN Y LI C EA ++L P+ T++TL N C+
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 463 CKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
++D+ +L +R + N+ TY+ + +A
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 142/333 (42%), Gaps = 8/333 (2%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMR 235
TL+ G + K A+ L+ RM +G D Y ++N L + + + N++
Sbjct: 188 TLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
Query: 236 GYESHMT-NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
E+++ VI LCK ++A + G + S LI LC R+ A
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 295 VELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQ--KRDSEGFVPCKVRYNIL 350
L+S+ N + I V+ G+L +A + + + KR + P Y+ L
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID---PNIFTYSSL 364
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I +RL + ++L M PN+VT N ++ FCK VD +ELF SQ GL
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
N + Y LI A V + G P+ T++ L + LC+ K+ +
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+ ++ P+ TY+ + +C+AG+ + G
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 130/540 (24%), Positives = 224/540 (41%), Gaps = 54/540 (10%)
Query: 348 NILIGRLLRENRLKDVYELLMDM--NETCIPPNMVTMNAVL--CFFCKLGMVDVALELFN 403
N+++ LLR + D +++L +M E+ PPN +T + VL + +L + + L +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
S G+SPN + I +LC + A+ +L + F+ L + L R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY----LMRG----DLDKVTA 515
I M DL+ E + P+ T ++ LC++ RV++ MRG D + + A
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 516 -RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+ +I G K R A LLV MK + C+
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE------------RCV------------- 403
Query: 575 LEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
P+ +N IDG A K + A+EV M+ + I N + ++ R
Sbjct: 404 --------PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHH 455
Query: 635 RISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
++ A+ FF D+ + V + Y +I C + A+ +ML+ G +P + Y
Sbjct: 456 GLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYY 515
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL--LFHSMISPE-VYHSCVDLRRE 750
L+ LC ++R ++A+ +V ++ G L N+L LF + E VY D+ E
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM--E 573
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMD 809
KEG+ DS +I F + +E++ + TY ++ + ++D
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 810 KACELFDRM-CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+A +LF M + PN Y ++ + FS G +A EM K P T N +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 186/461 (40%), Gaps = 45/461 (9%)
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL- 305
I LCK R A L+ L+ + L + L+ L + R +LV +
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 306 -PLENAYGVWIRGLVQGGRLDEALEFFRQ---KRDSEGFV--PCKVRYNILIGRLLRENR 359
P G+ I L + R+DEALE F Q KR +G V + +N LI L + R
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 360 LKDVYELL--MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
LK+ ELL M + E C+P N VT N ++ +C+ G ++ A E+ + + + PN +
Sbjct: 386 LKEAEELLVRMKLEERCVP-NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
++ +C A G + T+ TL +A C +++ + LE
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAAR 537
P++ Y +S LC+ R D A R
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHD--------------------------------AIR 532
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAM 596
++ ++KE G+ L +Y ++ +N + L +M GK P +N+ I
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND--IRHQVVVST 654
+ + E M+ +G+ ++ V+ +Y + +AL+ F D + +V +T
Sbjct: 593 KHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNT 652
Query: 655 KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+YN +I K AL L EM + P++E Y L
Sbjct: 653 VIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/560 (20%), Positives = 222/560 (39%), Gaps = 80/560 (14%)
Query: 292 ERAVELVSEFGTSLPLENAYGVW----IRGLVQGGRLDEALEFFRQ--KRDSEGFVPCKV 345
E+ + L+S F + N+ VW I L + R + A + K + P
Sbjct: 241 EKIIALISRFSSHGVSPNS--VWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAP--- 295
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
+N L+ L R + + +L++ M+E I P++VT+ ++ CK VD ALE+F
Sbjct: 296 PFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF--- 352
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
E R R+ G D F+TL + LC+ ++
Sbjct: 353 --------------------------EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 466 DEMWDLL-DFALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDKVTARFSYAKM 522
E +LL LE R +PN+ TY+ + CRAG++E + R D++
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 523 IMGFIKSNRG-DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
I+G + + G ++A ++M+++G + +Y ++H + N + +M+ G
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
P I+ + I G + A V E ++ G + + +++ +
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 641 RFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
D+ + + YN +I K + + +M + GL+P++ Y ++
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSS 759
CS+ EA+ L ++ G HS ++P ++
Sbjct: 627 CSVGELDEALKL---FKDMG------------LHSKVNP------------------NTV 653
Query: 760 MLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKA-CELFDRM 818
+ ++I AFS ++ EE+ K ++ TYN L + L + +L D M
Sbjct: 654 IYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Query: 819 CQRGLEPNRWTYGLMAHGFS 838
++ EPN+ T ++ S
Sbjct: 714 VEQSCEPNQITMEILMERLS 733
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 132/321 (41%), Gaps = 7/321 (2%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIAN 230
A ++ L+ GY AGK + A ++ RM+ + + + ++ + ++ N V
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 231 QICMRGYESHMTNVIVIKHL-CKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
+ G + ++ + + H C +E+A ++ +G LI LC+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVR 525
Query: 290 RFE---RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
R R VE + E G SL L AY + I ++ E + EG P +
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLL-AYNMLIGLFCDKNNAEKVYEMLTD-MEKEGKKPDSIT 583
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN LI + + V ++ M E + P + T AV+ +C +G +D AL+LF
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 407 -QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
++PN + Y LI G +A + P+ T++ L L + +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 466 DEMWDLLDFALERRFMPNSST 486
+ + L+D +E+ PN T
Sbjct: 704 ETLLKLMDEMVEQSCEPNQIT 724
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 167/416 (40%), Gaps = 43/416 (10%)
Query: 189 IALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIK 248
+AL +LG+M G + LLN N + + +Q+ GY+ +
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 249 H-LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS--EFGTSL 305
H L + + EA A + +V G + +I LC+ + A+ L++ E G
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
Y I GL + +D+A + F K +++G P YN LI L R D
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLF-NKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 366 LLMDMNETCIPPNMVTMNAVL------------------------CF------------F 389
LL DM E I P++V NA++ CF F
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 390 CKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDR 449
CK V+ +E+F SQ GL N + Y LI A V + G PD
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
T++ L + LC ++ + ++ +R + TY+ + ALC+AG+VEDG+ +
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 510 LDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
L + +Y M+ GF + + A L VEMKE G +Y ++ L
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 198/495 (40%), Gaps = 45/495 (9%)
Query: 212 LLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSG 270
LL+++A+ N ++ + Q+ G ++ T I I + C++ +L A A L ++ G
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 271 KELHRSELSFLIGVLCESNRFERAVELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEA 327
L+ L+ C NR AV LV E G P + + GL Q + EA
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ-PDTVTFTTLVHGLFQHNKASEA 199
Query: 328 LEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLC 387
+ ++ +G P V Y +I L + LL M + I ++V N ++
Sbjct: 200 VALV-ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 388 FFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
CK +D A +LFN G+ P+ Y LI LC G +A R+L P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRF-MPNSSTYSRFVSALCRAGRVEDGYLM 506
D F+ L +A +E K+ E L D ++ + P+ Y+ + C+ RVE+G
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM-- 376
Query: 507 RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHM-- 564
+ EM ++G +Y ++H
Sbjct: 377 ------------------------------EVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 565 -DNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQ 623
DN + F ++ H P +N +DG + + A VFE MQ+ + + +
Sbjct: 407 CDNAQMVFKQMVSDGVH--PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 624 ILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLK 682
++++ ++ ++ D F + + V + Y M+ G C+ + A L EM +
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 683 VGLNPSIECYEVLVQ 697
G P+ Y L++
Sbjct: 525 DGPLPNSGTYNTLIR 539
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 119/560 (21%), Positives = 224/560 (40%), Gaps = 42/560 (7%)
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
R ++Q +LD+A+ F S F P V ++ L+ + + N+ V L M I
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 106
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
N+ T + + +FC+ + +AL + + G P+ + L+ C EA
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
++ GY PD TF+TL + L + K E L++ + + P+ TY ++ LC
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 496 RAGRVEDGYLMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
+ G + + ++K Y +I G K D A L +M+ KG +
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVF-EL 610
+Y ++ CL + L +M+ P FN+ ID + K A +++ E+
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDK 669
++ + + ++K + + +R+ + + F ++ + +V +T Y +I G ++
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
D A + +M+ G++P I Y +L+ LC+ A + V+E +R
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA---LVVFEYMQKR-------- 455
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF 789
D++ LD T +I A +V L K
Sbjct: 456 ----------------DMK-------LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 790 PVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
++ TY +M + ++A LF M + G PN TY + G + +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 849 WVHEMLKKGFNPPENTRNVI 868
+ EM GF +T ++
Sbjct: 553 LIKEMRSCGFAGDASTFGLV 572
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 7/330 (2%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQI 232
+ ++ G G+PD+AL+LL +M ++ D Y+ +++ L + + +AFD+ N++
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF-NKM 276
Query: 233 CMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
+G + + T +I LC GR +A L+ ++ + LI + +
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 292 ERAVELVSEFGTS---LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
A +L E S P AY I+G + R++E +E FR+ G V V Y
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE-MSQRGLVGNTVTYT 395
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
LI + + + M + P+++T N +L C G V+ AL +F +
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
+ + + Y +I LC G ++ + + S S G P+ T++T+ + CR+ +E
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAG 498
L E +PNS TY+ + A R G
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 158/385 (41%), Gaps = 14/385 (3%)
Query: 127 GRQPRFYHTRTTFVAIFRILSCARLRP-LVFDFLRDFRSCSFPHRARYHDTLVVGYAIAG 185
G QP T+ A+ L C R P L + L ++T++ G
Sbjct: 210 GCQPDL----VTYGAVINGL-CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYK 264
Query: 186 KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNV- 244
D A L +M +G+ D F Y+ L++ L ++ + + + + +
Sbjct: 265 HMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN 324
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVELVSEFG 302
+I K+G+L EAE + +V S K +++ LI C+ R E +E+ E
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKS-KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 303 TSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
+ N Y I G Q D A F+Q S+G P + YNIL+ L +
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPDIMTYNILLDGLCNNGNV 442
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+ + M + + ++VT ++ CK G V+ +LF S S G+ PN + Y +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRF 480
+ C G +EA + G P+ T++TL A R+ +L+ F
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Query: 481 MPNSSTYSRFVSALCRAGRVEDGYL 505
++ST+ V+ + GR++ +L
Sbjct: 563 AGDASTFG-LVTNMLHDGRLDKSFL 586
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 187/434 (43%), Gaps = 12/434 (2%)
Query: 285 LCESNRFERAVELVSEFG--TSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVP 342
LC + + A +LV +P + +RGL + +LD+A+ R S G VP
Sbjct: 114 LCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGG-VP 172
Query: 343 CKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL-CFFCKLGMVDVALEL 401
+ YN++IG L ++ ++ LL DM+ + PP+++T N V+ C F G + A+
Sbjct: 173 DTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF-DYGNAEQAIRF 231
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
+ + Q G P + Y L+ +C A VL + G +PD T+++L N CR
Sbjct: 232 WKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCR 291
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA---GRVEDGYLMRGDLDKVTARFS 518
++E+ ++ L N+ TY+ + +LC VE+ + +
Sbjct: 292 RGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT 351
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH--MDNPRTRFFNLLE 576
Y +I G K+ A +M E+ +Y VL + M + LL+
Sbjct: 352 YNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK 411
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
T P +NS IDG A E++ M GI + ++ ++ + R+ +
Sbjct: 412 -NTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 637 SDALRFFNDIRHQV-VVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+A + + ++ + Y +I GLCK + ++A+E+ ML G P Y +
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAI 530
Query: 696 VQKLCSLKRYYEAV 709
V+ + + EAV
Sbjct: 531 VKGVEEMGMGSEAV 544
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 136/277 (49%), Gaps = 3/277 (1%)
Query: 224 AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIG 283
A +V+ + Y +T ++ + C++G LEE + + ++ G EL+ + L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 284 VLCESNRFERAVELVS-EFGTS-LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFV 341
LC ++ E+++ + TS P Y + I GL + L A++FF Q + + +
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK-CL 381
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P V YN ++G + +E + D ELL + TC PP ++T N+V+ K G++ ALEL
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
++ G+ P+ + + LI C +EA +VL+ +S G T+ + LC+
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCK 501
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+ +I+ ++++ L P+ + Y+ V + G
Sbjct: 502 KKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 162/399 (40%), Gaps = 58/399 (14%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE--FGT 303
+++ L + +L++A L +V SG + +IG LC+ A+ L+ +
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
S P Y IR + G ++A+ F++ + + G P + Y +L+ + R
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQN-GCPPFMITYTVLVELVCRYCGSARA 263
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
E+L DM P++VT N+++ + C+ G ++ + GL N + Y L+ +
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 424 LC----WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
LC WD E +L T Y P T++ L N LC+ + D LE++
Sbjct: 324 LCSHEYWD----EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGYLMRGDL----------------------------- 510
+P+ TY+ + A+ + G V+D + G L
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 511 -------------DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
D +T R +I GF ++N + A ++L E +G ++ S+YR V
Sbjct: 440 ELYHQMLDAGIFPDDITRR----SLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLV 495
Query: 558 LHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGA 595
+ L + M+T G KP I+ + + G
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 7/294 (2%)
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
+M+ G P +N I A + E M +G + + V++ F
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 637 SDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
A+RF+ D +++ Y ++ +C+ + A+E+ +M G P I Y L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 696 VQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEF 755
V C E +++ G L + N LL HS+ S E + ++
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL-HSLCSHEYWDEVEEILNIMYQTS 344
Query: 756 LDSSMLT--LIIGAFSGCLRVSYSIQELEELI-AKCFPVDIYTYNLLMRKLTHHDM-DKA 811
+++T ++I +S +I +++ KC P DI TYN ++ ++ M D A
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP-DIVTYNTVLGAMSKEGMVDDA 403
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTR 865
EL + P TY + G + G +A H+ML G P + TR
Sbjct: 404 IELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITR 457
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/461 (19%), Positives = 162/461 (35%), Gaps = 76/461 (16%)
Query: 407 QFGLSPN-------YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
QFGLS + ++ LC +G +A +++ + P + S L L
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSY 519
R ++D+ +L + +P++ TY+ + LC+ G +
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIR------------------ 191
Query: 520 AKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMT 579
A LL +M G +Y V+ C+ N + +
Sbjct: 192 --------------TALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ 237
Query: 580 HGKPHCDI-FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISD 638
+G P I + ++ A EV E M G + + ++ R + +
Sbjct: 238 NGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEE 297
Query: 639 ALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
I H + ++T YN ++ LC + D E+ M + P++ Y +L+
Sbjct: 298 VASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
Query: 698 KLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLD 757
LC + A++ F+ M+ C+ D
Sbjct: 358 GLCKARLLSRAID--------------------FFYQMLE----QKCLP----------D 383
Query: 758 SSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFD 816
++GA S V +I+ L L C P + TYN ++ L M KA EL+
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 443
Query: 817 RMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKG 857
+M G+ P+ T + +GF +EA + + E +G
Sbjct: 444 QMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 28/282 (9%)
Query: 593 DGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVV 652
DG + N + E+ + NG +T+A + VM RH V
Sbjct: 96 DGPITENDEETNNEILHNLCSNGKLTDACKLVEVMA------------------RHNQVP 137
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
+ ++ GL + D+ D A+ + M+ G P Y +++ LC A+ L+
Sbjct: 138 HFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLL 197
Query: 713 NVYEKAGRRLTSFLGNVL---LFHSMISPEVYHSCVDLRREKEGEFLDS-SMLTLIIGAF 768
+G N + +F + + D + F+ + ++L ++ +
Sbjct: 198 EDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRY 257
Query: 769 SGCLRVSYSIQELEEL-IAKCFPVDIYTYNLLMR-KLTHHDMDKACELFDRMCQRGLEPN 826
G R +I+ LE++ + C+P DI TYN L+ ++++ + + GLE N
Sbjct: 258 CGSAR---AIEVLEDMAVEGCYP-DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Query: 827 RWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
TY + H +H DE + ++ M + + P T N++
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNIL 355
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 130/565 (23%), Positives = 222/565 (39%), Gaps = 62/565 (10%)
Query: 279 SFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
S LI L S + A L+S+ T PL Y I + +++AL + R +
Sbjct: 171 SILIHALGRSEKLYEAF-LLSQKQTLTPL--TYNALIGACARNNDIEKALNLIAKMR-QD 226
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVY--ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
G+ V Y+++I L R N++ V L ++ + ++ +N ++ F K G
Sbjct: 227 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 286
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
AL+L GLS +I L G EA + +G P R ++ L
Sbjct: 287 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL---DKV 513
+ + + ++ +R P+ TYS + A AGR E ++ ++ D
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 514 TARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL------HCLLHMDNP 567
F +++++ GF ++L EMK G + R Y V+ +CL H
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 568 RTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
R M++ G +P +N+ ID + +A E+FE M+R G + A++ ++
Sbjct: 467 FDR------MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIM 520
Query: 627 MKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGL-CKSDKADIALELCFEMLKVGL 685
+ SY R D R ++ Q ++ + + +V + KS + + A+E EM VGL
Sbjct: 521 INSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL 580
Query: 686 NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCV 745
PS Y L+ +AVN V G
Sbjct: 581 KPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG-------------------------- 614
Query: 746 DLRREKEGEFLDSSMLTL--IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL 803
L S+L L +I AF R + + L+ + D+ TY LM+ L
Sbjct: 615 ----------LKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 664
Query: 804 THHD-MDKACELFDRMCQRGLEPNR 827
D K +++ M G +P+R
Sbjct: 665 IRVDKFQKVPVVYEEMIMSGCKPDR 689
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 115/501 (22%), Positives = 199/501 (39%), Gaps = 48/501 (9%)
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYES---------- 239
AL+L+ +MR G D Y +++ SL +N I + + +R Y+
Sbjct: 216 ALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK------IDSVMLLRLYKEIERDKLELDV 269
Query: 240 HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS 299
+ N I++ K G +A L +G + L +I L +S R A L
Sbjct: 270 QLVNDIIM-GFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 300 EFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
E S P AY ++G V+ G L +A E + + G P + Y++LI +
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDA-ESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
R + +L +M + PN + +L F G ++ G+ P+ Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC---RECKIDEMWDLLDF 474
+I T C A G PDR T++TL + C R +EM++
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE---- 503
Query: 475 ALERRF-MPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSN 530
A+ERR +P ++TY+ +++ R +D + G + + ++ ++ + KS
Sbjct: 504 AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSG 563
Query: 531 RGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG--KPHCDIF 588
R + A L EMK G + + Y +++ + N +MT KP
Sbjct: 564 RFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR-GLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 589 NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH 648
NS I+ + A V + M+ NG+ + + +MK+ R D
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRV-----------DKFQ 671
Query: 649 QVVVSTKLYNRMIVGLCKSDK 669
+V V +Y MI+ CK D+
Sbjct: 672 KVPV---VYEEMIMSGCKPDR 689
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 162/380 (42%), Gaps = 8/380 (2%)
Query: 487 YSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
YS + AL R+ ++ + +L+ + +Y +I ++N + A L+ +M++ G
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQK--QTLTPLTYNALIGACARNNDIEKALNLIAKMRQDG 227
Query: 547 YELKRSSYRHVLHCLLHMDN-PRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDL 603
Y+ +Y V+ L + L + + K D+ N I G + P
Sbjct: 228 YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIV 662
A ++ + Q G+ ++ + ++ + S R +A F ++R + T+ YN ++
Sbjct: 288 ALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLK 347
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
G K+ A + EM K G++P Y +L+ + R+ A ++ E +
Sbjct: 348 GYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQP 407
Query: 723 TSFLGNVLLFHSMISPEVYHSCVDLRREKE-GEFLDSSMLTLIIGAFSGCLRVSYSIQEL 781
SF+ + LL E + L+ K G D ++I F + +++
Sbjct: 408 NSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTF 467
Query: 782 EELIAKCFPVDIYTYNLLMR-KLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNH 840
+ ++++ D T+N L+ H A E+F+ M +RG P TY +M + + +
Sbjct: 468 DRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Query: 841 GRKDEAKRWVHEMLKKGFNP 860
R D+ KR + +M +G P
Sbjct: 528 ERWDDMKRLLGKMKSQGILP 547
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 173/421 (41%), Gaps = 18/421 (4%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
+ +++G+A +G P AL LLG + GL ++++LA++ + + ++
Sbjct: 273 NDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 235 RGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
G + ++K K G L++AE+ ++ + G S LI + R+E
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 294 AVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A ++ E G P + + G G + + ++ + S G P + YN++I
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK-SIGVKPDRQFYNVVI 451
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ N L M I P+ VT N ++ CK G VA E+F + + G
Sbjct: 452 DTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 412 PNYMAYKYLILTLC----WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
P Y +I + WD + R+L G P+ T +TL + + + ++
Sbjct: 512 PCATTYNIMINSYGDQERWD----DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 468 MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY----LMRGDLDKVTARFSYAKMI 523
+ L+ P+S+ Y+ ++A + G E +M D K + + +I
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK-PSLLALNSLI 626
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-K 582
F + R A +L MKE G + +Y ++ L+ +D + EM+ G K
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 583 P 583
P
Sbjct: 687 P 687
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 141/397 (35%), Gaps = 43/397 (10%)
Query: 110 GGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPH 169
GD L L G + T V+I L+ + + R
Sbjct: 282 SGDPSKALQLLGMAQATGLSAK----TATLVSIISALADSGRTLEAEALFEELRQSGIKP 337
Query: 170 RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN------ 223
R R ++ L+ GY G A ++ M +G+ D Y +L+++ +
Sbjct: 338 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 397
Query: 224 ----AFDVIANQICM---------RGYESHMTNV-----------------IVIKHLCKQ 253
A DV N RG V +VI K
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 254 GRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS--EFGTSLPLENAY 311
L+ A + ++ G E R + LI C+ R A E+ E LP Y
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 312 GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMN 371
+ I R D+ ++ K S+G +P V + L+ + R D E L +M
Sbjct: 518 NIMINSYGDQERWDD-MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 372 ETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPK 431
+ P+ NA++ + + G+ + A+ F + GL P+ +A LI D
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 432 EAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
EA+ VL+ G PD T++TL AL R K ++
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 110 bits (274), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/543 (21%), Positives = 217/543 (39%), Gaps = 82/543 (15%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+L++A++ F S F P V +N L+ +++ + V L M I ++ T
Sbjct: 65 KLNDAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTF 123
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N V+ FC V +AL + + G P+ + L+ C +A ++
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
GY PD ++ + ++LC+ ++++ +D + PN TY+ V+ LC + R D
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 503 GYLMRGDL--DKVTAR-FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
+ D+ K+T +Y+ ++ F+K+ + ++E KE E+ R S
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGK-------VLEAKELFEEMVRMSI----- 291
Query: 560 CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
P ++S I+G ++ D A ++F+LM G + +
Sbjct: 292 ----------------------DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQVVVS-TKLYNRMIVGLCKSDKADIALELCF 678
S ++ + +++R+ D ++ F ++ + +VS T YN +I G ++ D A E
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS 389
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISP 738
+M G++P I Y +L+ LC +A +++F M
Sbjct: 390 QMDFFGISPDIWTYNILLGGLCDNGELEKA--------------------LVIFEDM--- 426
Query: 739 EVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNL 798
+RE + LD T +I +V + L K DI TY
Sbjct: 427 --------QKREMD---LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 799 LMRKLTHHDMDKACE-LFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKG 857
+M L + E L+ +M Q GL N T + G + + +ML G
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLSCG 527
Query: 858 FNP 860
+ P
Sbjct: 528 YAP 530
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 201/488 (41%), Gaps = 53/488 (10%)
Query: 146 LSCARLRPL----VFDFLRDF-RSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQ 200
LS RLR + D D +S FP ++ L+ K D+ + L +M
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFN-RLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 201 GLDLDGFGYHILLNSLAENNCYN---AFDVIANQICMRGYESHMTNV-IVIKHLCKQGRL 256
G+ D + ++I++N C+ A ++ + + GYE + ++ C++ R+
Sbjct: 115 GIRNDLYTFNIVINCFC--CCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNRV 171
Query: 257 EEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIR 316
+A + ++ +V G + P AY I
Sbjct: 172 SDAVSLVDKMVEIGYK---------------------------------PDIVAYNAIID 198
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
L + R+++A +FF++ + +G P V Y L+ L +R D LL DM + I
Sbjct: 199 SLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
PN++T +A+L F K G V A ELF + + P+ + Y LI LC EA ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
G D +++TL N C+ ++++ L +R + N+ TY+ + +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 497 AGRVEDG--YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLV--EMKEKGYELKRS 552
AG V+ + + D ++ +++G + N G++ L++ +M+++ +L
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-GELEKALVIFEDMQKREMDLDIV 436
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELM 611
+Y V+ + + + G KP + + + G ++ M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 612 QRNGIMTN 619
++ G+M N
Sbjct: 497 KQEGLMKN 504
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 192/489 (39%), Gaps = 52/489 (10%)
Query: 209 YHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLV 267
++ LL+++ + Y+ + ++ + G + + T IVI C ++ A + L ++
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 268 GSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEA 327
G E R + L+ C NR AV LV D+
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV--------------------------DKM 181
Query: 328 LEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLC 387
+E G+ P V YN +I L + R+ D ++ ++ I PN+VT A++
Sbjct: 182 VEI--------GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 388 FFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
C A L + + ++PN + Y L+ +G EA + P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMR 507
D T+S+L N LC +IDE + D + + + + +Y+ ++ C+A RVEDG +
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 508 GDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHM 564
++ + V+ +Y +I GF ++ D A +M G +Y +L L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD- 412
Query: 565 DNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
+ + + E M + DI + + I G K + A +F + G+ + +
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 623 QILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIAL--ELCFEM 680
+M + + + ++ + ++ C DI L EL +M
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND---------CTLSDGDITLSAELIKKM 523
Query: 681 LKVGLNPSI 689
L G PS+
Sbjct: 524 LSCGYAPSL 532
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 193/423 (45%), Gaps = 27/423 (6%)
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVT 514
L+ R+ K+++ DL ++ R P+ ++R +SA+ + + + + ++ +
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 515 AR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
R +++ +I F + +A +L +M + GYE R + +++ +
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 572 FNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
+ +M+ G KP +N+ ID + + A + F+ ++R GI N + ++
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 631 FRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
S R SDA R +D I+ ++ + Y+ ++ K+ K A EL EM+++ ++P I
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS----PEVYHSCV 745
Y L+ LC R EA + ++ G L +V+ ++++I+ + +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKG-----CLADVVSYNTLINGFCKAKRVEDGM 350
Query: 746 DLRREKEGEFLDSSMLT---LIIGAFSGCLRVSYSIQELEELIAKC----FPVDIYTYNL 798
L RE L S+ +T LI G F + + + +E ++ DI+TYN+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQ-----AGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 799 LMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKG 857
L+ L + +++KA +F+ M +R ++ + TY + G G+ +EA + KG
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 858 FNP 860
P
Sbjct: 466 LKP 468
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 27/258 (10%)
Query: 626 VMKSYFRSRRISDALRFFNDI-----RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEM 680
++ + R R+SDA+ + + + +V YN +I LCK+ + + A + E+
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA----YNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 681 LKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEV 740
+ G+ P++ Y LV LC+ R+ +A L++ + +++T NV+ + +++ V
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLS--DMIKKKITP---NVITYSALLDAFV 271
Query: 741 YHSCV----DLRREKEGEFLDSSMLT---LIIGAFSGCL--RVSYSIQELEELIAKCFPV 791
+ V +L E +D ++T LI G CL R+ + Q + +++K
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL---CLHDRIDEANQMFDLMVSKGCLA 328
Query: 792 DIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWV 850
D+ +YN L+ ++ +LF M QRGL N TY + GF G D+A+ +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 851 HEMLKKGFNPPENTRNVI 868
+M G +P T N++
Sbjct: 389 SQMDFFGISPDIWTYNIL 406
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 132/303 (43%), Gaps = 7/303 (2%)
Query: 572 FNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
+L M +P I FN + + K D+ + + M+ GI + + +V+
Sbjct: 70 IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINC 129
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ ++S AL + ++ ++ G C+ ++ A+ L +M+++G P
Sbjct: 130 FCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPD 189
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR 748
I Y ++ LC KR +A + E+ G R + + L + + + + L
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR-PNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 749 REKEGEFLDSSMLT--LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH 806
+ + + +++T ++ AF +V + + EE++ DI TY+ L+ L H
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 807 D-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTR 865
D +D+A ++FD M +G + +Y + +GF R ++ + EM ++G T
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 866 NVI 868
N +
Sbjct: 369 NTL 371
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 193/479 (40%), Gaps = 42/479 (8%)
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
+ D +L M + P+++ +L K+ DV + LF G+ P
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
++ +C P A L G+ PD TF++L N C +I++ L D L
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIA 535
F PN TY+ + LC+ + + + +R +Y ++ G + R A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMDN--PRTRFFNLLEMMTHGKPHCDIFNSFID 593
A LL +M ++ E ++ ++ + + +N++ M+ P + S I+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV-YPDVFTYGSLIN 301
Query: 594 GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVV 652
G D AR++F LM+RNG N ++ + +S+R+ D ++ F ++ + VV
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
+T Y +I G C + D+A E+ +M P I Y VL+ LC +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK-------- 413
Query: 713 NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCL 772
EKA +++F M R++E + ++ T+II
Sbjct: 414 --VEKA----------LMIFEYM-------------RKREMD-INIVTYTIIIQGMCKLG 447
Query: 773 RVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTY 830
+V + L +K ++ TY ++ + +A LF +M + G PN Y
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 185/462 (40%), Gaps = 18/462 (3%)
Query: 105 RVLRHGGDDGDILSCLKFFDWAGRQPRFYHTR-----TTFVAIFRILSCARLRPLVFDFL 159
++LR+G L L+F D R H+R F + +++ +V
Sbjct: 53 KILRNG------LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 160 RDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN 219
+ P + ++ ++ +P A LG+M G + D + LLN
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 220 NCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSEL 278
N + +QI G++ ++ T +I+ LCK L A N + +G +
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 279 SFLIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRD 336
+ L+ LCE R+ A L+ + N + I V+ G+L EA E +
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
+ P Y LI L L + ++ M PN V ++ FCK V+
Sbjct: 287 MSVY-PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
+++F SQ G+ N + Y LI C G P A V S PD RT++ L
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
+ LC K+++ + ++ +R N TY+ + +C+ G+VED + + L +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYR 555
+Y MI GF + A L +MKE G+ S Y+
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 182/420 (43%), Gaps = 14/420 (3%)
Query: 212 LLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKH-LCKQGRLEEAEAHLNGLVGSG 270
LL+ +A+ N Y+ + Q+ + G + ++ H +C + A L ++ G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 271 KELHRSELSFLIGVLCESNRFERAVELVSE-FGTSL-PLENAYGVWIRGLVQGGRLDEAL 328
E + L+ C NR E A+ L + G P Y IR L + L+ A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
E F Q + G P V YN L+ L R D LL DM + I PN++T A++
Sbjct: 209 ELFNQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
F K+G + A EL+N Q + P+ Y LI LC G EA ++ G +P+
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRG 508
++TL + C+ ++++ + ++ + N+ TY+ + C GR + + +
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPD---VAQE 384
Query: 509 DLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
+++++R +Y ++ G + + + A + M+++ ++ +Y ++ +
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMC 444
Query: 563 HMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNAS 621
+ F + + G KP+ + + I G A +F+ M+ +G + N S
Sbjct: 445 KLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNES 504
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 145/362 (40%), Gaps = 55/362 (15%)
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM 578
+ +++ K NR D+ L +M+ G + V+HC+ P L +MM
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 579 THG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G +P F S ++G H N+ + A +F+ + G N + +++ ++R ++
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 638 DALRFFNDI-----RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECY 692
A+ FN + R VV YN ++ GLC+ + A L +M+K + P++ +
Sbjct: 206 HAVELFNQMGTNGSRPNVVT----YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 693 EVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR--- 749
L+ + + EA L NV + S +V + S+I+ + +D R
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQ-----MSVYPDVFTYGSLINGLCMYGLLDEARQMF 316
Query: 750 ---EKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH 806
E+ G + + + T +I F RV
Sbjct: 317 YLMERNGCYPNEVIYTTLIHGFCKSKRV-------------------------------- 344
Query: 807 DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
+ ++F M Q+G+ N TY ++ G+ GR D A+ ++M + P T N
Sbjct: 345 --EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 867 VI 868
V+
Sbjct: 403 VL 404
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 187/444 (42%), Gaps = 44/444 (9%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK---DVY-- 364
AY I LV+ G +D A++ F + R S + YN IG L+RE+R + +Y
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHS-SYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 365 ------------------------------ELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
LL DM P++ N L C+
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
V A++ F Q G P+ ++Y LI L G +A + + +G PD + +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 455 LANALCRECKIDEMWDLLDFALER-RFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV 513
L LC K+D ++++ ++ R ++ Y+ +S C+AGR+E ++ + K+
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 514 TAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR 570
+Y ++ + +N A ++ EM G +L SY +L + +P +
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHP-DK 308
Query: 571 FFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
+N + + CD+ +++ I+ A+ A +FE M++ G++ N + ++K
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368
Query: 629 SYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
++ R S A + + + + ++ Y ++ LCKS D A + +M++ + P
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 688 SIECYEVLVQKLCSLKRYYEAVNL 711
Y L+ LC R EA+ L
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKL 452
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/529 (20%), Positives = 209/529 (39%), Gaps = 47/529 (8%)
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE-SHMT 242
+G D A+ + MR + F Y+ + L + + + I + G+ T
Sbjct: 22 SGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFT 81
Query: 243 NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVEL---VS 299
I LCK + + +A L+ + G + + +LC N+ AV+ +
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 300 EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
+ G P +Y + I GL + G++ +A+E + S G P L+ L +
Sbjct: 142 QRGRE-PDVVSYTILINGLFRAGKVTDAVEIWNAMIRS-GVSPDNKACAALVVGLCHARK 199
Query: 360 LKDVYELLMD-MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
+ YE++ + + + + V NA++ FCK G ++ A L + S+ G P+ + Y
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
L+ + K A V+ +G D +++ L CR D+ ++ + +E
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIA 535
R + +YS + CRA Y + ++ + V +Y +I F++ +A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDG 594
+LL +M E G R Y +L L N + +M+ H P +NS I G
Sbjct: 380 KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISG 439
Query: 595 AMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST 654
RS R+++A++ F D++ +
Sbjct: 440 LC-----------------------------------RSGRVTEAIKLFEDMKGKECCPD 464
Query: 655 KLYNRMIV-GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL 702
+L + I+ GL + K A ++ +M+ G + + L++ CS+
Sbjct: 465 ELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 18/349 (5%)
Query: 169 HRARYHDTLVVGYAI-------AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC 221
R R D VV Y I AGK A+ + M G+ D L+ L
Sbjct: 142 QRGREPD--VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 222 YN-AFDVIANQICMRGYESHMTNVI---VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSE 277
+ A++++A +I + ++ V+ +I CK GR+E+AEA + + G E
Sbjct: 200 VDLAYEMVAEEI--KSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 278 LSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGV--WIRGLVQGGRLDEALEFFRQKR 335
+ L+ ++N +RA +++E S +AY ++ + D+ F ++
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
+ GF V Y+ LI R + + Y L +M + + N+VT +++ F + G
Sbjct: 318 EPRGFCDV-VSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS 376
Query: 396 DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
VA +L + ++ GLSP+ + Y ++ LC G +AY V PD ++++L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
+ LCR ++ E L + + P+ T+ + L R ++ Y
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 179/423 (42%), Gaps = 11/423 (2%)
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
S +AN L + ID + D + S Y+RF+ L R R E + D+
Sbjct: 14 SRIAN-LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKP 72
Query: 513 VT---ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
+ F+Y++ I G K + D+ LL +M+ G+ ++ L L +
Sbjct: 73 MGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGF 132
Query: 570 RFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
M+ G+ P + I+G A K A E++ M R+G+ + + ++
Sbjct: 133 AVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVV 192
Query: 629 SYFRSRRISDALRFF-NDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLN 686
+R++ A +I+ +V +ST +YN +I G CK+ + + A L M K+G
Sbjct: 193 GLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCE 252
Query: 687 PSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLF-HSMIS-PEVYHSC 744
P + Y VL+ A ++ ++G +L ++ N LL H +S P+ ++
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF 312
Query: 745 VDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK-L 803
+ E G F D + +I F + + EE+ K +++ TY L++ L
Sbjct: 313 MVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 804 THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPEN 863
+ A +L D+M + GL P+R Y + G D+A ++M++ P
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAI 431
Query: 864 TRN 866
+ N
Sbjct: 432 SYN 434
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 171/397 (43%), Gaps = 36/397 (9%)
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEM 542
Y ++ L ++G +++ + ++ + R F Y + I ++ +R ++A + +M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 543 KEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE-----MMTHG-KPHCDIFNSFIDGAM 596
K G+ L +Y + L + + F+L++ M T G P FN ++D
Sbjct: 71 KPMGFSLIPFTYSRFISGLC-----KVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLC 125
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTK 655
NK A + F M + G + S +++ FR+ +++DA+ +N IR V K
Sbjct: 126 RENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNK 185
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVG-LNPSIECYEVLVQKLCSLKRYYEAVNLVNV 714
++VGLC + K D+A E+ E +K + S Y L+ C R +A L +
Sbjct: 186 ACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSY 245
Query: 715 YEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFS----- 769
K G NVLL Y+ ++ + EG + + + A+S
Sbjct: 246 MSKIGCEPDLVTYNVLL--------NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Query: 770 --GCLRVSYSIQELEELIAKCFP---VDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGL 823
C RVS+ + ++ + P D+ +Y+ L+ + KA LF+ M Q+G+
Sbjct: 298 KRHC-RVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGM 356
Query: 824 EPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
N TY + F G AK+ + +M + G +P
Sbjct: 357 VMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 124/324 (38%), Gaps = 37/324 (11%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++ L+ G+ AG+ + A L M G + D Y++LLN +NN
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN------------- 269
Query: 234 MRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
L+ AE + +V SG +L + L+ C + ++
Sbjct: 270 ---------------------MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 294 AVE-LVSEFGTSLPLE-NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
+V E + +Y I + +A F + R +G V V Y LI
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMR-QKGMVMNVVTYTSLI 367
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
LRE +LL M E + P+ + +L CK G VD A +FN + ++
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
P+ ++Y LI LC G EA ++ G PD TF + L R K+ + +
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 472 LDFALERRFMPNSSTYSRFVSALC 495
D +++ F + + A C
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKASC 511
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 130/576 (22%), Positives = 239/576 (41%), Gaps = 46/576 (7%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQI-- 232
+++ YA +G D LL R+R + + + ++ + + + + A D+ +
Sbjct: 82 SMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDE 141
Query: 233 --CMRGYES--HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCES 288
C R +S + NVI+ + L +G LE + +N + + + +I LC+
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRG-LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 289 NRFERAVELVSEFG--TSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
+RA+E+ LP Y + GL + R+DEA+ + + SEG P V
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ-SEGCSPSPVI 259
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN+LI L ++ L V +L+ +M PN VT N ++ C G +D A+ L
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
PN + Y LI L +A R+L S GY ++ +S L + L +E K +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR------FSYA 520
E L E+ PN YS V LCR G+ + + L+++ A ++Y+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA---KEILNRMIASGCLPNAYTYS 436
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH 580
++ GF K+ + A ++ EM + G + Y ++ L + + +M+T
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496
Query: 581 G-KPHCDIFNSFIDGAMHANKPDLAREVFELM---QRNGIMTNASSQILVMKSYFRSRRI 636
G KP ++S I G D A +++ M + + + +++ + I
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 637 SDALRFFNDIRHQ-----VVVSTKLYN-----------------RMIVGLCKSDKADIAL 674
S A+ N + + V+ N ++V L K + A
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGAC 616
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVN 710
+ ML L P + ++V+++C K+ A++
Sbjct: 617 TIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 155/361 (42%), Gaps = 31/361 (8%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDV 227
P+ Y +TL+ G + GK D A+ LL RM + Y L+N L +
Sbjct: 290 PNEVTY-NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 228 IANQICMRGY--ESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ + + RGY H+ +V+ I L K+G+ EEA + + G + + S L+ L
Sbjct: 349 LLSSMEERGYHLNQHIYSVL-ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 286 CESNRFERAVELVSEFGTSLPLENAY--GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
C + A E+++ S L NAY ++G + G +EA++ +++ D G
Sbjct: 408 CREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE-MDKTGCSRN 466
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
K Y++LI L R+K+ + M I P+ V ++++ C +G +D AL+L++
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 404 S---RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
+ + P+ + Y L+ LC A +L S G PD T +T N L
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Query: 461 REC---------------------KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
+ ++ +++ L + P +ST++ V +C+ +
Sbjct: 587 EKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
Query: 500 V 500
+
Sbjct: 647 I 647
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 188/435 (43%), Gaps = 20/435 (4%)
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERR----FMPNSSTYSRFVSALCRAGRVEDGY- 504
++F+++ N + E + D+ + PN +++ + ALC+ V+
Sbjct: 149 KSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIE 208
Query: 505 LMRGDLDK--VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
+ RG ++ + ++Y ++ G K R D A LL EM+ +G Y ++ L
Sbjct: 209 VFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC 268
Query: 563 HMDNPRTRFFNLLEMM--THGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
+ TR L++ M P+ +N+ I G K D A + E M + + N
Sbjct: 269 KKGD-LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 621 SSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALELCFE 679
+ ++ + RR +DA+R + + + ++ +Y+ +I GL K KA+ A+ L +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL---FHSMI 736
M + G P+I Y VLV LC + EA ++N +G ++ + L+ F + +
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 737 SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTY 796
E ++ +K G + +++I G RV ++ +++ D Y
Sbjct: 448 CEEAVQVWKEM--DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505
Query: 797 NLLMRKLTH-HDMDKACELFDRM-CQR--GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHE 852
+ +++ L MD A +L+ M CQ +P+ TY ++ G A ++
Sbjct: 506 SSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS 565
Query: 853 MLKKGFNPPENTRNV 867
ML +G +P T N
Sbjct: 566 MLDRGCDPDVITCNT 580
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 173/816 (21%), Positives = 314/816 (38%), Gaps = 120/816 (14%)
Query: 118 SCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR--------LRPLVF----------DFL 159
+CL+ F+ A +Q +F + + ILS AR L LV + +
Sbjct: 86 ACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVVWGELV 145
Query: 160 RDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQG-LDLDGFGYHILLNSLAE 218
R F+ SF D ++ YA G ALH+ M G + +L N + +
Sbjct: 146 RVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRK 203
Query: 219 NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGS-GKELHRSE 277
+ A V I T IV+ C+ G +++A S G EL+
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 278 LSFLI---GVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQK 334
+ LI ++ + R + L+SE G S + Y I+G + G ++EA F
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVV-TYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 335 RDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
++ + V + Y +L+ R +++D + +M E + N N+++ +CK G
Sbjct: 323 KEKK-LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
+ A ++F+ + + L P++ Y L+ C G EA ++ P T++
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG------RVEDGYLMRG 508
L R ++ L L+R + + S + AL + G ++ + L RG
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 509 DLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
L T + MI G K + + A +L + ++ C
Sbjct: 502 LL---TDTITLNVMISGLCKMEKVNEAKEILDNV-------------NIFRC-------- 537
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
KP + + G A V E M+R GI ++
Sbjct: 538 -------------KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 629 SYFRSRRISDALRFFNDIRHQVVVST-KLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
F+ R ++ ++R + + T Y +I G C D A CFEM++ G+
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 688 SIE-CYEV---------------LVQKLC----------SLKRYYEAVNLV--------- 712
++ C ++ L+QK+ SLK + EA
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAE 704
Query: 713 NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDS--------SMLTLI 764
+V ++L + N ++++ I+ ++ R+ + L S + LI
Sbjct: 705 SVENSTPKKL--LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 765 IG-AFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRG 822
G A +G + ++++++ E+ K +I TYN L++ L ++D+A L ++ Q+G
Sbjct: 763 HGCAIAGDINKAFTLRD--EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG 820
Query: 823 LEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ PN TY + G G EA R +M++KG
Sbjct: 821 ITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 125/611 (20%), Positives = 237/611 (38%), Gaps = 64/611 (10%)
Query: 313 VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNE 372
+ + + G +D+A+ F ++ S G V YN LI ++ + +L M+E
Sbjct: 230 IVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 373 TCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKE 432
+ N+VT +++ +CK G+++ A +F + L + Y L+ C G ++
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 349
Query: 433 AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVS 492
A RV + G + ++L N C+ ++ E + + P+ TY+ V
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 493 ALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
CRAG V++ + + + V +Y ++ G+ + L M ++G
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 550 KRSSYRHVLHCLLHMD--NPRTRFFN------------LLEMMTHG-------------- 581
S +L L + N + + L +M G
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 582 --------KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
KP + + G A V E M+R GI ++ F+
Sbjct: 530 DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 634 RRISDALRFFNDIRHQVVVST-KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECY 692
R ++ ++R + + T Y +I G C D A CFEM++ G+ ++
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 693 EVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL--FHSMISPEVYHSCVDLRRE 750
+ L L + EA L+ +++ F ++LL + S+ + L+ +
Sbjct: 650 SKIANSLFRLDKIDEACLLL-------QKIVDF--DLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 751 KEGEFLDSS-----------MLTLIIGAFSGCLRVSYSIQELEELIAKC-FPVDIYTYNL 798
K E +++S + + I ++ + + +L++ F D YTY +
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 799 LMRKLT-HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKG 857
L+ D++KA L D M +G+ PN TY + G G D A+R +H++ +KG
Sbjct: 761 LIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKG 820
Query: 858 FNPPENTRNVI 868
P T N +
Sbjct: 821 ITPNAITYNTL 831
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDM--NETCIPPNMVTMNAVLCFFCKL-GMVD 396
VP + YN+ I L + +L+D +L D+ ++ IP +L C + G ++
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTY--TILIHGCAIAGDIN 772
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A L + + G+ PN + Y LI LC G A R+L G P+ T++TL
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNS 484
+ L + + E L + +E+ + S
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 173/401 (43%), Gaps = 39/401 (9%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+LD++L+ F +P ++ L+ + + + V L M IP N+ T
Sbjct: 61 KLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N +L FC+ + +AL + G P+ + + L+ C +A + G
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
GY P+ ++T+ + LC+ ++D DLL+ + P+ TY+ +S LC +GR D
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 503 GYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
M + K F++ +I +K R A EM ++RS
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM------IRRSL------ 287
Query: 560 CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+P ++LL I G ++ D A E+F M G +
Sbjct: 288 ------DPDIVTYSLL----------------IYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQVVV-STKLYNRMIVGLCKSDKADIALELCF 678
+ +++ Y +S+++ ++ F ++ + VV +T Y +I G C++ K ++A E+
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
M+ G++P+I Y VL+ LC + +A+ ++ +K G
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 168/380 (44%), Gaps = 17/380 (4%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+L AL F K G P V + L+ R +R+ D + M PN+V
Sbjct: 131 QLSLALSFL-GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY 189
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
N ++ CK VD AL+L N + G+ P+ + Y LI LC G +A R++ +
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
+PD TF+ L +A +E ++ E + + + R P+ TYS + LC R+++
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 503 GYLMRGDL-------DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYR 555
M G + D VT Y+ +I G+ KS + + +L EM ++G +Y
Sbjct: 310 AEEMFGFMVSKGCFPDVVT----YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 556 HVL--HCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
++ +C N F + + P+ +N + G K + A + MQ+
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRM-VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Query: 614 NGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADI 672
NG+ + + ++++ ++ ++DA + + Q ++ Y M++GL K
Sbjct: 425 NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
Query: 673 ALELCFEMLKVGLNPSIECY 692
A L +M + G+ P+ ECY
Sbjct: 485 ADALFRKMKEDGILPN-ECY 503
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 171/415 (41%), Gaps = 8/415 (1%)
Query: 212 LLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSG 270
LL+++++ Y+ + Q+ M G ++ T I++ C+ +L A + L ++ G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 271 KELHRSELSFLIGVLCESNRFERAVELVSEF-GTSL-PLENAYGVWIRGLVQGGRLDEAL 328
E L+ C +R A+ + + G P Y I GL + ++D AL
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
+ + + +G P V YN LI L R D ++ M + I P++ T NA++
Sbjct: 207 DLL-NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
K G V A E + + L P+ + Y LI LC EA + G FPD
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR--VEDGYLM 506
T+S L N C+ K++ L +R + N+ TY+ + CRAG+ V +
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 507 RGDLDKVTAR-FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
R V +Y ++ G + + + A +L +M++ G + +Y ++ +
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Query: 566 NPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+ + G P + + + G A +F M+ +GI+ N
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 153/372 (41%), Gaps = 41/372 (11%)
Query: 166 SFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNA 224
PH + L+ + + +AL LG+M G + + LLN + Y+A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 225 FDVIANQICMRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIG 283
+ + M GY+ ++ +I LCK +++ A LN + G + LI
Sbjct: 171 LYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS 229
Query: 284 VLCESNRFERAVELVS-------------------------------EFGTSL------P 306
LC S R+ A +VS EF + P
Sbjct: 230 GLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDP 289
Query: 307 LENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYEL 366
Y + I GL RLDEA E F S+G P V Y+ILI + +++ +L
Sbjct: 290 DIVTYSLLIYGLCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 367 LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCW 426
+M++ + N VT ++ +C+ G ++VA E+F G+ PN + Y L+ LC
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
+G ++A +L G D T++ + +C+ ++ + WD+ + MP+ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 487 YSRFVSALCRAG 498
Y+ + L + G
Sbjct: 469 YTTMMLGLYKKG 480
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 142/323 (43%), Gaps = 56/323 (17%)
Query: 576 EMMTHGKPH----CDIF-NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
+M G PH C+I N F + + ++ +L I+T S ++ +
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS----LLNGF 161
Query: 631 FRSRRISDALRFFNDI-----RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
R R+ DAL F+ + + VV+ YN +I GLCKS + D AL+L M K G+
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVI----YNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 686 NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCV 745
P + Y L+ LCS R+ +A +V+ K +V F+++I +CV
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-----REIYPDVFTFNALID-----ACV 267
Query: 746 DLRREKEGE---------FLDSSMLTLIIGAFSGCLRVSYS-IQELEELIA-----KCFP 790
R E E LD ++T + + C+ YS + E EE+ CFP
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM---YSRLDEAEEMFGFMVSKGCFP 324
Query: 791 VDIYTYNLLMR-----KLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDE 845
D+ TY++L+ K H M CE M QRG+ N TY ++ G+ G+ +
Sbjct: 325 -DVVTYSILINGYCKSKKVEHGMKLFCE----MSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 846 AKRWVHEMLKKGFNPPENTRNVI 868
A+ M+ G +P T NV+
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVL 402
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 149/324 (45%), Gaps = 32/324 (9%)
Query: 552 SSYRHVLHC---LLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVF 608
S YR +L + +D+ FF++++ P F+ + K D+ ++
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQ--CRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 609 ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND---IRHQVVVSTKLYNRMIVGLC 665
E MQ GI N + +++ + R ++S AL F + H+ + T + ++ G C
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVT--FGSLLNGFC 162
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
+ D+ AL + +M+ +G P++ Y ++ LC K+ A++L+N EK G
Sbjct: 163 RGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG------ 216
Query: 726 LG-NVLLFHSMISPEVYH----------SCVDLRREKEGEFLDSSMLTLIIGAFSGCLRV 774
+G +V+ ++S+IS SC+ K + D +I A RV
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCM----TKREIYPDVFTFNALIDACVKEGRV 272
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLM 833
S + + EE+I + DI TY+LL+ L + +D+A E+F M +G P+ TY ++
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 834 AHGFSNHGRKDEAKRWVHEMLKKG 857
+G+ + + + EM ++G
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRG 356
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/534 (22%), Positives = 211/534 (39%), Gaps = 77/534 (14%)
Query: 311 YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM 370
+ + +R Q +DEA+E F ++ +GF P N ++ L R NR+++ + DM
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKE-KGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 371 NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCP 430
I N+ T N ++ CK G + A FG+ P + Y L+ G
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 431 KEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRF 490
+ A ++ G+ PD +T++ + + +C E + E +L E +P+S +Y+
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNIL 333
Query: 491 VSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
+ G +E + R ++ K V ++Y +I G N+ + A L+ E++EKG
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 548 ELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLARE 606
L +Y +++ + + F EMMT G +P + S I NK A E
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCK 666
+FE + G+ + LVM N ++ G C
Sbjct: 454 LFEKVVGKGMKPD-----LVM-----------------------------MNTLMDGHCA 479
Query: 667 SDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFL 726
D A L EM + +NP Y L++ LC ++ EA L+ ++ G
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG------- 532
Query: 727 GNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIA 786
I P D +I +S ++ +E+++
Sbjct: 533 ---------IKP------------------DHISYNTLISGYSKKGDTKHAFMVRDEMLS 565
Query: 787 KCFPVDIYTYNLLMRKLT-HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSN 839
F + TYN L++ L+ + + + A EL M G+ PN ++ + SN
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 173/449 (38%), Gaps = 70/449 (15%)
Query: 210 HILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHL------ 263
HIL N NA+ A+ M + T I+I LCK+G+L++A+ L
Sbjct: 195 HILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF 254
Query: 264 ---------NGLVGS--------GKELHRSELSF------------LIGVLCESNRFERA 294
N LV G L SE+ ++ +C R
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV 314
Query: 295 VELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRL 354
+ + E G +P +Y + IRG G L+ A +R + +G VP YN LI L
Sbjct: 315 LREMKEIGL-VPDSVSYNILIRGCSNNGDLEMAFA-YRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
EN+++ L+ ++ E I + VT N ++ +C+ G A L + G+ P
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
Y LI LC +EA + G G PD +TL + C +D + LL
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDI 534
P+ TY+ + LC G+ E+ A+ +MG
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEE-----------------ARELMG--------- 526
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFID 593
EMK +G + SY ++ + + F EM++ G P +N+ +
Sbjct: 527 ------EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580
Query: 594 GAMHANKPDLAREVFELMQRNGIMTNASS 622
G + +LA E+ M+ GI+ N SS
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSS 609
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 167/399 (41%), Gaps = 39/399 (9%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TLV G+++ G+ + A ++ M+ +G D Y+ +L+ + N A +V+
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMC--NEGRASEVLREMKE 320
Query: 234 MRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
+ ++ I+I+ G LE A A+ + +V G
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG----------------------- 357
Query: 294 AVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGR 353
+V F T Y I GL +++ A R+ R+ +G V V YNILI
Sbjct: 358 ---MVPTFYT-------YNTLIHGLFMENKIEAAEILIREIRE-KGIVLDSVTYNILING 406
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
+ K + L +M I P T +++ C+ A ELF G+ P+
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 414 YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
+ L+ C G A+ +L+ PD T++ L LC E K +E +L+
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 474 FALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAKMIMGFIKSN 530
R P+ +Y+ +S + G + +++R ++ + +Y ++ G K+
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 531 RGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
G++A LL EMK +G SS+ V+ + ++D ++
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 208/522 (39%), Gaps = 84/522 (16%)
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM 415
R+N ++++++ L+ ++ + + + ++ C+L MVD A+E F
Sbjct: 132 RKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECF------------- 178
Query: 416 AYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFA 475
YL+ KE G++P T + + L R +I+ W
Sbjct: 179 ---YLM---------KEK----------GFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 476 LERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRG 532
N T++ ++ LC+ G+++ G ++ + +Y ++ GF S RG
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF--SLRG 274
Query: 533 DI-AARLLV-EMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFN 589
I ARL++ EMK KG++ +Y +L M N L EM G P +N
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILS---WMCNEGRASEVLREMKEIGLVPDSVSYN 331
Query: 590 SFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ 649
I G + ++A + M + G++ + ++ F +I A +IR +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 650 -VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEA 708
+V+ + YN +I G C+ A A L EM+ G+ P+ Y L+ LC + EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 709 VNLVNVYEKAGRRLTSFLGNVLL-FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGA 767
L G + + N L+ H I
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAI------------------------------- 480
Query: 768 FSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLT-HHDMDKACELFDRMCQRGLEPN 826
G + ++S+ L+E+ D TYN LMR L ++A EL M +RG++P+
Sbjct: 481 --GNMDRAFSL--LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 827 RWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+Y + G+S G A EML GFNP T N +
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNAL 578
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 176/432 (40%), Gaps = 18/432 (4%)
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G++P T + + L R +I+ W N T++ ++ LC+ G+++
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 504 YLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDI-AARLLV-EMKEKGYELKRSSYRHVL 558
G ++ + +Y ++ GF S RG I ARL++ EMK KG++ +Y +L
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGF--SLRGRIEGARLIISEMKSKGFQPDMQTYNPIL 302
Query: 559 HCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
M N L EM G P +N I G + ++A + M + G++
Sbjct: 303 S---WMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV 359
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALEL 676
+ ++ F +I A +IR + +V+ + YN +I G C+ A A L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL-FHSM 735
EM+ G+ P+ Y L+ LC + EA L G + + N L+ H
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 736 ISPEVYHSCVDLRREKEGEFLDSSMLTL--IIGAFSGCLRVSYSIQELEELIAKCFPVDI 793
I L +E + ++ +T ++ G + + + + E+ + D
Sbjct: 480 IGN--MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 794 YTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHE 852
+YN L+ + D A + D M G P TY + G S + + A+ + E
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 853 MLKKGFNPPENT 864
M +G P +++
Sbjct: 598 MKSEGIVPNDSS 609
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 163/392 (41%), Gaps = 48/392 (12%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G P V + L+ N +KD + M + I ++V ++ CK +V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
LE+ G+SPN + Y LI LC G +A R L P+ TFS L +A
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR-- 516
+ K+ ++ + ++ PN TYS + LC RV++ M LD + ++
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM---LDLMISKGC 184
Query: 517 ----FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+Y+ + GF KS+R D +LL +M ++G + + C
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA------ANTVSC------------ 226
Query: 573 NLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
N+ I G A K DLA VF M NG++ N S +V+ F
Sbjct: 227 ----------------NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFA 270
Query: 633 SRRISDALRFFNDI---RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
+ + AL F + R+ + + T Y MI G+CK+ A +L +++ + P
Sbjct: 271 NGEVEKALSRFEHMQKTRNDLDIIT--YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDF 328
Query: 690 ECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
+ Y +++ +L EA L Y+K R+
Sbjct: 329 KAYTIMIAELNRAGMRTEADALNRFYQKHVRQ 360
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 164/343 (47%), Gaps = 19/343 (5%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMR 235
+LV G+ ++ A+++ G+M G+ D IL+++L C N V A ++ R
Sbjct: 18 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL----CKNRLVVPALEVLKR 73
Query: 236 GYESHMT-NVI----VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCES 288
+ ++ NV+ +I LCK GRL +AE L+ + K+++ + ++F LI +
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM--DSKKINPNVITFSALIDAYAKR 131
Query: 289 NRFERAVELVSEFGTSLPLEN---AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKV 345
+ + V+ V + + ++ Y I GL R+DEA++ S+G P V
Sbjct: 132 GKLSK-VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML-DLMISKGCTPNVV 189
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
Y+ L + +R+ D +LL DM + + N V+ N ++ + + G +D+AL +F
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
+ GL PN +Y ++ L +G ++A T D T++ + + +C+ C +
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAG-RVEDGYLMR 507
E +DL +R P+ Y+ ++ L RAG R E L R
Sbjct: 310 KEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 3/225 (1%)
Query: 279 SFLIGVLCESNRFERAVELVSEFGTSLPLENAY--GVWIRGLVQGGRLDEALEFFRQKRD 336
S L+ C SN + AV + + + + I L + + ALE ++ +D
Sbjct: 17 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 76
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
G P V Y+ LI L + RL D L +M+ I PN++T +A++ + K G +
Sbjct: 77 -RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLS 135
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
++ Q + PN Y LI LC EA ++L G P+ T+STLA
Sbjct: 136 KVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLA 195
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
N + ++D+ LLD +R N+ + + + +AG+++
Sbjct: 196 NGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 44/253 (17%)
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-----IRHQVVVSTKLYNRMIVGLC 665
M + GI + + ++ + S I DA+ I+ VVV T L I LC
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTIL----IDTLC 59
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
K+ ALE+ M G++P++ Y L+ LC R +A RRL
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA----------ERRL--- 106
Query: 726 LGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELI 785
H M S ++ + + + +I A++ ++S + +I
Sbjct: 107 -------HEMDSKKINPNVI--------------TFSALIDAYAKRGKLSKVDSVYKMMI 145
Query: 786 AKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKD 844
+++TY+ L+ L H+ +D+A ++ D M +G PN TY +A+GF R D
Sbjct: 146 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 205
Query: 845 EAKRWVHEMLKKG 857
+ + + +M ++G
Sbjct: 206 DGIKLLDDMPQRG 218
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 126/313 (40%), Gaps = 6/313 (1%)
Query: 126 AGRQPRFYHTRTTFVAIFRILSCARLRPLV--FDFLRDFRSCSFPHRARYHDTLVVGYAI 183
AG+ + R V I + + R +V + L+ + + +L+ G
Sbjct: 36 AGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 95
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-T 242
+G+ A L M + ++ + + L+++ A+ + D + + + ++ T
Sbjct: 96 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT 155
Query: 243 NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFG 302
+I LC R++EA L+ ++ G + S L +S+R + ++L+ +
Sbjct: 156 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 215
Query: 303 TSLPLENAYG--VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
N I+G Q G++D AL F S G +P YNI++ L +
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY-MTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+ M +T +++T ++ CK MV A +LF + P++ AY +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 421 ILTLCWDGCPKEA 433
I L G EA
Sbjct: 335 IAELNRAGMRTEA 347
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 2/185 (1%)
Query: 678 FEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
+M+K+G+ P I LV C +AV + EK G + + +L+ +
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 738 PEVYHSCVDLRREKE-GEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTY 796
V + L+R K+ G + + +I R++ + + L E+ +K ++ T+
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 797 NLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK 855
+ L+ + K ++ M Q ++PN +TY + +G H R DEA + + M+
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 856 KGFNP 860
KG P
Sbjct: 182 KGCTP 186
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 173/419 (41%), Gaps = 49/419 (11%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G + +A++ FR R VP + N+L R+++ N ++ M++ + P N+
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLL-DRMMKLNPTGTIWGFYMEILDAGFPLNVYV 242
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
N ++ FCK G + A ++F+ ++ L P +++ LI C G E +R+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
+ PD T+S L NALC+E K+D L D +R +PN ++ + R G ++
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 502 DGYLMRGDLDKVTAR------FSYAKMIMGFIKSNRGD-IAARLLVE-MKEKGYELKRSS 553
LM+ K+ ++ Y ++ GF K+ GD +AAR +V+ M +G
Sbjct: 363 ---LMKESYQKMLSKGLQPDIVLYNTLVNGFCKN--GDLVAARNIVDGMIRRGL------ 411
Query: 554 YRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
+P + + IDG + A E+ + M +
Sbjct: 412 ----------------------------RPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Query: 614 NGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADI 672
NGI + ++ + R+ DA R + +R + Y M+ CK A
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 673 ALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL 731
+L EM G PS+ Y VL+ LC L + A L++ G N LL
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 163/367 (44%), Gaps = 10/367 (2%)
Query: 201 GLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNV-IVIKHLCKQGRLEEA 259
G L+ + ++IL+N + + + ++I R + + + +I CK G L+E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 260 EAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRG 317
+ + S S LI LC+ N+ + A L E +P + + I G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 318 LVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
+ G +D E + QK S+G P V YN L+ + L ++ M + P
Sbjct: 355 HSRNGEIDLMKESY-QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
+ +T ++ FC+ G V+ ALE+ Q G+ + + + L+ +C +G +A R L
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
R G PD T++ + +A C++ + LL +P+ TY+ ++ LC+
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 498 GRVEDGYLMRG---DLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSY 554
G++++ ++ ++ V +Y ++ G +R +++ ++ E G +SY
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASY 590
Query: 555 RHVLHCL 561
+ +++ L
Sbjct: 591 KSIVNEL 597
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 138/335 (41%), Gaps = 21/335 (6%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
+TL+ GY G D L +M D F Y L+N+L + N + + +++C
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 235 RG-YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
RG + + +I + G ++ + ++ G + + L+ C++
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 294 AVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A +V P + Y I G +GG ++ ALE R++ D G +V ++ L+
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE-IRKEMDQNGIELDRVGFSALV 457
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ +E R+ D L +M I P+ VT ++ FCK G +L G
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL-------ANALCRECK 464
P+ + Y L+ LC G K A +L + G PD T++TL AN+ R +
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQ 577
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
E+ + D A +Y V+ L RA +
Sbjct: 578 KPEIGIVADLA----------SYKSIVNELDRASK 602
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 17/250 (6%)
Query: 625 LVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKV 683
++M + + ISDA + F++I + + T + +N +I G CK D L +M K
Sbjct: 245 ILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKS 304
Query: 684 GLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHS 743
P + Y L+ LC + A L + K G + N ++F ++I +
Sbjct: 305 RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG-----LIPNDVIFTTLIHGHSRNG 359
Query: 744 CVDLRREKEGEFL------DSSMLTLIIGAF--SGCLRVSYSIQELEELIAKCFPVDIYT 795
+DL +E + L D + ++ F +G L + +I ++ +I + D T
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI--VDGMIRRGLRPDKIT 417
Query: 796 YNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEML 854
Y L+ D++ A E+ M Q G+E +R + + G GR +A+R + EML
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 855 KKGFNPPENT 864
+ G P + T
Sbjct: 478 RAGIKPDDVT 487
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
++N ++ CK A ++ E+ K L P++ + L+ C + E L +
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 716 EKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE--KEGEFLDSSMLTLIIGAFSGCLR 773
EK+ R F + L+ +++ L E K G + + T +I S
Sbjct: 302 EKSRTRPDVFTYSALI-NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 774 VSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGL 832
+ + +++++K DI YN L+ + D+ A + D M +RGL P++ TY
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 833 MAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ GF G + A EM + G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGI 446
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 6/320 (1%)
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCP-KEAYRVLRSSS 441
+A++ + + G+ + A+ +FNS ++GL PN + Y +I G K+ +
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
G PDR TF++L R + +L D RR + +Y+ + A+C+ G+++
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 502 DGY--LMRGDLDKVTARF-SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
+ L + + ++ SY+ +I GF K+ R D A L EM+ G L R SY +L
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 559 HCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+ L EM + G K +N+ + G K D ++VF M+R ++
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALEL 676
N + ++ Y + +A+ F + + + LY+ +I LCK+ A+ L
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 677 CFEMLKVGLNPSIECYEVLV 696
EM K G++P++ Y ++
Sbjct: 572 IDEMTKEGISPNVVTYNSII 591
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 11/332 (3%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIA---NQIC 233
L+ Y +G + A+ + M+ GL + Y+ ++++ + F +A +++
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM--EFKQVAKFFDEMQ 331
Query: 234 MRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRF 291
G + + +C +G L EA +L + + + + + S+ L+ +C+ +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 292 ERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
+ A E++++ + N +Y I G + GR DEAL F + R G +V YN
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR-YLGIALDRVSYNT 449
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
L+ + R ++ ++L +M I ++VT NA+L + K G D ++F +
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
+ PN + Y LI G KEA + R G D +S L +ALC+ +
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
L+D + PN TY+ + A R+ ++
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 136/304 (44%), Gaps = 36/304 (11%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN-AFD 226
P R ++ L V + G + A +L M + ++ D F Y+ LL+++ + + AF+
Sbjct: 337 PDRITFNSLLAV-CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE 395
Query: 227 VIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC 286
++A R + ++ VI K GR +EA LN L G E+ +L G+
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA---LN-LFG--------EMRYL-GI-- 440
Query: 287 ESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
A++ VS Y + + GR +EAL+ R+ S G V
Sbjct: 441 -------ALDRVS-----------YNTLLSIYTKVGRSEEALDILREMA-SVGIKKDVVT 481
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN L+G ++ + +V ++ +M + PN++T + ++ + K G+ A+E+F
Sbjct: 482 YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFK 541
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
GL + + Y LI LC +G A ++ + G P+ T++++ +A R +D
Sbjct: 542 SAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Query: 467 EMWD 470
D
Sbjct: 602 RSAD 605
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 159/431 (36%), Gaps = 70/431 (16%)
Query: 420 LILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
+I TL G A R+ ++ GY FS L +A R +E + + E
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLL 539
PN TY+ + A + G M F + A+
Sbjct: 299 LRPNLVTYNAVIDACGKGG-------------------------MEFKQ------VAKFF 327
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIF--NSFIDGAMH 597
EM+ G + R ++ +L + NL + MT+ + D+F N+ +D
Sbjct: 328 DEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 598 ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL- 656
+ DLA E+ M IM N S V+ + ++ R +AL F ++R+ + ++
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
YN ++ K +++ AL++ EM VG+ + Y L+ +Y E + V+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE---VKKVFT 503
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSY 776
+ R L N+L + TLI G G L
Sbjct: 504 EMKRE--HVLPNLLTYS----------------------------TLIDGYSKGGL-YKE 532
Query: 777 SIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAH 835
+++ E + D+ Y+ L+ L + + A L D M + G+ PN TY +
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 836 GFSNHGRKDEA 846
F D +
Sbjct: 593 AFGRSATMDRS 603
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 122/297 (41%), Gaps = 16/297 (5%)
Query: 582 KPHCDIFNSFID----GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
+P+ +N+ ID G M + + F+ MQRNG+ + + ++ R
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQ---VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 638 DALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
A F+++ ++ + YN ++ +CK + D+A E+ +M + P++ Y ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHS--CVDLRREKEGE 754
R+ EA+NL G L N LL I +V S +D+ RE
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL---SIYTKVGRSEEALDILREMASV 473
Query: 755 FLDSSMLT--LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDK-A 811
+ ++T ++G + + + E+ + ++ TY+ L+ + + K A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
E+F GL + Y + +G A + EM K+G +P T N I
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 14/388 (3%)
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTN 243
AG D+A + M+ G+ + L++S AE + A + ++ +E
Sbjct: 116 AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH----FATALLLQSFEVEGCC 171
Query: 244 VIV---IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV-- 298
++V + L K R+E+A + + + LI LC + E+A+EL+
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 299 -SEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
S FG P Y I+G + L++A E F+ + P V Y +I +
Sbjct: 232 MSGFGCE-PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
++++ LL DM I P VT N ++ + K G + A E+ FG P+ + +
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
LI C G + +R+ + G FP+ T+S L NALC E ++ + +LL
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGFIKSNRGDI 534
+ +P Y+ + C+AG+V + ++ +++K + ++ +I+G R
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLL 562
A + +M G + + +L CLL
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 147/364 (40%), Gaps = 42/364 (11%)
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
S T ++ + LCK G + A + G + L FL+ E + A L+
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 299 --------------SEFGTSLPLE---------------------NAYGVWIRGLVQGGR 323
S T + L+ + + IRGL G+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI-PPNMVTM 382
++ALE G P V YN LI + N L E+ D+ + P++VT
Sbjct: 222 AEKALELL-GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
+++ +CK G + A L + + G+ P + + L+ G A +
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
G FPD TF++L + CR ++ + + L + R PN+ TYS ++ALC R+
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 503 GYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL- 558
+ G L D + F Y +I GF K+ + + A ++ EM++K + + ++ ++
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 559 -HCL 561
HC+
Sbjct: 461 GHCM 464
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 168/405 (41%), Gaps = 38/405 (9%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
Y + R L + G D A + F + S+G P L+ + +L LL+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMK-SDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
E + + +N++L KL V+ A++LF+ +F + + LI LC G
Sbjct: 164 SFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL-DFALERRFMPNSSTYS 488
++A +L SG G PD T++TL C+ ++++ ++ D P+ TY+
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
+S C+AG++ + + D+ + +G +N + +LV+ K E
Sbjct: 282 SMISGYCKAGKMREASSLLDDM-----------LRLGIYPTN---VTFNVLVDGYAKAGE 327
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREV 607
+ L + R + M++ G P F S IDG + +
Sbjct: 328 M------------LTAEEIRGK------MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTK-LYNRMIVGLCK 666
+E M G+ NA + +++ + R+ A + + ++ +YN +I G CK
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 667 SDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ K + A + EM K P + +L+ C R +EAV++
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 138/329 (41%), Gaps = 16/329 (4%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
+FD F+SC + + + L+ G GK + AL LLG M G + D Y+ L+
Sbjct: 193 LFDEHLRFQSC---NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 215 SLAENNCYNAF-----DVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGS 269
++N N DV + +C ++ + +I CK G++ EA + L+ ++
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS---MISGYCKAGKMREASSLLDDMLRL 306
Query: 270 GKELHRSELSFLIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDE 326
G + L+ ++ A E+ + FG P + I G + G++ +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC-FPDVVTFTSLIDGYCRVGQVSQ 365
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
+ ++ ++ G P Y+ILI L ENRL ELL + I P N V+
Sbjct: 366 GFRLW-EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
FCK G V+ A + + P+ + + LI+ C G EA + G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFA 475
PD+ T S+L + L + E + L A
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHLNQIA 513
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 140/340 (41%), Gaps = 74/340 (21%)
Query: 602 DLAREVFELMQRNGIMTN-------------------ASSQIL--------------VMK 628
DLA ++FE M+ +G+ N A++ +L ++
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLN 179
Query: 629 SYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
+ + R+ DA++ F++ +R Q TK +N +I GLC KA+ ALEL M G P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 688 SIECYEVLVQKLCSLKRYYEA--------------------VNLVNVYEKAG--RRLTSF 725
I Y L+Q C +A ++++ Y KAG R +S
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 726 LGNVLLFHSMISPEVYHSCVDLRREKEGEFL----------------DSSMLTLIIGAFS 769
L ++L + ++ VD K GE L D T +I +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVD-GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 770 GCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRW 828
+VS + EE+ A+ + +TY++L+ L + + + KA EL ++ + + P +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 829 TYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
Y + GF G+ +EA V EM KK P + T ++
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 14/388 (3%)
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTN 243
AG D+A + M+ G+ + L++S AE + A + ++ +E
Sbjct: 116 AGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLH----FATALLLQSFEVEGCC 171
Query: 244 VIV---IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV-- 298
++V + L K R+E+A + + + LI LC + E+A+EL+
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 299 -SEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
S FG P Y I+G + L++A E F+ + P V Y +I +
Sbjct: 232 MSGFGCE-PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
++++ LL DM I P VT N ++ + K G + A E+ FG P+ + +
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTF 350
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
LI C G + +R+ + G FP+ T+S L NALC E ++ + +LL
Sbjct: 351 TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLAS 410
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGFIKSNRGDI 534
+ +P Y+ + C+AG+V + ++ +++K + ++ +I+G R
Sbjct: 411 KDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFE 470
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLL 562
A + +M G + + +L CLL
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 147/364 (40%), Gaps = 42/364 (11%)
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
S T ++ + LCK G + A + G + L FL+ E + A L+
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 299 --------------SEFGTSLPLE---------------------NAYGVWIRGLVQGGR 323
S T + L+ + + IRGL G+
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI-PPNMVTM 382
++ALE G P V YN LI + N L E+ D+ + P++VT
Sbjct: 222 AEKALELL-GVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
+++ +CK G + A L + + G+ P + + L+ G A +
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
G FPD TF++L + CR ++ + + L + R PN+ TYS ++ALC R+
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK 400
Query: 503 GYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL- 558
+ G L D + F Y +I GF K+ + + A ++ EM++K + + ++ ++
Sbjct: 401 ARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILII 460
Query: 559 -HCL 561
HC+
Sbjct: 461 GHCM 464
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 168/405 (41%), Gaps = 38/405 (9%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
Y + R L + G D A + F + S+G P L+ + +L LL+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMK-SDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
E + + +N++L KL V+ A++LF+ +F + + LI LC G
Sbjct: 164 SFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL-DFALERRFMPNSSTYS 488
++A +L SG G PD T++TL C+ ++++ ++ D P+ TY+
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
+S C+AG++ + + D+ + +G +N + +LV+ K E
Sbjct: 282 SMISGYCKAGKMREASSLLDDM-----------LRLGIYPTN---VTFNVLVDGYAKAGE 327
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREV 607
+ L + R + M++ G P F S IDG + +
Sbjct: 328 M------------LTAEEIRGK------MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRL 369
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTK-LYNRMIVGLCK 666
+E M G+ NA + +++ + R+ A + + ++ +YN +I G CK
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429
Query: 667 SDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ K + A + EM K P + +L+ C R +EAV++
Sbjct: 430 AGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 138/329 (41%), Gaps = 16/329 (4%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
+FD F+SC + + + L+ G GK + AL LLG M G + D Y+ L+
Sbjct: 193 LFDEHLRFQSC---NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 215 SLAENNCYNAF-----DVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGS 269
++N N DV + +C ++ + +I CK G++ EA + L+ ++
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS---MISGYCKAGKMREASSLLDDMLRL 306
Query: 270 GKELHRSELSFLIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDE 326
G + L+ ++ A E+ + FG P + I G + G++ +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC-FPDVVTFTSLIDGYCRVGQVSQ 365
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
+ ++ ++ G P Y+ILI L ENRL ELL + I P N V+
Sbjct: 366 GFRLW-EEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
FCK G V+ A + + P+ + + LI+ C G EA + G
Sbjct: 425 DGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFA 475
PD+ T S+L + L + E + L A
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHLNQIA 513
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 140/340 (41%), Gaps = 74/340 (21%)
Query: 602 DLAREVFELMQRNGIMTN-------------------ASSQIL--------------VMK 628
DLA ++FE M+ +G+ N A++ +L ++
Sbjct: 120 DLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLN 179
Query: 629 SYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
+ + R+ DA++ F++ +R Q TK +N +I GLC KA+ ALEL M G P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 688 SIECYEVLVQKLCSLKRYYEA--------------------VNLVNVYEKAG--RRLTSF 725
I Y L+Q C +A ++++ Y KAG R +S
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 726 LGNVLLFHSMISPEVYHSCVDLRREKEGEFL----------------DSSMLTLIIGAFS 769
L ++L + ++ VD K GE L D T +I +
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVD-GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 770 GCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRW 828
+VS + EE+ A+ + +TY++L+ L + + + KA EL ++ + + P +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 829 TYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
Y + GF G+ +EA V EM KK P + T ++
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTIL 458
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 160/385 (41%), Gaps = 41/385 (10%)
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
LL+ENR DV + +M I PN+ T N V+ CK G ++ A ++ +G SPN
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPN 257
Query: 414 YMAYKYLILTLCWDGCPKEAYR---VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
++Y LI C G + Y+ VL+ P+ TF+ L + ++ +
Sbjct: 258 VVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMK 317
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFI 527
+ L++ PN +Y+ ++ LC G++ + MR + + +Y +I GF
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI 587
K++ A + +K +G P TR +N+L
Sbjct: 378 KNDMLKEALDMFGSVKGQGAV------------------PTTRMYNML------------ 407
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR 647
ID K D + E M+R GI+ + + ++ R+ I A + F+ +
Sbjct: 408 ----IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 648 HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYE 707
+ + ++ ++ G C+ ++ A L EM K+GL P Y ++++ C
Sbjct: 464 SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 708 AVNLVNVYEKAGR-RLTSFLGNVLL 731
A N+ EK R R+ NVLL
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLL 548
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/529 (19%), Positives = 209/529 (39%), Gaps = 65/529 (12%)
Query: 119 CLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRAR--YH-- 174
CL+++ W + + + L+ A+ + FL F H+ +H
Sbjct: 84 CLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 175 -------------DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC 221
D LV+ YA + ++ R + G L L+ +L + N
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 222 YNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF 280
+ + ++ R + ++ T +VI LCK G++
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKM------------------------ 239
Query: 281 LIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRG---LVQGGRLDEALEFFRQKRDS 337
N+ +E + +G S P +Y I G L G++ +A ++ ++
Sbjct: 240 --------NKARDVMEDMKVYGCS-PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+ P +NILI +++ L ++ +M + + PN+++ N+++ C G +
Sbjct: 291 D-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A+ + + G+ PN + Y LI C + KEA + S G G P R ++ L +
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLID 409
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR- 516
A C+ KID+ + L + +P+ TY+ ++ LCR G +E + D++T++
Sbjct: 410 AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL---FDQLTSKG 466
Query: 517 ----FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR--TR 570
++ ++ G+ + AA LL EM + G + + +Y V+ N + T
Sbjct: 467 LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 571 FFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+E + + +N + G K + A + M G++ N
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 167/398 (41%), Gaps = 44/398 (11%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG---RLLRENRLKDVYEL 366
+ V I L + G++++A + + G P V YN LI +L ++ +
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMK-VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 367 LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCW 426
L +M E + PN+ T N ++ F K + ++++F + PN ++Y LI LC
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
G EA + G P+ T++ L N C+ + E D+ + +P +
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 487 YSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMK 543
Y+ + A C+ G+++DG+ ++ ++++ V +Y +I G ++ + A +L ++
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDL 603
KG P F+ ++G +
Sbjct: 464 SKGL-----------------------------------PDLVTFHILMEGYCRKGESRK 488
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDA--LRFFNDIRHQVVVSTKLYNRMI 661
A + + M + G+ + +VMK Y + + A +R + ++ ++ YN ++
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
G + K + A L EML+ GL P+ YE++ +++
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 186/446 (41%), Gaps = 45/446 (10%)
Query: 433 AYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVS 492
+ + S GY + L AL +E + ++ + + R+ PN T++ ++
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 493 ALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIK-SNRGDI--AARLLVEMKEKG 546
ALC+ G++ + D+ SY +I G+ K G + A +L EM E
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 547 YELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAR 605
+++ ++ DN EM+ KP+ +NS I+G + K A
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGL 664
+ + M G+ N + ++ + ++ + +AL F ++ Q V +T++YN +I
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
CK K D L EM + G+ P + Y L+ LC A L + G
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG----- 466
Query: 725 FLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEEL 784
L +++ FH ++ E Y C ++GE ++ML L+E+
Sbjct: 467 -LPDLVTFHILM--EGY--C------RKGESRKAAML-------------------LKEM 496
Query: 785 IAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRM-CQRGLEPNRWTYGLMAHGFSNHGR 842
TYN++M+ ++ A + +M +R L N +Y ++ G+S G+
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 843 KDEAKRWVHEMLKKGFNPPENTRNVI 868
++A ++EML+KG P T ++
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT-- 303
+I LC G++ EA + + +V +G + + + LI C+++ + A+++ FG+
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM---FGSVK 393
Query: 304 ---SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
++P Y + I + G++D+ +++ + EG VP YN LI L R +
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFA-LKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+ +L + + P++VT + ++ +C+ G A L S+ GL P ++ Y +
Sbjct: 453 EAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRR------TFSTLANALCRECKIDEMWDLLDF 474
+ C +G K A ++ T +RR +++ L ++ K+++ LL+
Sbjct: 512 MKGYCKEGNLKAA-----TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNE 566
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVED 502
LE+ +PN TY + G V D
Sbjct: 567 MLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 34/287 (11%)
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRM 660
+L E F+ G +A S +M + + R +D + + IR ++ + +N +
Sbjct: 170 ELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVV 229
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL---KRYYEAVNLVN--VY 715
I LCK+ K + A ++ +M G +P++ Y L+ C L + Y+A ++ V
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
Query: 716 EKAGRRLTSF-------------LGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT 762
LT+F G++ +F M+ +V + + S +
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI-------------SYNS 336
Query: 763 LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDK-ACELFDRMCQR 821
LI G +G ++S +I +++++ ++ TYN L+ +DM K A ++F + +
Sbjct: 337 LINGLCNGG-KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 822 GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G P Y ++ + G+ D+ EM ++G P T N +
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 4/248 (1%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQI 232
+++L+ G GK A+ + +M G+ + Y+ L+N +N+ A D+ +
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+ ++I CK G++++ A + G + LI LC + E
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 293 RAVELVSEFGT-SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
A +L + + LP + + + G + G +A ++ G P + YNI++
Sbjct: 454 AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE-MSKMGLKPRHLTYNIVM 512
Query: 352 GRLLRENRLKDVYELLMDM-NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+E LK + M E + N+ + N +L + + G ++ A L N + GL
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 411 SPNYMAYK 418
PN + Y+
Sbjct: 573 VPNRITYE 580
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 170/400 (42%), Gaps = 12/400 (3%)
Query: 103 VLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDF 162
VL R+ G L +FF W+ +Q + H+ + + + R L++D +
Sbjct: 106 VLNRFRNAG-----LLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM 160
Query: 163 RSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN-NC 221
R + + ++ YA A K D A++ M L + ++ LL++L ++ N
Sbjct: 161 RKKKMLNVETFC-IVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNV 219
Query: 222 YNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL 281
A +V N + R T I+++ K+ L +A ++ +G S +
Sbjct: 220 RKAQEVFEN-MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIM 278
Query: 282 IGVLCESNRFERAVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
+ +LC++ R + A+ +V S+ P Y V + RL+EA++ F + S G
Sbjct: 279 VDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERS-G 337
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
+N LIG + NR+K+VY +L +M + PN + N +L + G D A
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
++F + P+ Y +I C + A +V + G FP TFS L N L
Sbjct: 398 DVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
C E + LL+ +E P+ T+ R L + R
Sbjct: 457 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 159/347 (45%), Gaps = 8/347 (2%)
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
Y+++I + + K +++L+ M + + N+ T V+ + + VD A+ FN
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
++ L PN +A+ L+ LC ++A V + + PD +T+S L +E +
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLP 254
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMI 523
+ ++ ++ P+ TYS V LC+AGRV++ + +D + F Y+ ++
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLV 314
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-K 582
+ NR + A +EM+ G + + + ++ + + + L EM + G
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P+ N + + + D A +VF M + +A + +V+K + + + A +
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 643 FNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ +R + V S ++ +I GLC+ A L EM+++G+ PS
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPS 480
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 5/275 (1%)
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL 656
A K D A F +M++ + N + ++ + +S+ + A F ++R + +K
Sbjct: 180 RAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKT 239
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
Y+ ++ G K A E+ EM+ G +P I Y ++V LC R EA+ +V +
Sbjct: 240 YSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMD 299
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVD--LRREKEGEFLDSSMLTLIIGAFSGCLRV 774
+ + T+F+ +VL+ H+ + VD L E+ G D ++ +IGAF R+
Sbjct: 300 PSICKPTTFIYSVLV-HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRM 358
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLM 833
+ L+E+ +K + + N+++R L + D+A ++F +M + EP+ TY ++
Sbjct: 359 KNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMV 417
Query: 834 AHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
F + A + M KKG P +T +V+
Sbjct: 418 IKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 4/239 (1%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
A+ + L + + +A E F RD F P Y+IL+ +E L E+ +
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDR--FTPDSKTYSILLEGWGKEPNLPKAREVFRE 262
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M + P++VT + ++ CK G VD AL + S P Y L+ T +
Sbjct: 263 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENR 322
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
+EA +G D F++L A C+ ++ ++ +L + PNS + +
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 490 FVSALCRAGRVEDGYLMRGDLDKVTA--RFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+ L G ++ + + + KV +Y +I F + + A ++ M++KG
Sbjct: 383 ILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 229/554 (41%), Gaps = 70/554 (12%)
Query: 326 EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAV 385
EAL+F + R S +P N I +L+ N + L + P+ + N+V
Sbjct: 4 EALQFLSRLRKSSN-LPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 386 LCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV---LRSSSG 442
+ F CKLG V A ++ +S +FG P+ ++Y LI C +G + A V LR+S G
Sbjct: 63 VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
PD +F++L N + +DE++ + L + PN TYS ++ C++G ++
Sbjct: 123 FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 503 GY-----LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
+ R L F+ +I G+ K+ ++A L EM+ L +Y
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTC--LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY--- 236
Query: 558 LHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+ IDG + A E++ M + +
Sbjct: 237 -------------------------------TALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALEL 676
N+ ++ +F+ +A++F + +Q + + Y +I GLC + K A E+
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
+M K L P + + ++ R AVN+ Y K R F +V+ +MI
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM---YHKLIER--GFEPDVVALSTMI 380
Query: 737 -----SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPV 791
+ +++ + V EK + M T++I A C + E+E L +K
Sbjct: 381 DGIAKNGQLHEAIVYFCIEKANDV----MYTVLIDAL--CKEGDFI--EVERLFSKISEA 432
Query: 792 ----DIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
D + Y + L ++ A +L RM Q GL + Y + +G ++ G EA
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 847 KRWVHEMLKKGFNP 860
++ EML G +P
Sbjct: 493 RQVFDEMLNSGISP 506
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 126/606 (20%), Positives = 227/606 (37%), Gaps = 126/606 (20%)
Query: 266 LVGSGKELHRSELSFLIGVLCESNRFERAVELV---SEFGTSLPLENAYGVWIRGLVQGG 322
LV G HRS + ++ +C+ + + A ++V FG P +Y I G + G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCE-PDVISYNSLIDGHCRNG 105
Query: 323 RLDEALEFFRQKRDSEGFV--PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMV 380
+ A R S GF+ P V +N L + L +V+ + M + C PN+V
Sbjct: 106 DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVV 164
Query: 381 TMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS 440
T + + FCK G + +AL+ F+S + LSPN + + LI C G + A + +
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
+ T++ L + C++ ++ ++ +E R PNS Y+ +
Sbjct: 225 RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII--------- 275
Query: 501 EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
DG+ RGD D A + L +M +G L ++Y +
Sbjct: 276 -DGFFQRGDSDN----------------------AMKFLAKMLNQGMRLDITAYGVI--- 309
Query: 561 LLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
I G K A E+ E M+++ ++ +
Sbjct: 310 -------------------------------ISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 621 SSQILVMKSYFRSRRISDALRFFNDIRHQ------VVVSTKLYNRMIVGLCKSDKADIAL 674
+M +YF+S R+ A+ ++ + + V +ST MI G+ K+ + A+
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST-----MIDGIAKNGQLHEAI 393
Query: 675 E-LCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFH 733
C E + Y VL+ LC + E L + +AG F
Sbjct: 394 VYFCIE------KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF-------- 439
Query: 734 SMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDI 793
M + + C K+G +D+ L ++ + +D+
Sbjct: 440 -MYTSWIAGLC------KQGNLVDAFKLK-------------------TRMVQEGLLLDL 473
Query: 794 YTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHE 852
Y L+ L M +A ++FD M G+ P+ + L+ + G A + +
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Query: 853 MLKKGF 858
M ++G
Sbjct: 534 MQRRGL 539
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 135/341 (39%), Gaps = 45/341 (13%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQICMR 235
L+ GY AG ++A+ L MR + L+ Y L++ + A ++ + + R
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
Query: 236 GYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAV 295
+ + +I ++G + A L ++ G L + +I LC + + + A
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 296 ELVSEFGTS--LP-------LENAY----------------------------GVWIRGL 318
E+V + S +P + NAY I G+
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ G+L EA+ +F ++ ++ V Y +LI L +E +V L ++E + P+
Sbjct: 384 AKNGQLHEAIVYFCIEKAND------VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
+ + CK G + A +L Q GL + +AY LI L G EA +V
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD 497
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
+G PD F L A +E + DLL ++RR
Sbjct: 498 EMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL-LDMQRR 537
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 130/344 (37%), Gaps = 41/344 (11%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
I G + G L+ A+ +++ R + V Y LI ++ ++ E+ M E
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNV-VTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ PN + ++ F + G D A++ G+ + AY +I LC +G KEA
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP------------ 482
++ + PD F+T+ NA + ++ ++ +ER F P
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383
Query: 483 ------------------NSSTYSRFVSALCRAG---RVEDGYLMRGDLDKVTARFSYAK 521
N Y+ + ALC+ G VE + + V +F Y
Sbjct: 384 AKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTS 443
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH---MDNPRTRFFNLLEMM 578
I G K A +L M ++G L +Y +++ L M R F EM+
Sbjct: 444 WIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD---EML 500
Query: 579 THG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNAS 621
G P +F+ I A ++ MQR G++T S
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/566 (22%), Positives = 226/566 (39%), Gaps = 32/566 (5%)
Query: 172 RYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIAN 230
R + T++ Y+ GK + A+ L RM+ G Y+++L+ + + + +
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 231 QICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
++ +G + T V+ ++G L EA+ L G E + L+ V ++
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 290 RFERAVELVSEF-GTSLPLEN-AYGVWIRGLVQGGRLDEA---LEFFRQKRDSEGFVPCK 344
+ A+ ++ E S P ++ Y + V+ G EA +E +K G +P
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK----GVMPNA 386
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
+ Y +I + + + +L M E PN T NAVL K + +++
Sbjct: 387 ITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCD 446
Query: 405 RSQFGLSPNYMAYKYLILTLCWD-GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR-- 461
G SPN + + L LC + G K RV R G+ PDR TF+TL +A R
Sbjct: 447 MKSNGCSPNRATWNTM-LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 462 -ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARF 517
E +M+ + A F +TY+ ++AL R G G + D+
Sbjct: 506 SEVDASKMYGEMTRA---GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKE----KGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
SY+ M+ + K R+ +KE + L R+ C + R F
Sbjct: 563 SYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA--FT 620
Query: 574 LLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
L + HG KP IFNS + N D A + E ++ +G+ + + +M Y R
Sbjct: 621 LFK--KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 633 SRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
A + + Q+ YN +I G C+ A+ + EM + G+ P I
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 738
Query: 692 YEVLVQKLCSLKRYYEAVNLVNVYEK 717
Y V ++ + E +++ K
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAK 764
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 121/589 (20%), Positives = 230/589 (39%), Gaps = 25/589 (4%)
Query: 288 SNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
+ ++E+A++L + E G S P Y V + + GR + + S+G +
Sbjct: 223 TGKYEKAIDLFERMKEMGPS-PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
+ ++ RE L++ E ++ P VT NA+L F K G+ AL +
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ + + Y L+ G KEA V+ + G P+ T++T+ +A + K
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAK 521
DE L E +PN+ TY+ +S L + R + M D+ R ++
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 522 MIMGFIKSNRG--DIAARLLVEMKEKGYELKRSSYRHVL----HCLLHMDNPRTRFFNLL 575
M+ + N+G R+ EMK G+E R ++ ++ C +D ++ +
Sbjct: 462 MLA--LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD--ASKMYG-- 515
Query: 576 EMMTHGKPHC-DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
EM G C +N+ ++ V M+ G +S L+++ Y +
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 635 RISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKV-GLNPSIECYE 693
R N I+ + + + R ++ +A E F + K G P + +
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 635
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR-EKE 752
++ Y +A ++ + G N L+ + E + + L+ EK
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 753 GEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKAC 812
D +I F + +++ L E+ + I+TYN + T M
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 813 E-LFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
E + + M + PN T+ ++ G+ G+ EA +V ++ K F+P
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFDP 802
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 129/611 (21%), Positives = 237/611 (38%), Gaps = 31/611 (5%)
Query: 272 ELHRSELSFLIGVLCESNRFERAVEL-----VSEFGTSLPLEN-AYGVWIRGLVQGGRLD 325
EL R++L L+ L +S +ERAV L +S +L L++ +++R L + +
Sbjct: 133 ELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYS 192
Query: 326 EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAV 385
A + + E + + Y ++ R + + +L M E P +VT N +
Sbjct: 193 VAAKLLDKIPLQEYLLDVRA-YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVI 251
Query: 386 LCFFCKLGMV-DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
L F K+G L + + GL + ++ +G +EA G
Sbjct: 252 LDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCG 311
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
Y P T++ L + E +L E +S TY+ V+A RAG ++
Sbjct: 312 YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA- 370
Query: 505 LMRGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
G ++ +T + +Y +I + K+ + D A +L MKE G +Y VL
Sbjct: 371 --AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428
Query: 559 HCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
L L +M ++G P+ +N+ + + VF M+ G
Sbjct: 429 SLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFE 488
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
+ + ++ +Y R DA + + ++ R YN ++ L + +
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV 548
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLK-RYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM 735
+M G P+ Y +++Q C K Y + + K G+ S++ LL +
Sbjct: 549 ISDMKSKGFKPTETSYSLMLQ--CYAKGGNYLGIERIENRIKEGQIFPSWM---LLRTLL 603
Query: 736 ISPEVYHSCVDLRR-----EKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFP 790
++ + R +K G D + ++ F+ + LE +
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 791 VDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRW 849
D+ TYN LM + KA E+ + + L+P+ +Y + GF G EA R
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 850 VHEMLKKGFNP 860
+ EM ++G P
Sbjct: 724 LSEMTERGIRP 734
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 144/368 (39%), Gaps = 33/368 (8%)
Query: 136 RTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLG 195
R T+ + + + V R+ +SC F +TL+ Y G A + G
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 196 RMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGR 255
M G + Y+ LLN+LA + + + + + + +G++ T+ ++ +G
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG- 574
Query: 256 LEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWI 315
G+ + R E G + S R + L++ F
Sbjct: 575 ------------GNYLGIERIENRIKEGQIFPSWMLLRTL-LLANFK------------C 609
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
R L R A F++ G+ P V +N ++ R N +L + E +
Sbjct: 610 RALAGSER---AFTLFKK----HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
P++VT N+++ + + G A E+ + + L P+ ++Y +I C G +EA R
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
+L + G P T++T + E+ D+++ + PN T+ V C
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYC 782
Query: 496 RAGRVEDG 503
RAG+ +
Sbjct: 783 RAGKYSEA 790
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 172/379 (45%), Gaps = 7/379 (1%)
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
+ D + L +M ++ P++V VL K+ D+ + L++ G+S + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
LI C A +L G+ P T +L N C+ + E L+D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIA 535
F+PN Y+ ++ LC+ + + + ++K R +Y +I G S R A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDG 594
ARLL +M ++ + + ++ + N EM+ P+ +NS I+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 595 -AMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVS 653
+H D A+ +F+LM G + + ++ + +S+R+ D ++ F ++ +Q +V
Sbjct: 299 FCIHGCLGD-AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 654 TKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
YN +I G C++ K ++A ++ M+ G++P I Y +L+ LC+ + +A+ +V
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 713 NVYEKAGRRLTSFLGNVLL 731
+K+ + N+++
Sbjct: 418 EDLQKSEMDVDIITYNIII 436
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 150/369 (40%), Gaps = 44/369 (11%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
GF P V L+ + NR ++ L+ M+ PN+V N V+ CK ++ A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
LE+F + G+ + + Y LI L G +A R+LR P+ F+ L +
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM------RGDLDK 512
+E + E +L + R +PN TY+ ++ C G + D M +G
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
V +Y +I GF KS R + +L EM +G +Y
Sbjct: 324 VV---TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY------------------ 362
Query: 573 NLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
N+ I G A K ++A++VF M G+ + + +++
Sbjct: 363 ----------------NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 633 SRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
+ +I AL D+ + ++ V YN +I GLC++DK A L + + G+ P
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 692 YEVLVQKLC 700
Y ++ LC
Sbjct: 467 YITMISGLC 475
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 163/424 (38%), Gaps = 80/424 (18%)
Query: 278 LSFLIGVLCESNRFERAVELVSE---FGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQK 334
L L+ C+ NRF+ AV LV FG +P Y I GL + L+ ALE F
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGFGF-VPNVVIYNTVINGLCKNRDLNNALEVF-YC 209
Query: 335 RDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
+ +G V YN LI L R D LL DM + I PN++ A++ F K G
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
+ A L+ + + PN Y LI C GC +A + G FPD T++T
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK-- 512
L ++ C++ RVEDG + ++
Sbjct: 330 L-----------------------------------ITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 513 -VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
V F+Y +I G+ ++ + ++A ++ M + G +Y +L CL + + +
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN-NGKIEKA 413
Query: 572 FNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
++E + + DI +N I G +K A +F + R G+ +A +
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA------- 466
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSI 689
Y MI GLC+ A +LC M + G PS
Sbjct: 467 ---------------------------YITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 690 ECYE 693
Y+
Sbjct: 500 RIYD 503
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 147/350 (42%), Gaps = 28/350 (8%)
Query: 204 LDGFG-------YHILLNSLAEN-NCYNAFDVIANQICM--RGYESH-MTNVIVIKHLCK 252
+DGFG Y+ ++N L +N + NA +V CM +G + +T +I L
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF---YCMEKKGIRADAVTYNTLISGLSN 231
Query: 253 QGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF--GTSLPLENA 310
GR +A L +V + + + LI + A L E + +P
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 311 YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM 370
Y I G G L +A F S+G P V YN LI + R++D +L +M
Sbjct: 292 YNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 371 NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCP 430
+ + T N ++ +C+ G ++VA ++FN G+SP+ + Y L+ LC +G
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 431 KEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRF 490
++A ++ + D T++ + LCR K+ E W L + P++ Y
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470
Query: 491 VSALCRAG-----------RVEDGYLMRGDLDKVTARFSYAKMIMGFIKS 529
+S LCR G EDG++ + T R Y + IK+
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKA 520
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 16/360 (4%)
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM 578
+ +++ K N+ DI L +M+ G S+ ++HC L +MM
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 579 THG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
G +P S ++G N+ A + + M G + N V+ ++R ++
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 638 DALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
+AL F + + + + + YN +I GL S + A L +M+K ++P++ + L+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCV-------DLRR 749
EA NL Y++ RR S + NV ++S+I+ H C+ DL
Sbjct: 262 DTFVKEGNLLEARNL---YKEMIRR--SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 750 EKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DM 808
K G F D +I F RV ++ E+ + D +TYN L+ +
Sbjct: 317 SK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ A ++F+RM G+ P+ TY ++ N+G+ ++A V ++ K + T N+I
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 135 TRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLL 194
T + + F I C +FD + + C FP Y +TL+ G+ + + + + L
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVS-KGC-FPDVVTY-NTLITGFCKSKRVEDGMKLF 347
Query: 195 GRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQ 253
M +QGL D F Y+ L++ + N + N++ G + T I++ LC
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Query: 254 GRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAY 311
G++E+A + L S ++ + +I LC +++ + A L P AY
Sbjct: 408 GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 467
Query: 312 GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
I GL + G EA + R+ ++ +GF+P + Y+
Sbjct: 468 ITMISGLCRKGLQREADKLCRRMKE-DGFMPSERIYD 503
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 4/291 (1%)
Query: 212 LLNSLAENNCYNAFDVIANQICMRGYESHMTN-VIVIKHLCKQGRLEEAEAHLNGLVGSG 270
LL ++A+ N Y A + + M G + + +I C+ RL A + L ++ G
Sbjct: 85 LLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLG 144
Query: 271 KELHRSELSFLIGVLCESNRFERAVELVSEF-GTSL-PLENAYGVWIRGLVQGGRLDEAL 328
E L+ C NRF A+ LV + G P Y I L + G+++ AL
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
+ + + G P V YN LI RL +L DM I P+++T +A++
Sbjct: 205 DVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
+ K G + A + +N Q ++PN + Y LI LC G EA +VL G+FP+
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPN 323
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
T++TL N C+ ++D+ +L ++ TY+ C+AG+
Sbjct: 324 AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 179/450 (39%), Gaps = 47/450 (10%)
Query: 277 ELSFLIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQ 333
+ S L+ + + N++E + L + G S L ++ I + RL AL
Sbjct: 81 DFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY-SFTTLIDCFCRCARLSLALSCL-G 138
Query: 334 KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG 393
K GF P V + L+ NR + L+ + PN+V N ++ C+ G
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFS 453
V+ AL++ + G+ P+ + Y LI L G + R+L G PD TFS
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV 513
L + +E ++ E + ++R PN TY+ ++ LC G +++ + L V
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL--V 316
Query: 514 TARF-----SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
+ F +Y +I G+ K+ R D ++L M G + +Y
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY-------------- 362
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
N+ G A K A +V M G+ + + +++
Sbjct: 363 --------------------NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 629 SYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
+I AL D+ + + VV YN +I GLCK+DK + A L + G++P
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEK 717
+ Y ++ L + + EA L +K
Sbjct: 463 DVITYITMMIGLRRKRLWREAHELYRKMQK 492
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 158/379 (41%), Gaps = 33/379 (8%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
+ ++AL F +S P V ++ L+ + + N+ + V L + I ++ +
Sbjct: 59 KFNDALTLFCDMAESHPL-PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSF 117
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
++ FC+ + +AL + G P+ + + L+ C EA ++ G
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
GY P+ ++T+ ++LC + +++ D+L + P+ TY+ ++ L +G
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW-- 235
Query: 503 GYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
V+AR M MG I + +A + V KE + Y ++
Sbjct: 236 ---------GVSARILSDMMRMG-ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ--- 282
Query: 563 HMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
R N P+ +NS I+G D A++V ++ G NA +
Sbjct: 283 -------RSVN---------PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 623 QILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEML 681
++ Y +++R+ D ++ + R V T YN + G C++ K A ++ M+
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 682 KVGLNPSIECYEVLVQKLC 700
G++P + + +L+ LC
Sbjct: 387 SCGVHPDMYTFNILLDGLC 405
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 143/356 (40%), Gaps = 6/356 (1%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
V R H TL+ + + +AL LG+M G + + L+N
Sbjct: 98 VISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVN 157
Query: 215 SLAENNCYNAFDVIANQICMRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
N + + +QI GYE ++ +I LC++G++ A L + G
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
Query: 274 HRSELSFLIGVLCESNRFERAVELVSE---FGTSLPLENAYGVWIRGLVQGGRLDEALEF 330
+ LI L S + + ++S+ G S P + I + G+L EA +
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGIS-PDVITFSALIDVYGKEGQLLEAKKQ 276
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
+ + P V YN LI L L + ++L + PN VT N ++ +C
Sbjct: 277 YNE-MIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYC 335
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
K VD +++ S+ G+ + Y L C G A +VL G PD
Sbjct: 336 KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMY 395
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
TF+ L + LC KI + L+ + + + TY+ + LC+A +VED + +
Sbjct: 396 TFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 155/379 (40%), Gaps = 13/379 (3%)
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAKMIMGFIKSNRGDIAARLLVEM 542
+++ + CR R+ G + K+ + ++ ++ GF NR A L+ ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 543 KEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKP 601
GYE Y ++ L T L M G +P +NS I H+
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRM 660
++ + M R GI + + ++ Y + ++ +A + +N+ I+ V + YN +
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
I GLC D A ++ ++ G P+ Y L+ C KR + + ++ V + G
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 721 RLTSFLGNVLLFHSMISPEVYHSCVDL--RREKEGEFLDSSMLTLIIGAFSGCLRVSYSI 778
+F N L+ + + + R G D +++ ++ ++
Sbjct: 356 DGDTFTYNT-LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 779 QELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGF 837
LE+L V I TYN++++ L D ++ A LF + +G+ P+ TY M G
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Query: 838 SNHGRKDEAKRWVHEMLKK 856
R+ R HE+ +K
Sbjct: 475 ----RRKRLWREAHELYRK 489
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 8/217 (3%)
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
+ +I C+ + +AL +M+K+G PSI + LV C + R+YEA++LV+
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT---LIIGAF-SGCL 772
G + N ++ S+ ++ +D+ + + + ++T LI F SG
Sbjct: 177 GLGYEPNVVIYNTII-DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 773 RVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYG 831
VS I L +++ D+ T++ L+ + +A + ++ M QR + PN TY
Sbjct: 236 GVSARI--LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYN 293
Query: 832 LMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ +G HG DEAK+ ++ ++ KGF P T N +
Sbjct: 294 SLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 144/344 (41%), Gaps = 48/344 (13%)
Query: 551 RSSYRHVLHCLLH---MDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREV 607
RS YR L LH ++ T F ++ E +H P F+ + NK + +
Sbjct: 44 RSDYRERLRSGLHSIKFNDALTLFCDMAE--SHPLPSIVDFSRLLIAIAKLNKYEAVISL 101
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCK 666
F ++ GI + S ++ + R R+S AL + + S + ++ G C
Sbjct: 102 FRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCH 161
Query: 667 SDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFL 726
++ A+ L +++ +G P++ Y ++ LC + A++++ +K G R
Sbjct: 162 VNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVT 221
Query: 727 GNVL---LFHSM----------------ISPEV--YHSCVDLRREKEGEFLDSSMLTLII 765
N L LFHS ISP+V + + +D+ KEG+ L++
Sbjct: 222 YNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY-GKEGQLLEAK------ 274
Query: 766 GAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLE 824
++ E+I + +I TYN L+ L H + D+A ++ + + +G
Sbjct: 275 -------------KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 825 PNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
PN TY + +G+ R D+ + + M + G + T N +
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 6/182 (3%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFD 226
FP+ Y +TL+ GY A + D + +L M G+D D F Y+ L + ++A +
Sbjct: 321 FPNAVTY-NTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 227 VIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ ++ G M T I++ LC G++ +A L L S + + +I L
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL 439
Query: 286 CESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVP 342
C++++ E A L G S P Y + GL + EA E +R+ + +G +P
Sbjct: 440 CKADKVEDAWYLFCSLALKGVS-PDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Query: 343 CK 344
K
Sbjct: 499 IK 500
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 168/400 (42%), Gaps = 13/400 (3%)
Query: 103 VLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDF 162
VL+ L + G + L F WA Q F HT + + A+ L + L++ + D
Sbjct: 100 VLKKLSNAG-----VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM 154
Query: 163 RSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCY 222
++ + + + YA A K A+ +M G ++ ++ +L++L+++
Sbjct: 155 KAKKLLSKETFA-LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNV 213
Query: 223 NAFDVIANQICMRGYESHMTN-VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL 281
+ +++ + +E + + I+++ ++ L + + G E +
Sbjct: 214 GDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGII 273
Query: 282 IGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
I C++ ++E A+ +E P + + I GL +L++ALEFF + + S G
Sbjct: 274 INAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSS-G 332
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
F YN L+G R++D Y+ + +M + PN T + +L ++ A
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
E++ + S P Y+ ++ C A ++ G G P FS+L AL
Sbjct: 393 EVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
C E K+DE + + L+ P +SR L GR
Sbjct: 450 CHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGR 489
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 166/403 (41%), Gaps = 11/403 (2%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
++ L G L AL F+ + +GF YN LI L + + K ++ L+ DM
Sbjct: 101 LKKLSNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK 158
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ T + + + V A+ F+ +FG + ++ TL +A
Sbjct: 159 LLSKE-TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQ 217
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
+V + PD ++++ L +E + + ++ + F P+ Y ++A
Sbjct: 218 KVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH 277
Query: 495 CRAGRVEDGYLMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
C+A + E+ ++++ + S + +I G + + A K G+ L+
Sbjct: 278 CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEA 337
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFEL 610
+Y ++ + + EM G P+ ++ + H + ++E +E+
Sbjct: 338 PTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH---HLIRMQRSKEAYEV 394
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDK 669
Q S+ ++++ + R+ A++ +++++ + V+ +++ +I LC +K
Sbjct: 395 YQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
D A E EML VG+ P + L Q L R + +LV
Sbjct: 455 LDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 120/295 (40%), Gaps = 9/295 (3%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G + + ++KR F P Y IL+ +E L V E+ +M + P++V
Sbjct: 214 GDAQKVFDKMKKKR----FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVA 269
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
++ CK + A+ FN Q P+ + LI L + +A S
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
+G+ + T++ L A C ++++ + +D + PN+ TY + L R R +
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSK 389
Query: 502 DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+ Y + + +Y M+ F R D+A ++ EMK KG + ++ L
Sbjct: 390 EAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 562 LHMD--NPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
H + + +FN EM+ G +P +F+ + + D ++ M R
Sbjct: 450 CHENKLDEACEYFN--EMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 166/391 (42%), Gaps = 25/391 (6%)
Query: 477 ERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD--KVTARFSYAKMIMGFIKSNRGDI 534
++ F +S Y+ + +L + + + + + D+ K+ ++ ++A + + ++ +
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDN--PRTRFFNLLEMMTHGKPHCDIFNSFI 592
A +M+E G++++ S + +L L N + F+ ++ +P + +
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK-KRFEPDIKSYTILL 239
Query: 593 DGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VV 651
+G EV M+ G + + +++ ++ ++++ +A+RFFN++ +
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 652 VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
S ++ +I GL K + ALE G Y LV C +R +A
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKT 359
Query: 712 VNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM--------LTL 763
V+ G + +++L H + ++R KE + +M +
Sbjct: 360 VDEMRLKGVGPNARTYDIIL----------HHLIRMQRSKEAYEVYQTMSCEPTVSTYEI 409
Query: 764 IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRG 822
++ F R+ +I+ +E+ K ++ ++ L+ L H + +D+ACE F+ M G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 823 LEPNRWTYGLMAHGFSNHGRKDEAKRWVHEM 853
+ P + + + GRKD+ V +M
Sbjct: 470 IRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 6/266 (2%)
Query: 598 ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKL 656
A K A F M+ G +S ++ + +SR + DA + F+ ++ + K
Sbjct: 175 ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 234
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
Y ++ G + E+ EM G P + Y +++ C K+Y EA+ N E
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 294
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDL--RREKEGEFLDSSMLTLIIGAFSGCLRV 774
+ + + + L+ + + S + + ++ R + G L++ ++GA+ R+
Sbjct: 295 QRNCKPSPHIFCSLI-NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRM 353
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMA 834
+ + ++E+ K + TY++++ L M ++ E ++ EP TY +M
Sbjct: 354 EDAYKTVDEMRLKGVGPNARTYDIILHHLIR--MQRSKEAYEVYQTMSCEPTVSTYEIMV 411
Query: 835 HGFSNHGRKDEAKRWVHEMLKKGFNP 860
F N R D A + EM KG P
Sbjct: 412 RMFCNKERLDMAIKIWDEMKGKGVLP 437
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 172/402 (42%), Gaps = 42/402 (10%)
Query: 105 RVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRS 164
RV + D L + FD+A +QP F H+R++ + + L R L+ D L RS
Sbjct: 53 RVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRS 112
Query: 165 CSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNA 224
+P L+ YA A P+ L +M L+ + LN +
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKM----LEFNFTPQPKHLNRI-------- 160
Query: 225 FDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGV 284
DV+ + RGY L K L ++ + L+G++ + + + L+
Sbjct: 161 LDVLVSH---RGY------------LQKAFELFKS-SRLHGVMPNTRSYN-----LLMQA 199
Query: 285 LCESNRFERAVELVSEFGTSL-----PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
C ++ A +L FG L P ++Y + I+G + G+++ A+E + +G
Sbjct: 200 FCLNDDLSIAYQL---FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN-KG 255
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
FVP ++ Y L+ L R+ +L++ Y+LL M P++V N ++ FC+ A
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
++ + G SPN ++Y+ LI LC G E + L G+ P + L
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
C K++E D+++ ++ +S T+ + +C E
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 417
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 4/247 (1%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G L +A E F+ R G +P YN+L+ + L Y+L M E + P++ +
Sbjct: 169 GYLQKAFELFKSSR-LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
++ FC+ G V+ A+EL + G P+ ++Y L+ +LC +EAY++L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
G PD ++T+ CRE + + +LD L PNS +Y + LC G +
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 502 DG--YLMRGDLDKVTARFSYAK-MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
+G YL + FS + ++ GF + + A ++ + + G L ++ V+
Sbjct: 348 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 407
Query: 559 HCLLHMD 565
+ + D
Sbjct: 408 PLICNED 414
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 137/326 (42%), Gaps = 47/326 (14%)
Query: 547 YELKRSSYRHV--LHCLLHMDNPRTRFFNLLEMM-----THGKPHC-DIFNSFIDGAMHA 598
Y ++ ++RH H +L + R R+FNL++ + + G P +IF I A
Sbjct: 73 YASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEA 132
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR-RISDALRFFNDIR-HQVVVSTKL 656
P+ F M ++ R + A F R H V+ +T+
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
YN ++ C +D IA +L +ML+ + P ++ Y++L+Q C + A+ L++
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSY 776
G F+ + L + ++++ L R+ + LR +Y
Sbjct: 253 NKG-----FVPDRLSYTTLLN--------SLCRKTQ-------------------LREAY 280
Query: 777 SIQELEELIAKCFPVDIYTYNLLMRKLTHHD--MDKACELFDRMCQRGLEPNRWTYGLMA 834
+ +L C P D+ YN ++ D MD A ++ D M G PN +Y +
Sbjct: 281 KLLCRMKLKG-CNP-DLVHYNTMILGFCREDRAMD-ARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 835 HGFSNHGRKDEAKRWVHEMLKKGFNP 860
G + G DE K+++ EM+ KGF+P
Sbjct: 338 GGLCDQGMFDEGKKYLEEMISKGFSP 363
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 142/400 (35%), Gaps = 68/400 (17%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
A E F F + + ILI +L R + ++L + P ++
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAY-KYLILTLCWDGCPKEAYRVLRSSSGTGY 445
+ + + + L F +F +P + L + + G ++A+ + +SS G
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGV 186
Query: 446 FPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL 505
P+ R+++ L A C + + L LER +P
Sbjct: 187 MPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP----------------------- 223
Query: 506 MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
D+D SY +I GF + + + A LL +M KG+ R SY +L+ L
Sbjct: 224 ---DVD------SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKT 274
Query: 566 NPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQI 624
R + L M G P +N+ I G ++ AR+V + M NG N+ S
Sbjct: 275 QLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS-- 332
Query: 625 LVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
Y +I GLC D + EM+ G
Sbjct: 333 --------------------------------YRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
+P LV+ CS + EA ++V V K G L S
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHS 400
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 9/298 (3%)
Query: 242 TNVIVIKHLCKQGRLEEAEAH--LNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS 299
T +I++ H C+ + H LN +V +G E + + LCE+ R + A +L+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 300 EFGT--SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
E S P Y ++ L + L EF + RD P V + ILI +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
L++ L+ + P+ N ++ FC L A+ ++ + G+ P+ + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALE 477
LI L G +EA L++ GY PD T+++L N +CR+ + LL+
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 478 RRFMPNSSTYSRFVSALCRAGRVEDGY----LMRGDLDKVTARFSYAKMIMGFIKSNR 531
R PN TY+ + LC+A ++ G +M+ K+ + YA ++ +KS +
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN-GYATLVRSLVKSGK 420
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 7/307 (2%)
Query: 193 LLGRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQICMRGYESHMTNVIVIKHLC 251
+L M GL+ D I + SL E + A D++ T ++KHLC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 252 KQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVELVSEFGTS--LPL 307
K L ++ + ++ +SF LI +C S A+ LVS+ G + P
Sbjct: 206 KCKDLHVVYEFVDEMRDDF-DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 308 ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
Y ++G + EA+ +++ ++ EG P ++ YN LI L + R+++ L
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKE-EGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
M + P+ T +++ C+ G AL L G +PN Y L+ LC
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTY 487
+ + +G + ++TL +L + K+ E +++ D+A++ + + ++S Y
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
Query: 488 SRFVSAL 494
S + L
Sbjct: 444 STLETTL 450
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 155/393 (39%), Gaps = 49/393 (12%)
Query: 356 RENRLKDVYELLMDMNETC-IPPNMVTMNAVLCFFCKLGMVDVALELFNS--RSQFGLSP 412
+ L D L + T IP ++ N+VL + + +V+ ++LF +SQ P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 413 NYMAYKYLILTLC--WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
+ L+ C D +RVL G PD+ T +LC ++DE D
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL----MRGDLDKVTARFSYAKMIMGF 526
L+ E+ P++ TY+ + LC+ + Y MR D D S+ +I
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD 586
S A L+ ++ G+ KP C
Sbjct: 241 CNSKNLREAMYLVSKLGNAGF----------------------------------KPDCF 266
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDA---LRFF 643
++N+ + G +K A V++ M+ G+ + + ++ ++ R+ +A L+
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 644 NDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLK 703
D ++ +T Y ++ G+C+ ++ AL L EM G P+ Y L+ LC +
Sbjct: 327 VDAGYEPDTAT--YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 704 RYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
+ + L + + +G +L S G L S++
Sbjct: 385 LMDKGMELYEMMKSSGVKLESN-GYATLVRSLV 416
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 5/253 (1%)
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLC 665
V LM NG+ + + + ++S + R+ +A ++ + T YN ++ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 666 KSDKADIALELCFEMLK-VGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
K + E EM + P + + +L+ +C+ K EA+ LV+ AG +
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 725 FLGNVLLFH-SMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEE 783
FL N ++ +S V + ++EG D +I S RV + L+
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 784 LIAKCFPVDIYTYNLLMRKLTHHDMD-KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGR 842
++ + D TY LM + A L + M RG PN TY + HG
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 843 KDEAKRWVHEMLK 855
D+ ++EM+K
Sbjct: 386 MDKGME-LYEMMK 397
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 3/184 (1%)
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPE 739
M+ GL P ++ V+ LC R EA +L+ + ++ N LL H +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 740 --VYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
V + VD R+ D T++I + ++ + +L F D + YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 798 LLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
+M+ T +A ++ +M + G+EP++ TY + G S GR +EA+ ++ M+
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 857 GFNP 860
G+ P
Sbjct: 330 GYEP 333
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/552 (20%), Positives = 215/552 (38%), Gaps = 80/552 (14%)
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
L + G L ++E ++ RDS G+ +LIG R K ++ ++ +
Sbjct: 119 ALFRKGPLLLSMELLKEIRDS-GYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
P+ NAV+ K +D+A F G P+ Y LI +C G EA R+
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL-- 494
++ G P+ T++ L + ++DE L+ R+ PN +T FV +
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 495 ----CRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELK 550
C+A V G++ + D R Y ++ ++ + L ++ E+GY
Sbjct: 298 CLPPCKAFEVLVGFMEK---DSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPD 354
Query: 551 RSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFEL 610
S++ + CLL + +L+E C IF+ F+
Sbjct: 355 SSTFNAAMSCLL-------KGHDLVET-------CRIFDGFVS----------------- 383
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDK 669
G+ + ++++++ ++R S+ R+ + ++S+ YN +I LCK+ +
Sbjct: 384 ---RGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
+ A EM G++P++ + + S G+V
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGY------------------------SVRGDV 476
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF 789
H ++ + H G D +LII + + +E++
Sbjct: 477 KKVHGVLEKLLVH----------GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 790 PVDIYTYNLLMRK-LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
+ TYN+L+R + D D++ +LF +M + GL P+ + Y F + +A+
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 849 WVHEMLKKGFNP 860
+ ML+ G P
Sbjct: 587 LLKTMLRIGLKP 598
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 147/378 (38%), Gaps = 41/378 (10%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLD-------------------------LDGF- 207
+ L+ G+ IAG+ D AL L MR + L+ L GF
Sbjct: 253 YTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFM 312
Query: 208 ---------GYHILLNSLAENNCYNAFDVIANQICMRGY--ESHMTNVIVIKHLCKQGRL 256
GY +L L+ N+ +I RGY +S N + L K L
Sbjct: 313 EKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNA-AMSCLLKGHDL 371
Query: 257 EEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVW 314
E +G V G + + L+ L + RF + + G L + +Y
Sbjct: 372 VETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAV 431
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
I L + R++ A F + +D G P V +N + +K V+ +L +
Sbjct: 432 IDCLCKARRIENAAMFLTEMQD-RGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHG 490
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
P+++T + ++ C+ + A + F ++G+ PN + Y LI + C G +
Sbjct: 491 FKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSV 550
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
++ G PD ++ + C+ K+ + +LL L P++ TYS + AL
Sbjct: 551 KLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKAL 610
Query: 495 CRAGRVEDGYLMRGDLDK 512
+GR + M +++
Sbjct: 611 SESGRESEAREMFSSIER 628
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 187/511 (36%), Gaps = 82/511 (16%)
Query: 171 ARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIAN 230
R ++ ++ + D+A +MR G D F Y+IL++ + + + +
Sbjct: 180 TRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 231 QICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLN------------------------- 264
Q+ G ++ T I+I GR++EA L
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCL 299
Query: 265 ----------GLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYG 312
G + L R ++ L ++ + + + + G +P + +
Sbjct: 300 PPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFN 359
Query: 313 VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR-----YNILIGRLLRENRLKDVYELL 367
+ L++G L E F +GFV V+ Y +L+ LL R + L
Sbjct: 360 AAMSCLLKGHDLVETCRIF------DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
M + ++ + NAV+ CK ++ A G+SPN + + +
Sbjct: 414 KQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVR 473
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTY 487
G K+ + VL G+ PD TFS + N LCR +I + +D LE PN TY
Sbjct: 474 GDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITY 533
Query: 488 SRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
+ + + C G D D+ + +L +MKE G
Sbjct: 534 NILIRSCCSTG----------DTDR----------------------SVKLFAKMKENGL 561
Query: 548 ELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLARE 606
+Y + M + L M+ G KP +++ I + + ARE
Sbjct: 562 SPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEARE 621
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
+F ++R+G + ++ ++ LV + R +S
Sbjct: 622 MFSSIERHGCVPDSYTKRLVEELDLRKSGLS 652
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 11/411 (2%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+ GL++ GR EA F + EG P + Y L+ L R+ + L+ + +
Sbjct: 326 MNGLIERGRPQEAHSIFNTLIE-EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ P+ + NA++ + G +D A+++F + G P + LI G +E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 435 RVLRSSSGTGYF-PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSA 493
R+L P+ RT + L A C + KI+E W+++ P+ T++ A
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 494 LCRAGRV---EDGYLMRGDLDKVTARF-SYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
R G ED + R +KV + ++ G+ + + + A R MKE G
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 550 KRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH--GKPHCDIFNSFIDGAMHANKPDLAREV 607
+ ++ L++ N ++++M KP F++ ++ E+
Sbjct: 565 NLFVFNSLIKGFLNI-NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCK 666
+ M GI + + ++ K Y R+ A + N +R V + +Y ++I G C
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 667 SDKADIALELCFEMLK-VGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
+ + A+++ +M VGL+P++ YE L+ K+ ++A L+ E
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDME 734
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 151/351 (43%), Gaps = 45/351 (12%)
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEM 577
S K++ G I+ R A + + E+G++ +Y ++ L + F +LL +
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR----QKHFHSLLSL 376
Query: 578 MTHG-----KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
++ KP +FN+ I+ + + D A ++FE M+ +G AS+ ++K Y +
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 633 SRRISDALRFFN-DIRHQVV-VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
++ ++ R + +R +++ + + N ++ C K + A + ++M G+ P +
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE 750
+ L + Y + G T+ MI P + H+ V
Sbjct: 497 TFNTLAK----------------AYARIGSTCTA--------EDMIIPRMLHNKVKPNVR 532
Query: 751 KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK-LTHHDMD 809
G ++ G LR Y ++EL P +++ +N L++ L +DMD
Sbjct: 533 TCGTIVNGYCEE---GKMEEALRFFYRMKEL-----GVHP-NLFVFNSLIKGFLNINDMD 583
Query: 810 KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
E+ D M + G++P+ T+ + + +S+ G + +ML+ G +P
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 154/386 (39%), Gaps = 30/386 (7%)
Query: 191 LHLLGRMRFQGLDLDGFGYHILLNSLAE----NNCYNAFDVIANQICMRGYESHMTNVIV 246
L L+ ++ GL D ++ ++N+ +E + F+ + C + T +
Sbjct: 374 LSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNT---L 430
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGK-ELHRSELSFLIGVLCESNRFERAVELVSEFGTSL 305
IK K G+LEE+ L+ ++ + + + L+ C + E A +V +
Sbjct: 431 IKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM---- 486
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEG-FVP----CKVRYNI-----LIGRLL 355
+YGV +V L +A +E +P KV+ N+ ++
Sbjct: 487 ---QSYGV-KPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYC 542
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM 415
E ++++ M E + PN+ N+++ F + +D E+ + +FG+ P+ +
Sbjct: 543 EEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVV 602
Query: 416 AYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFA 475
+ L+ G K + G PD FS LA R + ++ +L+
Sbjct: 603 TFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Query: 476 LERRFMPNSSTYSRFVSALCRAGRVEDGYL----MRGDLDKVTARFSYAKMIMGFIKSNR 531
+ PN Y++ +S C AG ++ M G + +Y +I GF ++ +
Sbjct: 663 RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQ 722
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHV 557
A LL +M+ K R + + +
Sbjct: 723 PWKAEELLKDMEGKNVVPTRKTMQLI 748
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 140/632 (22%), Positives = 248/632 (39%), Gaps = 61/632 (9%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDE--ALEFFRQKRD 336
++GV S +F +A ELV +P ++ I ++ G L A+E R+
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
S G P + YN L+ R++ L ++ DM P++ T NA++ + + G+
Sbjct: 291 S-GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A LF G P+ + Y L+ + ++ V + G+ D T++T+
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 457 NALCRECKIDEMWDLL-DFALERRFMPNSSTYSRFVSALCRAGR-VEDGYLMRGDLD--- 511
+ ++ ++D L D P++ TY+ + +L +A R VE LM LD
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Query: 512 KVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
K T + +Y+ +I G+ K+ + + A M G + +Y +L LL + R +
Sbjct: 470 KPTLQ-TYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 572 FNLLEMMTHG-KPHCDIFNSFIDGAMHANKPD------------------------LARE 606
+M++ G P ++ I G M N+ D + E
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGE 588
Query: 607 VFELMQR-------NGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNR 659
F+L R NG + + ++ SY S R S+A ++ S +L
Sbjct: 589 CFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITE 648
Query: 660 MIVGL-CKSDKADIALELCFEMLKVGLNP--------SIECYEVLVQKLCSLKRYYEAVN 710
++ L CK + AL+ F +P S YE L+ + + Y EA
Sbjct: 649 ALIVLHCKVNNLSAALDEYFA------DPCVHGWCFGSSTMYETLLHCCVANEHYAEASQ 702
Query: 711 LVNVYEKAGRRLTSFL--GNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAF 768
+ + +G + + V+++ + PE H V+ K F S M T II A+
Sbjct: 703 VFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAY 762
Query: 769 SGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNR 827
+ + L D+ T+N LM ++A +F+ M + G P
Sbjct: 763 GKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTV 822
Query: 828 WTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFN 859
+ ++ H GR +E V E+ GF
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGFK 854
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 146/733 (19%), Positives = 280/733 (38%), Gaps = 66/733 (9%)
Query: 187 PDIALHLLGRMRFQGLDLDGFGYHILLNSLA-ENNCYNAFDVIANQICMRGYESHMTNVI 245
P++A+ LL +R GL D Y+ LL++ + ++N A V + R T
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE----- 300
+I + G EAE L G + L+ E+ E+ +
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 301 FGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
FG E Y I + G+LD AL+ ++ + G P + Y +LI L + NR
Sbjct: 398 FGKD---EMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRT 454
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+ L+ +M + I P + T +A++C + K G + A + F+ + G P+ +AY +
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRF 480
+ L ++A+ + R G+ P + + L +E + D++ + E
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG 574
Query: 481 MPNSSTYSRFVSALC--RAGR-----VEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGD 533
M S V C A R + +GY + D + ++ + S R
Sbjct: 575 MNPLEISSVLVKGECFDLAARQLKVAITNGYELEND--------TLLSILGSYSSSGRHS 626
Query: 534 IAARLLVEMKEKGYELKR--SSYRHVLHCLL---------HMDNP---------RTRFFN 573
A LL +KE KR + VLHC + + +P T +
Sbjct: 627 EAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYET 686
Query: 574 LLEMMTHGKPHCDIFNSFID---GAMHANK---------------PDLAREVFELMQRNG 615
LL + + + F D A++ P+ A +V + G
Sbjct: 687 LLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKG 746
Query: 616 IMTNASSQIL-VMKSYFRSRRISDALRFFNDIRHQV-VVSTKLYNRMIVGLCKSDKADIA 673
S ++++Y + + A ++R K +N ++ + + A
Sbjct: 747 FHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERA 806
Query: 674 LELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFH 733
+ M++ G +P++E +L+ LC R E +V + G +++ ++L
Sbjct: 807 RAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDA 866
Query: 734 SMISPEVYHSCVDLRREKEGEFLDSSML-TLIIGAFSGCLRVSYSIQELEELIAKCFPVD 792
+ ++ K +L + L ++I RV + + E+ F V+
Sbjct: 867 FARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVE 926
Query: 793 IYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
+ +N +++ T D K +++ R+ + GLEP+ TY + + R +E +
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 852 EMLKKGFNPPENT 864
+M G +P +T
Sbjct: 987 QMRNLGLDPKLDT 999
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 165/427 (38%), Gaps = 41/427 (9%)
Query: 334 KRDSEGF-VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKL 392
+ +++GF C Y +I ++ + ++ ++ ++ P++ T N+++ + +
Sbjct: 741 QAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 393 GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTF 452
G + A +FN+ + G SP + L+ LC DG +E Y V+ G+ + +
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI 860
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
+ +A R I E+ + ++P Y + LC+ RV D +M ++++
Sbjct: 861 LLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 513 VTARFSYA---KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
+ A M+ + ++ +KE G E ++Y ++ P
Sbjct: 921 ANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEE 980
Query: 570 RFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFE------------------- 609
+ + +M G P D + S I + A ++FE
Sbjct: 981 GYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMK 1040
Query: 610 ----------------LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVV 652
+M+ GI ++ L+M SY S +A + ++++ +V +
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVEL 1100
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
+T Y+ +I +S + +E EM K GL P + V+ K E + L+
Sbjct: 1101 TTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLL 1160
Query: 713 NVYEKAG 719
E G
Sbjct: 1161 KALEDIG 1167
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/427 (19%), Positives = 169/427 (39%), Gaps = 45/427 (10%)
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKH 249
A ++G +R G D ++ L+++ A+ CY I N + G + ++ ++ H
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 250 -LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLE 308
LC GRLEE + L G ++ +S + ++ + F RA
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLML------DAFARA-------------- 870
Query: 309 NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLM 368
G + E + + + + G++P Y ++I L + R++D ++
Sbjct: 871 -------------GNIFEVKKIYSSMK-AAGYLPTIRLYRMMIELLCKGKRVRDAEIMVS 916
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
+M E + N++L + + ++++ + GL P+ Y LI+ C D
Sbjct: 917 EMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDR 976
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
P+E Y +++ G P T+ +L +A ++ +++ L + L + + S Y
Sbjct: 977 RPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYH 1036
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKM---IMGFIKSNRGDIAARLLVEMKEK 545
+ +G + + + A M ++ + S A ++L +K+
Sbjct: 1037 TMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDT 1096
Query: 546 GYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLA 604
EL Y V+ L + + LLEM G +P I+ F+ A +
Sbjct: 1097 EVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAA------SFS 1150
Query: 605 REVFELM 611
+E E+M
Sbjct: 1151 KEKIEVM 1157
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 144/332 (43%), Gaps = 11/332 (3%)
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
PN + A+L + +A+E+F +R++ + Y ++ G +A +
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIF-TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDE--MWDLLDFALERRFMPNSSTYSRFVSAL 494
+ + G PD +F+TL NA + + +LLD P++ TY+ +SA
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSAC 307
Query: 495 CRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
R ++ + D++ + ++Y MI + + A RL +E++ KG+
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 552 SSYRHVLHCLLHMDNPRT--RFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFE 609
+Y +L+ N + ++ M GK +N+ I + DLA ++++
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM-TYNTIIHMYGKQGQLDLALQLYK 426
Query: 610 LMQR-NGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST-KLYNRMIVGLCKS 667
M+ +G +A + +++ S ++ R +A +++ + T + Y+ +I G K+
Sbjct: 427 DMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKA 486
Query: 668 DKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
K + A + ML+ G P Y V++ L
Sbjct: 487 GKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 23/255 (9%)
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST-KLYNRMIVGLC 665
V E +Q G + SS +L++ ++ R+ I + + ++ ++ + T +LY MI LC
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLC 903
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
K + A + EM + + + +++ +++ Y + V + ++ G
Sbjct: 904 KGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDET 963
Query: 726 LGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL-----------IIGAFSGCLRV 774
N L+ +Y C D RR +EG L M L +I AF +
Sbjct: 964 TYNTLII-------MY--CRD-RRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMD-KACELFDRMCQRGLEPNRWTYGLM 833
+ Q EEL++K +D Y+ +M+ D KA +L M G+EP T L+
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 834 AHGFSNHGRKDEAKR 848
+S+ G EA++
Sbjct: 1074 MVSYSSSGNPQEAEK 1088
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 181/453 (39%), Gaps = 48/453 (10%)
Query: 289 NRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
R V+LVS+FG P + + LV+ +D A EFF +K + G Y
Sbjct: 129 KRVISVVDLVSKFGIK-PSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYG 186
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
IL+ L NR+ D ++LL M + + PN V N +L CK G V A L + +
Sbjct: 187 ILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE- 245
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
PN + + LI C + ++ +L G+ PD T + + LC E ++ E
Sbjct: 246 ---PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEA 302
Query: 469 WDLLD----------------------------------FALERR-FMPNSSTYSRFVSA 493
++L+ +ER+ ++PN TY+ ++
Sbjct: 303 LEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAG 362
Query: 494 LCRAGRVEDGYLMRGDLDKVTARFSYAK---MIMGFIKSNRGDIAARLLVEMKEKG--YE 548
C G ++ D+ R+++A +I G R D ++L M++ +
Sbjct: 363 YCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG 422
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVF 608
+ Y V++ + LL+M D I DL
Sbjct: 423 ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 609 ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKS 667
+++ G+ + S L+ + Y + +I ++L ND + + + +N +I+G CK
Sbjct: 483 QMIGEGGVPSIIVSHCLIHR-YSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQ 541
Query: 668 DKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
DK ++ +M + G P E Y L+++LC
Sbjct: 542 DKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 5/264 (1%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL 305
++K C G++ A+ + G + + LI C+ + A++ ++ T
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 306 PLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR-YNILIGRLLRENRLKD 362
N + IRGL GGR D+ L+ +DS+ ++ YN +I +ENR +D
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWED 443
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
E L+ M + + P V + L C+ G +D ++ G P+ + LI
Sbjct: 444 ALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
G +E+ ++ GY P TF+ + C++ K+ ++ ER +P
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 483 NSSTYSRFVSALCRAGRVEDGYLM 506
++ +Y+ + LC G ++ +L+
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLL 585
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/546 (19%), Positives = 201/546 (36%), Gaps = 74/546 (13%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC-IPPNMVTMNAV 385
ALE FR GF+ + Y L +L R VY+LL +M ++ +PP+ +
Sbjct: 59 ALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTI 118
Query: 386 LCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGY 445
+ F + ++ + + + S+FG+ P+
Sbjct: 119 IRGFGRARLIKRVISVVDLVSKFGIKPSL------------------------------- 147
Query: 446 FPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL 505
+ F+++ + L +E D + R F F + +G
Sbjct: 148 ----KVFNSILDVLVKE----------DIDIAREF---------FTRKMMASG------- 177
Query: 506 MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
+ GD+ ++Y ++ G +NR +LL MK G Y +LH L +
Sbjct: 178 IHGDV------YTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK-N 230
Query: 566 NPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQIL 625
R +L+ M +P+ FN I + K + + E G + + +
Sbjct: 231 GKVGRARSLMSEMK--EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 626 VMKSYFRSRRISDALRFFNDIRHQV-VVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
VM+ R+S+AL + + V N ++ G C K +A EM + G
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSC 744
P++E Y +L+ C + A++ N + R N L+ I
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL 408
Query: 745 VDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIA--KCFPVDIYTYNLLMRK 802
L ++ + + + + G + + LE L+ K FP + L+
Sbjct: 409 KILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISL 468
Query: 803 LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPE 862
MD +D+M G P+ + H +S HG+ +E+ +++M+ +G+ P
Sbjct: 469 CEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRS 528
Query: 863 NTRNVI 868
+T N +
Sbjct: 529 STFNAV 534
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 12/298 (4%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE----NNCYNAFDVIAN 230
+TLV GY GK +A M +G + Y++L+ + ++ + F+ +
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 231 QICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSEL---SFLIGVLCE 287
+ + T +I+ L GR ++ L ++ +H + + + +I +
Sbjct: 382 DAIRWNFATFNT---LIRGLSIGGRTDDGLKILE-MMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 288 SNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRY 347
NR+E A+E + + P + L + G +D+ + Q EG VP +
Sbjct: 438 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMI-GEGGVPSIIVS 496
Query: 348 NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ 407
+ LI R + ++++ EL+ DM P T NAV+ FCK V ++ ++
Sbjct: 497 HCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
G P+ +Y L+ LC G ++A+ + PD +S+L L ++ I
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAI 614
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 120/544 (22%), Positives = 225/544 (41%), Gaps = 63/544 (11%)
Query: 333 QKRDSEGFVPCKVRYNILIGRLLRENRLKD----VYELLMDMNETCIPPNMVTMNAVLCF 388
+K +GF+P NI++ ++LR++R+ + VYE ++ E I P ++T N +L
Sbjct: 192 EKMIRKGFLPSVRNCNIVL-KVLRDSRMMNKASAVYETMI---EHGIMPTVITFNTMLDS 247
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
K G ++ +++ + + + + Y LI +G +EA R +G+
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRG 508
+F+ L C++ D+ W + D L P +STY+ ++ ALC GR++D R
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA---RE 364
Query: 509 DLDKVTAR--FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
L + A SY ++ G+IK + A+ L +++ +Y ++ L N
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 567 PRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQIL 625
EM T P + + + G + +A EV++ M R GI + +
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 626 VMKSYFRSRRISDALRFFNDIRHQVVVST-------KLYNRMIVGLCKSDKADIALELCF 678
R A R H+ +V+T +YN I GLCK A+E
Sbjct: 485 RAVGELRLGDSDKAFRL-----HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISP 738
++ +VGL P Y +++ ++ A NL + M+
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL--------------------YDEMLRK 579
Query: 739 EVYHSCVDLRREKEGEFLDSSMLTLIIG-AFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
+Y S + + LI G A +G R+ + Q E+ + ++ T+N
Sbjct: 580 RLYPSVI-------------TYFVLIYGHAKAG--RLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 798 LLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
L+ + ++D+A +M + G+ PN+++Y ++ + + +E + EML K
Sbjct: 625 ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Query: 857 GFNP 860
P
Sbjct: 685 EIEP 688
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 159/398 (39%), Gaps = 43/398 (10%)
Query: 197 MRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE-SHMTNVIVIKHLCKQGR 255
M+ + ++ Y+IL+N ++N + G+ + + +I+ CKQG
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 256 LEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWI 315
++A + ++ +G S + I LC+ R + A EL+S P +Y +
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA--PDVVSYNTLM 381
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
G ++ G+ EA F R + P V YN LI L L+ L +M I
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGD-IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY------------------ 417
P+++T ++ F K G + +A E+++ + G+ P+ AY
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 418 --KYLILT----------------LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+ ++ T LC G +A R G PD T++T+
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR--- 516
+ +L D L +R P+ TY + +AGR+E + ++ K R
Sbjct: 561 LENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNV 620
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSY 554
++ ++ G K+ D A R L +M+E+G + SY
Sbjct: 621 MTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 182/440 (41%), Gaps = 26/440 (5%)
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG---RV 500
G+ P R + + L +++ + + +E MP T++ + + +AG RV
Sbjct: 198 GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERV 257
Query: 501 EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+ +L + + +Y +I GF K+ + + A R +M+ G+ + S+ ++
Sbjct: 258 DKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEG 317
Query: 561 LLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+ EM+ G P +N +I + D ARE+ M +++
Sbjct: 318 YCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSY 377
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIR----HQVVVSTKLYNRMIVGLCKSDKADIALE 675
+ +M Y + + +A F+D+R H +V+ YN +I GLC+S + A
Sbjct: 378 NT----LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT---YNTLIDGLCESGNLEGAQR 430
Query: 676 LCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSM 735
L EM + P + Y LV+ A VY++ R+ G ++
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE---VYDEMLRKGIKPDGYAYTTRAV 487
Query: 736 ISPEVYHSCVDLRREKEGEFLD--SSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPV-- 791
+ S R +E D + LT+ G +V ++ +E K F V
Sbjct: 488 GELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGL 546
Query: 792 --DIYTYNLLMRK-LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
D TY ++R L + A L+D M ++ L P+ TY ++ +G + GR ++A +
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 849 WVHEMLKKGFNPPENTRNVI 868
+ EM K+G P T N +
Sbjct: 607 YSTEMKKRGVRPNVMTHNAL 626
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 5/318 (1%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ GY GK A L +R + Y+ L++ L E+ + ++
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 234 MR-GYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSG-KELHRSELSFLIGVL--CESN 289
+ + +T ++K K G L A + ++ G K + + +G L +S+
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 290 RFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
+ R E + P Y V I GL + G L +A+EF R K G VP V Y
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR-KIFRVGLVPDHVTYTT 555
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
+I L + K L +M + P+++T ++ K G ++ A + + G
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
+ PN M + L+ +C G EAYR L G P++ +++ L + C K +E+
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVV 675
Query: 470 DLLDFALERRFMPNSSTY 487
L L++ P+ T+
Sbjct: 676 KLYKEMLDKEIEPDGYTH 693
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 149/398 (37%), Gaps = 69/398 (17%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++ L+ G++ GK + A G MR G + + ++ L+ + ++ + +++
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 234 MRG-YESHMTNVIVIKHLCKQGRLEEAEAHLN---------------GLVGSGK------ 271
G Y + T I I LC GR+++A L+ G + GK
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 272 --------ELHRSELSF--LIGVLCESNRFERAVELVSEFGTSL--PLENAYGVWIRGLV 319
++H S +++ LI LCES E A L E T L P Y ++G V
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 320 QGGRLDEALEFF----RQKRDSEGFV-------------------------------PCK 344
+ G L A E + R+ +G+ P
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
YN+ I L + L E + + P+ VT V+ + + G +A L++
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ L P+ + Y LI G ++A++ G P+ T + L +C+
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
IDE + L E PN +Y+ +S C + E+
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEE 673
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 139/614 (22%), Positives = 238/614 (38%), Gaps = 98/614 (15%)
Query: 172 RYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQ 231
R LV Y G D A +L + + +D + L+N + E + Q
Sbjct: 147 RVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQ 206
Query: 232 ICMRGY-ESHMTNVIVIKHLCKQGRLEEA-------------EAHLNGLVGSG------- 270
+ G + T IV+K LC++G LEEA + +NGL +G
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVA 266
Query: 271 --------KELHRSELSFLIGVL----CESNRFERAVELVSE-----FG----------- 302
K L +L ++G++ C + + A ++ E FG
Sbjct: 267 LILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVID 326
Query: 303 ---TSLPLENAYGVWIRGLVQGGRLD------------------EALEFFRQKRDSEGFV 341
++ L A G + L +G +++ EALE F++ RD F+
Sbjct: 327 RYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFL 386
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
+V YN+ L + R+++ +ELL +M + I P+++ ++ +C G V AL+L
Sbjct: 387 D-RVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
+ G+SP+ + Y L+ L +G +E + G P+ T S + LC
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCF 505
Query: 462 ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAK 521
K+ E D +LE++ N ++ FV C AG + Y L+ + Y K
Sbjct: 506 ARKVKEAEDFFS-SLEQKCPENKAS---FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK 561
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
+ + A +L +M E RS ++ ++N R M+ G
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR-------- 632
P + I N+ A +FE M++ GI + + +++ Y +
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHET 681
Query: 633 --------SRRISDALRFFN--DIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLK 682
R+ S+ LR F+ I VV T L +R CK + + A EL M+
Sbjct: 682 CSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQ----CKMNNLEQAAELFDRMID 737
Query: 683 VGLNPSIECYEVLV 696
GL P + Y L+
Sbjct: 738 SGLEPDMVAYTTLI 751
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 190/466 (40%), Gaps = 54/466 (11%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF-GTS 304
VI CK L EA L+ ++G G +++ +S ++ C+ + A+E EF +
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 305 LPLENA-YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
+ L+ Y V L + GR++EA E ++ +D G VP + Y LI + ++ D
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD-RGIVPDVINYTTLIDGYCLQGKVVDA 442
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L+ +M + P+++T N ++ + G + LE++ G PN + +I
Sbjct: 443 LDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Query: 424 LCW---------------DGCPKEAYRVLRSSSGTGY------------FPDRRT-FSTL 455
LC+ CP+ ++ G +P R++ + L
Sbjct: 503 LCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKL 562
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA 515
+LC E +++ D+L R P S + + A C+ V + ++ D +
Sbjct: 563 FFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL---FDTMVE 619
Query: 516 R------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNP-- 567
R F+Y MI + + N A L +MK++G + +Y +L L +D
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 568 ----------RTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNG 615
+ + +L + D+ + ID N + A E+F+ M +G
Sbjct: 680 ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMI 661
+ + + ++ SYFR I A+ ++ + + ++ + +
Sbjct: 740 LEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAV 785
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 26/402 (6%)
Query: 128 RQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKP 187
R + R + F LS F+ L++ + + TL+ GY + GK
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 188 DIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESH-MTNVIV 246
AL L+ M G+ D Y++L++ LA N I ++ G + + +TN ++
Sbjct: 440 VDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVI 499
Query: 247 IKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLP 306
I+ LC +++EAE + L E ++ SF+ G CE+ ++A + P
Sbjct: 500 IEGLCFARKVKEAEDFFSSLEQKCPE---NKASFVKG-YCEAGLSKKAYKAFVRL--EYP 553
Query: 307 LENAYGVWIR---GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
L + V+I+ L G L++A + + K + P + +IG + N +++
Sbjct: 554 LRKS--VYIKLFFSLCIEGYLEKAHDVLK-KMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY-----K 418
L M E + P++ T ++ +C+L + A LF Q G+ P+ + Y +
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDR 670
Query: 419 YLIL--------TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
YL L ++ + ++A VLR S G D ++ L + C+ +++ +
Sbjct: 671 YLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE 730
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
L D ++ P+ Y+ +S+ R G ++ + +L K
Sbjct: 731 LFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 183/418 (43%), Gaps = 24/418 (5%)
Query: 318 LVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
L++ GR EA F+ ++ G P + Y L+ + + + + ++ ++ ++
Sbjct: 55 LIERGRPHEAQTVFKTLAET-GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKL 113
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
+ + NAV+ F + G ++ A++ + GL+P Y LI G P+ + +L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 438 R---SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
P+ RTF+ L A C++ K++E W+++ E P++ TY+ A
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--AT 231
Query: 495 CRAGRVEDGYLMRGDLDKVTARFSYAK----------MIMGFIKSNRGDIAARLLVEMKE 544
C V+ G +R + + V K ++ G+ + R R + MKE
Sbjct: 232 CY---VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 545 KGYELKRSSYRHVLHCLLH-MDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKP 601
E + +++ + MD R +L +M D+ +++ ++ A
Sbjct: 289 MRVEANLVVFNSLINGFVEVMD--RDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMI 661
+ A +VF+ M + G+ +A + ++ K Y R++ A + + + ++ +I
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVI 406
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
G C + D A+ + +M K G++P+I+ +E L+ +K+ ++A ++ + G
Sbjct: 407 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 464
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 133/319 (41%), Gaps = 29/319 (9%)
Query: 568 RTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAR-----EVFELMQRNGIMTNASS 622
RT+ N+L + G+PH + F A ++P L + ++ G +++ S
Sbjct: 48 RTKLMNVL--IERGRPH-EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 623 QI-------------LVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVG---LC 665
++ V+ ++ S + DA++ ++ + +T YN +I G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
K +++ L+L E V + P+I + VLVQ C K+ EA +V E+ G R +
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 726 LGNVLLFHSMISPEVYHSCVDLRRE---KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELE 782
N + + E + ++ + KE + +++G + RV ++ +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 783 ELIAKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHG 841
+ ++ +N L+ D D E+ M + ++ + TY + + +S+ G
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 842 RKDEAKRWVHEMLKKGFNP 860
++A + EM+K G P
Sbjct: 345 YMEKAAQVFKEMVKAGVKP 363
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 124/519 (23%), Positives = 224/519 (43%), Gaps = 26/519 (5%)
Query: 183 IAGKPDIALHLLGRMRFQGLDLDGFGYHI-LLNSLAENNCYNAFDVIANQICMRGYESHM 241
I KPDIA R Q ++ L++ LA + ++++I + +E M
Sbjct: 128 IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI--KKFEFPM 185
Query: 242 T---NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCES---NRFERAV 295
T +IK K G +EE + +G E +FL+ L + + ER
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 296 ELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
E V E G P Y I+G + G+ +A+E R ++ G K+ Y +I
Sbjct: 246 E-VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRD-METRGHEADKITYMTMIQACY 303
Query: 356 RENRLKDVYELLMDMNETCI--PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
++ L +M+E I PP+ ++ V+ CK G ++ +F + + G PN
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSL--VIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 414 YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
Y LI G ++A R+L G+ PD T+S + N LC+ +++E D
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 474 FALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL-DKVTARFSYA--KMIMGFIKSN 530
NS YS + L +AGRV++ + ++ +K R SY +I F K
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHR 481
Query: 531 RGDIAARLLVEM-KEKGYELKRSSYRHVLHCLL--HMDNPRTRFFNLLEMMTHG-KPHCD 586
+ D A L M +E+G + +Y +L + H + + +++ M+ G P
Sbjct: 482 KVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM--MIDKGITPTAA 539
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
F + G + K A ++ + + G++ +A+ + ++ + ++ RI +A + + I
Sbjct: 540 CFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLADGI 598
Query: 647 RHQV-VVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
+ V ++ MI L K KAD+A++L + +G
Sbjct: 599 TERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 182/437 (41%), Gaps = 53/437 (12%)
Query: 142 IFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQG 201
+F ++ R++P + + +T++ GY AG+ A+ L M +G
Sbjct: 244 VFEVMESGRIKPDIVTY----------------NTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 202 LDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE--SHMTNVIVIKHLCKQGRLEEA 259
+ D Y ++ + ++ + + + ++ +G + H + +VI LCK+G+L E
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS-LVIGGLCKEGKLNEG 346
Query: 260 EAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRG 317
++ G + + + + LI +S E A+ L+ P Y V + G
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 318 LVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
L + GR++EAL++F R +G + Y+ LI L + R+ + L +M+E
Sbjct: 407 LCKNGRVEEALDYFHTCR-FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNS-RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
+ NA++ F K VD A+ LF + G Y L+ + + +EA ++
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 437 LRSSSGTGYFPDRRTFSTLANALC------RECKI-DE---MWDLLDFALERRFMPNSST 486
G P F L+ LC R CKI DE M +LD A E
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACE--------- 576
Query: 487 YSRFVSALCRAGRVE------DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLV 540
++ LC+AGR++ DG RG +V R MI K + D+A +L+
Sbjct: 577 --DMINTLCKAGRIKEACKLADGITERG--REVPGRIRTV-MINALRKVGKADLAMKLMH 631
Query: 541 EMKEKGYELKRSSYRHV 557
GYE S R V
Sbjct: 632 SKIGIGYERMGSVKRRV 648
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/501 (20%), Positives = 190/501 (37%), Gaps = 64/501 (12%)
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
P + NA++ F KLGMV+ L ++ + G+ P Y +L+
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLM-------------- 229
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
N L +D + + R P+ TY+ + C
Sbjct: 230 ---------------------NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYC 268
Query: 496 RAGRVEDGYLMRGDLDK---VTARFSYAKMIMG-FIKSNRGDIAARLLVEMKEKGYELKR 551
+AG+ + D++ + +Y MI + S+ G A L EM EKG ++
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA-LYQEMDEKGIQVPP 327
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFEL 610
++ V+ L + M+ G KP+ I+ IDG + + A +
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDK 669
M G + + +V+ ++ R+ +AL +F+ R + +++ Y+ +I GL K+ +
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVN-VYEKAGRRLTSFLGN 728
D A L EM + G CY L+ ++ EA+ L + E+ G T +
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 729 VLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLR-----------VSYS 777
+LL R +E L M+ I + C R V+ +
Sbjct: 508 ILL----------SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 778 IQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGF 837
+ L+EL +D +++ + +AC+L D + +RG E +M +
Sbjct: 558 CKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINAL 617
Query: 838 SNHGRKDEAKRWVHEMLKKGF 858
G+ D A + +H + G+
Sbjct: 618 RKVGKADLAMKLMHSKIGIGY 638
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 144/385 (37%), Gaps = 79/385 (20%)
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLL 539
F+ N + FV + R V + ++ D+ +Y MI G+ K+ + A L
Sbjct: 227 FLMNGLVSAMFVDSAERVFEVMESGRIKPDI------VTYNTMIKGYCKAGQTQKAMEKL 280
Query: 540 VEMKEKGYELKRSSYRHVLH-CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHA 598
+M+ +G+E + +Y ++ C D F S +
Sbjct: 281 RDMETRGHEADKITYMTMIQACYADSD----------------------FGSCV------ 312
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF-NDIRHQVVVSTKLY 657
+++ M GI + LV+ + ++++ F N IR + +Y
Sbjct: 313 -------ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 658 NRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEK 717
+I G KS + A+ L M+ G P + Y V+V LC R EA++
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY------ 419
Query: 718 AGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYS 777
+H+C +G ++S + +I RV +
Sbjct: 420 -----------------------FHTC-----RFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 778 IQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRM-CQRGLEPNRWTYGLMAH 835
+ EE+ K D Y YN L+ T H +D+A LF RM + G + +TY ++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 836 GFSNHGRKDEAKRWVHEMLKKGFNP 860
G R +EA + M+ KG P
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITP 536
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 136/635 (21%), Positives = 245/635 (38%), Gaps = 64/635 (10%)
Query: 257 EEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVW 314
+EA L+GL G LS +I LC++ RF+ A F S +P E V
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 315 IRGLVQG-------GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
I L+ G + + F ++ FVP YN L+ +L R+ D ++L+
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKE------FVPSLTNYNRLMNQLCTIYRVIDAHKLV 185
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
DM P++VT ++ +C++ ++VA ++F+ G+ PN + LI
Sbjct: 186 FDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI------ 239
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTY 487
G F R T + E+W+ + + ++ +
Sbjct: 240 ----------------GGFLKMRDVETGRKLM------KELWEYMKNETDTSM--KAAAF 275
Query: 488 SRFVSALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKE 544
+ V ++CR G D + + ++ + V F+Y MI + R AAR++ MK
Sbjct: 276 ANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKS 335
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK--PHCDIFNSFIDGAMHANKPD 602
KG + +R+SY ++H L D R + LLE + + P + ++
Sbjct: 336 KGLKPRRTSYNAIIHGLCK-DGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 603 LAREVFELMQRNGIMTNASSQILVMKSYFRSRRISD-ALRFFNDIRHQVVVSTK----LY 657
AR V ELM R + + + Y R + D N + + +
Sbjct: 395 KARNVLELMLRK----EGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 658 NRMIVGLCKSDKADIALELCFEMLKVGL-NPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
N +I GLCK + D A+++ +M+ P ++ L + R EA++++N
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDL--RREKEGEFLDSSMLTLIIGAFSGCLRV 774
+ + + + + + + EK DS+ +II +V
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLM 833
+ + +++I D + Y ++ L + AC + G PN Y +
Sbjct: 571 DMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTV 630
Query: 834 AHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
S G K EA + + EM K G P T ++
Sbjct: 631 IAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 112/533 (21%), Positives = 216/533 (40%), Gaps = 47/533 (8%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF---- 301
++ LC R+ +A + + G + LIG CE E A ++ E
Sbjct: 168 LMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCG 227
Query: 302 --GTSLPLENAYGVWIRGL-VQGGR--LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR 356
SL L G +++ V+ GR + E E+ + + D+ + L+ + R
Sbjct: 228 IRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAA---FANLVDSMCR 284
Query: 357 ENRLKDVYELLMDMNETCIPPNM-VTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM 415
E D++E+ +M+ C N+ ++ C+ A + GL P
Sbjct: 285 EGYFNDIFEIAENMS-LCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRT 343
Query: 416 AYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFA 475
+Y +I LC DG AY++L S +FP T+ L +LC+E + ++L+
Sbjct: 344 SYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELM 403
Query: 476 LERRFMPNSSTYSRFVSALCRAGRVED-----GYLMRGDLDKVTARFSYAKMIMGFIKSN 530
L + + Y+ ++ LC + +++GD ++ +I G K
Sbjct: 404 LRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP--DEYTLNTVINGLCKMG 461
Query: 531 RGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM---THGKPHCDI 587
R D A ++L +M + + + + C L ++L + KP
Sbjct: 462 RVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVA 521
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI- 646
+N+ I G +K D A VF +++ + ++++ +++ + ++ A +F++D+
Sbjct: 522 YNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Query: 647 ----RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS- 701
RH V Y + GLC+S A +++ G P++ CY ++ + CS
Sbjct: 582 WPSGRHDAFV----YAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAE-CSR 636
Query: 702 --LKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKE 752
LKR EA ++ K G+ + +L + H +DL E+E
Sbjct: 637 SGLKR--EAYQILEEMRKNGQAPDAVTWRIL--------DKLHDSMDLTVERE 679
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 142/352 (40%), Gaps = 35/352 (9%)
Query: 224 AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNG-----------------L 266
AF + + +C GY + + + LC+ +E A H+ +
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 267 VGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS---LPLENAYGVWIRGL---VQ 320
G + R+ + +I LC+ RA +L+ E G+ P E Y + + L +
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE-GSEFEFFPSEYTYKLLMESLCKELD 392
Query: 321 GGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMV 380
G+ LE +K EG ++ YNI + L + ++ +L+ M + P+
Sbjct: 393 TGKARNVLELMLRK---EGADRTRI-YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEY 448
Query: 381 TMNAVLCFFCKLGMVDVALELFNS--RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL- 437
T+N V+ CK+G VD A+++ + +F +P+ + ++ L G +EA VL
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKF-CAPDAVTLNTVMCGLLAQGRAEEALDVLN 507
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
R P ++ + L + K DE + + +S+TY+ + LC
Sbjct: 508 RVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVT 567
Query: 498 GRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+V+ D+ + R F YA + G +S A L ++ + G
Sbjct: 568 NKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 139/331 (41%), Gaps = 33/331 (9%)
Query: 372 ETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPK 431
E+C N+ +N ++ F KLG A ++F+ +FG +PN Y + LC
Sbjct: 224 ESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMD 283
Query: 432 EAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFV 491
A V +G + + C+E K +E + + + A + S RFV
Sbjct: 284 WACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKE----KSLPPRFV 339
Query: 492 SALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
+ L A DG + F + GD++ E + +G +
Sbjct: 340 ATLITALCKNDGTIT-------------------FAQEMLGDLSG----EARRRGIK--- 373
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFEL 610
+ V+H L M N + LL+M++ G P +FN + D A+EV +L
Sbjct: 374 -PFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL 432
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDK 669
M+ G+ + + +++ Y + + +A + + + +S Y+ +I G CK ++
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
D AL+L EM + G+ P+ + Y L+Q C
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFC 523
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 145/388 (37%), Gaps = 63/388 (16%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPL----VFD 157
FV+RV G G L ++F WA + T T+ V + + R + ++D
Sbjct: 159 FVVRVFESPGISGKNL--IRFLKWATQNEEITVT-TSLVESLLVAIASDTRRMDAYGLWD 215
Query: 158 FLRDF---RSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
+++ SC + ++ L+ + GK A + + G + Y++ L
Sbjct: 216 LVKEIGEKESCGVLNLEILNE-LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLE 274
Query: 215 SLAENNCYNAFDVIANQICMRGYES-------HMTNVIVIKHLCKQGRLEEA-------- 259
+L C +F A +C + +S M N+I CK+G+ EEA
Sbjct: 275 AL----CKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT--WFCKEGKAEEAYSVYELAK 328
Query: 260 ----------------------------EAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
+ L L G + S +I LC
Sbjct: 329 TKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNV 388
Query: 292 ERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
+ A L+ + + P + + + + G LDEA E + +S G P Y +
Sbjct: 389 KDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKL-MESRGLKPDVYTYTV 447
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
+I + + + E+L + + + VT +A++ +CK+ D AL+L N +FG
Sbjct: 448 IISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFG 507
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVL 437
+ PN Y LI + C E VL
Sbjct: 508 VQPNADEYNKLIQSFCLKALDWEKAEVL 535
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 181/434 (41%), Gaps = 45/434 (10%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P + Y I L+Q G+ ++ E + + + P + Y+ LI + R
Sbjct: 195 PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIR 254
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
L +M + C+ P +L + K+G V+ AL+LF + G SP Y LI L
Sbjct: 255 LFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLG 314
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
G EAY + G PD + L N L + +++E+ ++ R P
Sbjct: 315 KAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVV 374
Query: 486 TYSRFVSAL--CRAGRVE-DGYLMRGDLDKVT-ARFSYAKMIMGFIKSNRGDIAARLLVE 541
+Y+ + AL +A E + + D V+ + F+Y+ +I G+ K+NR + A LL E
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 542 MKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD-IFNSFIDGAMHANK 600
M EKG+ P C + S I+ A +
Sbjct: 435 MDEKGF-----------------------------------PPCPAAYCSLINALGKAKR 459
Query: 601 PDLAREVFELMQRNGIMTNASSQI--LVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLY 657
+ A E+F+ ++ N N SS++ +++K + + ++S+A+ FN++++Q Y
Sbjct: 460 YEAANELFKELKEN--FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAY 517
Query: 658 NRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEK 717
N ++ G+ K+ + A L +M + G I + +++ A+ + +
Sbjct: 518 NALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKH 577
Query: 718 AGRRLTSFLGNVLL 731
+G + N LL
Sbjct: 578 SGIKPDGVTYNTLL 591
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/520 (20%), Positives = 215/520 (41%), Gaps = 15/520 (2%)
Query: 113 DGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRD-FRSCSFPHRA 171
D +I ++FF WAG++ F H +T++ + R L ARL ++ +++ R+
Sbjct: 103 DVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP 162
Query: 172 RYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQ 231
LV A AL + + + + Y+ ++ L + + + +
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 232 ICMRG--YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
+C G + +T +I K GR + A + + + + + L+G+ +
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 290 RFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQK-RDSEGFVPCKVR 346
+ E+A++L E + P Y I+GL + GR+DEA F++ RD G P V
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD--GLTPDVVF 340
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL-CFFCKLGMVDVALELFNSR 405
N L+ L + R++++ + +M P +V+ N V+ F V F+
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
+SP+ Y LI C ++A +L G+ P + +L NAL + +
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKM 522
+ +L E +S Y+ + + G++ + + ++ + ++Y +
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG- 581
+ G +K+ + A LL +M+E G +S+ +L+ PR R + E + H
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR-RAIEMFETIKHSG 579
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
KP +N+ + HA + A + M+ G +A
Sbjct: 580 IKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDA 619
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 193/474 (40%), Gaps = 49/474 (10%)
Query: 432 EAYRVLRSSSGTGYFP-DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRF 490
E YR ++ Y S L AL R + + + A R+ P SSTY+
Sbjct: 144 EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 491 VSALCRAGRVEDGYLMRGDL----DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
+ L + G+ E + + ++ D +Y+ +I + K R D A RL EMK+
Sbjct: 204 ILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 547 YELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG--KPHCDIFNSFIDGAMHANKPDLA 604
+ Y +L + + +L E M P + I G A + D A
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVE-KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Query: 605 REVFELMQRNGI----------------------MTNASSQI-------------LVMKS 629
++ M R+G+ +TN S++ V+K+
Sbjct: 323 YGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA 382
Query: 630 YFRSR-RISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
F S+ +S+ +F+ ++ V ++ Y+ +I G CK+++ + AL L EM + G P
Sbjct: 383 LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDL 747
Y L+ L KRY A L ++ ++S + V++ H ++ + VDL
Sbjct: 443 CPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA-VDL 501
Query: 748 RRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH 805
E +G D ++ ++ + L ++ DI ++N+++
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 806 HDMDK-ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+ + A E+F+ + G++P+ TY + F++ G +EA R + EM KGF
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 154/441 (34%), Gaps = 73/441 (16%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN-SLAENNCYNAF 225
FP Y L+ Y G+ D A+ L M+ + Y LL A
Sbjct: 230 FPDTITY-SALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 226 DVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
D+ + T +IK L K GR++EA ++ G L+ L+ +L
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 286 CESNRFERAVELVSEFG--------------------------------------TSLPL 307
+ R E + SE G + P
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPS 408
Query: 308 ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
E Y + I G + R+++AL ++ D +GF PC Y LI L + R + EL
Sbjct: 409 EFTYSILIDGYCKTNRVEKAL-LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 368 MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
++ E + ++ F K G + A++LFN G P+ AY L+ +
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTY 487
G EA +LR G D + + + N R ++ + P+ TY
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 488 SRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
+ + AG E+ AAR++ EMK+KG+
Sbjct: 588 NTLLGCFAHAGMFEE--------------------------------AARMMREMKDKGF 615
Query: 548 ELKRSSYRHVLHCLLHMDNPR 568
E +Y +L + ++D+ +
Sbjct: 616 EYDAITYSSILDAVGNVDHEK 636
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 140/355 (39%), Gaps = 11/355 (3%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
D + + + L+ G AG+ D A M GL D + L+N
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 215 SLAE----NNCYNAFDVIANQICMRGYESHMTNVIVIKHLCK-QGRLEEAEAHLNGLVGS 269
L + N F + C S+ T VIK L + + + E + + +
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT---VIKALFESKAHVSEVSSWFDKMKAD 403
Query: 270 GKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEA 327
S LI C++NR E+A+ L+ E P AY I L + R + A
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAA 463
Query: 328 LEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLC 387
E F++ +++ G V +V Y ++I + +L + +L +M P++ NA++
Sbjct: 464 NELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 388 FFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
K GM++ A L + G + ++ ++ G P+ A + + +G P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
D T++TL +E ++ ++ F ++ TYS + A+ +D
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 125/319 (39%), Gaps = 40/319 (12%)
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG-IMTNASSQILVMKSYFRSRRISDAL 640
KP +NS I M + + EV+ M G + + ++ SY + R A+
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 641 RFFNDIRHQVVVST-KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
R F++++ + T K+Y ++ K K + AL+L EM + G +P++ Y L++ L
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 700 CSLKRYYEAV-------------------NLVNVYEKAGR--RLTSFLGNVLLFHSMISP 738
R EA NL+N+ K GR LT+ + ++ +
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV 373
Query: 739 EVYHSCVDLRREKEGEFLDSS----------------MLTLIIGAFSGCLRVSYSIQELE 782
Y++ + E + + S +++I + RV ++ LE
Sbjct: 374 VSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 783 ELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHG 841
E+ K FP Y L+ L + A ELF + + + Y +M F G
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 842 RKDEAKRWVHEMLKKGFNP 860
+ EA +EM +G P
Sbjct: 494 KLSEAVDLFNEMKNQGSGP 512
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 171/405 (42%), Gaps = 12/405 (2%)
Query: 266 LVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGR 323
+V SG ++ L+ ++ LC E++ +L+ EF P Y I V+ R
Sbjct: 215 MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ-R 273
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
+E + +G V KV Y +L+ ++ ++ D +L +M E I ++
Sbjct: 274 DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333
Query: 384 AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGT 443
+++ + C+ G + A LF+ ++ GLSP+ Y LI +C G A ++
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G + F+TL + CR+ +DE + D ++ F + T + S R R ++
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 504 Y-----LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
+M G + T SY +I + K + A RL VEM KG + +Y ++
Sbjct: 454 KQWLFRMMEGGVKLSTV--SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 559 HCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+ + M +G P + S I G A+ D A +F M G+
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMI 661
N+ + +++ ++ + +A ++++ R + K+Y +I
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 200/476 (42%), Gaps = 23/476 (4%)
Query: 106 VLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSC 165
V R D+G L+ FD+ ++ R+ V L A+ R + L FR
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIV----FLVAAKKRRRIDLCLEIFRRM 215
Query: 166 --SFPHRARYHDTLVV-GYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCY 222
S Y T+VV G G+ + + L+ +G+ + + Y+ ++N+ + +
Sbjct: 216 VDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 223 NAFDVIANQICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFL 281
+ + + + G + +T ++++ K G++ +AE + + G E + L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 282 IGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
I C +RA L ++E G S P YG I G+ + G + A E + S+
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLS-PSSYTYGALIDGVCKVGEMGAA-EILMNEMQSK 393
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G +V +N LI R+ + + + M + ++ T N + F +L D A
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ + G+ + ++Y LI C +G +EA R+ S G P+ T++ + A
Sbjct: 454 KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD-----LDKV 513
C++ KI E L P+S TY+ + C A V++ + + LD+
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 573
Query: 514 TARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
+ +Y MI G K+ + D A L EMK KGY + Y ++ M +P T
Sbjct: 574 SV--TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG---SMHSPET 624
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 13/291 (4%)
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
KP +N+ I+ + V ++M+++G++ N + L+M+ ++ ++SDA +
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 642 FFNDIRHQVVVS-TKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
F+++R + + S +Y +I C+ A L E+ + GL+PS Y L+ +C
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 701 SLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR------EKEGE 754
+ A L+N + G +T ++F+++I VD E++G
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQ-----VVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 755 FLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTY-NLLMRKLTHHDMDKACE 813
D I F+ R + Q L ++ + +Y NL+ ++++A
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 814 LFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
LF M +G++PN TY +M + + G+ EA++ M G +P T
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 171/468 (36%), Gaps = 71/468 (15%)
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
+D+ LE+F G+ + ++ LC G +++ ++++ S G P+ T++T
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVT 514
+ NA ++ + +L + + N TY+ + + G++ D
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD------------ 312
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
A +L EM+E+G E Y ++ N + F
Sbjct: 313 --------------------AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLF 352
Query: 575 LEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
E+ G P + + IDG + A + MQ G+ ++ Y R
Sbjct: 353 DELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 634 RRISDALRFFNDIRHQVVVSTKLYNRMIVGLC--KSDKADIALELCFEMLKVGLNPSIEC 691
+ +A + D+ Q ++ + C + + D A + F M++ G+ S
Sbjct: 413 GMVDEASMIY-DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVS 471
Query: 692 YEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREK 751
Y L+ C EA L G + + NV+ +Y C K
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM---------IYAYC------K 516
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR-KLTHHDMDK 810
+G+ ++ L + A D YTY L+ + ++D+
Sbjct: 517 QGKIKEARKLR-------------------ANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 811 ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
A LF M +GL+ N TY +M G S G+ DEA EM +KG+
Sbjct: 558 AMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 42/285 (14%)
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
+F ++D M VF+ M + G+ + S I+ + + + RRI L F +
Sbjct: 160 VFRVYVDNGMFEE----GLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRM 215
Query: 647 RHQVVVSTKLYNRMIV--GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR 704
V T +Y+ IV GLC+ + + + +L E G+ P Y ++ +
Sbjct: 216 VDSGVKIT-VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRD 274
Query: 705 YYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLI 764
+ ++ V +K G +L+ S+ K G+ D+ L
Sbjct: 275 FSGVEGVLKVMKKDGVVYNKVTYTLLMELSV---------------KNGKMSDAEKL--- 316
Query: 765 IGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMR-KLTHHDMDKACELFDRMCQRGL 823
+E+ + D++ Y L+ +M +A LFD + ++GL
Sbjct: 317 ----------------FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGL 360
Query: 824 EPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
P+ +TYG + G G A+ ++EM KG N + N +
Sbjct: 361 SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 7/263 (2%)
Query: 241 MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE 300
+T ++ LC +GR+ +A A ++ +V G + + + +I LC+ E A+ L+S+
Sbjct: 11 VTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT----IINGLCKMGDTESALNLLSK 66
Query: 301 FGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
+ + Y I L + G A F + D +G P + Y+ +I R
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIFPDVITYSGMIDSFCRSG 125
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
R D +LL DM E I P++VT +A++ K G V A E++ + G+ P + Y
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYN 185
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
+I C +A R+L S + PD TFSTL N C+ ++D ++ R
Sbjct: 186 SMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 245
Query: 479 RFMPNSSTYSRFVSALCRAGRVE 501
+ N+ TY+ + C+ G ++
Sbjct: 246 GIVANTVTYTTLIHGFCQVGDLD 268
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
+ + GL GR+ +AL + + EG P Y +I L + + LL
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVE-EGHQP----YGTIINGLCKMGDTESALNLLSK 66
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M ET I ++V NA++ CK G A LF G+ P+ + Y +I + C G
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
+A ++LR PD TFS L NAL +E K+ E ++ L R P + TY+
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 490 FVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMK 543
+ C+ R+ D M LD + ++ +++ +I G+ K+ R D + EM
Sbjct: 187 MIDGFCKQDRLNDAKRM---LDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 544 EKGYELKRSSYRHVLH 559
+G +Y ++H
Sbjct: 244 RRGIVANTVTYTTLIH 259
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 18/306 (5%)
Query: 176 TLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICM 234
TL+ G G+ AL L+ RM +G Y ++N L + + +A ++++
Sbjct: 15 TLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNLLS----- 65
Query: 235 RGYESHMTNVIVI-----KHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
+ E+H+ +VI LCK G A+ + G S +I C S
Sbjct: 66 KMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSG 125
Query: 290 RFERAVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRY 347
R+ A +L+ + P + I LV+ G++ EA E + G P + Y
Sbjct: 126 RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML-RRGIFPTTITY 184
Query: 348 NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ 407
N +I +++RL D +L M P++VT + ++ +CK VD +E+F +
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
G+ N + Y LI C G A +L +G P+ TF ++ +LC + ++ +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRK 304
Query: 468 MWDLLD 473
+ +L+
Sbjct: 305 AFAILE 310
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 137/317 (43%), Gaps = 9/317 (2%)
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
+ G P+ + + L+ LC +G +A ++ G+ P + T+ N LC+ +
Sbjct: 3 ETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGR---VEDGYLMRGDLDKVTARFSYAKMI 523
+LL E + Y+ + LC+ G ++ + D +Y+ MI
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK- 582
F +S R A +LL +M E+ ++ +++ L+ +M+ G
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P +NS IDG ++ + A+ + + M + + ++ Y +++R+ + +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 643 FNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
F ++ R +V +T Y +I G C+ D A +L M+ G+ P+ ++ ++ LCS
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 702 LKRYYEAVNLVNVYEKA 718
K +A ++ +K+
Sbjct: 299 KKELRKAFAILEDLQKS 315
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 16/301 (5%)
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
TG PD TF+TL N LC E ++ + L+D +E P Y ++ LC+ G E
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 503 GYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
+ +++ + Y +I K A L EM +KG +Y ++
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 560 CLLHMDNPRTRFFNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIM 617
T LL M + + D+ F++ I+ + K A E++ M R GI
Sbjct: 120 SFCR-SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALEL 676
+ ++ + + R++DA R + + + + ++ +I G CK+ + D +E+
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
EM + G+ + Y L+ C + A +L+NV +G N + F SM+
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG-----VAPNYITFQSML 293
Query: 737 S 737
+
Sbjct: 294 A 294
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 647 RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYY 706
R VV T L N GLC + AL L M++ G P Y ++ LC +
Sbjct: 7 RPDVVTFTTLMN----GLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTE 58
Query: 707 EAVNLVNVYEKAGRRLTSFLGNVLLFHSMI------SPEVYHSCVDLRREKEGEFLDSSM 760
A+NL++ E+ T +V++++++I ++ + +G F D
Sbjct: 59 SALNLLSKMEE-----THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMC 819
+ +I +F R + + Q L ++I + D+ T++ L+ L + +A E++ M
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+RG+ P TY M GF R ++AKR + M K +P
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSP 214
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 12/212 (5%)
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
+YN +I LCK A L EM G+ P + Y ++ C R+ +A L+
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR-- 135
Query: 716 EKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL------IIGAFS 769
+ R++ +V+ F ++I+ V V E G+ L + +I F
Sbjct: 136 DMIERQINP---DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 770 GCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRW 828
R++ + + L+ + +K D+ T++ L+ +D E+F M +RG+ N
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 252
Query: 829 TYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
TY + HGF G D A+ ++ M+ G P
Sbjct: 253 TYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 168/395 (42%), Gaps = 24/395 (6%)
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMN-ETCIPPNMVTMNAVLCFFCKLGMV 395
+ G+V + + ++ RL+ N+ K +L++ M E C+ V+ + +L G V
Sbjct: 44 ANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCV----VSEDILLSICRGYGRV 99
Query: 396 DV---ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTF 452
+L +F+ F P+ AY ++ L + A++ ++ G P +
Sbjct: 100 HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASL 159
Query: 453 STLANALCR-ECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL- 510
+ L ALCR + +D + +R P+S TY +S LCR GR+++ + ++
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219
Query: 511 --DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
D +Y +I G S D A R L EMK KG E +Y ++ L D
Sbjct: 220 EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK-DGRS 278
Query: 569 TRFFNLLEMMTH--GKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
+ L EMM +P+ + + I G K A E+ + M G+ +A V
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 627 MKSYFRSRRISDALRFFNDI--------RHQVVVSTKLYNRMIVGLCKSDKADIALELCF 678
+ + + +A F +++ R + K N ++ GLC ++ A L
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYL 397
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVN 713
M G++ +E E LV+ LC + +AV LV+
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVD 432
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 18/255 (7%)
Query: 281 LIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQG-GRLDEALEFFRQKRD 336
++ +L E N+ A + + E G P + V I+ L + G +D L+ F +
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLP-PTVASLNVLIKALCRNDGTVDAGLKIFLE-MP 184
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
G P Y LI L R R+ + +L +M E P +VT +++ C VD
Sbjct: 185 KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A+ G+ PN Y L+ LC DG +A + G P+ T++TL
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLI 304
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
LC+E KI E +LLD + P++ Y + +S C + + A
Sbjct: 305 TGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA-----------AN 353
Query: 517 FSYAKMIMGFIKSNR 531
F +MI+G I NR
Sbjct: 354 F-LDEMILGGITPNR 367
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P YG I GL + GR+DEA + F + + + P V Y LI L + +
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
L +M I PN+ T ++++ CK G A+ELF G PN + Y LI LC
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
+ +EA +L + G PD + + + C K E + LD + PN
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 486 TYS 488
T++
Sbjct: 369 TWN 371
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 16/348 (4%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
VF ++DF C P + Y L + + ++A MR GL ++L+
Sbjct: 108 VFHKMKDF-DCD-PSQKAYVTVLAI-LVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 215 SLAENN-CYNAFDVIANQICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKE 272
+L N+ +A I ++ RG + T +I LC+ GR++EA+ +V
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 273 LHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEF 330
+ LI LC S + A+ + E + N Y + GL + GR +A+E
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
F + G P V Y LI L +E ++++ ELL MN + P+ V+ FC
Sbjct: 285 FEMMM-ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILT-------LCWDGCPKEAYRVLRSSSGT 443
+ A + G++PN + + + T LC + P A+ + S
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLYLSMRSR 402
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFV 491
G + T +L LC++ + + L+D + +P+ T+ +
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 18/293 (6%)
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
DI S G ++P + VF M+ + + + V+ +++ A +F+ +
Sbjct: 87 DILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKN 146
Query: 646 IRHQVVVST-KLYNRMIVGLCKSD-KADIALELCFEMLKVGLNPSIECYEVLVQKLCSLK 703
+R + T N +I LC++D D L++ EM K G +P Y L+ LC
Sbjct: 147 MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFG 206
Query: 704 RYYEAVNL-VNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD--LR--REKEGEFLDS 758
R EA L + EK V+ + S+I+ VD +R E + + ++
Sbjct: 207 RIDEAKKLFTEMVEK------DCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP 260
Query: 759 SMLTLIIGAFSGCLRVSYSIQELE---ELIAKCFPVDIYTYNLLMRKL-THHDMDKACEL 814
++ T G + S+Q +E ++A+ ++ TY L+ L + +A EL
Sbjct: 261 NVFTYS-SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319
Query: 815 FDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNV 867
DRM +GL+P+ YG + GF + EA ++ EM+ G P T N+
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 132/352 (37%), Gaps = 19/352 (5%)
Query: 135 TRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYA-IAGKPDIALHL 193
++ +V + IL L F F ++ R P + L+ G D L +
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 194 LGRMRFQGLDLDGFGYHILLNSLAE----NNCYNAFDVIANQICMRGYESHMTNVIVIKH 249
M +G D D + Y L++ L + F + + C + +T +I
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA---PTVVTYTSLING 236
Query: 250 LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT--SLPL 307
LC ++EA +L + G E + S L+ LC+ R +A+EL P
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296
Query: 308 ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
Y I GL + ++ EA+E + + +G P Y +I ++ ++ L
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELL-DRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL 355
Query: 368 MDMNETCIPPNMVTMN-------AVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+M I PN +T N V+ C A L+ S G+S + L
Sbjct: 356 DEMILGGITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESL 414
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
+ LC G ++A +++ G P + T+ L + + E D L
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 205/491 (41%), Gaps = 78/491 (15%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG 236
L++ YA AG + ++ + ++R GL +LLNSL + + I ++ G
Sbjct: 139 LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLG 198
Query: 237 YES--HMTNVIVIKHLC-KQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
+ H+ NV+V H C K G E+AE L+ + G + LI V C+ +
Sbjct: 199 VVANIHVYNVLV--HACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFE 256
Query: 294 AVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGR 353
A+ + + + + G P V YN I
Sbjct: 257 ALSV----------------------------------QDRMERSGVAPNIVTYNSFIHG 282
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
RE R+++ L ++ + + N VT ++ +C++ +D AL L G SP
Sbjct: 283 FSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPG 341
Query: 414 YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
+ Y ++ LC DG +EA R+L SG PD T +TL NA CKI++M
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY---CKIEDM----- 393
Query: 474 FALERRFMPNSSTYSRFVSAL-CRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRG 532
VSA+ + +E G ++ D+ +SY +I GF K
Sbjct: 394 -----------------VSAVKVKKKMIESG--LKLDM------YSYKALIHGFCKVLEL 428
Query: 533 DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI--FNS 590
+ A L M EKG+ ++Y ++ + N + LLE D+ +
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYN-QNKQDEITKLLEEFEKRGLCADVALYRG 487
Query: 591 FIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQ 649
I + D A+ +FE M++ G++ ++ + +Y+R+ ++++A F+ + +
Sbjct: 488 LIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRR 547
Query: 650 VVVSTKLYNRM 660
++V+ KLY +
Sbjct: 548 LMVNLKLYKSI 558
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 159/390 (40%), Gaps = 52/390 (13%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P A V + LV+ D + F+ K G V YN+L+ + + +
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFK-KMVKLGVVANIHVYNVLVHACSKSGDPEKAEK 224
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
LL +M E + P++ T N ++ +CK M AL + + + G++PN + Y I
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
+G +EA R+ R + T++TL + CR IDE L + R F P
Sbjct: 285 REGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDL-------DKVTARFSYAKMIMGFIKSNRGDIAARL 538
TY+ + LC GR+ + + ++ D +T +I + K A ++
Sbjct: 344 TYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN----TLINAYCKIEDMVSAVKV 399
Query: 539 LVEMKEKGYELKRSSYRHVLH--C-LLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGA 595
+M E G +L SY+ ++H C +L ++N + F+++E P ++ +DG
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIE--KGFSPGYATYSWLVDGF 457
Query: 596 MHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTK 655
+ NK D ++ E ++ G+ + +
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVA---------------------------------- 483
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGL 685
LY +I +CK ++ D A L M K GL
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 135/339 (39%), Gaps = 36/339 (10%)
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
++ +K D ++ +M + G Y ++H +P L EM G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 582 K-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
P +N+ I + A V + M+R+G+ N + + + R R+ +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 641 RFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
R F +I+ V + Y +I G C+ + D AL L M G +P + Y +++KLC
Sbjct: 294 RLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLC 353
Query: 701 SLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSM 760
R EA L+ E +G++ I P D+
Sbjct: 354 EDGRIREANRLLT--EMSGKK--------------IEP------------------DNIT 379
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMC 819
+I A+ + +++ +++I +D+Y+Y L+ +++ A E M
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
++G P TY + GF N ++DE + + E K+G
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 148/364 (40%), Gaps = 36/364 (9%)
Query: 150 RLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGY 209
RL V+ + ++ LV + +G P+ A LL M +G+ D F Y
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241
Query: 210 HILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGS 269
+ L++ + + + + L Q R+E + N + +
Sbjct: 242 NTLISVYCKKSMH------------------------FEALSVQDRMERSGVAPNIVTYN 277
Query: 270 GKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLEN-AYGVWIRGLVQGGRLDEAL 328
SF+ G R A L E + + Y I G + +DEAL
Sbjct: 278 ---------SFIHG-FSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
R+ +S GF P V YN ++ +L + R+++ LL +M+ I P+ +T N ++
Sbjct: 328 R-LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
+CK+ + A+++ + GL + +YK LI C + A L S G+ P
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPG 446
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRG 508
T+S L + + K DE+ LL+ +R + + Y + +C+ +V+ ++
Sbjct: 447 YATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 509 DLDK 512
++K
Sbjct: 507 SMEK 510
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 122/296 (41%), Gaps = 47/296 (15%)
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLC 665
VFE ++ G+ + + +++ S + R + F ++ VV + +YN ++
Sbjct: 155 VFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACS 214
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
KS + A +L EM + G+ P I Y L+ C ++EA+++ + E++G
Sbjct: 215 KSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG-----V 269
Query: 726 LGNVLLFHSMI-----SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE 780
N++ ++S I + + R K+ + T +I + + +++
Sbjct: 270 APNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRL 329
Query: 781 LEELIAKCFPVDIYTYNLLMRKLTH----------------------------------- 805
E + ++ F + TYN ++RKL
Sbjct: 330 REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 806 -HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
DM A ++ +M + GL+ + ++Y + HGF + AK + M++KGF+P
Sbjct: 390 IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 145/662 (21%), Positives = 254/662 (38%), Gaps = 96/662 (14%)
Query: 101 TFVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVF 156
T VL+ LR D L+FFDW + F H +F + L AR R +F
Sbjct: 69 TTVLQTLRLIKVPAD---GLRFFDWVSNKG-FSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 157 DFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGL-------------- 202
R C + RY ++L+ Y AG ++ L M+ G+
Sbjct: 125 SIERRSNGC-VKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 203 ----------DL------------DGFGYHILLNSLAENNCYN-AFDVIANQICMRGYES 239
DL D + ++ L+N +N+ + AF + +
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD 243
Query: 240 HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVEL 297
+T +I LC+ G+++ A L+G++ ++H + +S+ L+ C + AV +
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 298 VSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDS-EGFVPCKVRYNILIGRL 354
+ + NA Y I+GL + R DE + D+ F P +NILI
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL---- 410
L ++ +M + P+ + + ++ C D A LFN + +
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 411 ---SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
P AY + LC +G K+A +V R G D ++ TL CRE K
Sbjct: 424 DECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKP 482
Query: 468 MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFI 527
++LL L R F+P+ TY + L + G L+ D + R SY + F
Sbjct: 483 AYELLVLMLRREFVPDLETYELLIDGLLKIGEA----LLAHDTLQRMLRSSYLPVATTF- 537
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDI 587
+ A EL + + + CL+ + +LE + + D+
Sbjct: 538 ----HSVLA-----------ELAKRKFANESFCLVTL---------MLEKRI--RQNIDL 571
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDA--LRFFND 645
+ + + + A + L+ NG + ++ +R++ DA L F
Sbjct: 572 STQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLFCL 628
Query: 646 IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
+ Q +V N +I GLCK + A L E++++G + + C+ VL L + ++
Sbjct: 629 EKSQ-MVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKW 687
Query: 706 YE 707
E
Sbjct: 688 EE 689
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 196/450 (43%), Gaps = 27/450 (6%)
Query: 308 ENAYGVWIRGLVQGGRLDEALEF-FRQKRDSEGFVPCKVRY-NILIGRLLRENRLKDVYE 365
E ++ + + L + L+ A F F +R S G V + RY N LI ++ +
Sbjct: 100 EQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVK 159
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS-RSQFGLSPNYMAYKYLILTL 424
L M + I P+++T N++L K G +A +LF+ R +G++P+ + LI
Sbjct: 160 LFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGF 219
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR--FMP 482
C + EA+R+ + PD T++T+ + LCR K+ ++L L++ P
Sbjct: 220 CKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHP 279
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLL 539
N +Y+ V C +++ L+ D+ + +Y +I G +++R D +L
Sbjct: 280 NVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL 339
Query: 540 VEMKE--KGYELKRSSYRHVL--HC-LLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDG 594
+ + + ++ ++ HC H+D F +L M H P ++ I
Sbjct: 340 IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH--PDSASYSVLIRT 397
Query: 595 AMHANKPDLAREVF-ELMQRNGIMTNASSQILV-----MKSYF-RSRRISDALRFFNDIR 647
N+ D A +F EL ++ ++ + L M Y + + A + F +
Sbjct: 398 LCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLM 457
Query: 648 HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYE 707
+ V Y +I G C+ K A EL ML+ P +E YE+L+ L + E
Sbjct: 458 KRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIG---E 514
Query: 708 AVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
A+ + ++ R +S+L FHS+++
Sbjct: 515 ALLAHDTLQRMLR--SSYLPVATTFHSVLA 542
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 196/501 (39%), Gaps = 87/501 (17%)
Query: 281 LIGVLCESNRFERAVELVSE----FGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
L+ +L + R A +L E +G + P + I G + +DEA F+ D
Sbjct: 179 LLSILLKRGRTGMAHDLFDEMRRTYGVT-PDSYTFNTLINGFCKNSMVDEAFRIFK---D 234
Query: 337 SEGF--VPCKVRYNILIGRLLRENRLKDVYELLMDM--NETCIPPNMVTMNAVLCFFCKL 392
E + P V YN +I L R ++K + +L M T + PN+V+ ++ +C
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294
Query: 393 GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG--TGYFPDRR 450
+D A+ +F+ GL PN + Y LI L E +L + T + PD
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
TF+ L A C +D + L + P+S++YS + LC MR +
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC----------MRNEF 404
Query: 511 DKVTARF--------------------SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELK 550
D+ F +Y M + + A ++ ++ ++G +
Sbjct: 405 DRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-D 463
Query: 551 RSSYRHVL--HCLLHMDNPRTRFFNLLEMMTHGK--PHCDIFNSFIDGAMHANKPDLARE 606
SY+ ++ HC P + LL +M + P + + IDG + + LA +
Sbjct: 464 PPSYKTLITGHCREGKFKPA---YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDA-----LRFFNDIRHQVVVSTKLYNRMI 661
+ M R+ + A++ V+ + + +++ L IR + +ST++ R++
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV-RLL 579
Query: 662 VGLCKSDKADIALELCFE-----------------------------MLKVGLNPSIECY 692
+ +KA + + L ++ L+ I+
Sbjct: 580 FSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTC 639
Query: 693 EVLVQKLCSLKRYYEAVNLVN 713
+++ LC KR+ EA +L N
Sbjct: 640 NTVIEGLCKHKRHSEAFSLYN 660
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 152/379 (40%), Gaps = 58/379 (15%)
Query: 115 DILSCLKFFDWAGRQPRFYHTRTTF------------------VAIFRILSCARLRPLVF 156
D + L F DW R P F H T++ + I I SC +R +F
Sbjct: 39 DPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALF 98
Query: 157 --DFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRM-RFQGLDLDGFGYHILL 213
DF R R D+ + Y + P +LL + RF ++ Y +L
Sbjct: 99 VVDFCRTMRK---------GDSFEIKYKLT--PKCYNNLLSSLARFGLVEEMKRLYTEML 147
Query: 214 NSLAENNCYNAFDVIANQICMRGY-----------------ESHMTNVIVIKHLCKQGRL 256
L + Y F+ + N C GY + T I C++ +
Sbjct: 148 EDLVSPDIY-TFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV 206
Query: 257 EEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVELVSEF--GTSLPLENAYG 312
+ A + +G HR+E+S+ LI L E+ + + A+ L+ + P Y
Sbjct: 207 DAAFKVFKEMTQNG--CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 313 VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNE 372
V I L G+ EA+ F+Q +S G P Y +LI + L + LL M E
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSES-GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 373 TCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKE 432
+ PN++T NA++ FCK V A+ L + + L P+ + Y LI C G
Sbjct: 324 NGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDS 382
Query: 433 AYRVLRSSSGTGYFPDRRT 451
AYR+L +G P++RT
Sbjct: 383 AYRLLSLMEESGLVPNQRT 401
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 7/278 (2%)
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN L+ L R ++++ L +M E + P++ T N ++ +CKLG V A +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
Q G P+Y Y I C A++V + + G + +++ L L KID
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS---YAKMI 523
E LL + PN TY+ + ALC +G+ + + + + + Y +I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH--CLLHMDNPRTRFFNLLEMMTHG 581
F + D A+ LL M E G +Y ++ C ++ +LE +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQ--NL 360
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
P +N+ I G + D A + LM+ +G++ N
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 10/288 (3%)
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
++ L+P Y L+ +L G +E R+ PD TF+TL N C+ +
Sbjct: 115 KYKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMI 523
E + + ++ P+ TY+ F++ CR V+ + + ++ + SY ++I
Sbjct: 173 EAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLI 232
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-- 581
G ++ + D A LLV+MK+ +Y ++ L ++ NL + M+
Sbjct: 233 YGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG-SGQKSEAMNLFKQMSESGI 291
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
KP ++ I + D A + E M NG+M N + ++K + + + + A+
Sbjct: 292 KPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMG 350
Query: 642 FFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ + Q +V + YN +I G C S D A L M + GL P+
Sbjct: 351 LLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 131/328 (39%), Gaps = 46/328 (14%)
Query: 544 EKGYELKRSSYRHVLHCLLH---MDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANK 600
E Y+L Y ++L L ++ + + +LE + P FN+ ++G
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLV--SPDIYTFNTLVNGYCKLGY 170
Query: 601 PDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR----HQVVVSTKL 656
A++ + + G + + + + R + + A + F ++ H+ VS
Sbjct: 171 VVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS--- 227
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
Y ++I GL ++ K D AL L +M P++ Y VL+ LC + EA+NL
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSY 776
++G I P D M T++I +F +
Sbjct: 288 ESG----------------IKP------------------DDCMYTVLIQSFCSGDTLDE 313
Query: 777 SIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHG 836
+ LE ++ ++ TYN L++ ++ KA L +M ++ L P+ TY + G
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Query: 837 FSNHGRKDEAKRWVHEMLKKGFNPPENT 864
+ G D A R + M + G P + T
Sbjct: 374 QCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 227/534 (42%), Gaps = 30/534 (5%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
+Y + +++ GR A +F K SEG P + YN+++ RL+ D
Sbjct: 222 SYNSLFKVILRRGRYMMAKRYF-NKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFED 280
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M I P+ T N ++ FC+ +D A +LF + P+ ++Y +I
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP-NSSTYS 488
+ R+ +G P+ T+STL LC K+ E ++L + + P ++S +
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 489 RFVSALCRAGRVEDGYLM---RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEK 545
+ + + +AG + + L+ Y +I K++ + A +LL + EK
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 546 --------GYELKRSSYRHVLHCLLHMDNPRTRFFNLL--EMMTHGKPHCDIFNSFIDGA 595
E++ S+Y ++ L +N +T +L ++M G D N+ I G
Sbjct: 461 EIILRHQDTLEMEPSAYNPIIEYLC--NNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGH 518
Query: 596 MHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVST 654
PD + E+ ++M R G+ +++ L++KSY DA + + V +
Sbjct: 519 AKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDS 578
Query: 655 KLYNRMIVGLCKSDKADIALELCFEML--KVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
L+ +I L + + A + M+ VG+ +++ +++ L EA+ +
Sbjct: 579 SLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRI 638
Query: 713 NVYEKAGRRLTSFLGNVLLFHSMISPEVYH-SCVD--LRREKEGEFLD-SSMLTLIIGAF 768
++ + G T+ L ++L S + +D L R+ EF +L ++GA
Sbjct: 639 DLLNQNGH--TADLDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGA- 695
Query: 769 SGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMDKACELFDRMCQRG 822
G +YS+ L +++ K D + + L++ L K ++ RM ++G
Sbjct: 696 -GKTLNAYSV--LCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADVLSRMIKKG 746
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 146/347 (42%), Gaps = 48/347 (13%)
Query: 535 AARLLVEMKEKGYELKRSSYRHVLHCLLHMDN--PRTRFFNLLEMMTHG-KPHCDIFNSF 591
+ ++ +MK+ G E SY + +L R+FN +M++ G +P +N
Sbjct: 204 SVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFN--KMVSEGVEPTRHTYNLM 261
Query: 592 IDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR-HQV 650
+ G + + + A FE M+ GI + ++ ++ + R +++ +A + F +++ +++
Sbjct: 262 LWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKI 321
Query: 651 VVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVN 710
S Y MI G D+ D L + EM G+ P+ Y L+ LC + EA N
Sbjct: 322 GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Query: 711 LVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSG 770
+ L N++ H I+P+ D+S+ ++ + S
Sbjct: 382 I--------------LKNMMAKH--IAPK-----------------DNSIFLKLLVSQSK 408
Query: 771 CLRVSYSIQELEELIAKCFPVDIYTYNLLMR-KLTHHDMDKACELFDRMCQR-------- 821
++ + + L+ + P + Y +L+ + ++A +L D + ++
Sbjct: 409 AGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQD 468
Query: 822 GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
LE Y + N+G+ +A+ +++K+G + N+I
Sbjct: 469 TLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLI 515
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 182/440 (41%), Gaps = 22/440 (5%)
Query: 292 ERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
E+ ++ ++ G P Y ++I L + +++EA + F + G +P Y+ +I
Sbjct: 219 EKLLDEMTSLGIK-PNVYIYTIYILDLCRDNKMEEAEKMFELMK-KHGVLPNLYTYSAMI 276
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ ++ Y L ++ + PN+V ++ FCK + A LF +FG+
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
PN Y LI C G EA +L PD T++ L N LC E ++ E L
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIK 528
R P+S+TY+ + C+ +E + ++ +++ +I G+
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 529 SNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR---FFNLLEMMTHGKPHC 585
A L EM KG +Y ++ N + + ++LE H H
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH- 515
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
F +DG + +A + ++ + N +++ ++ I A RFF+D
Sbjct: 516 -TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574
Query: 646 IRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR 704
+R + Y M+ G + + + L +M+K G+ P++ LV +L L R
Sbjct: 575 MRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL-----LVNQL--LAR 627
Query: 705 YYEAVNLVNVYEKAGRRLTS 724
+Y+A N Y K+ LT+
Sbjct: 628 FYQA----NGYVKSACFLTN 643
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 174/474 (36%), Gaps = 47/474 (9%)
Query: 197 MRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGR 255
M +GL D Y +L + Y+ + + +++ G + ++ I I LC+ +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 256 LEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWI 315
+EEA E+ EL+ + G LP Y I
Sbjct: 250 MEEA--------------------------------EKMFELMKKHGV-LPNLYTYSAMI 276
Query: 316 RGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
G + G + +A +++ +E +P V + L+ + L L + M + +
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAE-LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYR 435
PN+ N ++ CK G + A+ L + LSP+ Y LI LC + EA R
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 436 VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
+ + FP T+++L + C+E +++ DL PN T+S + C
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 496 RAGRVEDG---YLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
++ Y V +Y +I K A RL +M E G
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH---- 511
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFN-----SFIDGAMHANKPDLAREV 607
H CL+ R ++ +N I+G A
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMI 661
F M+ GI + S + ++K + + +RI+D + D+ ++ L N+++
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 576 EMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
EM + G KP+ I+ +I NK + A ++FELM+++G++ N + ++ Y ++
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 635 RISDALRFFNDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
+ A + +I +++ + ++ ++ G CK+ + A L M+K G++P++ Y
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREK-E 752
L+ C EAV L++ E F +L+ I +V + ++ K E
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 753 GEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKA 811
F S+ +I + + ++ E+ A +I T++ L+ + D+ A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
L+ M +G+ P+ TY + EA R +ML+ G +P ++T
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 146/379 (38%), Gaps = 49/379 (12%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV---YEL 366
+ + I ++ G +EAL R+ + S C +IL G L+R R V Y+L
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREMKCSPDSKAC---LSILNG-LVRRRRFDSVWVDYQL 189
Query: 367 LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCW 426
++ + +P + C F K G+ +L + + G+ PN Y IL LC
Sbjct: 190 MI--SRGLVPDVHIYFVLFQCCF-KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
D +EA ++ G P+ T+S + + C+ + + + L L +PN
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 487 YSRFVSALCRA------------------------------GRVEDGYLMRG-------- 508
+ V C+A G + G ++
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 509 DLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR 568
L+ F+Y +I G ++ A RL +MK + ++Y ++H N
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 569 TRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVM 627
EM G +P+ F++ IDG + A ++ M GI+ + + ++
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 628 KSYFRSRRISDALRFFNDI 646
++F+ + +ALR ++D+
Sbjct: 487 DAHFKEANMKEALRLYSDM 505
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 118/311 (37%), Gaps = 35/311 (11%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLA-ENNCYNAFDVIANQI 232
++ L+ G+ +G A+ LL M L D F Y IL+N L E+ A +
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
R + S T +I CK+ +E+A + + SG E + S LI C +
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
A+ L E +G VP V Y LI
Sbjct: 462 AAMGLYFEMTI----------------------------------KGIVPDVVTYTALID 487
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
+E +K+ L DM E I PN T ++ F K G + VA++ + +Q
Sbjct: 488 AHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW 547
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
N++ + LI LC +G A R G PD ++ ++ +E +I + L
Sbjct: 548 NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQ 607
Query: 473 DFALERRFMPN 483
++ +PN
Sbjct: 608 CDMIKTGILPN 618
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 152/351 (43%), Gaps = 12/351 (3%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G +P + YN LI R + + Y + M E I P++ T N+++ K M++
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG-TGYFPDRRTFSTLAN 457
L+LF+ GLSP+ +Y L+ G EA+++L G P T++ L +
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VT 514
ALC+ D +L L+ R P TY+ ++ LC++ RV M +L K
Sbjct: 163 ALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+Y M+ + K+ R + +L ++MK++GY + V+ L+ + +
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 575 LEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
E++ G DI +N+ ++ D ++ E ++ G+ + + +++
Sbjct: 282 HELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLN 341
Query: 633 SRRISDA---LRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEM 680
A L ++ Q V T N +I GLCK+ D A+ L M
Sbjct: 342 IGNTGGAEKHLACIGEMGMQPSVVT--CNCLIDGLCKAGHVDRAMRLFASM 390
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 163/394 (41%), Gaps = 16/394 (4%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++TL+ GY D A + RMR G++ D Y+ L++ A+N N + +++
Sbjct: 51 YNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEML 110
Query: 234 MRGYESHMTNV-IVIKHLCKQGRLEEA------EAHLNGLVGSGKELHRSELSFLIGVLC 286
G M + ++ K GR EA + HL GLV G + + + L+ LC
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLV-PGIDTY----NILLDALC 165
Query: 287 ESNRFERAVELVSEFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKV 345
+S + A+EL + + P Y + I GL + R+ R+ + S G+ P V
Sbjct: 166 KSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKS-GYTPNAV 224
Query: 346 RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
Y ++ + R++ +L + M + + AV+ K G + A E +
Sbjct: 225 TYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL 284
Query: 406 SQFGL-SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ G S + ++Y L+ DG +L G PD T + + N L
Sbjct: 285 VRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIM 524
L E P+ T + + LC+AG V+ + ++ V F+Y ++
Sbjct: 345 TGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME-VRDEFTYTSVVH 403
Query: 525 GFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
K R A++LL+ KG ++ S+ R VL
Sbjct: 404 NLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVL 437
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 134/297 (45%), Gaps = 16/297 (5%)
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR 641
+P +NS I GA + ++F+ M +G+ + S +M YF+ R +A +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 642 FFNDIRH--QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
++ H +V YN ++ LCKS D A+EL F+ LK + P + Y +L+ L
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL-FKHLKSRVKPELMTYNILINGL 198
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD------LRREKEG 753
C +R ++ +K+G + N + + +M+ ++ L+ +KEG
Sbjct: 199 CKSRRVGSVDWMMRELKKSG-----YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 754 EFLDSSMLTLIIGAFSGCLRVSYSIQELEELI-AKCFPVDIYTYNLLMR-KLTHHDMDKA 811
D ++ A R + + + EL+ + DI +YN L+ ++D
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+L + + +GL+P+ +T+ ++ +G N G A++ + + + G P T N +
Sbjct: 314 DDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/486 (22%), Positives = 203/486 (41%), Gaps = 55/486 (11%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRD 161
++RVL GD G++ +FF WA +QP ++H+ ++ ILS R V+ + +
Sbjct: 99 LIIRVLSRCGDAGNL--GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEE 156
Query: 162 FRSCSFPH--RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN 219
R + P L+ +A A A+ +L M GL+ D + + LL++L +N
Sbjct: 157 MRKTN-PELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKN 215
Query: 220 N------------------------------CYNAFDVIANQICMRGYESHM-TNVIVIK 248
C + A ++ ++ E+ + +++V
Sbjct: 216 GSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFT 275
Query: 249 HL----CKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCES-NRFERAVELVSE--- 300
+L G++ +A +N + G E + + + LI LC + R + A+ + E
Sbjct: 276 NLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
Query: 301 FGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
+G + Y I G + G +D+ R +G +P +V Y ++ ++ +
Sbjct: 336 YGCEADI-VTYTALISGFCKWGMIDKGYSVLDDMR-KKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
++ EL+ M P+++ N V+ CKLG V A+ L+N GLSP + +
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYF--PDRRTFSTLANALCRECKID---EMWDLLDFA 475
I G EA + G F P T +L N L R+ K++ ++W +
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNK 513
Query: 476 LERRFMPNSSTYSRFVSALCRAGRVEDG---YLMRGDLDKVTARFSYAKMIMGFIKSNRG 532
+ N S ++ ++ AL G V++ L ++D + +YAK++ G K
Sbjct: 514 TSSCEL-NVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNR 572
Query: 533 DIAARL 538
IAA +
Sbjct: 573 TIAAEI 578
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 180/434 (41%), Gaps = 39/434 (8%)
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS-RSQ 407
+L+ R N +K E+L +M + + P+ +L CK G V A ++F R +
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 231
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
F PN + L+ C +G EA VL G PD F+ L + K+ +
Sbjct: 232 F--PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 289
Query: 468 MWDLLDFALERRFMPNSSTYSRFVSALCRA-GRVEDGYLMRGDLDKVTAR---FSYAKMI 523
+DL++ +R F PN + Y+ + ALCR R+++ + ++++ +Y +I
Sbjct: 290 AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 349
Query: 524 MGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK- 582
GF K D +L +M++KG + +Y ++ + H + +F LE++ K
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIM--VAH--EKKEQFEECLELIEKMKR 405
Query: 583 ----PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISD 638
P I+N I A + A ++ M+ NG+ + ++++ + + +
Sbjct: 406 RGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE 465
Query: 639 ALRFFNDIRHQVVVSTKLY---NRMIVGLCKSDKADIALEL--CFEMLKVGLNPSIECYE 693
A F ++ + + S Y ++ L + DK ++A ++ C ++ +
Sbjct: 466 ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWT 525
Query: 694 VLVQKLCSLKRYYEAVNLV------------NVYEKAGRRLTSFLGNVLLFHSMISPEVY 741
+ + L + EA + N Y K + L L++ I+ E+
Sbjct: 526 IWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNK------LYNRTIAAEIT 579
Query: 742 HSCVDLRREKEGEF 755
V + E+E F
Sbjct: 580 EKVVKMASEREMSF 593
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 139/346 (40%), Gaps = 48/346 (13%)
Query: 526 FIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHC 585
F +N A +L EM + G E + +L L + + +M P+
Sbjct: 177 FASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNL 236
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
F S + G K A+EV M+ G+ + ++ Y + +++DA ND
Sbjct: 237 RYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMND 296
Query: 646 IRHQ-VVVSTKLYNRMIVGLCKSDK-ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLK 703
+R + + Y +I LC+++K D A+ + EM + G I Y L+ C
Sbjct: 297 MRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWG 356
Query: 704 RYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL 763
+ ++++ K G ++ +V + + + EK+ +F
Sbjct: 357 MIDKGYSVLDDMRKKG---------------VMPSQVTYMQIMVAHEKKEQF-------- 393
Query: 764 IIGAFSGCLRVSYSIQELEELIAK-----CFPVDIYTYNLLMR-KLTHHDMDKACELFDR 817
+E ELI K C P D+ YN+++R ++ +A L++
Sbjct: 394 ---------------EECLELIEKMKRRGCHP-DLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 818 MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKG-FNPPE 862
M GL P T+ +M +GF++ G EA EM+ +G F+ P+
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 24/308 (7%)
Query: 572 FNLLEMMTHGKPHC---DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
+ L+E M P ++F + AN A EV + M + G+ + ++
Sbjct: 151 WGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLD 210
Query: 629 SYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ ++ + +A + F D+R + + + + ++ G C+ K A E+ +M + GL P
Sbjct: 211 ALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPD 270
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISP---------E 739
I + L+ + +A +L+N K G F NV + +I E
Sbjct: 271 IVVFTNLLSGYAHAGKMADAYDLMNDMRKRG-----FEPNVNCYTVLIQALCRTEKRMDE 325
Query: 740 VYHSCVDLRREKEGEFLDSSMLTLIIGAFS--GCLRVSYSIQELEELIAK-CFPVDIYTY 796
V++ E+ G D T +I F G + YS+ L+++ K P +
Sbjct: 326 AMRVFVEM--ERYGCEADIVTYTALISGFCKWGMIDKGYSV--LDDMRKKGVMPSQVTYM 381
Query: 797 NLLMRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
+++ ++ EL ++M +RG P+ Y ++ G EA R +EM
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 857 GFNPPENT 864
G +P +T
Sbjct: 442 GLSPGVDT 449
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/442 (19%), Positives = 184/442 (41%), Gaps = 47/442 (10%)
Query: 318 LVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
L++ GR EA F+ ++ G P + Y L+ + + + + ++ ++ ++
Sbjct: 55 LIERGRPHEAQTVFKTLAET-GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKL 113
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
+ + NAV+ F + G ++ A++ + GL+P Y LI G P+ + +L
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 438 R---SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
P+ RTF+ L A C++ K++E W+++ E P++ TY+ A
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--AT 231
Query: 495 CRAGRVEDGYLMRGDLDKVTARFSYAK----------MIMGFIKSNRGDIAARLLVEMKE 544
C V+ G +R + + V K ++ G+ + R R + MKE
Sbjct: 232 CY---VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 545 KGYE----------------LKRSSYRHVLHCLLHMD---------NPRTRFFNLLEMMT 579
E + R V LL M N + + +L +M
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKV-QVLTLMK 347
Query: 580 HGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRIS 637
D+ +++ ++ A + A +VF+ M + G+ +A + ++ K Y R++
Sbjct: 348 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPK 407
Query: 638 DALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
A + + + ++ +I G C + D A+ + +M K G++P+I+ +E L+
Sbjct: 408 KAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467
Query: 698 KLCSLKRYYEAVNLVNVYEKAG 719
+K+ ++A ++ + G
Sbjct: 468 GYLEVKQPWKAEEVLQMMRGCG 489
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 156/385 (40%), Gaps = 24/385 (6%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
+L FFR + + P V NIL G LL +K L + T P + +
Sbjct: 96 SLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFL---DTTGFKPEPTLLEQYV 152
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPK----EAYRVLRSSSG 442
+ G+V+ A+E++N G+S + + ++L GC K + + L
Sbjct: 153 KCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLL-----GCLKARKLDRFWELHKEMV 207
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR--- 499
F R L ALC + E ++LL L++ P Y++ +S C G
Sbjct: 208 ESEFDSER-IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYAC 266
Query: 500 VEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
+ + + + + Y K+I G + + A + +K+KGY R Y ++
Sbjct: 267 MSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIR 326
Query: 560 CLLH---MDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
+ + R +F EM+ G +P+ +N I G + L + M RNG
Sbjct: 327 GFCEKGWLGSARKLWF---EMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNG 383
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIAL 674
S ++K + + +A F ++ V + YN +I G CK +K + L
Sbjct: 384 YGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGL 443
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKL 699
+L E+ +GL PS Y LV+ L
Sbjct: 444 KLYKELKALGLKPSGMAYAALVRNL 468
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 99/244 (40%), Gaps = 4/244 (1%)
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAF-DVIANQICMRGYESHMT 242
G LL + QGLD + Y L++ E Y +V+ I + S
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYI 285
Query: 243 NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFG 302
+IK LC + EA L G R + +I CE A +L E
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 303 TS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
P E AY V I G + G + +E F + G+ + N +I +
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEIS-LVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+ +E+ +M+ET + PN +T NA++ FCK V+ L+L+ GL P+ MAY L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 421 ILTL 424
+ L
Sbjct: 465 VRNL 468
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 100/251 (39%), Gaps = 3/251 (1%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF--GT 303
+I+ LC G + E L + G + + + LI CE + E++
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P Y I+GL + EA F+ +D +G+ P +V Y +I + L
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKD-KGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L +M + + PN N ++ K G + + +N + G ++ +I
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
C G EA+ + ++ S TG P+ T++ L C+E K+++ L P+
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 484 SSTYSRFVSAL 494
Y+ V L
Sbjct: 458 GMAYAALVRNL 468
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 116/293 (39%), Gaps = 30/293 (10%)
Query: 282 IGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
+ L E E A+E+ + + G S + V + G ++ +LD E ++ +SE
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLL-GCLKARKLDRFWELHKEMVESE 210
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
F ++R LI L + + YELL + + P ++ FC++G
Sbjct: 211 -FDSERIR--CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACM 267
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
E+ ++ + P+ Y+ +I LC + EAY + ++ GY PDR ++T+
Sbjct: 268 SEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG 327
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARF- 517
C + + L +++ PN Y+ + G+ RG++ V A +
Sbjct: 328 FCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMI----------HGHFKRGEISLVEAFYN 377
Query: 518 ------------SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
S MI GF + D A + M E G +Y ++
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALI 430
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 146/324 (45%), Gaps = 11/324 (3%)
Query: 185 GKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYN-AFDVIANQICMRGYESHMTN 243
GK D A+ L M +GL L+ GY+ L+ LA+ + A V + + + T
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVG-SGKELHRSELSFLIGVLCESNRFERAVELVSEFG 302
+++ L +G+L L+G+V S + + + S+L+ L + A L +
Sbjct: 344 SLLLNLLVAEGQL----VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMW 399
Query: 303 TSLPLE---NAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
S P++ ++Y + L G+ EA+E K +G V + YN + L + +
Sbjct: 400 -SFPVKGERDSYMSMLESLCGAGKTIEAIEML-SKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
+ +++L M + P++ T N ++ F ++G VD A+ +F + P+ ++Y
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNS 517
Query: 420 LILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
LI L +G EA+ + G PD T+STL + +++ + L + L +
Sbjct: 518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG 577
Query: 480 FMPNSSTYSRFVSALCRAGRVEDG 503
PN TY+ + L + GR +
Sbjct: 578 CQPNIVTYNILLDCLEKNGRTAEA 601
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/440 (21%), Positives = 182/440 (41%), Gaps = 53/440 (12%)
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLA--ENNCYNAFDVIANQICMRGYESHMTNVIVI 247
A + +R G LD F Y++LL++LA E C F+ + + C R T I+I
Sbjct: 222 AFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKAC-QVFEDMKKRHCRR---DEYTYTIMI 277
Query: 248 KHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPL 307
+ + + G+ +EA N ++ G L+ ++G
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLN------VVG------------------------ 307
Query: 308 ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN---RLKDVY 364
Y ++ L +G +D+A++ F + ++ G P + Y++L+ L+ E RL V
Sbjct: 308 ---YNTLMQVLAKGKMVDKAIQVFSRMVET-GCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
E+ I +V KLG V A LF F + +Y ++ +L
Sbjct: 364 EISKRYMTQGIYSYLVRT------LSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
C G EA +L G D ++T+ +AL + +I + DL + + P+
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 485 STYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVE 541
TY+ +++ R G V++ + +L++ + SY +I K+ D A E
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
Query: 542 MKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANK 600
M+EKG +Y ++ C + + EM+ G +P+ +N +D +
Sbjct: 538 MQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGR 597
Query: 601 PDLAREVFELMQRNGIMTNA 620
A +++ M++ G+ ++
Sbjct: 598 TAEAVDLYSKMKQQGLTPDS 617
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 112/534 (20%), Positives = 219/534 (41%), Gaps = 58/534 (10%)
Query: 347 YNILIGRLLREN---RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
YN +I L R N R V +L M ++ + N+ T+N ++ FF + + L L
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVK 195
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
++ L N YK L+ +A+ V G+ D ++ L +AL ++
Sbjct: 196 ---KWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE 252
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--DKVTARF-SYA 520
K ++++ + RR + TY+ + + R G+ ++ + ++ + +T Y
Sbjct: 253 KACQVFEDMKKRHCRR---DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYN 309
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEM--- 577
++ K D A ++ M E G +Y +L+ LL + R ++E+
Sbjct: 310 TLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN-LLVAEGQLVRLDGVVEISKR 368
Query: 578 -MTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
MT G I++ + A +F M + S + +++S + +
Sbjct: 369 YMTQG-----IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 637 SDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVL 695
+A+ + I + VV T +YN + L K + +L +M K G +P I Y +L
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 696 VQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEF 755
+ S R E +N++E+ R + +++ ++S+I+ C+ K G+
Sbjct: 484 I---ASFGRVGEVDEAINIFEELER--SDCKPDIISYNSLIN------CLG----KNGDV 528
Query: 756 LDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACEL 814
++ + +E+ K D+ TY+ LM + ++ A L
Sbjct: 529 DEAHV-------------------RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSL 569
Query: 815 FDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
F+ M +G +PN TY ++ +GR EA +M ++G P T V+
Sbjct: 570 FEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 9/391 (2%)
Query: 120 LKFFDWAGR-QPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRA--RYHDT 176
L+ F +AG+ P F H T+ +I LS AR V + D R+ P +
Sbjct: 66 LQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFID 125
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVI-ANQICMR 235
L+ Y +AG+ + ++ + R+ G+ + LLN L +N ++ + N
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 236 GYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G ++ T +++K LCK+ +E A L+ + G + + ++G E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 295 VELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
++ E P Y V + G + GR EA +E P +V Y ++I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE-IEPNEVTYGVMIR 304
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
L +E + + + +M E P+ V+ C+ VD A L+ + P
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP 364
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL 472
+ LI LC +G EA R L G P T++TL +C + ++ E L
Sbjct: 365 DNALLSTLIHWLCKEGRVTEA-RKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 473 DFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
D ER+ PN+ TY+ + L + G V++G
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEG 454
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/407 (20%), Positives = 163/407 (40%), Gaps = 45/407 (11%)
Query: 288 SNRFERAVEL---VSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
+ R+E ++ + + +FG + + + L+Q R D F+ ++S G P
Sbjct: 133 AGRYESSMRIFLRIPDFGVKRSVR-SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNI 191
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFF--------------- 389
N+L+ L ++N ++ Y++L ++ + PN+VT +L +
Sbjct: 192 FTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 390 --------------------CKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
CKLG A + + + + PN + Y +I LC +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
EA + + PD + +ALC + K+DE L L+ MP+++ S
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 490 FVSALCRAGRVEDGYLMRGDLDK--VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
+ LC+ GRV + + + +K + + +Y +I G + A RL +M E+
Sbjct: 372 LIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 548 ELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLARE 606
+ +Y ++ L N + L EM+ G P+ F +G K + A +
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVS 653
+ + NG + S ++ + K + + + ++ H++ VS
Sbjct: 492 IVSMAVMNGKVDKESWELFLKKF---AGELDKGVLPLKELLHEISVS 535
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 167/392 (42%), Gaps = 14/392 (3%)
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYE----LLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
+ P K N+ I LLR L YE + + + + + ++ ++N +L +
Sbjct: 113 YPPIKCGENLFID-LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRF 171
Query: 396 DVALELF-NSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
D+ +F NS+ FG++PN L+ LC + AY+VL G P+ T++T
Sbjct: 172 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT 231
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK-- 512
+ ++ +L+ L+R + P+++TY+ + C+ GR + + D++K
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 513 -VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
+Y MI K + A + EM E+ + S V+ L D+
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE-DHKVDEA 350
Query: 572 FNLLEMMTHGK--PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
L M P + ++ I + AR++F+ ++ I + + L+
Sbjct: 351 CGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLI-AG 409
Query: 630 YFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+++A R ++D+ + YN +I GL K+ + + EML++G P+
Sbjct: 410 MCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN 469
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
+ +L + L L + +A+ +V++ G+
Sbjct: 470 KTTFLILFEGLQKLGKEEDAMKIVSMAVMNGK 501
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 125/300 (41%), Gaps = 7/300 (2%)
Query: 182 AIAGKPDI--ALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG-YE 238
A+ K DI A +L + GL + Y +L + + ++ RG Y
Sbjct: 200 ALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYP 259
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
T +++ CK GR EA ++ + + E + +I LC+ + A +
Sbjct: 260 DATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMF 319
Query: 299 SEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR 356
E + +P + I L + ++DEA +R K +P + LI L +
Sbjct: 320 DEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR-KMLKNNCMPDNALLSTLIHWLCK 378
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMA 416
E R+ + +L + + I P+++T N ++ C+ G + A L++ + PN
Sbjct: 379 EGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT 437
Query: 417 YKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFAL 476
Y LI L +G KE RVL G FP++ TF L L + K ++ ++ A+
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 37/284 (13%)
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P+ + + + G + + A+ V E M G +A++ ++M Y + R S+A
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 643 FNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
+D+ ++++ + Y MI LCK K+ A + EML+ P ++ LC
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 702 LKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSML 761
+ EA L R++ N + ++++S ++ C KEG
Sbjct: 344 DHKVDEACGL-------WRKMLK--NNCMPDNALLSTLIHWLC------KEG-------- 380
Query: 762 TLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQ 820
RV+ + + +E P + TYN L+ + ++ +A L+D M +
Sbjct: 381 -----------RVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 821 RGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
R +PN +TY ++ G S +G E R + EML+ G P + T
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 15/290 (5%)
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRN-GIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
N+ ++ + + DL +F+ + + GI N + L++K+ + I A + ++I
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 217
Query: 647 RHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
+V + Y ++ G + A + EML G P Y VL+ C L R+
Sbjct: 218 PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRF 277
Query: 706 YEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFL------DSS 759
EA +++ EK N + + MI R E L DSS
Sbjct: 278 SEAATVMDDMEK-----NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSS 332
Query: 760 MLTLIIGAFSGCLRVSYSIQELEELIAK-CFPVDIYTYNLLMRKLTHHDMDKACELFDRM 818
+ +I A +V + +++ C P + L+ + +A +LFD
Sbjct: 333 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 819 CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
++G P+ TY + G G EA R +M ++ P T NV+
Sbjct: 393 -EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVL 441
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 179/435 (41%), Gaps = 52/435 (11%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMN-ETC----------- 374
L+ F + +GF Y++L+ L+R + V +L M ETC
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 375 ------------------------IPPNMVTMNAVLCFFCKLGMVDVALELF-NSRSQFG 409
+ P++ ++ L G V+++ +L ++ G
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGY-FPDRRTFSTLANALCRECKIDEM 468
L PN + L+ C +G A+ V+ +G +P+ T+STL + L + E
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 469 WDLL-DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIM 524
+L D + P+ T++ ++ CRAG VE + + K ++Y+ ++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 525 GFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPH 584
GF K + A + E+K+ G +L Y +++C + LL M +
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR-NGETDEAMKLLGEMKASRCR 370
Query: 585 CDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
D +N + G + + A ++ + G+ N S +++ + + + A++F
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 643 FNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
+ + + + +N ++V LC+S +I + + L++GL P + + +V+ +C
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 702 LKRYYEAVNLVNVYE 716
++ LV+V+E
Sbjct: 491 ERK------LVHVFE 499
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 294 AVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGR 353
VE + G S P Y + L R EA+E F EG P V +N++I
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMING 277
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
R ++ ++L M + PN+ +A++ FCK+G + A + F+ + GL +
Sbjct: 278 FCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLD 337
Query: 414 YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
+ Y L+ C +G EA ++L + D T++ + L E + +E +LD
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 474 FALERRFMPNSSTYSRFVSALCRAGRVEDG 503
N +Y ++ALC G +E
Sbjct: 398 QWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 184/457 (40%), Gaps = 45/457 (9%)
Query: 200 QGLDLDGFGYHILLNSLAENNCYNAFDVIANQI---CMRGYESHMTNVIVIKHLCKQGRL 256
+G + + Y +LL++L + + A D I +Q+ R ES N++ +H +
Sbjct: 83 KGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM--RHFSRSDLH 140
Query: 257 EEAEAHLNGL-VGSGKELHRSELSFLIGVLCESNR--FERAVELVSEFGTSL-PLENAYG 312
++ N + V + + + +S + +L +S R + L ++ L P +
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 313 VWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM-N 371
+ ++ + G ++ A + + S P + Y+ L+ L +R K+ EL DM +
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 372 ETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPK 431
+ I P+ VT N ++ FC+ G V+ A ++ + + G +PN Y L+ C G +
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 432 EAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFV 491
EA + TG D ++TL N CR + DE LL R ++ TY+ +
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 492 SALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
L GR E+ A ++L + +G L +
Sbjct: 381 RGLSSEGRSEE--------------------------------ALQMLDQWGSEGVHLNK 408
Query: 552 SSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK--PHCDIFNSFIDGAMHANKPDLAREVFE 609
SYR +L+ L + + L +M+ PH +N + + ++ V
Sbjct: 409 GSYRIILNALC-CNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
R G++ S V++S + R++ + +
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 137/307 (44%), Gaps = 12/307 (3%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDL-DGFGYHILLNSL-AENNCYNAFDVIANQI 232
+ LV + G + A ++ M+ G+ + Y L++ L A + A ++ + I
Sbjct: 200 NILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMI 259
Query: 233 CMRGYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
G +T ++I C+ G +E A+ L+ + +G + S L+ C+ +
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 292 ERAVELVSEFG-TSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK---VR 346
+ A + E T L L+ Y + + G DEA++ + + S C+ +
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR----CRADTLT 375
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN+++ L E R ++ ++L + N + +L C G ++ A++ + S
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
+ G+ P++ + L++ LC G + RVL G P +++ + ++C+E K+
Sbjct: 436 ERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLV 495
Query: 467 EMWDLLD 473
+++LLD
Sbjct: 496 HVFELLD 502
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 121/289 (41%), Gaps = 38/289 (13%)
Query: 582 KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI-MTNASSQILVMKSYFRSRRISDAL 640
+P+ IFN + + A V E M+R+GI N+ + +M F R +A+
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 641 RFFNDIRHQVVVSTK--LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQK 698
F D+ + +S +N MI G C++ + + A ++ M K G NP++ Y L+
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 699 LCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDS 758
C + + EA + +K G + LD+
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLK----------------------------------LDT 338
Query: 759 SMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDR 817
T ++ F +++ L E+ A D TYN+++R L+ ++A ++ D+
Sbjct: 339 VGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQ 398
Query: 818 MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRN 866
G+ N+ +Y ++ + +G ++A +++ M ++G P T N
Sbjct: 399 WGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWN 447
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 17/221 (7%)
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
+ DF++ C+ P+ Y L+ G+ GK A ++ GL LD GY L+N
Sbjct: 290 ILDFMKK-NGCN-PNVYNY-SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 215 SLAENNCYN-AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
N + A ++ R +T ++++ L +GR EEA L+ G L
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 274 HRSELSFLIGVLCESNRFERAVE---LVSEFGTSLPLENAYGVWIRGLVQGGRLDEALE- 329
++ ++ LC + E+AV+ ++SE G P + + L + G + +
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGI-WPHHATWNELVVRLCESGYTEIGVRV 465
Query: 330 ---FFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL 367
F R G +P + ++ + +E +L V+ELL
Sbjct: 466 LIGFLRI-----GLIPGPKSWGAVVESICKERKLVHVFELL 501
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 208/525 (39%), Gaps = 23/525 (4%)
Query: 250 LCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAV---ELVSEFGTSLP 306
L + G A+ + G+ + LI + ++ R R E + +FG P
Sbjct: 168 LNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFK-P 226
Query: 307 LENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYEL 366
Y + LV+ G D AL + ++ +G V + IL+ L + R++++ E+
Sbjct: 227 RVFLYNRIMDALVKNGYFDLALAVYEDFKE-DGLVEESTTFMILVKGLCKAGRIEEMLEI 285
Query: 367 LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCW 426
L M E P++ A++ G +D +L +++ + + P+ MAY L++ LC
Sbjct: 286 LQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCK 345
Query: 427 DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
DG + Y + G DR + L + K+ +L + ++ ++ +
Sbjct: 346 DGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Query: 487 YSRFVSALCRAGRVEDGY--LMRGDLDKVTARFSYAKMIM-GFIKSNRGDIAARLLVEMK 543
Y+ + LC +V+ Y +++ F IM ++ NR + +L +
Sbjct: 406 YNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIG 465
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRF----FNLLEMMTHGKPHCDIFNSFIDGAMHAN 599
E GY + S Y LL D + F +L+ HG ++N ++
Sbjct: 466 ELGYPV--SDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGS--VSVYNILMEALYKMG 521
Query: 600 KPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYN 658
+ +F M++ G ++SS + + + + A F I V S Y
Sbjct: 522 DIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYL 581
Query: 659 RMIVGLCKSDKADIALELCFEML-KVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEK 717
+ GLC+ + D + L E L V P Y + V +C + + +V+ +
Sbjct: 582 SLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQ 641
Query: 718 AGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT 762
G + N +++ ++IS H + + RE E ++T
Sbjct: 642 EGVFI-----NEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMT 681
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/533 (20%), Positives = 199/533 (37%), Gaps = 52/533 (9%)
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLK-DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
DS+G P + ++ ILI R+ +NR VY + M + P + N ++ K G
Sbjct: 185 DSQGRPPSEKQFEILI-RMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
D+AL ++ + GL + L+ LC G +E +L+ PD ++
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTA 303
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVT 514
+ L E +D + D P+ Y V LC+ GRVE GY
Sbjct: 304 MIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY---------- 353
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
L +EMK K + R YR ++ + R+ NL
Sbjct: 354 ----------------------ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC-NL 390
Query: 575 LEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
E + DI +N+ I G N+ D A ++F++ + + + +M +Y
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV 450
Query: 633 SRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECY 692
R+SD I + + LC ++ + F +LK + S+ Y
Sbjct: 451 MNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVY 510
Query: 693 EVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKE 752
+L++ L + ++++L K G S ++ + + +V +C + E
Sbjct: 511 NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Query: 753 GEFLDSSMLTLIIGAFSGCLRVSYSIQELEE---LIAKCF------PVDIYTYNLLMRKL 803
+ S I A+ + I E++ L+ +C P++ +
Sbjct: 571 MSCVPS------IAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVC 624
Query: 804 THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
+ +K ++ D M Q G+ N Y + G S HG A+ E+ K+
Sbjct: 625 KGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 184/448 (41%), Gaps = 25/448 (5%)
Query: 101 TFVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILS------CARLRPL 154
+ V VL+ G D KFF WAG+Q + H + A L+ A P
Sbjct: 126 SIVAEVLKLGNDAA---VAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPE 182
Query: 155 VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLN 214
+ D S P + + L+ +A + ++ +M+ G F Y+ +++
Sbjct: 183 LMD------SQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMD 236
Query: 215 SLAENNCYNAFDVIANQICMRG-YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
+L +N ++ + G E T +I++K LCK GR+EE L + + +
Sbjct: 237 ALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP 296
Query: 274 HRSELSFLIGVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFF 331
+ +I L + ++ + E P AYG + GL + GR++ E F
Sbjct: 297 DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELF 356
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+ + + + ++ Y +LI + + +++ L D+ ++ ++ NAV+ C
Sbjct: 357 MEMKGKQILIDREI-YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCS 415
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
+ VD A +LF + L P++ +++ + VL GY P
Sbjct: 416 VNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGY-PVSDY 474
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD 511
+ LC + + + M + + L+ + + S Y+ + AL + G ++ + ++
Sbjct: 475 LTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMR 534
Query: 512 KV---TARFSYAKMIMGFIKSNRGDIAA 536
K+ SY+ I F++ +GD+ A
Sbjct: 535 KLGFEPDSSSYSIAICCFVE--KGDVKA 560
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 154/378 (40%), Gaps = 7/378 (1%)
Query: 187 PDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVI- 245
P+ AL L + + G D Y L+ LA++ ++A D I + R + +
Sbjct: 62 PEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL 305
+I+H K G +++A + + L+ LI VL ++ E+A
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 306 --PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P ++ + I+G + + A + F + + E P V YN LIG L R + +
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME-VQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
LL DM + I PN VT ++ C G + A +L G P + Y L+
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
L G EA +L PD ++ L N LC EC++ E + +L + PN
Sbjct: 301 LGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPN 360
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLV 540
++TY + CR + G + + ++ M+ G IK D A +L
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 541 EMKEKGYELKRSSYRHVL 558
M +K +++++L
Sbjct: 421 VMGKKNLSFGSGAWQNLL 438
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 148/383 (38%), Gaps = 10/383 (2%)
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
+EAL F Q ++ GF Y+ LI +L + V ++L + +
Sbjct: 63 EEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ + K G VD A+++F+ + F + LI L +G ++A +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY 504
P+ +F+ L +C + + D LE P+ TY+ + LCR +
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 505 LMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+ D+ K R ++ ++ G + A +L+ +M+ +G + +Y ++ L
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 562 LHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
L EM KP I+N ++ + A V MQ G NA
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 621 SSQILVMKSYFRSRRISDALRFFNDI---RHQVVVSTKLYNRMIVGLCKSDKADIALELC 677
++ +++ + R L N + RH +T + M+ GL K D A +
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPAT--FVCMVAGLIKGGNLDHACFVL 419
Query: 678 FEMLKVGLNPSIECYEVLVQKLC 700
M K L+ ++ L+ LC
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLC 442
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/556 (20%), Positives = 212/556 (38%), Gaps = 12/556 (2%)
Query: 162 FRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC 221
F S P R + +V Y G A RMR +G+ Y L+++ A
Sbjct: 301 FEKISKPSRTEF-GLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 222 YNAFDVIANQICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF 280
+ ++ G E S +T +++ K G E A+ + K L+ S
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 281 LIGVLCESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
+I C++ ERA LV E G P+ Y + G + L F++ ++
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIA-IYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
GF P V Y LI + ++ E+ M E + N+ T + ++ F KL
Sbjct: 479 -GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A +F + G+ P+ + Y +I C G A + ++ + P RTF + +
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY--LMRGDLDKVTA 515
+ + ++ D +P T++ ++ L ++E L L V+A
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 516 -RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+Y K++ G+ A ++ +G ++ +Y +L ++
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 575 LEMMTHGKPHCD-IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
EM P ++N IDG A ++ + M++ G+ + + + + ++
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 634 RRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECY 692
++ A + ++ V + K Y +I G ++ + AL EM +G+ P Y
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 693 EVLVQKLCSLKRYYEA 708
L+ L S EA
Sbjct: 838 HCLLTSLLSRASIAEA 853
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 116/568 (20%), Positives = 215/568 (37%), Gaps = 51/568 (8%)
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
S P +G+ ++ + G + A E F + R + G P Y LI + +
Sbjct: 305 SKPSRTEFGLMVKFYGRRGDMHRARETFERMR-ARGITPTSRIYTSLIHAYAVGRDMDEA 363
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+ M E I ++VT + ++ F K G + A F+ + + N Y +I
Sbjct: 364 LSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYA 423
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFA--LERRFM 481
C + A ++R G + T+ + DE L+ F E F
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVA--DEKKGLVVFKRLKECGFT 481
Query: 482 PNSSTYSRFVSALCRAGRV----EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAAR 537
P TY ++ + G++ E +M+ + K + +Y+ MI GF+K A
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK-TYSMMINGFVKLKDWANAFA 540
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMT-HGKPHCDIFNSFIDGAM 596
+ +M ++G + Y +++ M N + EM +P F I G
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG-- 598
Query: 597 HANKPDLAR--EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR-HQVVVS 653
+A D+ R EVF++M+R G + + ++ R++ A+ +++ V +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 654 TKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVN 713
Y +++ G A E + GL+ I YE L++ C R A+ +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 714 VYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLR 773
SF+ N+L+ +V+ + DL
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAA-DL-------------------------- 751
Query: 774 VSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGL 832
IQ++++ K DI+TY + + DM++A + + M G++PN TY
Sbjct: 752 ----IQQMKKEGVKP---DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 833 MAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ G++ ++A EM G P
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKP 832
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 126/320 (39%), Gaps = 13/320 (4%)
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG 236
++ GYA +G +L + MR G ++ L+N L E I +++ + G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 237 YESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAV 295
++ T +++ G +A + L G ++ L+ C+S R + A+
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 296 ELVSEFGT-SLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGR 353
+ E ++P + Y + I G + G + EA + +Q + EG P Y I
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEGVKPDIHTYTSFISA 773
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
+ + + + +M + PN+ T ++ + + + + AL + G+ P+
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 414 YMAYKYLILTLCWDGCPKEAY------RVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
Y L+ +L EAY + + G D T + L CKI+
Sbjct: 834 KAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCL---CKIEA 890
Query: 468 MWDLLDFALERRFMPNSSTY 487
L L++ F P+ S++
Sbjct: 891 SGGELTETLQKTFPPDWSSH 910
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 21/390 (5%)
Query: 320 QGGRLD-EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+GGR D ++ ++ EGF P + R+ ++ R + + ++++ M + I +
Sbjct: 187 RGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVS 246
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
+ + ++ F + G A++LFN Q G SPN + Y LI G EA+ VL
Sbjct: 247 VNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLS 306
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
G PD + + + R + +E + +R+ +P+ T++ +S+LC +G
Sbjct: 307 KVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 499 ------RVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
R+ G + D D VT + F K A ++L M K + L
Sbjct: 367 KFDLVPRITHG--IGTDFDLVTGNL----LSNCFSKIGYNSYALKVLSIMSYKDFALDCY 420
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD--IFNSFIDGAMHANKPDLAREVFEL 610
+Y L L PR + +++ K H D ++ ID + K + A +F+
Sbjct: 421 TYTVYLSALCRGGAPRAA-IKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKR 479
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRMIVGLCKSDK 669
+ S + +K R++RI +A D++ + + + Y +I GLCK +
Sbjct: 480 CILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKE 539
Query: 670 ADIALELCFEMLKVGL----NPSIECYEVL 695
+ ++ E ++ G+ N + Y +L
Sbjct: 540 TEKVRKILRECIQEGVELDPNTKFQVYSLL 569
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 99/513 (19%), Positives = 187/513 (36%), Gaps = 96/513 (18%)
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI---LTLCWDGCPKEAYRVLRSSS 441
+L F + + D A+E++ S FG PN A ++ L E + +R
Sbjct: 114 LLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRF-- 171
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR------FMPNSSTYSRFVSALC 495
R F + AL C DL+ + + F PN + + + C
Sbjct: 172 --------RNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCC 223
Query: 496 RAGRVEDGYLMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
R G V + + + G + S ++ ++ GF +S A L +M + G
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG------ 277
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQ 612
C P+ + S I G + D A V +Q
Sbjct: 278 -------C---------------------SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQ 309
Query: 613 RNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKAD 671
G+ + L++ +Y R R +A + F + + ++V + ++ LC S K D
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Query: 672 IA------------------LELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVN 713
+ L CF K+G N Y + V + S K +
Sbjct: 370 LVPRITHGIGTDFDLVTGNLLSNCFS--KIGYNS----YALKVLSIMSYKDFALDCYTYT 423
Query: 714 VYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLR 773
VY A R + + ++ +I KE + LD+ + II + +
Sbjct: 424 VYLSALCRGGAPRAAIKMYKIII--------------KEKKHLDAHFHSAIIDSLIELGK 469
Query: 774 VSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGL 832
+ ++ + I + +P+D+ +Y + ++ L +++A L M + G+ PNR TY
Sbjct: 470 YNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRT 529
Query: 833 MAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTR 865
+ G ++ ++ + E +++G NT+
Sbjct: 530 IISGLCKEKETEKVRKILRECIQEGVELDPNTK 562
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 197/473 (41%), Gaps = 35/473 (7%)
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
V++AL+L QFG+ P+ L+ + + A + G + S
Sbjct: 217 VNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSL 276
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDK 512
C + D+ W+LL P+ ++ F+ LC+AG +++ L + L
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 513 VTA-RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
++ S + +I GF K + + A +L+ + + SS+ + M T F
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 572 FNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
+ E+ P C + + IDG + + D A + F + ++G + ++ +++ +
Sbjct: 397 QEIFELGL--LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 632 RSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
R ISDA F +++ + + + YN ++ G K+ + + EL EM G++P +
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISP-----------E 739
Y +L+ + EA +++ + G F+ + L F +I
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRG-----FVPSTLAFTDVIGGFSKRGDFQEAFI 569
Query: 740 VYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLL 799
++ DLR + D + ++ + R+ +I +L+ D+ YN L
Sbjct: 570 LWFYMADLRMKP-----DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Query: 800 MRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
+ + D++KACEL M QRG+ PN T+ + G E KR+V+
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL-------EGKRFVN 670
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 14/364 (3%)
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+ELLM M I P++V + CK G + A + FG+S + ++ +I
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
C G P+EA +++ S P+ +S+ + +C + + E +P+
Sbjct: 351 FCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDLDKV--TARFSYAKMIMGFIKSNRGDI--AARLL 539
Y+ + C GR + + G L K + + +++G S G I A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC-SRFGSISDAESVF 466
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHA 598
MK +G +L +Y +++H F + EM + G P +N I +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR---FFNDIRHQVVVSTK 655
D A E+ + R G + + + V+ + + +A + D+R + V T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT- 585
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
+ ++ G CK+ + + A+ L ++L GL P + Y L+ CS+ +A L+ +
Sbjct: 586 -CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 716 EKAG 719
+ G
Sbjct: 645 VQRG 648
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 147/394 (37%), Gaps = 46/394 (11%)
Query: 224 AFDVIANQICMRGYESHMTNVI-----------------VIKHLCKQGRLEEAEAHLNGL 266
AF V +++C G+ T+V+ VI CK G+ EEA
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI------ 361
Query: 267 VGSGKELHRSEL-------SFLIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIR 316
K +H L S + +C + RA + + E G LP Y I
Sbjct: 362 ----KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDCVCYTTMID 416
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
G GR D+A ++F S G P ILIG R + D + +M +
Sbjct: 417 GYCNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
++VT N ++ + K ++ EL + G+SP+ Y LI ++ G EA +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
+ G+ P F+ + + E + L + + R P+ T S + C+
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK 595
Query: 497 AGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
A R+E ++ L + Y +I G+ + A L+ M ++G L S
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM-LPNES 654
Query: 554 YRHVLHCLLHMD---NPRTRFFNLLEMMTHGKPH 584
H L L N T LLE + K H
Sbjct: 655 THHALVLGLEGKRFVNSETHASMLLEEIIVAKWH 688
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 160/425 (37%), Gaps = 73/425 (17%)
Query: 459 LCRECKIDE------MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
L ++C +E M DL + ++RR + + +S + R +V
Sbjct: 172 LVKKCSGEERSLCLVMKDLFETRIDRRVL--ETVFSILIDCCIRERKV-----------N 218
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+ + +Y G S RG + L ++ G EL R H+L H++ F
Sbjct: 219 MALKLTYKVDQFGIFPS-RGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLF 277
Query: 573 --------------NLLEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI 616
LL M H +P F FID A A V ++ GI
Sbjct: 278 IRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGI 337
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
++ S V+ + + + +A++ + R + + +Y+ + +C + A +
Sbjct: 338 SQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIF--VYSSFLSNICSTGDMLRASTI 395
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
E+ ++GL P CY ++ C+L R +A K+G
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN---------------- 439
Query: 737 SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTY 796
P + S T++IGA S +S + + + +D+ TY
Sbjct: 440 PPSLTTS------------------TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 797 NLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK 855
N LM H ++K EL D M G+ P+ TY ++ H G DEA + E+++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 856 KGFNP 860
+GF P
Sbjct: 542 RGFVP 546
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 197/473 (41%), Gaps = 35/473 (7%)
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
V++AL+L QFG+ P+ L+ + + A + G + S
Sbjct: 217 VNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSL 276
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDK 512
C + D+ W+LL P+ ++ F+ LC+AG +++ L + L
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 513 VTA-RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
++ S + +I GF K + + A +L+ + + SS+ + M T F
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIF 396
Query: 572 FNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
+ E+ P C + + IDG + + D A + F + ++G + ++ +++ +
Sbjct: 397 QEIFELGL--LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 632 RSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
R ISDA F +++ + + + YN ++ G K+ + + EL EM G++P +
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVA 514
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISP-----------E 739
Y +L+ + EA +++ + G F+ + L F +I
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRG-----FVPSTLAFTDVIGGFSKRGDFQEAFI 569
Query: 740 VYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLL 799
++ DLR + D + ++ + R+ +I +L+ D+ YN L
Sbjct: 570 LWFYMADLRMKP-----DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTL 624
Query: 800 MRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
+ + D++KACEL M QRG+ PN T+ + G E KR+V+
Sbjct: 625 IHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL-------EGKRFVN 670
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 14/364 (3%)
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+ELLM M I P++V + CK G + A + FG+S + ++ +I
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
C G P+EA +++ S P+ +S+ + +C + + E +P+
Sbjct: 351 FCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 484 SSTYSRFVSALCRAGRVEDGYLMRGDLDKV--TARFSYAKMIMGFIKSNRGDI--AARLL 539
Y+ + C GR + + G L K + + +++G S G I A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGAC-SRFGSISDAESVF 466
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHA 598
MK +G +L +Y +++H F + EM + G P +N I +
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALR---FFNDIRHQVVVSTK 655
D A E+ + R G + + + V+ + + +A + D+R + V T
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVT- 585
Query: 656 LYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
+ ++ G CK+ + + A+ L ++L GL P + Y L+ CS+ +A L+ +
Sbjct: 586 -CSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLM 644
Query: 716 EKAG 719
+ G
Sbjct: 645 VQRG 648
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 147/394 (37%), Gaps = 46/394 (11%)
Query: 224 AFDVIANQICMRGYESHMTNVI-----------------VIKHLCKQGRLEEAEAHLNGL 266
AF V +++C G+ T+V+ VI CK G+ EEA
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI------ 361
Query: 267 VGSGKELHRSEL-------SFLIGVLCESNRFERAVEL---VSEFGTSLPLENAYGVWIR 316
K +H L S + +C + RA + + E G LP Y I
Sbjct: 362 ----KLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDCVCYTTMID 416
Query: 317 GLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIP 376
G GR D+A ++F S G P ILIG R + D + +M +
Sbjct: 417 GYCNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
++VT N ++ + K ++ EL + G+SP+ Y LI ++ G EA +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEI 535
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
+ G+ P F+ + + E + L + + R P+ T S + C+
Sbjct: 536 ISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCK 595
Query: 497 AGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
A R+E ++ L + Y +I G+ + A L+ M ++G L S
Sbjct: 596 AQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM-LPNES 654
Query: 554 YRHVLHCLLHMD---NPRTRFFNLLEMMTHGKPH 584
H L L N T LLE + K H
Sbjct: 655 THHALVLGLEGKRFVNSETHASMLLEEIIVAKWH 688
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 160/425 (37%), Gaps = 73/425 (17%)
Query: 459 LCRECKIDE------MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
L ++C +E M DL + ++RR + + +S + R +V
Sbjct: 172 LVKKCSGEERSLCLVMKDLFETRIDRRVL--ETVFSILIDCCIRERKV-----------N 218
Query: 513 VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF 572
+ + +Y G S RG + L ++ G EL R H+L H++ F
Sbjct: 219 MALKLTYKVDQFGIFPS-RGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLF 277
Query: 573 --------------NLLEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI 616
LL M H +P F FID A A V ++ GI
Sbjct: 278 IRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGI 337
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
++ S V+ + + + +A++ + R + + +Y+ + +C + A +
Sbjct: 338 SQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIF--VYSSFLSNICSTGDMLRASTI 395
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
E+ ++GL P CY ++ C+L R +A K+G
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN---------------- 439
Query: 737 SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTY 796
P + S T++IGA S +S + + + +D+ TY
Sbjct: 440 PPSLTTS------------------TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 797 NLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK 855
N LM H ++K EL D M G+ P+ TY ++ H G DEA + E+++
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR 541
Query: 856 KGFNP 860
+GF P
Sbjct: 542 RGFVP 546
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 11/292 (3%)
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI- 351
RA + EFG P + + L ++ A EFF K G VP Y+IL+
Sbjct: 159 RAFNRMVEFGIK-PCVDDLDQLLHSLCDKKHVNHAQEFF-GKAKGFGIVPSAKTYSILVR 216
Query: 352 --GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
R+ + + V++ +++ N C+ +++ NA+L CK G VD ++F G
Sbjct: 217 GWARIRDASGARKVFDEMLERN--CVV-DLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
L P+ ++ I C G AY+VL P+ TF+ + LC+ K+D+ +
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGF 526
LLD +++ P++ TY+ ++ C V + +D+ R +Y ++
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMM 578
I+ R D A + M E+ + ++Y ++H L+ EMM
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 155/386 (40%), Gaps = 37/386 (9%)
Query: 121 KFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCS-FPHRARYHDTLVV 179
+FF WA R P F H+ ++ + IL ++ L++DFL + R + F ++ +
Sbjct: 87 RFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFR 146
Query: 180 GYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYES 239
Y+ A P A RM G+ C + D + + +C + + +
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGI----------------KPCVDDLDQLLHSLCDKKHVN 190
Query: 240 HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS 299
H +A G+V S K S L + +++ + + +
Sbjct: 191 HAQEFF-------------GKAKGFGIVPSAKTY--SILVRGWARIRDASGARKVFDEML 235
Query: 300 EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
E + L AY + L + G +D + F Q+ + G P + I I
Sbjct: 236 ERNCVVDLL-AYNALLDALCKSGDVDGGYKMF-QEMGNLGLKPDAYSFAIFIHAYCDAGD 293
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
+ Y++L M + PN+ T N ++ CK VD A L + Q G +P+ Y
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 420 LILTLCWDGCP-KEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
++ C D C A ++L T PDR T++ + L R + D ++ + ER
Sbjct: 354 IMAYHC-DHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSER 412
Query: 479 RFMPNSSTYSRFVSALCR-AGRVEDG 503
+F P +TY+ + L R G++E+
Sbjct: 413 KFYPTVATYTVMIHGLVRKKGKLEEA 438
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 147/341 (43%), Gaps = 22/341 (6%)
Query: 538 LLVEMKEKGY-ELKRSSYRHVLHCLLHMDNPRT--RFFNLLEMMTHG-KPHCDIFNSFID 593
L+E +E Y E+ + V + P R FN M+ G KP D + +
Sbjct: 124 FLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFN--RMVEFGIKPCVDDLDQLLH 181
Query: 594 GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVV 652
+ A+E F + GI+ +A + ++++ + R R S A + F++ + VV
Sbjct: 182 SLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVV 241
Query: 653 STKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
YN ++ LCKS D ++ EM +GL P + + + C + A ++
Sbjct: 242 DLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVL 301
Query: 713 NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD----LRRE--KEGEFLDSSMLTLIIG 766
+ ++ + NV F+ +I + VD L E ++G D+ I+
Sbjct: 302 DRMKR-----YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMA 356
Query: 767 AFSGCLRVSYSIQELEELI-AKCFPVDIYTYNLLMRKLTH-HDMDKACELFDRMCQRGLE 824
V+ + + L + KC P D +TYN++++ L D+A E+++ M +R
Sbjct: 357 YHCDHCEVNRATKLLSRMDRTKCLP-DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 825 PNRWTYGLMAHGF-SNHGRKDEAKRWVHEMLKKGFNPPENT 864
P TY +M HG G+ +EA R+ M+ +G P T
Sbjct: 416 PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 113/252 (44%), Gaps = 13/252 (5%)
Query: 625 LVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKV 683
+V ++Y R+ S+A R FN + + ++++ LC + A E +
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 684 GLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHS 743
G+ PS + Y +LV+ ++ +A V+++ R + + ++L +++++
Sbjct: 203 GIVPSAKTYSILVRGWARIR---DASGARKVFDEMLER--NCVVDLLAYNALLDALCKSG 257
Query: 744 CVD--LRREKE----GEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
VD + +E G D+ + I A+ V + + L+ + ++YT+N
Sbjct: 258 DVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFN 317
Query: 798 LLMRKLTHHD-MDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
+++ L ++ +D A L D M Q+G P+ WTY + +H + A + + M +
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRT 377
Query: 857 GFNPPENTRNVI 868
P +T N++
Sbjct: 378 KCLPDRHTYNMV 389
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 161/387 (41%), Gaps = 40/387 (10%)
Query: 279 SFLIGVLCESNRFERAVELVSEFG-TSLPLENA-YGVWIRGLVQGGRLDEALEFFRQKRD 336
+ L G + N + +A+EL+ E + +++ YG + GR +EA F +Q +
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMK- 264
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
EG P Y+ L+ + K EL+ +M + PN V M +L + K G+ D
Sbjct: 265 VEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFD 324
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
+ EL + G + N M Y L+ L G +EA + G G D S +
Sbjct: 325 RSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMI 384
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSR--------FVSALCRAGRVEDGYLMRG 508
+ALCR + E +L + +TY + + A CRAG +E M
Sbjct: 385 SALCRSKRFKEAKEL--------SRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
Query: 509 DLDKVTARFSYAK---MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
+D+ Y +I FIK +A + ++M KG+ L+ +++ L +
Sbjct: 437 KMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKI- 495
Query: 566 NPRTRFFNLLEMMTHGKP------HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+ F++ M+ + K H I + I G +L ++ + +++ N M +
Sbjct: 496 RAQAEAFSVYNMLRYSKRTICKELHEKILHILIQG-------NLLKDAYIVVKDNAKMIS 548
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDI 646
+ +K + R+ IS + ND+
Sbjct: 549 QPT----LKKFGRAFMISGNINLVNDV 571
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/376 (18%), Positives = 141/376 (37%), Gaps = 43/376 (11%)
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
E+ + + N+ N++L K G +D ++LF+ + GL P+ + Y L L
Sbjct: 152 EIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTL-LAG 210
Query: 425 CW---DGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
C +G PK A ++ G D + T+ + +E + +
Sbjct: 211 CIKVKNGYPK-AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARL 538
PN YS +++ G + + ++ V + ++ +IK D + L
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHA 598
L E++ GY Y C+L +DG A
Sbjct: 330 LSELESAGYAENEMPY-----CML-----------------------------MDGLSKA 355
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQV-VVSTKLY 657
K + AR +F+ M+ G+ ++ + +++ + RS+R +A D +
Sbjct: 356 GKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVML 415
Query: 658 NRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEK 717
N M+ C++ + + + + +M + ++P + +L++ K + A
Sbjct: 416 NTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHS 475
Query: 718 AGRRLTSFLGNVLLFH 733
G RL L + L++H
Sbjct: 476 KGHRLEEELCSSLIYH 491
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 4/225 (1%)
Query: 242 TNVIVIKHLCKQGRLEEAEAH--LNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS 299
T +I++ H C+ + H LN +V +G E + + LCE+ R + A +L+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 300 EFGT--SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
E S P Y ++ L + L EF + RD P V + ILI +
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
L++ L+ + P+ N ++ FC L A+ ++ + G+ P+ + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRE 462
LI L G +EA L++ GY PD T+++L N +CR+
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 2/194 (1%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P + + +R L + GR+DEA + ++ + P YN L+ L + L VYE
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDTYTYNFLLKHLCKCKDLHVVYE 215
Query: 366 LLMDM-NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
+ +M ++ + P++V+ ++ C + A+ L + G P+ Y ++
Sbjct: 216 FVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
C EA V + G PD+ T++TL L + +++E L ++ + P++
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 485 STYSRFVSALCRAG 498
+TY+ ++ +CR G
Sbjct: 336 ATYTSLMNGMCRKG 349
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 1/170 (0%)
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
+ G P +V +I + L R+ + +L+ ++ E PP+ T N +L CK +
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 397 VALELFNS-RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
V E + R F + P+ +++ LI +C +EA ++ G+ PD ++T+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL 505
C K E + E P+ TY+ + L +AGRVE+ +
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 3/184 (1%)
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPE 739
M+ GL P ++ V+ LC R EA +L+ + ++ N LL H +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 740 --VYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
V + VD R+ D T++I + ++ + +L F D + YN
Sbjct: 210 LHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYN 269
Query: 798 LLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
+M+ T +A ++ +M + G+EP++ TY + G S GR +EA+ ++ M+
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 857 GFNP 860
G+ P
Sbjct: 330 GYEP 333
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 123/355 (34%), Gaps = 77/355 (21%)
Query: 355 LRENRLKDVYELLMDMNETC-IPPNMVTMNAVLCFFCKLGMVDVALELFNS--RSQFGLS 411
+ L D L + T IP ++ N+VL + + +V+ ++LF +SQ
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 412 PNYMAYKYLILTLC--WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
P + L+ C D +RVL G PD+ T +LC ++DE
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY----LMRGDLDKVTARFSYAKMIMG 525
DL+ E+ P++ TY+ + LC+ + Y MR D D S+ +I
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 526 FIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHC 585
S A L+ ++ G+ KP C
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGF----------------------------------KPDC 265
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
++N+ + G +K A V++ M+ G+ + QI
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD---QI--------------------- 301
Query: 646 IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
YN +I GL K+ + + A M+ G P Y L+ +C
Sbjct: 302 ----------TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 156/396 (39%), Gaps = 26/396 (6%)
Query: 119 CLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLV 178
+FF WA + F H T+ ++ IL+ R + L + + + +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETF-TIAM 236
Query: 179 VGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE 238
+A A + A+ + M+ + + LL+SL V+ +++ R
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 296
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
+ MT +++ C+ L EA N ++ G + + ++ L S + A++L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 356
Query: 299 SEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR 356
+ P N +Y + IR + ++ A+E+F DS G P Y LI
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGT 415
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN--- 413
+ +L VYELL +M E PP+ T NA++ M + A ++N Q + P+
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 414 --------YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
+MA Y + W+ K+ G PD +++ L L E K
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKK-----------GICPDDNSYTVLIRGLIGEGKS 524
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
E L+ L++ Y++F + R G+ E
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 145/332 (43%), Gaps = 14/332 (4%)
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLA 604
+G+ +Y ++ L T L EM T G + F + A + A
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 605 REVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGL 664
+FELM++ + ++ S R++ +A F+ ++ + + Y ++ G
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 308
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG----- 719
C+ A + +M+ GL P I + V+++ L ++ +A+ L +V + G
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNV 368
Query: 720 RRLTSFLGNVLLFHSM-ISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSI 778
R T + + SM + E + VD G D+++ T +I F ++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVD-----SGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 779 QELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGF 837
+ L+E+ K P D TYN L++ + + M + A ++++M Q +EP+ T+ ++ +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 838 SNHGRKDEAKRWV-HEMLKKGFNPPENTRNVI 868
R E R V EM+KKG P +N+ V+
Sbjct: 484 F-MARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/402 (18%), Positives = 167/402 (41%), Gaps = 41/402 (10%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
++ +L ++ +FE V ++ E GT L +E + + ++ +A+ F + +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAVGIFELMKKYK 259
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
+ + N L+ L R K+ ++L D + PNM+T +L +C++ + A
Sbjct: 260 FKIGVET-INCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
++N GL P+ +A+ ++ L +A ++ G P+ R+++ +
Sbjct: 318 ARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS 518
C++ ++ + D ++ P+++ Y+ C
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYT------C----------------------- 408
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR--TRFFNLLE 576
+I GF + D LL EM+EKG+ +Y ++ + + P TR +N +
Sbjct: 409 ---LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM- 464
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
+ +P FN + A ++ R V+E M + GI + +S ++++ +
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 637 SDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELC 677
+A R+ ++ + + + + YN+ + + +I EL
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELA 566
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 123/313 (39%), Gaps = 10/313 (3%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
E F P + Y +L+ R L + + DM + + P++V N +L +
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD 351
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A++LF+ G PN +Y +I C + A +G PD ++ L
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--DKVTA 515
+ K+D +++LL E+ P+ TY+ + + E + + +++
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 516 RFSYAKMIM-GFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
MIM + + ++ + EM +KG +SY ++ L+ R L
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 575 LEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
EM+ G P D +N F +P++ E+ + + +G A+++I +
Sbjct: 532 EEMLDKGMKTPLID-YNKFAADFHRGGQPEIFEELAQRAKFSGKF--AAAEIFARWAQMT 588
Query: 633 SRRISDALRFFND 645
RR RF D
Sbjct: 589 RRRFKQ--RFMED 599
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 14/260 (5%)
Query: 569 TRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVM 627
R +N +M+ G KP N ++G + + K A ++F +M+ G N S +++
Sbjct: 318 ARIWN--DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 628 KSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLN 686
+ + + + A+ +F+D + + +Y +I G K D EL EM + G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 687 PSIECYEVLVQKLCSLKRYYEAVNLVN--VYEKAGRRLTSFLGNVLLFHSMISPEVYHSC 744
P + Y L++ + + K A + N + + + +F ++ S Y
Sbjct: 436 PDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF---NMIMKSYFMARNYEMG 492
Query: 745 VDLRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK 802
+ E K+G D + T++I G + + + LEE++ K + YN
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 803 LTHHDMDKACELFDRMCQRG 822
E+F+ + QR
Sbjct: 553 FHRGGQP---EIFEELAQRA 569
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 12/367 (3%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRD 161
+ RVL GD G++ +FF WA +QPR+ H+ + ++ +ILS R V+ + +
Sbjct: 115 LIERVLNRCGDAGNL--GYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEE 172
Query: 162 FRSCSFPH--RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN 219
R + P LV +A A A+ +L M G + D + + LL++L ++
Sbjct: 173 MRKEN-PQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKH 231
Query: 220 NCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
+ + MR + ++ C+ G++ EA+ L + +G E + +
Sbjct: 232 GSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYT 291
Query: 280 FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFF--RQKR 335
L+ + + A +L+ + P N Y V I+ L + R++EA++ F ++
Sbjct: 292 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 351
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
+ E V V Y L+ + ++ Y +L DM + + P+ +T ++ K
Sbjct: 352 ECEADV---VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 396 DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL 455
+ LEL Q P+ Y +I C G KEA R+ G P TF +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Query: 456 ANALCRE 462
N L +
Sbjct: 469 INGLASQ 475
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 41/310 (13%)
Query: 167 FPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAF 225
FP RY +L+ G+ GK A ++L +M G + D Y LL+ A +A+
Sbjct: 248 FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY 307
Query: 226 DVIANQICMRGYESHMT-NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGV 284
D++ + + RG+E + ++I+ LCK R+EEA + V
Sbjct: 308 DLLRD-MRRRGFEPNANCYTVLIQALCKVDRMEEA----------------------MKV 344
Query: 285 LCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
E R+E ++V+ Y + G + G++D+ +G +P +
Sbjct: 345 FVEMERYECEADVVT-----------YTALVSGFCKWGKIDKCY-IVLDDMIKKGLMPSE 392
Query: 345 VRY-NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
+ Y +I++ +E+ ++ EL+ M + P++ N V+ CKLG V A+ L+N
Sbjct: 393 LTYMHIMVAHEKKES-FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 451
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR--TFSTLANALCR 461
+ GLSP + +I L GC EA + G F + T L N + +
Sbjct: 452 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLK 511
Query: 462 ECKIDEMWDL 471
+ K++ D+
Sbjct: 512 DKKLEMAKDV 521
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 147/362 (40%), Gaps = 44/362 (12%)
Query: 347 YNILIGRLLRENRLKDVYELLMDM---NETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
Y ++ L + + V+ L+ +M N I P + + ++ F MV A+E+ +
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVV--LVQRFASADMVKKAIEVLD 207
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP-DRRTFSTLANALCRE 462
+FG P+ + L+ LC G K+A ++ FP + R F++L CR
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGWCRV 265
Query: 463 CKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKM 522
K+ E +L E F P+ Y+ +S AG++ D Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAY------------------ 307
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK 582
LL +M+ +G+E + Y ++ L +D +EM + +
Sbjct: 308 --------------DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY-E 352
Query: 583 PHCDI--FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
D+ + + + G K D V + M + G+M + + + +M ++ + + L
Sbjct: 353 CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECL 412
Query: 641 RFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
+R + +YN +I CK + A+ L EM + GL+P ++ + +++ L
Sbjct: 413 ELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
Query: 700 CS 701
S
Sbjct: 473 AS 474
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 113/270 (41%), Gaps = 2/270 (0%)
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGT 303
V++++ +++A L+ + G E L+ LC+ + A +L +
Sbjct: 187 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM 246
Query: 304 SLPLENAY-GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKD 362
P+ Y + G + G++ EA Q ++ GF P V Y L+ ++ D
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA-GFEPDIVDYTNLLSGYANAGKMAD 305
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
Y+LL DM PN ++ CK+ ++ A+++F ++ + + Y L+
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
C G + Y VL G P T+ + A ++ +E +L++ + + P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
+ Y+ + C+ G V++ + ++++
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEE 455
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 168/404 (41%), Gaps = 44/404 (10%)
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD---KVTARFSYAKMIMGF 526
++LD + F P+ + + ALC+ G V+D + D+ V R+ + ++ G+
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRY-FTSLLYGW 262
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHC 585
+ + A +LV+M E G+E Y ++L + + L +M G +P+
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
+ + I ++ + A +VF M+R + + ++ + + +I +D
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382
Query: 646 -IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR 704
I+ ++ S Y ++V K + + LEL +M ++ +P I Y V+++ C L
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442
Query: 705 YYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLI 764
EAV L N E+ G +SP V + + +I
Sbjct: 443 VKEAVRLWNEMEENG----------------LSPGV-----------------DTFVIMI 469
Query: 765 IG-AFSGCLRVSYSIQELEELIAKCFPVDIY-TYNLLMRK-LTHHDMDKACELFDRMCQR 821
G A GCL + S E + F V Y T LL+ L ++ A +++ + +
Sbjct: 470 NGLASQGCL-LEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSK 528
Query: 822 GL-EPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
G E N ++ + H + G + EA + EM++ F P +T
Sbjct: 529 GACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDT 572
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 179/455 (39%), Gaps = 43/455 (9%)
Query: 120 LKFFDWAGRQPRFYHTRTTFVAIFRILSCARL----RPLVFDFLRDFRSCSFPHRARYHD 175
L FF W+ H ++ IL ARL R L+ L + P + D
Sbjct: 97 LSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSL-----LNSPPDSDLVD 151
Query: 176 TLVVGYAIAGKPDIALHLL----GRMRFQGLDLDGF------GYH---ILLNSLAENNCY 222
+L+ Y I+ + LL ++R+ L D F G+ I LN+L +
Sbjct: 152 SLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSK 211
Query: 223 NAFDVIANQI--CM---RGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSE 277
+ D + +I C R Y + +T I+I+ LCK+GRL+E L+ + G
Sbjct: 212 SKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIV 271
Query: 278 LSFLIGVLCESNRFERAVELVSEFGTSLPLEN------AYGVWIRGLVQGGRLDEALEFF 331
+ L+ + E R E ++ L+ L ++N Y + + + G L A + F
Sbjct: 272 NTSLVFRVLEEMRIEESMSLLKR----LLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVF 327
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+ GF Y + + + +K+ LL +M E+ + P T N ++ F +
Sbjct: 328 DEML-QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
G + LE GL P+ A+ ++ ++ A +L S G+ PD T
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG----YLMR 507
+S L ID+ L R+ P + + LC G+VE G +M+
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMK 506
Query: 508 GDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEM 542
L + A Y +I F K A R+ EM
Sbjct: 507 KRLIEPNADI-YDALIKAFQKIGDKTNADRVYNEM 540
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 30/352 (8%)
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
DV++ L D T +++T+N ++ + K + D+ ++ + PN + + +I
Sbjct: 185 DVFKRLCDCGFTL---SVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMI 241
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
LC +G KE +L G P ++L + E +I+E LL L + +
Sbjct: 242 QVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMV 301
Query: 482 PNSSTYSRFVSALCRAG------RVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDI- 534
++ YS V A + G +V D L RG + S+ + + +GD+
Sbjct: 302 VDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRG-----FSANSFVYTVFVRVCCEKGDVK 356
Query: 535 -AARLLVEMKEKGYELKRSSYRHVLHCLLH------MDNPRTRFFNLLEMMTHG-KPHCD 586
A RLL EM+E G S Y +CL+ + + + M+T G P C
Sbjct: 357 EAERLLSEMEESGV----SPYDETFNCLIGGFARFGWEEKGLEYCEV--MVTRGLMPSCS 410
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
FN + + A E+ G + + + +++ + I AL+ F ++
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Query: 647 RH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
+ ++ +++ +IVGLC K + + M K + P+ + Y+ L++
Sbjct: 471 EYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIK 522
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 6/345 (1%)
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
D+ + L+D E +V V C+ K+ +++ ++F G + + + LI
Sbjct: 148 DLVDSLLDTYEISSSTPLVFDLLVQCY-AKIRYLELGFDVFKRLCDCGFTLSVITLNTLI 206
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
+R+ + +P+ T + LC+E ++ E+ DLLD +R +
Sbjct: 207 HYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCL 266
Query: 482 PNSSTYSRFVSALCRAGRVEDGY-LMRGDLDKVTARFSYAKMIMGFIKSNRGDI--AARL 538
P+ + V + R+E+ L++ L K + I+ + K+ GD+ A ++
Sbjct: 267 PSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKV 326
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMH 597
EM ++G+ Y + + + L EM G P+ + FN I G
Sbjct: 327 FDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFAR 386
Query: 598 ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN-DIRHQVVVSTKL 656
+ E E+M G+M + S+ ++KS + ++ A I V
Sbjct: 387 FGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHT 446
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
Y+ +I G + + D AL+L +EM ++P E + L+ LC+
Sbjct: 447 YSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCT 491
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 5/299 (1%)
Query: 209 YHILLNSLAENNCYNAFDVIANQICMRGYE-SHMTNVIVIKHLCKQGRLEEAEAHLNGLV 267
Y L SLA + Y + I Q+ + S T +I+ K G +++A NG+
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 268 GS-GKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRL 324
+ G + + L+ LC+ F A L+ P + Y + + G G++
Sbjct: 174 KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKM 233
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
EA EF + GF P ++LI LL L+ E++ M + P++ T N
Sbjct: 234 KEAQEFL-DEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNI 292
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ K G V+ +E++ + + GL + YK LI + G EA+R+L + G
Sbjct: 293 LIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+ P ++ + +CR D+ + + PN Y+ ++ R G+ D
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDA 411
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 147/377 (38%), Gaps = 23/377 (6%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRD 161
FV RVLR + L+FF+WA P + T + + + L+ + ++ L+
Sbjct: 79 FVFRVLRATSRSSN--DSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQ 136
Query: 162 FRSCSFPHRARYHDTLVVGYAIAGKPDIALHLL-GRMRFQGLDLDGFGYHILLNSLAENN 220
+ S ++ Y G D A+ L G + G Y+ LL++L +
Sbjct: 137 MKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVK 196
Query: 221 CYNAFDVIANQICMRGYESHM-TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
++ + ++ +G + T I++ C G+++EA+ L+ + G
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 280 FLIGVLCESNRFERAVELVSEF--GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
LI L + E A E+VS+ G +P + + I + + G ++ +E +
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMY------ 310
Query: 338 EGFVPCKV-------RYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
+ CK+ Y LI + + ++ + + LL + E P ++ C
Sbjct: 311 --YTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMC 368
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCP-KEAYRVLRSSSGTGYFPDR 449
+ GM D A F+ PN Y LI T+C G +A L + G P
Sbjct: 369 RNGMFDDAFSFFSDMKVKAHPPNRPVYTMLI-TMCGRGGKFVDAANYLVEMTEMGLVPIS 427
Query: 450 RTFSTLANALCRECKID 466
R F + + L K D
Sbjct: 428 RCFDMVTDGLKNGGKHD 444
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 116/309 (37%), Gaps = 6/309 (1%)
Query: 557 VLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI 616
VL N RFFN P + K + ++ + M+ +
Sbjct: 83 VLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSL 142
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQV--VVSTKLYNRMIVGLCKSDKADIAL 674
+ + +++ Y ++ + A+ FN + + + +YN ++ LC A
Sbjct: 143 DISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAY 202
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHS 734
L M++ GL P Y +LV CS + EA ++ + G + G LL
Sbjct: 203 ALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPA-RGRDLLIEG 261
Query: 735 MISPEVYHSCVDL--RREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVD 792
+++ S ++ + K G D ++I A S V + I+ VD
Sbjct: 262 LLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVD 321
Query: 793 IYTYNLLMRKLTH-HDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVH 851
I TY L+ ++ +D+A L + + G +P Y + G +G D+A +
Sbjct: 322 IDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFS 381
Query: 852 EMLKKGFNP 860
+M K P
Sbjct: 382 DMKVKAHPP 390
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 791 VDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRW 849
VD+Y N L+ L M A L RM ++GL+P++ TY ++ +G+ + G+ EA+ +
Sbjct: 182 VDVY--NSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEF 239
Query: 850 VHEMLKKGFNPPENTRNVI 868
+ EM ++GFNPP R+++
Sbjct: 240 LDEMSRRGFNPPARGRDLL 258
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 146/321 (45%), Gaps = 16/321 (4%)
Query: 194 LGRMRFQGLDLDGFG------YHILLNSLAENNCYN-AFDVIANQICMRGYESHMTNVIV 246
L +M+ + +D FG Y+IL++ +++ C++ A + + + + +T +
Sbjct: 134 LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTL 193
Query: 247 IKHLCKQGRLEEA---EAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE-FG 302
I LCK R++EA + + + G +H + LI LC+ A +L E +
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHI--YASLIKALCQIGELSFAFKLKDEAYE 251
Query: 303 TSLPLENA-YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLK 361
+ ++ A Y I L++ GR +E + ++ +G P V YN+LI EN +
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNE-VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
+L +M E + P++++ N +L F ++ + A LF + G SP+ ++Y+ +
Sbjct: 311 SANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVF 370
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
LC +EA +L GY P R LC K++ + ++ +L R
Sbjct: 371 DGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVIS-SLHRGIA 429
Query: 482 PNSSTYSRFVSALCRAGRVED 502
++ +S + +C+ + D
Sbjct: 430 GDADVWSVMIPTMCKEPVISD 450
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 152/361 (42%), Gaps = 8/361 (2%)
Query: 347 YNILIGRLLRENRLKDVYELLMDM-NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
Y+I+I +L ++ ++L+ + +T I P + V+ FF + + AL +F+
Sbjct: 50 YDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEM 109
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
Q+ + L+ L G ++ L S G PD T++ L + +
Sbjct: 110 PQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGK-PDACTYNILIHGCSQSGCF 168
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV----TARFSYAK 521
D+ L D ++++ P T+ + LC+ RV++ M+ D+ KV YA
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
+I + A +L E E ++ + Y ++ L+ L EM G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
KP +N I+G N + A V + M G+ + S +++ +FR ++ +A
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 641 RFFNDIRHQVVVSTKLYNRMIV-GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
F D+ + L R++ GLC+ + + A + EML G P + E +QKL
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Query: 700 C 700
C
Sbjct: 409 C 409
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 121/279 (43%), Gaps = 7/279 (2%)
Query: 287 ESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
E + + + + EFG P Y + I G Q G D+AL+ F + + P V
Sbjct: 133 ELEKMKERLSSIDEFGK--PDACTYNILIHGCSQSGCFDDALKLFDEMVKKK-VKPTGVT 189
Query: 347 YNILIGRLLRENRLKDVYELLMDMNET-CIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
+ LI L +++R+K+ ++ DM + + P + +++ C++G + A +L +
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
+ + + Y LI +L G E +L S G PD T++ L N C E
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKM 522
+ +LD +E+ P+ +Y+ + R + E+ + D+ + SY +
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
G + + + AA +L EM KGY+ +R L L
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 112/229 (48%), Gaps = 8/229 (3%)
Query: 638 DALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKV-GLNPSIECYEVL 695
DAL+ F+++ + V T + + +I GLCK + AL++ +MLKV G+ P++ Y L
Sbjct: 170 DALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASL 229
Query: 696 VQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL---LFHSMISPEVYHSCVDLRREKE 752
++ LC + A L + + ++ + + + L L + S EV S + ++
Sbjct: 230 IKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV--SMILEEMSEK 287
Query: 753 GEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTH-HDMDKA 811
G D+ ++I F + + L+E++ K D+ +YN+++ ++A
Sbjct: 288 GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEA 347
Query: 812 CELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
LF+ M +RG P+ +Y ++ G + +EA + EML KG+ P
Sbjct: 348 TYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 175/450 (38%), Gaps = 56/450 (12%)
Query: 236 GYESHMTNVIVIKHLCKQGRLEEAEAHL-NGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G S T+ IV+ L K + + AE+ L + LV G +L L+ E + R
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 295 VELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRL 354
+ S F T L+ + A + F Q +D GF+P N + L
Sbjct: 171 FD--SLFKTFAHLK--------------KFRNATDTFMQMKDY-GFLPTVESCNAYMSSL 213
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L + R+ +M I PN T+N V+ +C+ G +D +EL + G
Sbjct: 214 LGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
++Y LI C G A ++ +G P+ TF+TL + CR K+ E +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNR 531
PN+ TY+ ++ + G E + D+ + +Y +I G K +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSF 591
AA+ + E+ ++ NL+ P+ F++
Sbjct: 394 TRKAAQFVKELDKE---------------------------NLV-------PNSSTFSAL 419
Query: 592 IDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQV 650
I G D E+++ M R+G N + +++ ++ R+ A + + +R +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 651 VVSTKLYNRMIVGLCKSDKADIALELCFEM 680
+ ++ +++ GL K + +L EM
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 120/300 (40%), Gaps = 25/300 (8%)
Query: 585 CD----IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
CD +F+S H K A + F M+ G + S M S R+ AL
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 641 RFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
RF+ ++R ++ + N ++ G C+S K D +EL +M ++G + Y L+
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFL--- 756
C A+ L N+ K+G NV+ F+++I + C ++ ++ +
Sbjct: 284 CEKGLLSSALKLKNMMGKSG-----LQPNVVTFNTLI----HGFCRAMKLQEASKVFGEM 334
Query: 757 -------DSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDM 808
++ +I +S + + E+++ DI TYN L+ L
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
KA + + + L PN T+ + G D M++ G +P E T N++
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 49/340 (14%)
Query: 563 HMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNAS 621
H+ R ++M +G P + N+++ + + D+A + M+R I N
Sbjct: 180 HLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPY 239
Query: 622 SQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEM 680
+ +VM Y RS ++ + D+ +T + YN +I G C+ AL+L M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 681 LKVGLNPSIECYEVLVQKLCSLKRYYEA---------VN----------LVNVYEKAGRR 721
K GL P++ + L+ C + EA VN L+N Y + G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 722 LTSF-----------LGNVLLFHSMISPEVYHSCVDLRREKEGEF---LDSSMLTLIIGA 767
+F ++L ++++I + C + K +F LD L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALI----FGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 768 FSG-----CLR--VSYSIQELEELI-AKCFPVDIYTYNLLMRKL-THHDMDKACELFDRM 818
FS C+R + + +I + C P + T+N+L+ + D D A ++ M
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNE-QTFNMLVSAFCRNEDFDGASQVLREM 474
Query: 819 CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+R + + T + +G + G+ K+ + EM K F
Sbjct: 475 VRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 120/333 (36%), Gaps = 37/333 (11%)
Query: 154 LVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILL 213
+ F R+ R C + ++ GY +GK D + LL M G Y
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY---- 276
Query: 214 NSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
N ++ H C++G L A N + SG +
Sbjct: 277 -----------------------------NTLIAGH-CEKGLLSSALKLKNMMGKSGLQP 306
Query: 274 HRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFF 331
+ + LI C + + + A ++ E P Y I G Q G + A F+
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+ G + YN LI L ++ + + + + ++++ + PN T +A++ C
Sbjct: 367 -EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
D EL+ S + G PN + L+ C + A +VLR D RT
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
+ N L + K + LL ++F+ S
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 175/450 (38%), Gaps = 56/450 (12%)
Query: 236 GYESHMTNVIVIKHLCKQGRLEEAEAHL-NGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G S T+ IV+ L K + + AE+ L + LV G +L L+ E + R
Sbjct: 111 GSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV 170
Query: 295 VELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRL 354
+ S F T L+ + A + F Q +D GF+P N + L
Sbjct: 171 FD--SLFKTFAHLK--------------KFRNATDTFMQMKDY-GFLPTVESCNAYMSSL 213
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L + R+ +M I PN T+N V+ +C+ G +D +EL + G
Sbjct: 214 LGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD 273
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
++Y LI C G A ++ +G P+ TF+TL + CR K+ E +
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNR 531
PN+ TY+ ++ + G E + D+ + +Y +I G K +
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSF 591
AA+ + E+ ++ NL+ P+ F++
Sbjct: 394 TRKAAQFVKELDKE---------------------------NLV-------PNSSTFSAL 419
Query: 592 IDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQV 650
I G D E+++ M R+G N + +++ ++ R+ A + + +R +
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 651 VVSTKLYNRMIVGLCKSDKADIALELCFEM 680
+ ++ +++ GL K + +L EM
Sbjct: 480 PLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 120/300 (40%), Gaps = 25/300 (8%)
Query: 585 CD----IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
CD +F+S H K A + F M+ G + S M S R+ AL
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 641 RFFNDIRH-QVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
RF+ ++R ++ + N ++ G C+S K D +EL +M ++G + Y L+
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 700 CSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFL--- 756
C A+ L N+ K+G NV+ F+++I + C ++ ++ +
Sbjct: 284 CEKGLLSSALKLKNMMGKSG-----LQPNVVTFNTLI----HGFCRAMKLQEASKVFGEM 334
Query: 757 -------DSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDM 808
++ +I +S + + E+++ DI TYN L+ L
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
KA + + + L PN T+ + G D M++ G +P E T N++
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML 454
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 49/340 (14%)
Query: 563 HMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNAS 621
H+ R ++M +G P + N+++ + + D+A + M+R I N
Sbjct: 180 HLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPY 239
Query: 622 SQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEM 680
+ +VM Y RS ++ + D+ +T + YN +I G C+ AL+L M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 681 LKVGLNPSIECYEVLVQKLCSLKRYYEA---------VN----------LVNVYEKAGRR 721
K GL P++ + L+ C + EA VN L+N Y + G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 722 LTSF-----------LGNVLLFHSMISPEVYHSCVDLRREKEGEF---LDSSMLTLIIGA 767
+F ++L ++++I + C + K +F LD L
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALI----FGLCKQAKTRKAAQFVKELDKENLVPNSST 415
Query: 768 FSG-----CLR--VSYSIQELEELI-AKCFPVDIYTYNLLMRKL-THHDMDKACELFDRM 818
FS C+R + + +I + C P + T+N+L+ + D D A ++ M
Sbjct: 416 FSALIMGQCVRKNADRGFELYKSMIRSGCHPNE-QTFNMLVSAFCRNEDFDGASQVLREM 474
Query: 819 CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
+R + + T + +G + G+ K+ + EM K F
Sbjct: 475 VRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 120/333 (36%), Gaps = 37/333 (11%)
Query: 154 LVFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILL 213
+ F R+ R C + ++ GY +GK D + LL M G Y
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSY---- 276
Query: 214 NSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKEL 273
N ++ H C++G L A N + SG +
Sbjct: 277 -----------------------------NTLIAGH-CEKGLLSSALKLKNMMGKSGLQP 306
Query: 274 HRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFF 331
+ + LI C + + + A ++ E P Y I G Q G + A F+
Sbjct: 307 NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFY 366
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+ G + YN LI L ++ + + + + ++++ + PN T +A++ C
Sbjct: 367 -EDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
D EL+ S + G PN + L+ C + A +VLR D RT
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
+ N L + K + LL ++F+ S
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 135/297 (45%), Gaps = 13/297 (4%)
Query: 572 FNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
F+ ++ + GKP+ ++N+ ++G + + D A ++ M + + + +++ Y
Sbjct: 180 FDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYC 239
Query: 632 RSRRISDALRFFNDIRHQV----VVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
RS + AL F +++ + VVS +N +I G S K + +++ +EM+++G
Sbjct: 240 RSSKFDLALDLFREMKEKGCEPNVVS---FNTLIRGFLSSGKIEEGVKMAYEMIELGCRF 296
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLV-NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD 746
S E+LV LC R +A LV ++ K R L S L + ++
Sbjct: 297 SEATCEILVDGLCREGRVDDACGLVLDLLNK--RVLPSEFDYGSLVEKLCGENKAVRAME 354
Query: 747 LRRE--KEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLT 804
+ E K+G+ T ++ R + +E+++ D T+NLL+R L
Sbjct: 355 MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLC 414
Query: 805 HHDMDK-ACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
D A L +G EP+ TY ++ GF+ GR+ E + V+EML K P
Sbjct: 415 SSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 49/376 (13%)
Query: 440 SSGTGYFPD-RRTFSTLANALCRECKIDEMWDLLDFALERRFM---PNSSTYSRFVSALC 495
SSG P+ F + +A CR K+D + LL F +R + PN Y+ V+
Sbjct: 147 SSGIFSCPELEPIFRSAIDAYCRARKMD--YALLAFDTMKRLIDGKPNVGVYNTVVNGYV 204
Query: 496 RAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRS 552
++G ++ + K A+ ++ +I G+ +S++ D+A L EMKEKG E
Sbjct: 205 KSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCE---- 260
Query: 553 SYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANK-PDLAREVFELM 611
P+ FN+ I G + + K + + +E++
Sbjct: 261 ------------------------------PNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 612 QRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKA 670
+ + A+ +ILV R R+ DA D+ ++ V+ ++ Y ++ LC +KA
Sbjct: 291 ELGCRFSEATCEILV-DGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKA 349
Query: 671 DIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVL 730
A+E+ E+ K G P LV+ L R +A + AG S N+L
Sbjct: 350 VRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLL 409
Query: 731 LFHSMISPEVYHSCVDLR--REKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKC 788
L + S + LR +G D + +++ F+ R + E++ K
Sbjct: 410 L-RDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKD 468
Query: 789 FPVDIYTYNLLMRKLT 804
DI+TYN LM L+
Sbjct: 469 MLPDIFTYNRLMDGLS 484
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 130/329 (39%), Gaps = 39/329 (11%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++T+V GY +G D AL RM + D ++IL+N ++ ++ + ++
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 234 MRGYESHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
+G E ++ + +I+ G++EE ++ G + L+ LC R +
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 293 RAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
A LV + LP E YG + L + A+E + +G PC + L
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELW-KKGQTPCFIACTTL 374
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ L + R + + M MNA G+
Sbjct: 375 VEGLRKSGRTEKASGFMEKM-----------MNA------------------------GI 399
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
P+ + + L+ LC +A R+ +S GY PD T+ L + +E + E
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAGR 499
L++ L++ +P+ TY+R + L G+
Sbjct: 460 LVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 121/294 (41%), Gaps = 7/294 (2%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P Y + G V+ G +D+AL F+ Q+ E P +NILI R ++ +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFY-QRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
L +M E PN+V+ N ++ F G ++ +++ + G + + L+ LC
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLC 309
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
+G +A ++ P + +L LC E K ++++ ++ P
Sbjct: 310 REGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFI 369
Query: 486 TYSRFVSALCRAGRVE--DGYLMR-GDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEM 542
+ V L ++GR E G++ + + + ++ ++ S+ A RL +
Sbjct: 370 ACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLA 429
Query: 543 KEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIF--NSFIDG 594
KGYE ++Y HVL + R L+ M DIF N +DG
Sbjct: 430 SSKGYEPDETTY-HVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDG 482
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 5/244 (2%)
Query: 307 LENAYGVWIRGLVQGGRLDEAL-EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
LE + I + ++D AL F KR +G P YN ++ ++ +
Sbjct: 156 LEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALR 214
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
M + P++ T N ++ +C+ D+AL+LF + G PN +++ LI
Sbjct: 215 FYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFL 274
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
G +E ++ G T L + LCRE ++D+ L+ L +R +P+
Sbjct: 275 SSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF 334
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEM 542
Y V LC + M +L K + ++ G KS R + A+ + +M
Sbjct: 335 DYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 543 KEKG 546
G
Sbjct: 395 MNAG 398
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 26/396 (6%)
Query: 119 CLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLV 178
+FF WA + F H T+ ++ IL+ R + L + + + +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETF-TIAM 236
Query: 179 VGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE 238
+A A + A+ + M+ + + LL+SL V+ +++ R
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 296
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
+ MT +++ C+ L EA N ++ G + + ++ L S + A++L
Sbjct: 297 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 356
Query: 299 SEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR 356
+ P N +Y + IR + ++ A+E+F DS G P Y LI
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGT 415
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN--- 413
+ +L VYELL +M E PP+ T NA++ M + ++N Q + P+
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 414 --------YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
++A Y + WD K+ G PD +++ L L E K
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKK-----------GICPDDNSYTVLIRGLISEGKS 524
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
E L+ L++ Y++F + R G+ E
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/402 (18%), Positives = 167/402 (41%), Gaps = 41/402 (10%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
++ +L ++ +FE V ++ E GT L +E + + ++ +A+ F + +
Sbjct: 201 MMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAVGIFELMKKYK 259
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
+ + N L+ L R K+ ++L D + PNM+T +L +C++ + A
Sbjct: 260 FKIGVET-INCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 317
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
++N GL P+ +A+ ++ L +A ++ G P+ R+++ +
Sbjct: 318 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS 518
C++ ++ + D ++ P+++ Y+ C
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYT------C----------------------- 408
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR--TRFFNLLE 576
+I GF + D LL EM+EKG+ +Y ++ + + P TR +N +
Sbjct: 409 ---LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM- 464
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
+ +P FN + A ++ R V++ M + GI + +S ++++ +
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 637 SDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELC 677
+A R+ ++ + + + + YN+ + + +I EL
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELA 566
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 141/331 (42%), Gaps = 12/331 (3%)
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLA 604
+G+ +Y ++ L T L EM T G + F + A + A
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 605 REVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGL 664
+FELM++ + ++ S R++ +A F+ ++ + + Y ++ G
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 308
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG----- 719
C+ A + +M+ GL P I + V+++ L + +A+ L +V + G
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 720 RRLTSFLGNVLLFHSM-ISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSI 778
R T + + SM + E + VD G D+++ T +I F ++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVD-----SGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 779 QELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGF 837
+ L+E+ K P D TYN L++ + + M + ++++M Q +EP+ T+ ++ +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 838 SNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ + EM+KKG P +N+ V+
Sbjct: 484 FVARNYEMGRAVWDEMIKKGICPDDNSYTVL 514
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 169/413 (40%), Gaps = 27/413 (6%)
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
A+ E K+D DL+ LER + F A R G A
Sbjct: 149 EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAH-------------AS 195
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
+Y M+ K+ + + +L EM KG L ++ + R + + E
Sbjct: 196 RTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKE-RKKAVGIFE 253
Query: 577 MMTHGK--PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
+M K + N +D A A+ +F+ ++ N + +++ + R R
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVR 312
Query: 635 RISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
+ +A R +ND I H + +N M+ GL +S K A++L M G P++ Y
Sbjct: 313 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL--FHSMISPEVYHSCVDLRREK 751
++++ C A+ + +G + + + L+ F + + + + +EK
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK---LTHHDM 808
G D +I + + + ++I I+T+N++M+ +++M
Sbjct: 433 -GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPP 861
+A ++D M ++G+ P+ +Y ++ G + G+ EA R++ EML KG P
Sbjct: 492 GRA--VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 12/314 (3%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
E F P + Y +L+ R L + + DM + + P++V N +L +
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A++LF+ G PN +Y +I C + A +G PD ++ L
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--DKVTA 515
+ K+D +++LL E+ P+ TY+ + + E G + + +++
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 516 RFSYAKMIMG--FIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
MIM F+ N ++ + EM +KG +SY ++ L+ R
Sbjct: 472 SIHTFNMIMKSYFVARNY-EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 530
Query: 574 LLEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
L EM+ G P D +N F +P++ E+ + + +G A+++I +
Sbjct: 531 LEEMLDKGMKTPLID-YNKFAADFHRGGQPEIFEELAQRAKFSGKF--AAAEIFARWAQM 587
Query: 632 RSRRISDALRFFND 645
RR RF D
Sbjct: 588 TRRRCKQ--RFMED 599
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 26/396 (6%)
Query: 119 CLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLV 178
+FF WA + F H T+ ++ IL+ R + L + + + +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETF-TIAM 235
Query: 179 VGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE 238
+A A + A+ + M+ + + LL+SL V+ +++ R
Sbjct: 236 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 295
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
+ MT +++ C+ L EA N ++ G + + ++ L S + A++L
Sbjct: 296 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLF 355
Query: 299 SEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLR 356
+ P N +Y + IR + ++ A+E+F DS G P Y LI
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGT 414
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN--- 413
+ +L VYELL +M E PP+ T NA++ M + ++N Q + P+
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 414 --------YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
++A Y + WD K+ G PD +++ L L E K
Sbjct: 475 FNMIMKSYFVARNYEMGRAVWDEMIKK-----------GICPDDNSYTVLIRGLISEGKS 523
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
E L+ L++ Y++F + R G+ E
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 559
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 141/331 (42%), Gaps = 12/331 (3%)
Query: 545 KGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLA 604
+G+ +Y ++ L T L EM T G + F + A + A
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKA 247
Query: 605 REVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGL 664
+FELM++ + ++ S R++ +A F+ ++ + + Y ++ G
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 307
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG----- 719
C+ A + +M+ GL P I + V+++ L + +A+ L +V + G
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 720 RRLTSFLGNVLLFHSM-ISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSI 778
R T + + SM + E + VD G D+++ T +I F ++
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVD-----SGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 779 QELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNRWTYGLMAHGF 837
+ L+E+ K P D TYN L++ + + M + ++++M Q +EP+ T+ ++ +
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 838 SNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ + EM+KKG P +N+ V+
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVL 513
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/402 (18%), Positives = 167/402 (41%), Gaps = 41/402 (10%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
++ +L ++ +FE V ++ E GT L +E + + ++ +A+ F + +
Sbjct: 200 MMSILAKTRQFETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKAVGIFELMKKYK 258
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
+ + N L+ L R K+ ++L D + PNM+T +L +C++ + A
Sbjct: 259 FKIGVET-INCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEA 316
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
++N GL P+ +A+ ++ L +A ++ G P+ R+++ +
Sbjct: 317 ARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRD 376
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS 518
C++ ++ + D ++ P+++ Y+ C
Sbjct: 377 FCKQSSMETAIEYFDDMVDSGLQPDAAVYT------C----------------------- 407
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPR--TRFFNLLE 576
+I GF + D LL EM+EKG+ +Y ++ + + P TR +N +
Sbjct: 408 ---LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM- 463
Query: 577 MMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRI 636
+ +P FN + A ++ R V++ M + GI + +S ++++ +
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 637 SDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELC 677
+A R+ ++ + + + + YN+ + + +I EL
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELA 565
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 169/413 (40%), Gaps = 27/413 (6%)
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
A+ E K+D DL+ LER + F A R G D
Sbjct: 148 EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSR------------ 195
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE 576
+Y M+ K+ + + +L EM KG L ++ + R + + E
Sbjct: 196 -TYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKE-RKKAVGIFE 252
Query: 577 MMTHGK--PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSR 634
+M K + N +D A A+ +F+ ++ N + +++ + R R
Sbjct: 253 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVR 311
Query: 635 RISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYE 693
+ +A R +ND I H + +N M+ GL +S K A++L M G P++ Y
Sbjct: 312 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 694 VLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL--FHSMISPEVYHSCVDLRREK 751
++++ C A+ + +G + + + L+ F + + + + +EK
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 752 EGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRK---LTHHDM 808
G D +I + + + ++I I+T+N++M+ +++M
Sbjct: 432 -GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 490
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPP 861
+A ++D M ++G+ P+ +Y ++ G + G+ EA R++ EML KG P
Sbjct: 491 GRA--VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 125/314 (39%), Gaps = 12/314 (3%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
E F P + Y +L+ R L + + DM + + P++V N +L +
Sbjct: 291 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A++LF+ G PN +Y +I C + A +G PD ++ L
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--DKVTA 515
+ K+D +++LL E+ P+ TY+ + + E G + + +++
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 516 RFSYAKMIMG--FIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
MIM F+ N ++ + EM +KG +SY ++ L+ R
Sbjct: 471 SIHTFNMIMKSYFVARNY-EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 529
Query: 574 LLEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
L EM+ G P D +N F +P++ E+ + + +G A+++I +
Sbjct: 530 LEEMLDKGMKTPLID-YNKFAADFHRGGQPEIFEELAQRAKFSGKF--AAAEIFARWAQM 586
Query: 632 RSRRISDALRFFND 645
RR RF D
Sbjct: 587 TRRRCKQ--RFMED 598
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 114/559 (20%), Positives = 219/559 (39%), Gaps = 83/559 (14%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
+R Q G A E Q R +EGF N +G LL N + +++ +M+
Sbjct: 155 VRACTQNGDAQGAYEVIEQTR-AEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLG 213
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
N+ T N V+ FCK + AL +F Y
Sbjct: 214 YVENVNTFNLVIYSFCKESKLFEALSVF-------------------------------Y 242
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD--FALERRFM-PNSSTYSRFV 491
R+L+ G +P+ +F+ + + C+ + LL + F+ PN+ TY+ +
Sbjct: 243 RMLK----CGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVI 298
Query: 492 SALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
+ C+AGR++ +RGD+ K +Y ++ + ++ D A RL EM KG
Sbjct: 299 NGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV 358
Query: 549 LKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFI--DGAMHANKPDLARE 606
+ Y +++ L M+ ++L M D F I G A E
Sbjct: 359 VNTVIYNSIVY-WLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVE 417
Query: 607 VFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLC 665
+ ++ + +M + R ++++ A + + Q + + + +I G
Sbjct: 418 FQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYL 477
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSF 725
K K + ALE+ M+K+ ++ Y +V L A +VN E
Sbjct: 478 KEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME--------- 528
Query: 726 LGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELI 785
+ +++ ++++++ + V+ E + + S M Q+ E+
Sbjct: 529 IKDIVTYNTLLNESLKTGNVE-----EADDILSKMQK----------------QDGEK-- 565
Query: 786 AKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKD 844
V + T+N+++ L +KA E+ M +RG+ P+ TYG + FS H ++
Sbjct: 566 ----SVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQE 621
Query: 845 EAKRWVHEMLKKGFNPPEN 863
+ ++ +G P E+
Sbjct: 622 KVVELHDYLILQGVTPHEH 640
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 179/447 (40%), Gaps = 19/447 (4%)
Query: 278 LSFLIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKR 335
L+ +G L N +R ++ E + +EN + + I + +L EAL F +
Sbjct: 186 LNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRML 245
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM---NETCIPPNMVTMNAVLCFFCKL 392
G P V +N++I + ++ +LL M + + PN VT N+V+ FCK
Sbjct: 246 KC-GVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKA 304
Query: 393 GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTF 452
G +D+A + + G+ N Y L+ G EA R+ + G + +
Sbjct: 305 GRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIY 364
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
+++ L E I+ +L + + T + V LCR G V++ + + +
Sbjct: 365 NSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISE 424
Query: 513 ---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
V + ++ F++ + A ++L M +G L S+ ++ L +
Sbjct: 425 KKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK-EGKLE 483
Query: 570 RFFNLLEMMTHGKPHCD--IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVM 627
R + + M + I+NS ++G A V M+ I+T + ++
Sbjct: 484 RALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNT----LL 539
Query: 628 KSYFRSRRISDALRFFNDIRHQ---VVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
++ + +A + ++ Q VS +N MI LCK + A E+ M++ G
Sbjct: 540 NESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERG 599
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNL 711
+ P Y L+ + + V L
Sbjct: 600 VVPDSITYGTLITSFSKHRSQEKVVEL 626
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 42/344 (12%)
Query: 172 RYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSL-AENNCYNAFDVIAN 230
R + LV Y AG D AL L M +GL ++ Y+ ++ L E + A V+ +
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 231 QICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHR--SELSFLIGVLCES 288
T IV++ LC+ G ++EA E R SE + ++C +
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEA-----------VEFQRQISEKKLVEDIVCHN 435
Query: 289 ---NRFERAVELV-------SEFGTSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDS 337
+ F R +L S L L+ ++G I G ++ G+L+ ALE +
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY------ 489
Query: 338 EGFVPCK-----VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKL 392
+G + V YN ++ L + + E +++ E ++VT N +L K
Sbjct: 490 DGMIKMNKTSNLVIYNSIVNGLSKRG-MAGAAEAVVNAMEI---KDIVTYNTLLNESLKT 545
Query: 393 GMVDVALELFNS-RSQFG-LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
G V+ A ++ + + Q G S + + + +I LC G ++A VL+ G PD
Sbjct: 546 GNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSI 605
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
T+ TL + + +++ +L D+ + + P+ Y V L
Sbjct: 606 TYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPL 649
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 149/341 (43%), Gaps = 25/341 (7%)
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDV 227
P+ Y ++++ G+ AG+ D+A + G M G+D + Y L+++ +
Sbjct: 289 PNAVTY-NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 228 IANQICMRGYESHMTNVI----VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIG 283
+ +++ +G + N + ++ L +G +E A + L + ++ R + ++
Sbjct: 348 LCDEMTSKGL---VVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVR 404
Query: 284 VLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFV 341
LC + + AVE + +E+ + + V+ +L A + +G
Sbjct: 405 GLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSML-VQGLS 463
Query: 342 PCKVRYNILIGRLLRENRLK---DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
+ + LI L+E +L+ ++Y+ ++ MN+T N+V N+++ K GM A
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKT---SNLVIYNSIVNGLSKRGMAGAA 520
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL---RSSSGTGYFPDRRTFSTL 455
+ N+ + + Y L+ G +EA +L + G TF+ +
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVS-LVTFNIM 575
Query: 456 ANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCR 496
N LC+ ++ ++L F +ER +P+S TY +++ +
Sbjct: 576 INHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 162/419 (38%), Gaps = 11/419 (2%)
Query: 102 FVLRVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRD 161
V VL G G+ + + FFDWA R+P ++ I R L +L + D L+
Sbjct: 119 IVADVLNRGNLSGEAM--VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKG 176
Query: 162 FRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC 221
+ + A+ L G+ ++ LL L E +
Sbjct: 177 MVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSH 236
Query: 222 YNAFDVIANQICMRG---YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSEL 278
+A + N +G ++S N I+I K G +EE E L +V SG
Sbjct: 237 VSAAKSVFN--AKKGNIPFDSCSYN-IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY 293
Query: 279 SFLIGVLCESNRFERAVELVSEFG--TSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
S LI L + R +VE+ ++P N Y I + DE++ ++R+ D
Sbjct: 294 SHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLD 353
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
E P Y+ L+ L++ ++ D E+ +M + P + + L C G
Sbjct: 354 EE-CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPH 412
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A+ ++ + G + AYK L+ L G V +GY D + +
Sbjct: 413 AAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIV 472
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA 515
+ LC ++ +++ A+ + F PN YSR S L + + E Y + + K A
Sbjct: 473 DGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARA 531
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 327 ALEFFRQKRDSEGF-VPCKVR-YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
A+E F + SE F V C +N L+ R L E + + + + IP + + N
Sbjct: 205 AIELFEE---SESFGVKCSTESFNALL-RCLCERSHVSAAKSVFNAKKGNIPFDSCSYNI 260
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
++ + KLG V+ ++ + G P+ ++Y +LI L G ++ + + G
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG- 503
PD ++ + DE L+ PN TYS+ VS L + +V D
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 504 -----YLMRGDLDKVTARFSY-----------AKMIMGFIKSNRG-----DIAARLLV-- 540
L RG L S+ A M++ + KS + + A +LL+
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI-YQKSRKAGCRISESAYKLLLKR 439
Query: 541 ---------------EMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPH 584
EM+E GY Y +++ L + + + E M G P+
Sbjct: 440 LSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPN 499
Query: 585 CDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
+++ M +NK +LA ++F +++ NA S
Sbjct: 500 RFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARS 537
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 574 LLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
L EM+ G P C ++ I+G + + + E+F+ ++ G + +A+ ++ ++
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 633 SRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIEC 691
+R +++R++ + + + + Y++++ GL K K ALE+ EML G+ P+
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Query: 692 YEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL 731
++ LCS + A+ + KAG R++ +LL
Sbjct: 398 VTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL 437
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 234 MRGYESHMTNVI--VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
MRG + N + +++ G EEA + L G E + ++ L+ LC+ R
Sbjct: 147 MRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRV 206
Query: 292 ERAVELVSEFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
E+A ++ + + + P + + ++I G + R++EAL + Q+ GF PC + Y +
Sbjct: 207 EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEAL-WTIQEMKGHGFRPCVISYTTI 265
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I ++ VYE+L +M PPN +T ++ + AL + + G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSS-SGTGYFPDRRTFSTLANALCRECKIDEMW 469
P+ + Y LI TL G +EA RV R G + T++++ C + D+
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 470 DLL-DFALERRFMPNSSTYSRFV-SALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIM 524
+LL + P+ TY + S R VE G L++ + K +Y +I
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 525 GFIKSNRGDIAARLLVEM 542
++N + A L EM
Sbjct: 446 RLCRANMCEWAYCLFEEM 463
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 139/372 (37%), Gaps = 28/372 (7%)
Query: 506 MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
MRGD K+ + AK++ F + + A + + E G E S +L L
Sbjct: 147 MRGD--KLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEK 204
Query: 566 NPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQIL 625
LL++ +H P+ FN FI G AN+ + A + M+ +G S
Sbjct: 205 RVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 626 VMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVG 684
+++ Y + +++ + Y ++ L + + AL + M + G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLG---NVLLFHSMISPEVY 741
P Y L+ L R EA E+ R LG N ++SMI+ +
Sbjct: 325 CKPDSLFYNCLIHTLARAGRLEEA-------ERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 742 HSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE-------LEELIAK-CFPVDI 793
H D E E S++ + + LR + + L+E++ K +D
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE 437
Query: 794 YTYNLLMRKLTHHDMDKACE----LFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRW 849
TY L+++L +M CE LF+ M + + P T L+ + A+R
Sbjct: 438 STYTFLIQRLCRANM---CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Query: 850 VHEMLKKGFNPP 861
H M P
Sbjct: 495 EHIMKTVKLTAP 506
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 10/318 (3%)
Query: 234 MRGYESHMTNVI--VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
MRG + N + +++ G EEA + L G E + ++ L+ LC+ R
Sbjct: 147 MRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRV 206
Query: 292 ERAVELVSEFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
E+A ++ + + + P + + ++I G + R++EAL + Q+ GF PC + Y +
Sbjct: 207 EQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEAL-WTIQEMKGHGFRPCVISYTTI 265
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I ++ VYE+L +M PPN +T ++ + AL + + G
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSS-SGTGYFPDRRTFSTLANALCRECKIDEMW 469
P+ + Y LI TL G +EA RV R G + T++++ C + D+
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 470 DLL-DFALERRFMPNSSTYSRFV-SALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIM 524
+LL + P+ TY + S R VE G L++ + K +Y +I
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 525 GFIKSNRGDIAARLLVEM 542
++N + A L EM
Sbjct: 446 RLCRANMCEWAYCLFEEM 463
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 139/372 (37%), Gaps = 28/372 (7%)
Query: 506 MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
MRGD K+ + AK++ F + + A + + E G E S +L L
Sbjct: 147 MRGD--KLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEK 204
Query: 566 NPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQIL 625
LL++ +H P+ FN FI G AN+ + A + M+ +G S
Sbjct: 205 RVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTT 264
Query: 626 VMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEMLKVG 684
+++ Y + +++ + Y ++ L + + AL + M + G
Sbjct: 265 IIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSG 324
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLG---NVLLFHSMISPEVY 741
P Y L+ L R EA E+ R LG N ++SMI+ +
Sbjct: 325 CKPDSLFYNCLIHTLARAGRLEEA-------ERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 742 HSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE-------LEELIAK-CFPVDI 793
H D E E S++ + + LR + + L+E++ K +D
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE 437
Query: 794 YTYNLLMRKLTHHDMDKACE----LFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRW 849
TY L+++L +M CE LF+ M + + P T L+ + A+R
Sbjct: 438 STYTFLIQRLCRANM---CEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Query: 850 VHEMLKKGFNPP 861
H M P
Sbjct: 495 EHIMKTVKLTAP 506
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 10/252 (3%)
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M ++ I ++V A++ CK G A LF + G+ PN + Y +I + C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
+A ++LR PD TFS L NA +E K+ E ++ L P + TY+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 490 FVSALCRAGRVEDGYLMRGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMK 543
+ C+ RV+D M LD + ++ +++ +I G+ K+ R D + EM
Sbjct: 121 MIDGFCKQDRVDDAKRM---LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPD 602
+G +Y ++H + + L EM++ G P F+ + G +
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 603 LAREVFELMQRN 614
A + E +Q++
Sbjct: 238 KAFAILEDLQKS 249
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 318 LVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
L + G A F + + +G P + YN +I R D +LL M E I P
Sbjct: 20 LCKDGNHINAQNLFTEMHE-KGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINP 78
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
++VT +A++ F K V A E++ ++ + P + Y +I C +A R+L
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
S + G PD TFSTL N C+ ++D ++ R + N+ TY+ + C+
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 498 GRVE 501
G ++
Sbjct: 199 GDLD 202
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
++ RL ++ + L +M+E I PN++T N ++ FC G A +L +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
++P+ + + LI + EA + + FP T++++ + C++ ++D+
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 470 DLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGF 526
+LD + P+ T+S ++ C+A RV++G + ++ + V +Y +I GF
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 527 IKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
+ D A LL EM G ++ HC+L
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITF----HCML 227
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 3/230 (1%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSL 305
++ LCK G A+ + G + + +I C S R+ A +L+
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 306 --PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P + I V+ ++ EA E +++ F P + YN +I +++R+ D
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIF-PTTITYNSMIDGFCKQDRVDDA 134
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
+L M P++VT + ++ +CK VD +E+F + G+ N + Y LI
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
C G A +L G PD TF + LC + ++ + + +L+
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 112/270 (41%), Gaps = 38/270 (14%)
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG-YLMRGDLD 511
+ + + LC++ +L E+ PN TY+ + + C +GR D L+R ++
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 512 KVTAR--FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRT 569
K +++ +I F+K + A + EM L+ S +
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEM------LRWSIF--------------- 112
Query: 570 RFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
P +NS IDG ++ D A+ + + M G + + ++
Sbjct: 113 -------------PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLING 159
Query: 630 YFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
Y +++R+ + + F ++ R +V +T Y +I G C+ D A +L EM+ G+ P
Sbjct: 160 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKA 718
+ ++ LCS K +A ++ +K+
Sbjct: 220 YITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 646 IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
I+ VV+ST + +R LCK A L EM + G+ P++ Y ++ C R+
Sbjct: 6 IKADVVISTAIVDR----LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 706 YEAVNLV-NVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL- 763
+A L+ ++ EK +++ F ++I+ V V E E L S+
Sbjct: 62 SDADQLLRHMIEK------QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT 115
Query: 764 -----IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDR 817
+I F RV + + L+ + +K D+ T++ L+ +D E+F
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 818 MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
M +RG+ N TY + HGF G D A+ ++EM+ G P
Sbjct: 176 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/380 (19%), Positives = 155/380 (40%), Gaps = 41/380 (10%)
Query: 324 LDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMN 383
+D AL FR + ++P Y +L L + + L +M + ++ N
Sbjct: 185 VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244
Query: 384 A---VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS 440
A V+ + K ++VA F + G + Y L++ G P +A+ + S
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
T D T+ + +L + ++D + L ER+ P+ S +S V ++ +AGR+
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 501 EDGYLMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
+ + ++ R S + +I + K+ + D A RL EMK+ G+
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGF---------- 414
Query: 558 LHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+P+ ++ I+ + K ++A VF+ M++ G +
Sbjct: 415 ------------------------RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALEL 676
S+ +++ + S ++ A++ +N + + + Y ++ L D+A ++
Sbjct: 451 PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKI 510
Query: 677 CFEMLKVGLNPSIECYEVLV 696
EM +G + + +VL+
Sbjct: 511 LLEMKAMGYSVDVCASDVLM 530
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 145/345 (42%), Gaps = 17/345 (4%)
Query: 115 DILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFDFLRDFRS---CSF 167
++ + L F WA +QP + + +V +F L+ R ++ L + ++D S SF
Sbjct: 184 EVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSF 243
Query: 168 PHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGY-HILLNSLAENNCYNAFD 226
++ ++ A A K ++A + + G +D Y ++++ L + Y AF+
Sbjct: 244 ----NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 227 VIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLC 286
+ + T ++I L K GRL+ A + S S L+ +
Sbjct: 300 IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 287 ESNRFERAVELVSE---FGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
++ R + ++++ E FG P + I + G+LD AL + + + S GF P
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHR-PSATMFVSLIDSYAKAGKLDTALRLWDEMKKS-GFRPN 417
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
Y ++I + +L+ + DM + P T + +L G VD A++++N
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYN 477
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
S + GL P +Y L+ L A ++L GY D
Sbjct: 478 SMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 149/375 (39%), Gaps = 14/375 (3%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS--EFGT 303
VI++L K +LE A SG ++ + L+ + +A E+ E
Sbjct: 249 VIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTD 308
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
SL + Y + I L + GRLD A + F+Q ++ + P ++ L+ + + RL
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK-LRPSFSVFSSLVDSMGKAGRLDTS 367
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILT 423
++ M+M P+ +++ + K G +D AL L++ + G PN+ Y +I +
Sbjct: 368 MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIES 427
Query: 424 LCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
G + A V + G+ P T+S L ++D + + P
Sbjct: 428 HAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPG 487
Query: 484 SSTYSRFVSALC--RAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVE 541
S+Y ++ L R V L+ + + ++M +IK D+A + L
Sbjct: 488 LSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRF 547
Query: 542 MKEKGYELKRSSYRHVLHCLLH---MDNPRTRFFNLLEMMTH--GKPHCDIFNSFIDGAM 596
M G + R + + D+ R LLE + H GK ++ S + +
Sbjct: 548 MGSSGIKTNNFIIRQLFESCMKNGLYDSARP----LLETLVHSAGKVDLVLYTSILAHLV 603
Query: 597 HANKPDLAREVFELM 611
D R++ ++
Sbjct: 604 RCQDEDKERQLMSIL 618
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 22/277 (7%)
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFC 390
F +K + EGF P V YN L+ R RLK+ + L M + P++VT +++ C
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC 317
Query: 391 KLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR 450
K G V A + F+ G+ P+ M+Y LI C +G +++ ++L G PDR
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR---FVSALCRAGRVEDGYLMR 507
T + RE + + ++F +E R + + + +LC+ G+ + +
Sbjct: 378 TCKVIVEGFVREGR---LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGK---PFAAK 431
Query: 508 GDLDKVTAR-------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
LD++ +Y +I + + + A L ++K + L +YR ++ C
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491
Query: 561 LLHMDNPRTRFFNLLEMM-THGKPHCDIFNSFIDGAM 596
L + R + EM + KP +SFI GA+
Sbjct: 492 LCRIGRNREAESLMAEMFDSEVKP-----DSFICGAL 523
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 4/231 (1%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G P +NIL ++ ++V + L M E P++VT N ++ +C+ G + A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
L+ + + P+ + Y LI LC DG +EA++ G PD +++TL A
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLD--KVTAR 516
C+E + + LL L +P+ T V R GR+ +L KV
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVE--MKEKGYELKRSSYRHVLHCLLHMD 565
F ++ + AA+ L++ ++E+G+E K +Y +++ L D
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 197/487 (40%), Gaps = 65/487 (13%)
Query: 362 DVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
DV+ +L+ + C + V + ++ + KLG+V+ +F G S + + +L+
Sbjct: 150 DVFRVLVSATDEC-NWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLL 208
Query: 422 LTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
L ++ ++V G P+ TF+ L N C + E+ D L+ E F
Sbjct: 209 NGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFE 268
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARL 538
P+ TY+ VS+ CR GR+++ + + + + V +Y +I G K R A +
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT 328
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHA 598
M ++G KP C +N+ I
Sbjct: 329 FHRMVDRGI----------------------------------KPDCMSYNTLIYAYCKE 354
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLY 657
++++ M N ++ + + ++++ + R R+ A+ F ++R +V + ++
Sbjct: 355 GMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC 414
Query: 658 NRMIVGLCKSDKADIALELCFEMLKV-GLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
+ +IV LC+ K A L +++ G E Y L++ L EA+ L +
Sbjct: 415 DFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLK 474
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCV-DLRREKEGEFLDSSML-------TLIIGA- 767
+ L + L+ C+ + R +E E L + M + I GA
Sbjct: 475 NQNQVLDAKTYRALI-----------GCLCRIGRNREAESLMAEMFDSEVKPDSFICGAL 523
Query: 768 -FSGCLRVSYSIQE-LEELIAKCFPV-DIYTYNLLMRKL--THHDMDKACELFDRMCQRG 822
+ C + + E L L A F + D +YN L++ + T KA EL +RM + G
Sbjct: 524 VYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLG 583
Query: 823 LEPNRWT 829
PNR T
Sbjct: 584 FVPNRLT 590
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 194/489 (39%), Gaps = 50/489 (10%)
Query: 270 GKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALE 329
GK + L+ +L S +F A++ + E L++ E ++
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCE-----------------LIELTSKKEEVD 150
Query: 330 FFR---QKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
FR D + P V +++L+ L+ +++ + + ++ ++ ++VT N +L
Sbjct: 151 VFRVLVSATDECNWDP--VVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLL 208
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
KL +++ ++++ + G+ PN + L C D +E L G+
Sbjct: 209 NGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFE 268
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
PD T++TL ++ CR ++ E + L RR +P+ TY+ + LC+ GRV + +
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH-- 326
Query: 507 RGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
++ R SY +I + K + +LL EM R + + ++
Sbjct: 327 -QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Query: 561 LLHMDN--PRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFE-LMQRNGIM 617
+ F L + P ++ + I KP A+ + + +++ G
Sbjct: 386 FVREGRLLSAVNFVVELRRLKVDIPF-EVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHE 444
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALEL 676
+ +++S R I +AL +++Q V+ K Y +I LC+ + A L
Sbjct: 445 AKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESL 504
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
EM + P LV C ++KA R L+ F +F
Sbjct: 505 MAEMFDSEVKPDSFICGALVYGYCKELD----------FDKAERLLSLFAMEFRIF---- 550
Query: 737 SPEVYHSCV 745
PE Y+S V
Sbjct: 551 DPESYNSLV 559
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 7/311 (2%)
Query: 193 LLGRMRFQGLDLDGFGYHILLNSLAENN-CYNAFDVIANQICMRGYESHMTNVIVIKHLC 251
L +M +G + D Y+ L++S AF + R +T +IK LC
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC 317
Query: 252 KQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF--GTSLPLEN 309
K GR+ EA + +V G + + LI C+ +++ +L+ E + +P
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL-M 368
V + G V+ GRL A+ F + R + +P +V + LI L +E + LL
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV-CDFLIVSLCQEGKPFAAKHLLDR 436
Query: 369 DMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
+ E T N ++ + ++ AL L + Y+ LI LC G
Sbjct: 437 IIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD-FALERRFMPNSSTY 487
+EA ++ + PD L C+E D+ LL FA+E R + +Y
Sbjct: 497 RNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIF-DPESY 555
Query: 488 SRFVSALCRAG 498
+ V A+C G
Sbjct: 556 NSLVKAVCETG 566
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P F + A KPD A ++F M +G + +S ++ +S+R+ A
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 643 FNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSL 702
F +R + V T YN ++ G C + ALE+ EM++ G+NP++ Y + L
Sbjct: 184 FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM------L 237
Query: 703 KRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLT 762
K ++ A + + +E F M ++++ E +D T
Sbjct: 238 KGFFRAGQIRHAWE--------------FFLEM-------------KKRDCE-IDVVTYT 269
Query: 763 LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHD-MDKACELFDRMCQR 821
++ F + + +E+I + + TYN +++ L D ++ A +F+ M +R
Sbjct: 270 TVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329
Query: 822 GLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
G EPN TY ++ G + G + + M +G P T N++
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 6/307 (1%)
Query: 363 VYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
V+ L+ M I P+ T V + G D A++LF + + G + ++ ++
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
LC ++AY + R+ G + D T++ + N C + + ++L +ER P
Sbjct: 170 VLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARF---SYAKMIMGFIKSNRGDIAARLL 539
N +TY+ + RAG++ + ++ K +Y ++ GF + A +
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHA 598
EM +G ++Y ++ L DN EM+ G +P+ +N I G HA
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 599 NKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLY 657
+ E+ + M+ G N + ++++ Y + AL F + + + Y
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408
Query: 658 NRMIVGL 664
N +I G+
Sbjct: 409 NILISGM 415
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 2/186 (1%)
Query: 318 LVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPP 377
L + R+++A E FR R F V YN+++ R E+L +M E I P
Sbjct: 171 LCKSKRVEKAYELFRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
N+ T N +L F + G + A E F + + + Y ++ G K A V
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
G P T++ + LC++ ++ + + + R + PN +TY+ + L A
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 498 GRVEDG 503
G G
Sbjct: 349 GEFSRG 354
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 51/283 (18%)
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY-- 504
P +TF+ +A K D+ L E + ++++ + LC++ RVE Y
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 505 --LMRG--DLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+RG +D VT Y ++ G+ R A +L EM E+G ++Y +L
Sbjct: 184 FRALRGRFSVDTVT----YNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 561 LLHMDNPRTRFFNLLEMMTHGKPHCDI----FNSFIDGAMHANKPDLAREVFELMQRNGI 616
R + LEM K C+I + + + G A + AR VF+ M R G+
Sbjct: 240 FFRAGQIRHAWEFFLEM---KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 617 MTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
+ + ++ YN MI LCK D + A+ +
Sbjct: 297 LPSVAT----------------------------------YNAMIQVLCKKDNVENAVVM 322
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
EM++ G P++ Y VL++ L + L+ E G
Sbjct: 323 FEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 281 LIGVLCESNRFERAVELVSEFGTSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDSEG 339
++ VLC+S R E+A EL ++ Y V + G R +ALE ++ + G
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVE-RG 225
Query: 340 FVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
P YN ++ R +++ +E ++M + ++VT V+ F G + A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
+F+ + G+ P+ Y +I LC + A + GY P+ T++ L L
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 460 CRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+ +L+ PN TY+ + VE
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 124/343 (36%), Gaps = 43/343 (12%)
Query: 119 CLKFFDWAGRQPRFY-HTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTL 177
L+FF + R Y H ++F I + L P V+ + RS + +
Sbjct: 73 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIV 132
Query: 178 VVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN----CYNAF-------- 225
YA AGKPD A+ L M G D ++ +L+ L ++ Y F
Sbjct: 133 AERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS 192
Query: 226 -DVIANQICMRGY---ESHMTNVIVIKHLCKQG---RLEEAEAHLNGLVGSGKELHRSEL 278
D + + + G+ + + V+K + ++G L L G +G+ H E
Sbjct: 193 VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 279 SFL--------------------IGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGL 318
FL GV E R + + G LP Y I+ L
Sbjct: 253 -FLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV-LPSVATYNAMIQVL 310
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ ++ A+ F ++ G+ P YN+LI L EL+ M PN
Sbjct: 311 CKKDNVENAVVMF-EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLI 421
T N ++ ++ + V+ AL LF PN Y LI
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 328 LEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLC 387
+E FR+ G V V Y LI L + E+ +M +PP+++T N +L
Sbjct: 1 MELFRE-MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 388 FFCKLGMVDVAL---------ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
CK G ++ AL +LF S S G+ PN + Y +I C G +EAY + R
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
G PD T++TL A R+ +L+ RF ++STY V+ + G
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-LVTDMLHDG 178
Query: 499 RVEDGYL 505
R++ G+L
Sbjct: 179 RLDKGFL 185
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL--------- 360
Y I+GL Q G D A E F++ S+G P + YNIL+ L + +L
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPDIMTYNILLDGLCKNGKLEKALVAGKV 76
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+D ++L ++ + PN+VT ++ FCK G + A LF + G P+ Y L
Sbjct: 77 EDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL 459
I DG + +++ + D T+ + + L
Sbjct: 137 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 15/190 (7%)
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ELF SQ GL N + Y LI L G A + + G PD T++ L +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 459 LCRECK---------IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL---- 505
LC+ K +++ WDL + PN TY+ +S C+ G E+ Y
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 506 MRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
M+ D + +Y +I ++ +A L+ EM+ + S+Y V +LH
Sbjct: 121 MKED-GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDG 178
Query: 566 NPRTRFFNLL 575
F +L
Sbjct: 179 RLDKGFLEML 188
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 180/451 (39%), Gaps = 27/451 (5%)
Query: 281 LIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
LI VLC + + A+ + E S P + Y + I+G + R+D+A+ + + +
Sbjct: 295 LIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQ-YN 353
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
GFVP + YN L+ L+ ++ + +L M + + + T N ++ + G +
Sbjct: 354 GFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAG 413
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
LF + G + + + + L LC +G + A +++ G+ D T S+L
Sbjct: 414 FTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIG 473
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS 518
++ + D L+ E +PN ++ V A + + +D + ++ S
Sbjct: 474 FHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD----KDYTPMFPSKGS 529
Query: 519 YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLE-M 577
+ IM + S +A + M++ + S + L H N F L
Sbjct: 530 FLD-IMSMVGSEDDGASAEEVSPMEDDPW-----SSSPYMDQLAHQRNQPKPLFGLARGQ 583
Query: 578 MTHGKPH---CDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT------NASSQILVMK 628
KP D+ N+F+ + LA ++FE+ G+ N+ V K
Sbjct: 584 RVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKK 643
Query: 629 SYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
YF++ R F N + YN +I GL K +AD+A + + K G
Sbjct: 644 GYFQTARGVLDQMFENFCAADIAT----YNVIIQGLGKMGRADLASAVLDRLTKQGGYLD 699
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
I Y L+ L R EA L + + G
Sbjct: 700 IVMYNTLINALGKATRLDEATQLFDHMKSNG 730
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 175/458 (38%), Gaps = 60/458 (13%)
Query: 100 ETFVLRVLRHGGDDGDILSCLKFFDWA-GRQPRFYHTRTTFVAIFRILSCARLRPLVFDF 158
E VL++LR D L FF W +P + H+ T + IFR + L V D
Sbjct: 57 EPVVLQILRRNSIDPS--KKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDL 114
Query: 159 LRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAE 218
L + L+ +GK + AL +L M G L+ Y +L +L +
Sbjct: 115 LGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVK 174
Query: 219 NNCYNAFDVIANQICMRGYESHMTN----VIVIKHLCKQGRLEEAEAHLNGLVGSGKELH 274
+ I ++ + ++H + VI++ +L + E LVG +
Sbjct: 175 KHELRLALSILFKL-LEASDNHSDDDTGRVIIVSYLPGTVAVNEL------LVGLRRADM 227
Query: 275 RSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQK 334
RSE + L RF+ F T +Y + I G G LD AL F++
Sbjct: 228 RSEFKRVFEKLKGMKRFK--------FDTW-----SYNICIHGFGCWGDLDAALSLFKEM 274
Query: 335 RDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
++ VY + P++ T N+++ C G
Sbjct: 275 KERSS-----------------------VYG-------SSFGPDICTYNSLIHVLCLFGK 304
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
AL +++ G P+ Y+ LI C +A R+ G+ PD ++
Sbjct: 305 AKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNC 364
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK-- 512
L + + K+ E L + ++ + TY+ + L R GR E G+ + DL K
Sbjct: 365 LLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKG 424
Query: 513 -VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
+++ + + + + + A +L+ EM+ +G+ +
Sbjct: 425 QFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSV 462
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 168/413 (40%), Gaps = 37/413 (8%)
Query: 474 FALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--DKVTARFSYAKMIM-GFIKSN 530
++L + +++ YS+ +CR G + + + G + D V + AK+++ I+S
Sbjct: 82 YSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSG 141
Query: 531 RGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCD---- 586
+ + A +L M+E G L S Y VL L+ R L +++ H D
Sbjct: 142 KFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 587 --IFNSFIDGAMHAN-------KPDLARE---VFE-LMQRNGIMTNASSQILVMKSYFRS 633
I S++ G + N + D+ E VFE L + S + + +
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 634 RRISDALRFFNDIRHQVVVSTK-------LYNRMIVGLCKSDKADIALELCFEMLKVGLN 686
+ AL F +++ + V YN +I LC KA AL + E+ G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 687 PSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVD 746
P Y +L+Q C R +A+ + + G + + N LL ++ + +V +C
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEAC-Q 380
Query: 747 LRREKEGEFLDSSMLT---LIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL 803
L + E + +S T LI G F R +L K VD T++++ +L
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNG-RAEAGFTLFCDLKKKGQFVDAITFSIVGLQL 439
Query: 804 THH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK 855
++ A +L + M RG + T + GF GR D W +++K
Sbjct: 440 CREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD----WKEKLMK 488
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 185/461 (40%), Gaps = 68/461 (14%)
Query: 408 FGLSPNY----MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
+ L P Y AY + T+C G E +L S G D+ L ++L R
Sbjct: 82 YSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSG 141
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--------DKVTA 515
K + +LD+ E N S Y + AL + + + L D T
Sbjct: 142 KFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 516 RFSYAKMIMGFIKSN-------RGDIAA---RLLVEMKE-KGYELKRSSYRHVLH---CL 561
R + G + N R D+ + R+ ++K K ++ SY +H C
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 562 LHMDNPRTRFFNLLEMMT-HGK---PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+D + F + E + +G P +NS I K A V++ ++ +G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALEL 676
+ S+ ++++ +S R+ DA+R + ++++ V T +YN ++ G K+ K A +L
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQL 381
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
+M++ G+ S Y +L+ L + GR F LF
Sbjct: 382 FEKMVQEGVRASCWTYNILIDGLF----------------RNGRAEAGF----TLF---- 417
Query: 737 SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTY 796
DL+ K+G+F+D+ +++ ++ +++ +EE+ + F VD+ T
Sbjct: 418 --------CDLK--KKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 797 -NLLMRKLTHHDMDKACELFDRMCQRGLEPN--RWTYGLMA 834
+LL+ D +L + + L PN RW G+ A
Sbjct: 468 SSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEA 508
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 12/334 (3%)
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
N+ TM VL + + D AL + +F + + +AY +I G A ++
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
+ G +PD T++++ N C KID+ W L + + NS TYSR + +C++
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 498 GRVEDGYLMRGDLDKVTA-------RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELK 550
G +E + +++K +Y +I F + R + A +L M +G
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Query: 551 RSSYRHVLHCLLHMDNPRTRFFNLLEMMTH--GKPHCDIFNSFIDGAMHANKPDLAREVF 608
R + ++ +L D L++ + G + F+S + + + A ++F
Sbjct: 309 RVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIF 368
Query: 609 ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVST---KLYNRMIVGLC 665
LM G+ + + V + R D + +I + V ST ++ +++GLC
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Query: 666 KSDKADIALELCFEMLKVGLNPSIECYEVLVQKL 699
+ + A +L ML + + E +++ L
Sbjct: 429 QQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 111/297 (37%), Gaps = 46/297 (15%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
AY + IR G L+ A + ++ D G P + Y +I ++ D + L +
Sbjct: 167 AYNLVIRLFADKGDLNIA-DMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKE 225
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG----LSPNYMAYKYLILTLC 425
M++ N VT + +L CK G ++ ALEL + +SPN + Y +I C
Sbjct: 226 MSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFC 285
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRT---------------------------------- 451
+EA VL G P+R T
Sbjct: 286 EKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLS 345
Query: 452 --FSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
FS+ +L R + +E + L R P+ S LC R D +L+ +
Sbjct: 346 ECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQE 405
Query: 510 LDKVTARFS-----YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
++K + + +A +++G + AA+L M +K LK S ++ L
Sbjct: 406 IEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 281 LIGVLCESNRFERAVELVSEFG----TSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
++ VL + F+ ELV+E + L + +R L + G+ ++A++ F +
Sbjct: 172 MVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEK 231
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
S G + N L+ L++EN ++ +E+ + + +T I P+ T N ++ FCK D
Sbjct: 232 SYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFD 290
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A + + +P+ + Y + C +G + +L G P+ T++ +
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
++L + ++ E + + E +P++ YS + L + GR +D + D+ R
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
Y MI + +R ++A RLL M+++ E
Sbjct: 411 RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 20/390 (5%)
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELL--MDMNETCIPPNMVTM 382
++A FF G+V YN ++ L + ++EL+ M+ NE + TM
Sbjct: 147 NQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTM 206
Query: 383 NAVLCFFCKLGMVDVALELF-NSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
+ V+ K G + A++ F +G+ + +A L+ L + + A+ V
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
T PD RTF+ L + C+ K D+ ++D F P+ TY+ FV A C+ G
Sbjct: 267 DT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 502 DGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
M ++ + +Y ++ KS + A + +MKE G Y ++
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 559 HCLLHMDNPRTRFFN---LLEMMTHGKPHCD--IFNSFIDGAMHANKPDLAREVFELMQ- 612
H L + RF + + E MT+ D ++N+ I A+H ++ ++A + + M+
Sbjct: 386 HIL----SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 613 RNGIMTNASSQI---LVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDK 669
G + + + L+ + + + + +++ V + Y +I GLC S K
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKL 699
+ A E ++ G+ P ++LV +L
Sbjct: 502 VEEACLFFEEAVRKGMVPRDSTCKMLVDEL 531
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 170/409 (41%), Gaps = 59/409 (14%)
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
++S TGY T++ + + L + D MW+L++ N + S+ V+
Sbjct: 156 ANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-------NKNEESKLVT------ 202
Query: 499 RVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSY--RH 556
LD + +K++ KS + + A +EM EK Y +K +
Sbjct: 203 -----------LD------TMSKVMRRLAKSGKYNKAVDAFLEM-EKSYGVKTDTIAMNS 244
Query: 557 VLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGI 616
++ L+ ++ L++ KP FN I G A K D AR + +LM+
Sbjct: 245 LMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEF 304
Query: 617 MTNASSQILVMKSYFRS---RRISDALRFF--NDIRHQVVVSTKLYNRMIVGLCKSDKAD 671
+ + +++Y + RR+++ L N VV Y ++ L KS +
Sbjct: 305 TPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT----YTIVMHSLGKSKQVA 360
Query: 672 IALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLL 731
AL + +M + G P + Y L+ L R+ +A + G R +VL+
Sbjct: 361 EALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR-----RDVLV 415
Query: 732 FHSMISPEVYHSCVD-----LRR--EKEGEFLDSSMLT---LIIGAFSGCLRVSYSIQEL 781
+++MIS ++HS + L+R ++EGE ++ T L+ I L
Sbjct: 416 YNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGIL-L 474
Query: 782 EELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWT 829
++ +D+ TY LL+R L +++AC F+ ++G+ P T
Sbjct: 475 HHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST 523
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 13/296 (4%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P NA+ + + L + G + E R+ R P +N+L R K +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMR--HRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN---SRSQFGLSPNYMAYKYLIL 422
LL +M E P T A + FC+ GMVD A +LF+ ++ +P + +I+
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
L + +E + ++ TG PD T+ + +C K+DE + LD + + P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARF-----SYAKMIMGFIKSNRGDIAAR 537
+ TY+ F+ LC + ++ + G + V +R +Y +I F + + D A
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRM--VESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFI 592
EM ++ +Y +++ L + F L E++ G K +F+SF+
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 109/275 (39%), Gaps = 18/275 (6%)
Query: 377 PNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRV 436
P + N +L CK G+V L R + + P+ + L C PK+A ++
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLR-RMRHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 437 LRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR---FMPNSSTYSRFVSA 493
L G+ P+ T+ + C+ +DE DL DF + + P + T++ + A
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 494 LCRAGRVEDGY------LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGY 547
L + + E+ + + G L V+ +Y +I G + + D A + L EM KGY
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVS---TYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 548 ELKRSSYRHVLHCLLHMDNPRT-RFFNLLEMMTHGK--PHCDIFNSFIDGAMHANKPDLA 604
+Y L L +N +T L M + P +N I + PD A
Sbjct: 408 PPDIVTYNCFLRVLC--ENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 605 REVFELMQRNGIMTNASSQILVMKSYFRSRRISDA 639
+ M + + + + ++ F R +A
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 500
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 146/410 (35%), Gaps = 51/410 (12%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM-------NETCIPPNM 379
A FF E + + YN +I L + +++DM N+T + ++
Sbjct: 142 AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDV 201
Query: 380 VTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRS 439
+ +L +C+ + V R + P A+ L+ LC G KE +LR
Sbjct: 202 LL--EILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRR 259
Query: 440 SSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
PD TF+ L CR + LL+ +E P + TY + C+AG
Sbjct: 260 MRHRVK-PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGM 318
Query: 500 VE------DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
V+ D + +G ++A MI+ K+++ + L+ M G
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTG------- 371
Query: 554 YRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
CL P + I+G A K D A + + M
Sbjct: 372 ------CL---------------------PDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 614 NGIMTNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADI 672
G + + ++ +R+ +AL+ + + + S + YN +I + D D
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 673 ALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRL 722
A EM K +E Y ++ L R EA L+ G +L
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 113/293 (38%), Gaps = 38/293 (12%)
Query: 574 LLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR 632
LL M H KP + FN G P A ++ E M G + + ++ +
Sbjct: 256 LLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQ 315
Query: 633 SRRISDALRFFN-DIRHQVVVST---KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ + +A F+ I VS K + MIV L K+DKA+ EL M+ G P
Sbjct: 316 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLR 748
+ Y+ +++ +C ++ EA ++ G + +++ ++ + + D
Sbjct: 376 VSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG-----YPPDIVTYNCFLRVLCENRKTDEA 430
Query: 749 REKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM 808
+ G ++S R + S+Q LI+ F +D D
Sbjct: 431 LKLYGRMVES--------------RCAPSVQTYNMLISMFFEMD--------------DP 462
Query: 809 DKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPP 861
D A + M +R + TY M +G + R EA + E++ KG P
Sbjct: 463 DGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 193/505 (38%), Gaps = 46/505 (9%)
Query: 119 CLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLV 178
L FF+WA +QP + H ++ +IF+ LS +R + + +S + + +L+
Sbjct: 65 ALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLI 124
Query: 179 VGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE 238
+ K A +L G ++ + LL L + CY+ + ++ +G
Sbjct: 125 DTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVS 184
Query: 239 SHMTNV-IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLI-GVLCESNRFERAVE 296
+ + I C+ + ++ + + ++ S ++ LI LC+ +R A
Sbjct: 185 LNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFY 244
Query: 297 LVSEFGT--SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRL 354
++ E P AY V V G L E ++KR G P Y I L
Sbjct: 245 ILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL-GVAPRSSDYRAFILDL 303
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+ RL + E+ + P + ++A++ + VD
Sbjct: 304 ISAKRLTEAKEVAEVIVSGKFPMDNDILDALI---GSVSAVD------------------ 342
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
P A L TG P RT S L+ LCR K D + +
Sbjct: 343 ---------------PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL 387
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK--VTARFS-YAKMIMGFIKSNR 531
+ + +YS +S LC+AGRV + Y ++ K + S Y +I K+
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEM 447
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNS 590
A +L EM +G ++ ++Y ++ L +M+ G +P I+ S
Sbjct: 448 IRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMS 507
Query: 591 FIDGAMHANKPDLAREVF-ELMQRN 614
I+G K + A EVF + M+R+
Sbjct: 508 LIEGLCKETKIEAAMEVFRKCMERD 532
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
++G + D A+E M+ G P+I L + LC R+ ++ +L+ YE
Sbjct: 334 LIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLC---RHDKSDHLIKAYELLSS 390
Query: 721 RLTSFLGNVLLFHSMIS--------PEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCL 772
+ + + + MIS E Y + +++ KEG D S+ +I A
Sbjct: 391 K--GYFSELQSYSLMISFLCKAGRVRESYTALQEMK--KEGLAPDVSLYNALIEACCKAE 446
Query: 773 RVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYG 831
+ + + +E+ + +++ TYN+L+RKL+ + +++ LFD+M +RG+EP+ Y
Sbjct: 447 MIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYM 506
Query: 832 LMAHGFSNHGRKDEA 846
+ G + + A
Sbjct: 507 SLIEGLCKETKIEAA 521
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 90/491 (18%), Positives = 185/491 (37%), Gaps = 49/491 (9%)
Query: 201 GLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVI---VIKHLCKQGRLE 257
G D YH + SL+ + ++A D + Q+ + + + + + +I L + +
Sbjct: 77 GYSHDSISYHSIFKSLSLSRQFSAMDALFKQV--KSNKILLDSSVYRSLIDTLVLGRKAQ 134
Query: 258 EAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF---GTSLPLENAYGVW 314
A L +G+E+H + L+ L ++ A +L + G SL +GV+
Sbjct: 135 SAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLN-TLGFGVY 193
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
I + ++ L + + + + + +++ L + +R D + +L ++
Sbjct: 194 IGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNID 253
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
P+ + + F G + + + + G++P Y+ IL L EA
Sbjct: 254 CKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAK 313
Query: 435 RVLRSSSGTGYFP-DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSA 493
V +G FP D L ++ D + L + + +P T S+
Sbjct: 314 EVAEVIV-SGKFPMDNDILDALIGSVS-AVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKN 371
Query: 494 LCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSS 553
LCR ++ D + + KGY + S
Sbjct: 372 LCR--------------------------------HDKSDHLIKAYELLSSKGYFSELQS 399
Query: 554 YRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQ 612
Y ++ L R + L EM G P ++N+ I+ A A+++++ M
Sbjct: 400 YSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMF 459
Query: 613 RNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKAD 671
G N ++ ++++ ++LR F+ + + + +Y +I GLCK K +
Sbjct: 460 VEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
Query: 672 IALEL---CFE 679
A+E+ C E
Sbjct: 520 AAMEVFRKCME 530
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 141/342 (41%), Gaps = 18/342 (5%)
Query: 538 LLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKP-HCDIFNSFIDGAM 596
L ++K L S YR ++ L+ ++ F+ L E + G+ H D+ N + G
Sbjct: 104 LFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLT 163
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTK 655
D A+++F M+ G+ N + + + RS + LR ++++ + ++
Sbjct: 164 SDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGS 223
Query: 656 LYNRMIV-GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNV 714
+ +I+ LCK + A + E+ + P Y V+ + YE ++
Sbjct: 224 IIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKK 283
Query: 715 YEKAG--RRLTSFLGNVLLFHSMI----SPEVYHSCVDLRREKEGEF-LDSSMLTLIIGA 767
K G R + + +L S + EV V G+F +D+ +L +IG+
Sbjct: 284 KRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS------GKFPMDNDILDALIGS 337
Query: 768 FSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPN 826
S + +++ L +++ I T + L + L HD D + ++ + +G
Sbjct: 338 VSA-VDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE 396
Query: 827 RWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+Y LM GR E+ + EM K+G P + N +
Sbjct: 397 LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 180/436 (41%), Gaps = 77/436 (17%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G LD A +FFR+ R+ + + +N ++ + + ++ EL+ +M + I P +VT
Sbjct: 230 GELDFATKFFRRMRERD-----VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVT 284
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
N ++ + +LG D A++L FG++ + + +I L +G +A + R
Sbjct: 285 WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
G P+ T + +A I++ ++ A++ F+ + + V + G++E
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 502 DGYLMRGDLDKVTAR--FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
D R D V + +++ MI G+ ++ A L M++
Sbjct: 405 DA---RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA-------------- 447
Query: 560 CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG-IMT 618
NL +P+ +N+ I G + A ++F+ M+++G +
Sbjct: 448 -------------NL-------RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQR 487
Query: 619 NASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCF 678
N ++ L++ Y ++ + +AL F ++ + + I+ L L C
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV---TILSL---------LPACA 535
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVN-----LVNVYEKAGR---RLTSFLG--- 727
+L + I C L+R +A++ L + Y K+G T FLG
Sbjct: 536 NLLGAKMVREIHG--------CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 728 -NVLLFHSMISPEVYH 742
+++ ++S+I V H
Sbjct: 588 KDIITWNSLIGGYVLH 603
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 180/450 (40%), Gaps = 73/450 (16%)
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR-- 516
LCR + E LD ++ STY + + + +G + G ++ T
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDV 115
Query: 517 FSYAKMIMGFIKSNRGDIAARLLVEMKEK---------GYELKRSSYRHVLHCLLHMDNP 567
F K++ + K A ++ M+E+ G + + +R V
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREV---------- 165
Query: 568 RTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
+ F L MM G P +F + G + + + + ++ + G+ + +
Sbjct: 166 -AKLFRL--MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSI 222
Query: 627 MKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLN 686
+ Y + + A +FF +R + V++ +N +++ C++ K + A+EL EM K G++
Sbjct: 223 LAVYAKCGELDFATKFFRRMRERDVIA---WNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 687 PSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVY----H 742
P + + +L+ L + A++L+ E G +V + +MIS ++ +
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG-----ITADVFTWTAMISGLIHNGMRY 334
Query: 743 SCVDLRREK--EGEFLDSSMLTLIIGAFSGCLRV--------SYSIQ-----------EL 781
+D+ R+ G ++ + + A S CL+V S +++ L
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACS-CLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 782 EELIAKCFPV-------------DIYTYNLLMRKLTHHDM-DKACELFDRMCQRGLEPNR 827
++ +KC + D+YT+N ++ KA ELF RM L PN
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 828 WTYGLMAHGFSNHGRKDEAKRWVHEMLKKG 857
T+ M G+ +G + EA M K G
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 281 LIGVLCESNR---FERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
+I +L +SNR + +E + E ++ + IR + GRL++A+ F+ +
Sbjct: 52 MIDILGKSNRVLEMKYVIERMKEDSCECK-DSVFASVIRTFSRAGRLEDAISLFKSLHEF 110
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC----IPPNMVTMNAVLCFFCKLG 393
V + ++ L+ +++E+ L+ + + C + + +N ++ C++
Sbjct: 111 -NCVNWSLSFDTLLQEMVKESELEAACHIF---RKYCYGWEVNSRITALNLLMKVLCQVN 166
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS----SGTGYFPDR 449
D+A ++F + G P+ +Y+ L+ C +G +EA +L S S G D
Sbjct: 167 RSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDI 226
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSA--------LCRAGRVE 501
+ L +ALC ++D+ ++L L + Y + + R R+
Sbjct: 227 VVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLL 286
Query: 502 DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
L+RG + SY+ M + + +L+ M+ KG+E Y + L
Sbjct: 287 TETLIRG---AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKAL 343
Query: 562 LHMDNPR--TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+ N M H P ++N I G K M+ G +
Sbjct: 344 CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKS---------MEAVGYLKK 394
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFE 679
S Q+ V + + Y ++ GLC+ + A ++ E
Sbjct: 395 MSKQV------------------------SCVANEETYQTLVDGLCRDGQFLEASQVMEE 430
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAV 709
ML P +E Y ++++ LC + R YEAV
Sbjct: 431 MLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 13/266 (4%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLV------GSGKELHRSELSFLIGVLCESNRFERAVELV 298
I++K C +G+LEEA L + GSG+++ + L+ LC++ + A+E++
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI--LLDALCDAGEVDDAIEIL 249
Query: 299 SEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
+ G P + + E ++ + G +PC Y+ + L
Sbjct: 250 GKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG-LSPNY 414
E +L + E+L+ M P A + C+ G + A+ + N G P
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRS-SSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
Y LI LC DG EA L+ S + T+ TL + LCR+ + E +++
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 474 FALERRFMPNSSTYSRFVSALCRAGR 499
L + P TY + LC R
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDR 455
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 176/450 (39%), Gaps = 62/450 (13%)
Query: 281 LIGVLCESNR---FERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
+I +L +SNR + +E + E ++ + IR + GRL++A+ F+ +
Sbjct: 52 MIDILGKSNRVLEMKYVIERMKEDSCECK-DSVFASVIRTFSRAGRLEDAISLFKSLHEF 110
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC----IPPNMVTMNAVLCFFCKLG 393
V + ++ L+ +++E+ L+ + + C + + +N ++ C++
Sbjct: 111 -NCVNWSLSFDTLLQEMVKESELEAACHIF---RKYCYGWEVNSRITALNLLMKVLCQVN 166
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS----SGTGYFPDR 449
D+A ++F + G P+ +Y+ L+ C +G +EA +L S S G D
Sbjct: 167 RSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDI 226
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSA--------LCRAGRVE 501
+ L +ALC ++D+ ++L L + Y + + R R+
Sbjct: 227 VVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLL 286
Query: 502 DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
L+RG + SY+ M + + +L+ M+ KG+E Y + L
Sbjct: 287 TETLIRG---AIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKAL 343
Query: 562 LHMDNPR--TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
+ N M H P ++N I G K M+ G +
Sbjct: 344 CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKS---------MEAVGYLKK 394
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFE 679
S Q+ V + + Y ++ GLC+ + A ++ E
Sbjct: 395 MSKQV------------------------SCVANEETYQTLVDGLCRDGQFLEASQVMEE 430
Query: 680 MLKVGLNPSIECYEVLVQKLCSLKRYYEAV 709
ML P +E Y ++++ LC + R YEAV
Sbjct: 431 MLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 13/266 (4%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLV------GSGKELHRSELSFLIGVLCESNRFERAVELV 298
I++K C +G+LEEA L + GSG+++ + L+ LC++ + A+E++
Sbjct: 192 ILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRI--LLDALCDAGEVDDAIEIL 249
Query: 299 SEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
+ G P + + E ++ + G +PC Y+ + L
Sbjct: 250 GKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLF 309
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG-LSPNY 414
E +L + E+L+ M P A + C+ G + A+ + N G P
Sbjct: 310 EEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRS-SSGTGYFPDRRTFSTLANALCRECKIDEMWDLLD 473
Y LI LC DG EA L+ S + T+ TL + LCR+ + E +++
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 474 FALERRFMPNSSTYSRFVSALCRAGR 499
L + P TY + LC R
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDR 455
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/480 (19%), Positives = 182/480 (37%), Gaps = 44/480 (9%)
Query: 111 GDDGDILSCLKFFDWAG-RQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPH 169
G+ G + SCL F++W ++P R V +F +L R+ + L + P
Sbjct: 213 GESGFVKSCLYFYEWMSLQEPSLASPRACSV-LFTLLGRERMADYILLLL-----SNLPD 266
Query: 170 RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIA 229
+ + D + AI+G L R+ D + Y A D I
Sbjct: 267 KEEFRDVRLYNAAISG-------LSASQRYD----DAW------------EVYEAMDKI- 302
Query: 230 NQICMRGYESHMTNVIVIKHLCKQGR-LEEAEAHLNGLVGSGKELHRSELSFLIGVLCES 288
Y ++T I+I L K GR +E + G + + L+ C+
Sbjct: 303 -----NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDE 357
Query: 289 NRFERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
E A+ + +E N Y + + ++E F + RD +G P
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRD-KGLKPSAAT 416
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG-MVDVALELFNSR 405
YNIL+ R + V LL +M + + PN+ + ++ + + M D+A + F
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM 476
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKI 465
+ GL P+ +Y LI G ++AY G P T++++ +A R
Sbjct: 477 KKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT 536
Query: 466 DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKV---TARFSYAKM 522
++ ++ L + TY+ + + G + + + K+ + +Y +
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 523 IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGK 582
+ + + + +LL EM + +Y +++ + + + + FF M+ G+
Sbjct: 597 MNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQ 656
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 97/498 (19%), Positives = 185/498 (37%), Gaps = 83/498 (16%)
Query: 377 PNMVTMNAVLCFFCKLG---MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEA 433
P++ + A F LG M D L L ++ + Y I L +A
Sbjct: 233 PSLASPRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDA 292
Query: 434 YRVLRSSSGTGYFPDRRTFSTLANALCRECK-IDEMWDLLDFALERRFMPNSSTYSRFVS 492
+ V + +PD T + L L + + E+W++ + E+ + + V
Sbjct: 293 WEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVK 352
Query: 493 ALCRAGRVEDGYLMRGDLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
+ C G E+ +++ +++K R + Y ++ + KSN + L EM++KG
Sbjct: 353 SFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGL-- 410
Query: 550 KRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFE 609
KP +N +D +PD+ +
Sbjct: 411 --------------------------------KPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 610 LMQRNGIMTNASSQILVMKSYFRSRRISD--ALRFFNDIRHQVVVSTKLYNRMIVGLCKS 667
M+ G+ N S ++ +Y R++++SD A F + + S+ Y +I S
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 668 DKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLG 727
+ A EM K G+ PS+E Y + L + +R + L+ +++ R G
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSV---LDAFRRSGDTGKLMEIWKLMLRE--KIKG 553
Query: 728 NVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAK 787
+ +++++ K+G ++++ ++ FS
Sbjct: 554 TRITYNTLLDGFA----------KQGLYIEARD---VVSEFSKM---------------- 584
Query: 788 CFPVDIYTYNLLMRKLTHHDMD-KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEA 846
+ TYN+LM D K +L M L+P+ TY M + F R +
Sbjct: 585 GLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFV---RVRDF 641
Query: 847 KR--WVHEMLKKGFNPPE 862
KR + H+M+ K P+
Sbjct: 642 KRAFFYHKMMVKSGQVPD 659
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 35/260 (13%)
Query: 611 MQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDK 669
M++ GI +N +M +Y +S I + F ++R + + S YN ++ + +
Sbjct: 370 MEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQ 429
Query: 670 ADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNV 729
DI L EM +GL P+++ Y L+ K+
Sbjct: 430 PDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM------------------------ 465
Query: 730 LLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF 789
S ++ + + LR +K G S T +I A+S + EE+ +
Sbjct: 466 ----SDMAADAF-----LRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
Query: 790 PVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
+ TY ++ D K E++ M + ++ R TY + GF+ G EA+
Sbjct: 517 KPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARD 576
Query: 849 WVHEMLKKGFNPPENTRNVI 868
V E K G P T N++
Sbjct: 577 VVSEFSKMGLQPSVMTYNML 596
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 270 GKELHRSELSFLIGVLCESNRFERAVELVSEFGT--SLPLENAYGVWIRGLVQGGRLDEA 327
G E+ L+ LI LCES E A++L+ EF S P + IRG G+ +EA
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 328 LEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLC 387
+ ++ + E P + +NILI L ++ R+++ +LL M PN T VL
Sbjct: 257 FKLL-ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL- 314
Query: 388 FFCKLGMVDV-----ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
G++D A E+ + +G+ P++++YK ++L LC E VLR
Sbjct: 315 ----YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVN 370
Query: 443 TGYFP 447
G+ P
Sbjct: 371 HGFVP 375
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 4/249 (1%)
Query: 321 GGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMV 380
GR++ A+E D G P +N ++ L+ +++++ + + + +
Sbjct: 145 AGRINRAIEILFGMPDF-GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 381 TMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS 440
+N ++ C+ G ++ AL+L + Q PN M + LI C G +EA+++L
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
PD TF+ L + L ++ +++E DLL+ + PN TY + L R
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 501 EDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
+ M + R SY KM++G ++ +L +M G+ K + V
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKV 383
Query: 558 LHCLLHMDN 566
+ C++ +N
Sbjct: 384 VQCVVSKNN 392
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 16/229 (6%)
Query: 646 IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRY 705
++H VV Y+ MI K + L+L M K + P + Y +V L
Sbjct: 298 VKHDVVS----YSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 706 YEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLII 765
EA NL+ E+ NV+ ++S+I P + ++ E L+ + I
Sbjct: 354 SEARNLMKTMEEE----KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP-TI 408
Query: 766 GAFSGCLRVSYSIQELEELIAK-----CFPVDIYTYNLLMRKLTH-HDMDKACELFDRMC 819
+ +R+ + +E+ EL+AK C P + TY +L+RKL D D L+D M
Sbjct: 409 RTYHAFMRILRTGEEVFELLAKMRKMGCEPT-VETYIMLIRKLCRWRDFDNVLLLWDEMK 467
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
++ + P+ +Y +M HG +G+ +EA + EM KG P EN ++I
Sbjct: 468 EKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 17/249 (6%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
+Y I +GG L++ L+ F + + E P + YN ++ L + + + + L+
Sbjct: 304 SYSSMISCYSKGGSLNKVLKLFDRMK-KECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 370 MNE-TCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
M E I PN+VT N+++ CK + A ++F+ + GL P Y + L
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---R 419
Query: 429 CPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
+E + +L G P T+ L LCR D + L D E+ P+ S+Y
Sbjct: 420 TGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 489 RFVSALCRAGRVEDGYLMRGDL------------DKVTARFSYAKMIMGFIKSNRGDIAA 536
+ L G++E+ Y ++ D + + FS + I ++G++
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNK 539
Query: 537 RLLVEMKEK 545
+V+ E+
Sbjct: 540 GAIVKKSER 548
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
V Y+ +I + L V +L M + CI P+ NAV+ K V A L +
Sbjct: 303 VSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKT 362
Query: 405 -RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
+ G+ PN + Y LI LC +EA +V G FP RT+ L
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG- 421
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYA 520
+E+++LL + P TY + LCR ++ L+ ++ + T SY
Sbjct: 422 --EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 521 KMIMGFIKSNRGDIAARLLVEMKEKG 546
MI G + + + A EMK+KG
Sbjct: 480 VMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 146/381 (38%), Gaps = 43/381 (11%)
Query: 325 DEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNA 384
+ A FF +G+V Y+ +I L + + + L+ +M + P++V
Sbjct: 142 ETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQT 199
Query: 385 VLCF---FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
+L +C + V A+ F++ +F L ++ L+ LC +A ++ +
Sbjct: 200 LLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNK 259
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
F D ++F+ + N C + + A RV
Sbjct: 260 DKYPF-DAKSFNIVLNGWCN----------------------------VIGSPREAERV- 289
Query: 502 DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
++ G++ SY+ MI + K + +L MK++ E R Y V+H L
Sbjct: 290 --WMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHAL 347
Query: 562 LHMDNPRTRFFNLLEMMTHGK---PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT 618
+ + NL++ M K P+ +NS I A K + A++VF+ M G+
Sbjct: 348 AKA-SFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFP 406
Query: 619 NASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCF 678
+ M+ + + L + + V T Y +I LC+ D L L
Sbjct: 407 TIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVET--YIMLIRKLCRWRDFDNVLLLWD 464
Query: 679 EMLKVGLNPSIECYEVLVQKL 699
EM + + P + Y V++ L
Sbjct: 465 EMKEKTVGPDLSSYIVMIHGL 485
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 157/399 (39%), Gaps = 8/399 (2%)
Query: 107 LRHGGDDGDILSCLKFFDWAGRQPRFYHTRT-TFVAIFRILSCARLRPLVFDFLRDFRSC 165
+RHG + L FF+WA + + H + + + R L + + +S
Sbjct: 124 VRHGIP---LHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSR 180
Query: 166 SFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAF 225
+ L+ Y AG A+H RM G D + I++++L+ +
Sbjct: 181 NVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEA 240
Query: 226 DVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVL 285
+ + R + +++ C+ G + EAE + +G E + S +I L
Sbjct: 241 QSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 286 CESNRFERAVELVSEFGTSLPLENA--YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPC 343
C + RA ++ ++ S NA + +R V+ GR ++ L+ + Q + G P
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL-GCEPD 359
Query: 344 KVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
+ YN LI R+ L++ ++L M + N T N + + K V+ A +++
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
+ PN + Y L+ ++ + P+ T+ L C
Sbjct: 420 KMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMG 479
Query: 464 KIDEMWDLLDFALERR-FMPNSSTYSRFVSALCRAGRVE 501
+ + L +E + P+ S Y ++ L RAG+++
Sbjct: 480 HWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLK 518
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 5/254 (1%)
Query: 305 LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVY 364
+P + A+ + I L + R EA FF +D F P + Y L+ R + +
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR--FEPDVIVYTNLVRGWCRAGEISEAE 275
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
++ +M I PN+ T + V+ C+ G + A ++F G +PN + + L+
Sbjct: 276 KVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVH 335
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
G ++ +V G PD T++ L A CR+ ++ +L+ ++++ N+
Sbjct: 336 VKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA 395
Query: 485 STYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVE 541
ST++ + + V + M + + +Y ++ F+ S D+ ++ E
Sbjct: 396 STFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKE 455
Query: 542 MKEKGYELKRSSYR 555
M +K E ++YR
Sbjct: 456 MDDKEVEPNVNTYR 469
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 38/277 (13%)
Query: 608 FELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKS 667
F M+ G + + + +V+ + R RR S+A FF+ ++ + +Y ++ G C++
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRA 268
Query: 668 DKADIALELCFEMLKVGLNPSIECYEVLVQKLC---SLKRYYEAV--------------- 709
+ A ++ EM G+ P++ Y +++ LC + R ++
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 710 -NLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAF 768
NL+ V+ KAGR VL +VY+ + +K G D+ +I A
Sbjct: 329 NNLMRVHVKAGR-----TEKVL--------QVYN-----QMKKLGCEPDTITYNFLIEAH 370
Query: 769 SGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNR 827
+ +++ L +I K V+ T+N + R + D++ A ++ +M + EPN
Sbjct: 371 CRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNT 430
Query: 828 WTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
TY ++ F D + EM K P NT
Sbjct: 431 VTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNT 467
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 160/412 (38%), Gaps = 70/412 (16%)
Query: 320 QGGRLDEALEFF-----RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
G L ++L FF R D + P YN +I + + + L+ M
Sbjct: 126 HGIPLHQSLAFFNWATSRDDYDHKSPHP----YNEMIDLSGKVRQFDLAWHLIDLMKSRN 181
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ ++ T ++ + + G+ A+ FN +G P+ +A+ +I L
Sbjct: 182 VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLS--------- 232
Query: 435 RVLRSSSGTGYF--------PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSST 486
R R+S +F PD ++ L CR +I E + PN T
Sbjct: 233 RKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYT 292
Query: 487 YSRFVSALCRAGRVEDGYLMRGD-LDKVTA--RFSYAKMIMGFIKSNRGDIAARLLVEMK 543
YS + ALCR G++ + + D LD A ++ ++ +K+ R + ++ +MK
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 352
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDL 603
+ G E P T +N L + HC N ++ A+
Sbjct: 353 KLGCE------------------PDTITYNFL-----IEAHCRDEN--LENAV------- 380
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYN---R 659
+V M + NAS+ + + + R ++ A R ++ + + +T YN R
Sbjct: 381 --KVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Query: 660 MIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNL 711
M VG S D+ L++ EM + P++ Y +LV C + + A L
Sbjct: 439 MFVG---SKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKL 487
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 123/605 (20%), Positives = 236/605 (39%), Gaps = 71/605 (11%)
Query: 278 LSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
+S ++ L NR+E +++ + +N + V IR L + G ++ + F+ +
Sbjct: 78 VSEVVDRLMALNRWEEVDGVLNSWVGRFARKN-FPVLIRELSRRGCIELCVNVFKWMKIQ 136
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+ + YN++I R N + L +M + P+ T +A++ + G
Sbjct: 137 KNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRW 196
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A+ L + + ++P+ Y LI G +EA V + + G PD T + + +
Sbjct: 197 AMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLS 256
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARF 517
A + + + + P+++T++ + L + G+
Sbjct: 257 AYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ--------------- 301
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR-----SSYRHVLHCLLHMDNPRTRFF 572
A L M+EK E + +S H+ ++N R F
Sbjct: 302 -----------------ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF- 343
Query: 573 NLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYF 631
M+ G KP+ +N+ + A V +++NGI+ + S ++ SY
Sbjct: 344 --EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 632 RSRRISDALRFF----NDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
RSR+ A F + R VV+ YN +I + A+E+ +M + G+ P
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVT---YNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDL 747
++ L L + R + VN+ V A R + N ++S I Y + +L
Sbjct: 459 NVVSVCTL---LAACSRSKKKVNVDTVLSAAQSRGINL--NTAAYNSAIGS--YINAAEL 511
Query: 748 RR--------EKEGEFLDSSMLTLIIGAFSGCLRVSY---SIQELEELIAKCFPVDIYTY 796
+ K+ DS T++I SG R+S +I L+E+ P+ Y
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILI---SGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 797 NLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLK 855
+ ++ + + +A +F++M G EP+ Y M H ++ + +A EM
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Query: 856 KGFNP 860
G P
Sbjct: 629 NGIEP 633
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 118/657 (17%), Positives = 249/657 (37%), Gaps = 58/657 (8%)
Query: 114 GDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILS----CARLRPLVFDFLRDFRSCSFPH 169
G I C+ F W Q + + + R+ + + R L F+ + S
Sbjct: 121 GCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEM----QKWSCKP 176
Query: 170 RARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIA 229
A +D L+ + AG+ A++L+ M + Y+ L+N+ + + +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 230 NQICMRGYESHMTNVIVIKHLCKQGR-LEEAEAHLNGLVGSGKELHRSELSFLIGVLCES 288
++ G + ++ K GR +A ++ + G+ + + +I L +
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 289 NRFERAVELVSEF----GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK 344
+ +A++L + P + + G ++ F + +EG P
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF-EAMVAEGLKPNI 355
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
V YN L+G +L D+ + I P++V+ +L + + A E+F
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ PN + Y LI +G EA + R G P+ + TL A R K
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAK 521
+ +L A R N++ Y+ + + A +E + + K + ++
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR---FFNLLEMM 578
+I G + ++ A L EM++ L + Y VL C T FN ++ M
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL-CAYSKQGQVTEAESIFNQMK-M 593
Query: 579 THGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISD 638
+P + S + + K A E+F M+ NGI ++ + +M+++ + + S+
Sbjct: 594 AGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSN 653
Query: 639 ALRFFNDIRHQVV------------------------------------VSTKLYNRMIV 662
+ +R + + +S L N+M+
Sbjct: 654 VFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLH 713
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
KS K + ++L ++++ G+ +++ Y +L++ L ++ + + + ++ AG
Sbjct: 714 LFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAG 770
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 136/310 (43%), Gaps = 20/310 (6%)
Query: 573 NLLEMMTHGKPHC---DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKS 629
N+ + M K +C DI+N I N D AR +F MQ+ +A + ++ +
Sbjct: 128 NVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA 187
Query: 630 YFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPS 688
+ R+ + A+ +D +R + S YN +I S ALE+C +M G+ P
Sbjct: 188 HGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD 247
Query: 689 IECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLF------HSMISPEVYH 742
+ + +++ S ++Y +A++ + + A R + N++++ S + ++++
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 743 SCVDLRREKEGEFLD-SSMLTL--IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLL 799
S + R E + + +S++ L + G C V E ++A+ +I +YN L
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAV------FEAMVAEGLKPNIVSYNAL 361
Query: 800 MRKLTHHDMD-KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
M H M A + + Q G+ P+ +Y + + + + +AK M K+
Sbjct: 362 MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR 421
Query: 859 NPPENTRNVI 868
P T N +
Sbjct: 422 KPNVVTYNAL 431
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 138/335 (41%), Gaps = 16/335 (4%)
Query: 121 KFFDWAGRQPRFYHTRTTFVAIFRILS-CARLRP---LVFDFLRDFRSCSFPHRARYHDT 176
KFF W G Q F HT + + +I + C + L+ + ++D +P A +
Sbjct: 137 KFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKD----GYPTTACTFNL 192
Query: 177 LVVGYAIAG-KPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMR 235
L+ AG D+ + F Y+ +L+SL Y D + Q+
Sbjct: 193 LICTCGEAGLARDVVEQFIKSKTFNYRPYK-HSYNAILHSLLGVKQYKLIDWVYEQMLED 251
Query: 236 GYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA 294
G+ +T IV+ + G+ + L+ +V G + L+ L N+ A
Sbjct: 252 GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 295 VELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
+ L++ E G P + I GL + G+L EA ++F + G P V Y ++I
Sbjct: 312 LNLLNHMREVGVE-PGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMI 369
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ L+ E+ +M E PN+ T N+++ FC G A L G +
Sbjct: 370 TGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCN 429
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
PN++ Y L+ L G EA+ V++ G++
Sbjct: 430 PNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+GF P YNIL+ L N+ LL M E + P ++ ++ + G ++
Sbjct: 286 DGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEA 345
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
+ + G +P+ + Y +I G ++A + + + G P+ T++++
Sbjct: 346 CKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIR 405
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
C K E LL R PN YS V+ L AG+V + + + D+
Sbjct: 406 GFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P +++Y + L+ G + + +++ ++ +GF P + YNI++ R + +Y
Sbjct: 220 PYKHSYNAILHSLL-GVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYR 278
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
LL +M + P++ T N +L AL L N + G+ P + + LI L
Sbjct: 279 LLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLS 338
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
G + + + G PD ++ + ++++ ++ E+ +PN
Sbjct: 339 RAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 398
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLDK--VTARFSYAKMIMGFIKSNRGDI--AARLLVE 541
TY+ + C AG+ ++ + +++ F ++ +K N G + A ++ +
Sbjct: 399 TYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK-NAGKVLEAHEVVKD 457
Query: 542 MKEKGY 547
M EKG+
Sbjct: 458 MVEKGH 463
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 4/204 (1%)
Query: 657 YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYE 716
YN ++ + K D L EM+K G +P + Y +L+ L + + A+NL+N
Sbjct: 260 YNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMR 319
Query: 717 KAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE--KEGEFLDSSMLTLIIGAFSGCLRV 774
+ G + L + +C E K G D T++I + +
Sbjct: 320 EVGVE-PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
Query: 775 SYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRMCQRGLEPNRWTYGLM 833
+ + +E+ K +++TYN ++R +AC L M RG PN Y +
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 834 AHGFSNHGRKDEAKRWVHEMLKKG 857
+ N G+ EA V +M++KG
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 118/331 (35%), Gaps = 44/331 (13%)
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
F + G L + + G + LI T G ++ S Y P
Sbjct: 162 FAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPY 221
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFA----LERRFMPNSSTYSRFVSALCRAGRVEDGY 504
+ +++ + ++L + + L+D+ LE F P+ TY+ + A R G+ + Y
Sbjct: 222 KHSYNAILHSLLGV----KQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 505 LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHM 564
RLL EM + G+ +Y +LH L
Sbjct: 278 --------------------------------RLLDEMVKDGFSPDLYTYNILLHHLATG 305
Query: 565 DNPRTRFFNLLEMM--THGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
+ P NLL M +P F + IDG A K + + + + G +
Sbjct: 306 NKPLAAL-NLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 623 QILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKSDKADIALELCFEML 681
+++ Y + A F ++ + + YN MI G C + K A L EM
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 682 KVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
G NP+ Y LV L + + EA +V
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVV 455
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 199/483 (41%), Gaps = 66/483 (13%)
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
N T++ L +L V ALELF+S GL PN A + L +G ++A+ V
Sbjct: 106 NEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF 165
Query: 438 ----RSSSGTGYFPDRRTFSTLANALC--RECKID-EMWDLLDFALERRFMPNSSTYSRF 490
+ + TG+ T+S + A+ + C+ M+ L+ +RR + Y+
Sbjct: 166 EFMRKKENVTGH-----TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTA 220
Query: 491 VSALCRAGRVEDGY-------LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMK 543
+S LC GR+ + Y +M+GD + +Y+ ++ F++ R ++A + EM
Sbjct: 221 IS-LC--GRINNVYETERIWRVMKGD-GHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 544 EKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPD 602
L+ + ++ + M+ G KP+ N+ I+ A K
Sbjct: 277 NNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVG 336
Query: 603 LAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQ--VVVSTKLYNRM 660
L +V+ +++ G + + ++ + +++ R D L+ F+ IR + ++ LYN
Sbjct: 337 LVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTA 396
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
+V K + A++L +EM GL S Y +++ C R + L VYE +
Sbjct: 397 MVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALL--VYEHMAQ 453
Query: 721 RLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQE 780
R N + S++ ++ S D E
Sbjct: 454 RDCK--PNTFTYLSLVRSCIWGSLWD---------------------------------E 478
Query: 781 LEELIAKCFPVDIYTYNLLMRKLT-HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSN 839
+E+++ K P D+ YN + + + A EL+ +M + GLEP+ T +M
Sbjct: 479 VEDILKKVEP-DVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Query: 840 HGR 842
H +
Sbjct: 538 HQK 540
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 160/398 (40%), Gaps = 46/398 (11%)
Query: 445 YFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM---PNSSTYSRFVSALCRAGRVE 501
+F + R TL+ L + ++D++ L+ RF+ PN+ + F+S L R G ++
Sbjct: 100 HFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQ 159
Query: 502 DGY----LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
+ MR + VT +Y+ M+ + + A R+ E++ E KR S V
Sbjct: 160 KAFTVFEFMRKK-ENVTGH-TYSLMLKAVAEVKGCESALRMFRELER---EPKRRSCFDV 214
Query: 558 LHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+ ++N+ I N ++ +M+ +G +
Sbjct: 215 V----------------------------LYNTAISLCGRINNVYETERIWRVMKGDGHI 246
Query: 618 TNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
+ L++ + R R AL +++ + +++ + MI K +K D+AL++
Sbjct: 247 GTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKI 306
Query: 677 CFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMI 736
MLK G+ P++ L+ L + + +V + G + + N LL ++
Sbjct: 307 FQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALL-TALY 365
Query: 737 SPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSY---SIQELEELIAKCFPVDI 793
Y + L E L L A C ++ Y +++ L E+ V
Sbjct: 366 KANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVST 425
Query: 794 YTYNLLMRKLTHHDMDK-ACELFDRMCQRGLEPNRWTY 830
+YNL++ K A +++ M QR +PN +TY
Sbjct: 426 SSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTY 463
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 140/380 (36%), Gaps = 71/380 (18%)
Query: 322 GRLDEALEFFRQKR--DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNM 379
GR++ E R R +G + ++ Y++L+ +R R + ++ +M I
Sbjct: 225 GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRE 284
Query: 380 VTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRS 439
M A++ K D+AL++F S + G+ PN +A LI +L G ++V
Sbjct: 285 DAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSV 344
Query: 440 SSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
G+ PD T++ L AL + + +++ L D
Sbjct: 345 LKSLGHKPDEYTWNALLTALYKANRYEDVLQLFD-------------------------- 378
Query: 500 VEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
++R + + Y ++ K + A +LL EM+ G + SSY
Sbjct: 379 -----MIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY----- 428
Query: 560 CLLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
N I + K +A V+E M + N
Sbjct: 429 -----------------------------NLVISACEKSRKSKVALLVYEHMAQRDCKPN 459
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFE 679
+ + +++S + DI +V LYN I G+C + A EL +
Sbjct: 460 TFTYLSLVRSCIWGSLWDEV----EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVK 515
Query: 680 MLKVGLNPSIECYEVLVQKL 699
M ++GL P + +++Q L
Sbjct: 516 MREMGLEPDGKTRAMMLQNL 535
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 21/322 (6%)
Query: 118 SCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFDFLRDFRSCSFPHRARY 173
+ L FF W RQP F H T+ + L A+ + L+ + +RD C P+ Y
Sbjct: 341 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRD--GCK-PNTVTY 397
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
+ L+ Y A A+++ +M+ G + D Y L++ A+ F IA +
Sbjct: 398 -NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAK----AGFLDIAMDMY 452
Query: 234 MRGYESHM-----TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCES 288
R E+ + T ++I L K G L A +VG G + + +I + ++
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 289 NRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
+E A++L + + P + Y + + L G L+EA F + + + +VP +
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQ-RKNWVPDEPV 571
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
Y +L+ + + ++ M + + PN+ T N++L F ++ + A L S
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 407 QFGLSPNYMAYKYLILTLCWDG 428
GL P+ Y L+L+ C D
Sbjct: 632 ALGLHPSLQTYT-LLLSCCTDA 652
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 106/265 (40%), Gaps = 3/265 (1%)
Query: 242 TNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEF 301
T ++ +L + + E L+ +V G + + + LI +N + A+ + ++
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 302 GTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENR 359
+ P Y I + G LD A++ + Q+ G P Y+++I L +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY-QRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
L + L +M PN+VT N ++ K + AL+L+ G P+ + Y
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 420 LILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
++ L G +EA V + PD + L + + +D+ W L+
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGY 504
PN T + +S R R+ + Y
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAY 624
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
G+ D T++T+ L R + E+ LLD + PN+ TY+R + + RA +++
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 504 YLMRGDLDKV---TARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+ + + R +Y +I K+ DIA + M+E G +Y +++C
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 561 LLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTN 619
L + EM+ G P+ FN I A + A +++ MQ G +
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 620 ASSQILVMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCF 678
+ +VM+ + +A F ++ R V +Y ++ K+ D A +
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQ 593
Query: 679 EMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLV 712
ML+ GL P++ L+ + R EA NL+
Sbjct: 594 AMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/366 (18%), Positives = 142/366 (38%), Gaps = 39/366 (10%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
AL FF + GF Y ++G L R + ++ +LL +M PN VT N ++
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLI 401
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ + + A+ +FN + G
Sbjct: 402 HSYGRANYLKEAMNVFNQMQEAGCE----------------------------------- 426
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
PDR T+ TL + + +D D+ E P++ TYS ++ L +AG + + +
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRL 486
Query: 507 RGDL--DKVTARF-SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLH 563
++ T ++ MI K+ + A +L +M+ G++ + +Y V+ L H
Sbjct: 487 FCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGH 546
Query: 564 MDNPRTRFFNLLEMM-THGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
EM + P ++ +D A D A + ++ M + G+ N +
Sbjct: 547 CGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPT 606
Query: 623 QILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLK 682
++ ++ R R+S+A + + + +++ C +++ + C +++
Sbjct: 607 CNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMA 666
Query: 683 VGLNPS 688
V +P+
Sbjct: 667 VSGHPA 672
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 13/263 (4%)
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGL 664
++ + M R+G N + ++ SY R+ + +A+ FN ++ ++ Y +I
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 665 CKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTS 724
K+ DIA+++ M + GL+P Y V++ L A L E G+ T
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLF--CEMVGQGCTP 497
Query: 725 FLGNVLLFHSMISPEV----YHSCVDLRREKE--GEFLDSSMLTLIIGAFSGCLRVSYSI 778
N++ F+ MI+ Y + + L R+ + G D ++++ C + +
Sbjct: 498 ---NLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAE 554
Query: 779 QELEELIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGF 837
E+ K + D Y LL+ ++DKA + + M Q GL PN T + F
Sbjct: 555 GVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Query: 838 SNHGRKDEAKRWVHEMLKKGFNP 860
R EA + ML G +P
Sbjct: 615 LRVHRMSEAYNLLQSMLALGLHP 637
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 142/336 (42%), Gaps = 18/336 (5%)
Query: 121 KFFDWAGRQPRFYHTRTTFVAIFRILS-CARLRP---LVFDFLRDFRSCSFPHRARYHDT 176
+FF W+G Q F HT ++ + +I + C + LV + ++D FP AR +
Sbjct: 134 RFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQD----GFPTTARTFNL 189
Query: 177 LVVGYAIAGKPDIALHLLGRMRFQGLDLDGF--GYHILLNSLAENNCYNAFDVIANQICM 234
L+ AG A ++ M+ + + F Y+ +LNSL Y + + Q+
Sbjct: 190 LICSCGEAGLAKQA--VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLE 247
Query: 235 RGYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFER 293
G+ +T I++ + G+++ + + + G + L+ +L + N+
Sbjct: 248 DGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLA 307
Query: 294 AVELVS---EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
A+ ++ E G P Y I GL + G L EA ++F + G P V Y ++
Sbjct: 308 ALTTLNHMKEVGID-PSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
I + L E+ +M PN+ T N+++ C G A L G
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGC 425
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+PN++ Y L+ L G EA +V+R G++
Sbjct: 426 NPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Query: 334 KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLG 393
K + + P K YN ++ LL + K + + M E P+++T N +L +LG
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 394 MVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFS 453
+D LF+ ++ G SP+ Y L+ L P A L G P ++
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM------R 507
TL + L R ++ LD ++ P+ Y+ ++ +G ++ M +
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVK 388
Query: 508 GDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
G L V F+Y MI G + A LL EM+ +G
Sbjct: 389 GQLPNV---FTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 135/331 (40%), Gaps = 17/331 (5%)
Query: 209 YHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVG 268
YH+L+ AE Y A + +++ G+ + ++ +C G A+ + +
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL--ICSCGEAGLAKQAVVQFMK 209
Query: 269 SG-------KELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQG 321
S K + + L+ L+GV + E + + E G S P Y + + +
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVK-QYKLIEWVYKQMLEDGFS-PDVLTYNILLWTNYRL 267
Query: 322 GRLDEALEFFRQ-KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMV 380
G++D F + RD GF P YNIL+ L + N+ L M E I P+++
Sbjct: 268 GKMDRFDRLFDEMARD--GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 381 TMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS 440
++ + G ++ + + G P+ + Y +I G +A + R
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
+ G P+ T++++ LC + E LL R PN YS VS L +AG++
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 501 EDGYLMRGDLDKVTARFSYAKMIMGFIKSNR 531
+ R + ++ + Y ++ +K R
Sbjct: 446 SEA---RKVIREMVKKGHYVHLVPKMMKYRR 473
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 127/352 (36%), Gaps = 38/352 (10%)
Query: 372 ETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPK 431
+ C + + + ++ F + G L + Q G + LI + G K
Sbjct: 142 QECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAK 201
Query: 432 EAYRVLRSSSGTGYFPDRRTFSTLANAL--CRECKIDEMWDLLDFALERRFMPNSSTYSR 489
+A S Y P + +++ + N+L ++ K+ E W + LE F P+ TY+
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIE-W-VYKQMLEDGFSPDVLTYNI 259
Query: 490 FVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
+ R G+++ RF RL EM G+
Sbjct: 260 LLWTNYRLGKMD--------------RFD------------------RLFDEMARDGFSP 287
Query: 550 KRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVF 608
+Y +LH L + P L M G P + + IDG A + +
Sbjct: 288 DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFL 347
Query: 609 ELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGLCKS 667
+ M + G + +++ Y S + A F ++ + + YN MI GLC +
Sbjct: 348 DEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 407
Query: 668 DKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
+ A L EM G NP+ Y LV L + EA ++ K G
Sbjct: 408 GEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 16/331 (4%)
Query: 105 RVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFDFLR 160
+VL+ D G+ L FF W RQP F H T+ + L A+ + L+ + +R
Sbjct: 336 QVLKQMNDYGNALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 161 DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN 220
D C P+ Y + L+ Y A + A+++ +M+ G D Y L++ A+
Sbjct: 393 D--GCQ-PNTVTY-NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 221 CYN-AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
+ A D+ T ++I L K G L A +V G + +
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 280 FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
++ + ++ ++ A++L + + P + Y + + L G L+EA F + +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ- 567
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+ ++P + Y +L+ + ++ ++ M + PN+ T N++L F ++ +
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
A EL + GL P+ Y L+L+ C DG
Sbjct: 628 AYELLQNMLALGLRPSLQTYT-LLLSCCTDG 657
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ G LD A++ + Q+ + G P Y+++I L + L ++L +M + PN
Sbjct: 445 AKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
+VT N ++ K AL+L+ G P+ + Y ++ L G +EA V
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+ PD + L + + +++ W L PN T + +S R
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 499 RVEDGY 504
++ + Y
Sbjct: 624 KIAEAY 629
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 136/371 (36%), Gaps = 67/371 (18%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
AL FF + GF Y ++G L R + + +LL +M PN VT N ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ + ++ A+ +FN + G P+ + Y LI G A + + G
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
PD T+S + N L + + L +++ PN TY+ + +A ++
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN---- 522
Query: 507 RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
A +L +M+ G+E + +Y V+ L
Sbjct: 523 ----------------------------ALKLYRDMQNAGFEPDKVTYSIVMEVL----- 549
Query: 567 PRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
HC + A VF MQ+ + + L+
Sbjct: 550 ----------------GHCGYL-------------EEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 627 MKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
+ + ++ + A +++ + H + + N ++ + +K A EL ML +GL
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 686 NPSIECYEVLV 696
PS++ Y +L+
Sbjct: 641 RPSLQTYTLLL 651
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 16/331 (4%)
Query: 105 RVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFDFLR 160
+VL+ D G+ L FF W RQP F H T+ + L A+ + L+ + +R
Sbjct: 336 QVLKQMNDYGNALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 161 DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN 220
D C P+ Y + L+ Y A + A+++ +M+ G D Y L++ A+
Sbjct: 393 D--GCQ-PNTVTY-NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 221 CYN-AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
+ A D+ T ++I L K G L A +V G + +
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 280 FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
++ + ++ ++ A++L + + P + Y + + L G L+EA F + +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ- 567
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+ ++P + Y +L+ + ++ ++ M + PN+ T N++L F ++ +
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
A EL + GL P+ Y L+L+ C DG
Sbjct: 628 AYELLQNMLALGLRPSLQTYT-LLLSCCTDG 657
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ G LD A++ + Q+ + G P Y+++I L + L ++L +M + PN
Sbjct: 445 AKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
+VT N ++ K AL+L+ G P+ + Y ++ L G +EA V
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+ PD + L + + +++ W L PN T + +S R
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 499 RVEDGY 504
++ + Y
Sbjct: 624 KIAEAY 629
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 136/371 (36%), Gaps = 67/371 (18%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
AL FF + GF Y ++G L R + + +LL +M PN VT N ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ + ++ A+ +FN + G P+ + Y LI G A + + G
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
PD T+S + N L + + L +++ PN TY+ + +A ++
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN---- 522
Query: 507 RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
A +L +M+ G+E + +Y V+ L
Sbjct: 523 ----------------------------ALKLYRDMQNAGFEPDKVTYSIVMEVL----- 549
Query: 567 PRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
HC + A VF MQ+ + + L+
Sbjct: 550 ----------------GHCGYL-------------EEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 627 MKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
+ + ++ + A +++ + H + + N ++ + +K A EL ML +GL
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 686 NPSIECYEVLV 696
PS++ Y +L+
Sbjct: 641 RPSLQTYTLLL 651
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 16/331 (4%)
Query: 105 RVLRHGGDDGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCAR----LRPLVFDFLR 160
+VL+ D G+ L FF W RQP F H T+ + L A+ + L+ + +R
Sbjct: 336 QVLKQMNDYGNALG---FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 161 DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENN 220
D C P+ Y + L+ Y A + A+++ +M+ G D Y L++ A+
Sbjct: 393 D--GCQ-PNTVTY-NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 221 CYN-AFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
+ A D+ T ++I L K G L A +V G + +
Sbjct: 449 FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYN 508
Query: 280 FLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
++ + ++ ++ A++L + + P + Y + + L G L+EA F + +
Sbjct: 509 IMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ- 567
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+ ++P + Y +L+ + ++ ++ M + PN+ T N++L F ++ +
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDG 428
A EL + GL P+ Y L+L+ C DG
Sbjct: 628 AYELLQNMLALGLRPSLQTYT-LLLSCCTDG 657
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 1/186 (0%)
Query: 319 VQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN 378
+ G LD A++ + Q+ + G P Y+++I L + L ++L +M + PN
Sbjct: 445 AKAGFLDIAMDMY-QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 379 MVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR 438
+VT N ++ K AL+L+ G P+ + Y ++ L G +EA V
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 439 SSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
+ PD + L + + +++ W L PN T + +S R
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 499 RVEDGY 504
++ + Y
Sbjct: 624 KIAEAY 629
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/371 (19%), Positives = 136/371 (36%), Gaps = 67/371 (18%)
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
AL FF + GF Y ++G L R + + +LL +M PN VT N ++
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ + ++ A+ +FN + G P+ + Y LI G A + + G
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLS 466
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM 506
PD T+S + N L + + L +++ PN TY+ + +A ++
Sbjct: 467 PDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN---- 522
Query: 507 RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
A +L +M+ G+E + +Y V+ L
Sbjct: 523 ----------------------------ALKLYRDMQNAGFEPDKVTYSIVMEVL----- 549
Query: 567 PRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILV 626
HC + A VF MQ+ + + L+
Sbjct: 550 ----------------GHCGYL-------------EEAEAVFTEMQQKNWIPDEPVYGLL 580
Query: 627 MKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGL 685
+ + ++ + A +++ + H + + N ++ + +K A EL ML +GL
Sbjct: 581 VDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Query: 686 NPSIECYEVLV 696
PS++ Y +L+
Sbjct: 641 RPSLQTYTLLL 651
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 141/682 (20%), Positives = 243/682 (35%), Gaps = 110/682 (16%)
Query: 267 VGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDE 326
VG+ + +S L F G S+ R L S F T + L YG + GRL++
Sbjct: 279 VGARNPIEKS-LHFASG----SDSSPRKPRLTSTFNTLIDL---YG-------KAGRLND 323
Query: 327 ALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
A F + S G V +N +I L + LL M E I P+ T N +L
Sbjct: 324 AANLFSEMLKS-GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILL 382
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
G ++ ALE + + GL P+ + ++ ++ LC E V+
Sbjct: 383 SLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIR 442
Query: 447 PDRRTFSTLANALCRECKIDEMWDLLD-FALERRFMPNSSTYSRFVSALCRAGR-VEDGY 504
D + + E + + L + F L+ + +S+T + + G VE
Sbjct: 443 IDEHSVPVIMQMYVNEGLVVQAKALFERFQLD--CVLSSTTLAAVIDVYAEKGLWVEAET 500
Query: 505 LMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCL 561
+ G + R Y MI + K+ + A L MK +G +Y + L
Sbjct: 501 VFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQML 560
Query: 562 LHMDNPRTRFFNLLEMMTHG-KPHCD---------------------------------- 586
+D L EM+ G KP C
Sbjct: 561 AGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNE 620
Query: 587 -IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFR------SRRISDA 639
++ S I+G + + A + F +M+ +G+ +N ++K+Y + +RR+ D
Sbjct: 621 VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Query: 640 LR-----------------------------FFNDIRHQVVVSTKLYNRMIVGLCKSDKA 670
++ FN +R + + M+
Sbjct: 681 MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGML 740
Query: 671 DIALELCFEMLKVGL-------NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLT 723
D A+E+ EM + GL N + CY Q + ++E + + G T
Sbjct: 741 DEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKT 800
Query: 724 SFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEE 783
F LL + E E + + TL FS +Y+++ +E
Sbjct: 801 LF---TLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL----FSAMGLYAYALESCQE 853
Query: 784 LIAKCFPVDIYTYNLLMRKLTHH-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGR 842
L + P + + YN ++ + D+D A + + RM ++GLEP+ T + + G
Sbjct: 854 LTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGM 913
Query: 843 KDEAKRWVHEMLKKGFNPPENT 864
+ KR VH L G P +
Sbjct: 914 VEGVKR-VHSRLTFGELEPSQS 934
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 129/638 (20%), Positives = 240/638 (37%), Gaps = 93/638 (14%)
Query: 124 DWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARYHDTLVVGYAI 183
D + R+PR T T + ++ RL F +S P +T++
Sbjct: 296 DSSPRKPRLTSTFNTLIDLYG--KAGRLNDAANLFSEMLKS-GVPIDTVTFNTMIHTCGT 352
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRG-YESHMT 242
G A LL +M +G+ D Y+ILL+ A+ A +I G + +T
Sbjct: 353 HGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Query: 243 NVIVIKHLCKQGRLEEAEAHL------------------------NGLVGSGKELHRSEL 278
+ V+ LC++ + E EA + GLV K L
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-- 470
Query: 279 SFLIGVLCESNRFERAVELVSEFGTSLPLENA----------------YGVWIRGLVQGG 322
F + + S +++ +E G + E Y V I+ +
Sbjct: 471 -FQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAK 529
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
++AL F+ ++ +G P + YN L L + + + +L +M ++ P T
Sbjct: 530 LHEKALSLFKGMKN-QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY 588
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSG 442
A++ + +LG++ A++L+ + + G+ PN + Y LI G +EA + R
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 443 TGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED 502
G + ++L A + ++E + D + P+ + + +S G V +
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSE 708
Query: 503 GYLM------RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRH 556
+ +G D + S+A M+ + D A + EM+E G +S+
Sbjct: 709 AESIFNALREKGTCDVI----SFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Query: 557 VLHCLLHMDNPRTRFFNLL-EMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
V+ C D + L EM+ K D + +F + +F L+++ G
Sbjct: 765 VMACYA-ADGQLSECCELFHEMLVERKLLLD-WGTF-------------KTLFTLLKKGG 809
Query: 616 IMTNASSQILVMKSYFRSRRISD-----------ALRFFNDIRHQVVVSTKL------YN 658
+ + A SQ+ +Y ++ ++ L + Q + S ++ YN
Sbjct: 810 VPSEAVSQL--QTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYN 867
Query: 659 RMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
+I S D+AL+ M + GL P I LV
Sbjct: 868 AVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 128/314 (40%), Gaps = 39/314 (12%)
Query: 173 YHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQI 232
++ TL+ Y A + A+ +M G ++ LLN+ + ++ + ++I
Sbjct: 104 FYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 233 CMRGYE---SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESN 289
R + ++ I+IK C G E+A + + G G E+ + ++ L +
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 290 RFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNI 349
LE A +W + +G LD A YN+
Sbjct: 224 E----------------LEVADNLWNEMVKKGCELDNAA------------------YNV 249
Query: 350 LIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFG 409
I +E+ + V EL+ +M+ + P+ ++ N ++ +C+ GM+D A +++
Sbjct: 250 RIMSAQKESPER-VKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNN 308
Query: 410 LSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMW 469
+PN ++ LI LC+ ++ Y + + S PD T L L K D+
Sbjct: 309 CAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAK 368
Query: 470 DLLDFALERRFMPN 483
L+ ++++F P+
Sbjct: 369 GLIR-TVKKKFPPS 381
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 11/249 (4%)
Query: 275 RSELSF--LIGVLCESNRFERAVELVSE----FGTSLPLENAYGVWIRGLVQGGRLDEAL 328
RS +SF L+ S F++ +L E + +P + +YG+ I+ G ++A+
Sbjct: 135 RSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAI 194
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
E RQ + +G + + ++ L ++ L+ L +M + + N +
Sbjct: 195 EIMRQMQ-GKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS 253
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
K V EL S GL P+ ++Y YL+ C G EA +V G P+
Sbjct: 254 AQKESPERVK-ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPN 312
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRG 508
TF TL LC ++ + + ++ +P+ +T V L + +D +G
Sbjct: 313 AATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA---KG 369
Query: 509 DLDKVTARF 517
+ V +F
Sbjct: 370 LIRTVKKKF 378
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 105/261 (40%), Gaps = 6/261 (2%)
Query: 289 NRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQ-KRDSEGFVPCKVRY 347
N R E + ++GT ++ + + D+ + F + + +P K+ Y
Sbjct: 119 NHAMRTFEQMDQYGTPRSAV-SFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 177
Query: 348 NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ 407
ILI + E++ M + + +L K G ++VA L+N +
Sbjct: 178 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 237
Query: 408 FGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE 467
G + AY I++ P+ ++ S G PD +++ L A C +DE
Sbjct: 238 KGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 296
Query: 468 MWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD---LDKVTARFSYAKMIM 524
+ + PN++T+ + LC + E GY + + K+ + +++
Sbjct: 297 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 356
Query: 525 GFIKSNRGDIAARLLVEMKEK 545
G +++ + D A L+ +K+K
Sbjct: 357 GLVENKKRDDAKGLIRTVKKK 377
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 167/425 (39%), Gaps = 44/425 (10%)
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
+EG P V YN L+G +L D+ + I P++V+ +L + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLA 456
A E+F + PN + Y LI +G EA + R G P+ + TL
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 457 NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
A R K + +L A R N++ Y+ + + A +E + + K +
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR--- 570
++ +I G + ++ A L EM++ L + Y VL C T
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL-CAYSKQGQVTEAES 454
Query: 571 FFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSY 630
FN ++ M +P + S + + K A E+F M+ NGI ++ + +M+++
Sbjct: 455 IFNQMK-MAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 631 FRSRRISDALRFFNDIRHQVV------------------------------------VST 654
+ + S+ + +R + + +S
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Query: 655 KLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNV 714
L N+M+ KS K + ++L ++++ G+ +++ Y +L++ L ++ + + + ++
Sbjct: 574 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 633
Query: 715 YEKAG 719
AG
Sbjct: 634 MSGAG 638
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 111/536 (20%), Positives = 206/536 (38%), Gaps = 70/536 (13%)
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
YN++I R N + L +M + P+ T +A++ + G A+ L +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
+ ++P+ Y LI G +EA V + + G PD T + + +A +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGF 526
+ + + P+++T++ + L + G+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQ------------------------ 169
Query: 527 IKSNRGDIAARLLVEMKEKGYELKR-----SSYRHVLHCLLHMDNPRTRFFNLLEMMTHG 581
A L M+EK E + +S H+ ++N R F M+ G
Sbjct: 170 --------ALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVF---EAMVAEG 218
Query: 582 -KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDAL 640
KP+ +N+ + A V +++NGI+ + S ++ SY RSR+ A
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 641 RFF----NDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLV 696
F + R VV+ YN +I + A+E+ +M + G+ P++ L
Sbjct: 279 EVFLMMRKERRKPNVVT---YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL- 334
Query: 697 QKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE------ 750
L + R + VN+ V A R + N ++S I Y + +L +
Sbjct: 335 --LAACSRSKKKVNVDTVLSAAQSRGINL--NTAAYNSAIGS--YINAAELEKAIALYQS 388
Query: 751 --KEGEFLDSSMLTLIIGAFSGCLRVSY---SIQELEELIAKCFPVDIYTYNLLMRKLTH 805
K+ DS T++I SG R+S +I L+E+ P+ Y+ ++ +
Sbjct: 389 MRKKKVKADSVTFTILI---SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 445
Query: 806 H-DMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ +A +F++M G EP+ Y M H ++ + +A EM G P
Sbjct: 446 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 129/294 (43%), Gaps = 17/294 (5%)
Query: 586 DIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFND 645
DI+N I N D AR +F MQ+ +A + ++ ++ R+ + A+ +D
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 646 -IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKR 704
+R + S YN +I S ALE+C +M G+ P + + +++ S ++
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 705 YYEAVNLVNVYEKAGRRLTSFLGNVLLF------HSMISPEVYHSCVDLRREKEGEFLD- 757
Y +A++ + + A R + N++++ S + ++++S + R E + +
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 758 SSMLTL--IIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDMD-KACEL 814
+S++ L + G C V E ++A+ +I +YN LM H M A +
Sbjct: 192 TSIMHLYSVKGEIENCRAV------FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 245
Query: 815 FDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENTRNVI 868
+ Q G+ P+ +Y + + + + +AK M K+ P T N +
Sbjct: 246 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 15/256 (5%)
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR-YNILI 351
R +++ +F + P + A+ + L + G +++A EF S+ P V +N+++
Sbjct: 210 RTFDIMDKFKHT-PYDEAFQGLLCALCRHGHIEKAEEFMLA---SKKLFPVDVEGFNVIL 265
Query: 352 GRLLRENRLKDVYE---LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
N DV E + +M CI PN + + ++ F K+G + +L L++ +
Sbjct: 266 NGWC--NIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKR 323
Query: 409 GLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEM 468
GL+P Y L+ L + C EA ++++ + G PD T++++ LC K+D
Sbjct: 324 GLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVA 383
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVED-GYLMRGDLDKVTARFSYAKMIMG-F 526
++L + P T+ F+ A+ +E G + DL F +I+G
Sbjct: 384 RNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFL---LILGKL 440
Query: 527 IKSNRGDIAARLLVEM 542
K + + A ++ EM
Sbjct: 441 FKGKQPENALKIWAEM 456
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 146/339 (43%), Gaps = 29/339 (8%)
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP-DRRTFSTLA 456
A+ F+ +F +P A++ L+ LC G ++A + +S FP D F+ +
Sbjct: 208 AIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKK--LFPVDVEGFNVIL 265
Query: 457 NALCRECKIDEMW-DLLDFALERRFM------PNSSTYSRFVSALCRAGRVEDGYLMRGD 509
N C +W D+ + R M PN +YS +S + G + D + +
Sbjct: 266 NGWCN------IWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDE 319
Query: 510 LDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDN 566
+ K Y ++ + + D A +L+ ++ E+G + +Y ++ L
Sbjct: 320 MKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGK 379
Query: 567 PRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQIL 625
L M++ P D F++F++ A++ K EV M+ + + + +L
Sbjct: 380 LDVARNVLATMISENLSPTVDTFHAFLE-AVNFEK---TLEVLGQMKISDLGPTEETFLL 435
Query: 626 VMKSYFRSRRISDALRFFNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
++ F+ ++ +AL+ + ++ R ++V + LY I GL + A E+ EM G
Sbjct: 436 ILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
Query: 685 L--NPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
NP ++ ++L ++ R + +NL V + G +
Sbjct: 496 FVGNPMLQ--KLLEEQKVKGVRKSKRMNLQKVGSQEGYK 532
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 21/233 (9%)
Query: 308 ENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFV--PCKVRYNILIGRLL-RENR----- 359
EN Y I + G+L A+ FR S+ P Y+IL LL R N
Sbjct: 207 ENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINH 266
Query: 360 --LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ-FGLSPNYMA 416
++ V L M ++ I P++ +N ++ + V+ AL +F+ S + PN
Sbjct: 267 VYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFT 326
Query: 417 YKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE----MWDLL 472
Y YLI LC G A +L G G+ P+ +++++L NA +ID+ +W+++
Sbjct: 327 YDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMI 386
Query: 473 DFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL--DKVTARFSYAKMI 523
+ F+ +Y V CR G+ ++ + L ++ R SY K++
Sbjct: 387 ENGRVVDFI----SYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLV 435
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 128/350 (36%), Gaps = 57/350 (16%)
Query: 113 DGDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRAR 172
+ D C F+WA +QPRF H ++ R L A++ + D + S
Sbjct: 149 EEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNEN 208
Query: 173 YHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQI 232
+++++ + AGK A+++ F + + +L + ++ +
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNI-------------FRHMVTSKNLECRPTIRTYHILFKAL 255
Query: 233 CMRGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
RG S++ +V +E + +V SG E
Sbjct: 256 LGRGNNSYINHVY----------METVRSLFRQMVDSGIE-------------------- 285
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
P A ++G V +++AL F Q P Y+ LI
Sbjct: 286 -------------PDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIH 332
Query: 353 RLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
L + R + ELL +M PN + N+++ F G +D A++ + G
Sbjct: 333 GLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVV 392
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRE 462
++++Y+ L+ C G EA R+L DR ++ L N L ++
Sbjct: 393 DFISYRTLVDESCRKGKYDEATRLLEMLREKQLV-DRDSYDKLVNVLHKD 441
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 5/221 (2%)
Query: 281 LIGVLCESNRFERAVELVSEFGTSLPLENAYGVW---IRGLVQGGRLDEALEFFRQKRDS 337
LI C R + A+E++ E + +E + V+ I GL + GRL EAL +
Sbjct: 291 LIEGYCRMRRVQIAMEVLEEMKMA-EMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVC 349
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
E P V YN L+ + L ++L M + P T N +F K +
Sbjct: 350 ESG-PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE 408
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
+ L+ + G SP+ + Y ++ LC DG A +V + G PD T + L +
Sbjct: 409 GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
LCR ++E ++ D A+ R +P T+ + L G
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P IFN ++G + K A +++E M+ + + +++ Y R RR+ A+
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 643 FNDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
+++ ++ ++ ++N +I GL ++ + AL + P+I Y LV+ C
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 702 LKRYYEAVNLVNVYEKAGRRLTSFLGNVLL-FHSMISPEVYHSCVDLRREKEGEFLDSSM 760
A ++ + G T+ N + S + + + + G D
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 761 LTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFDRMC 819
LI+ ++S ++Q +E+ + D+ T +L+ L +M ++A E FD
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 820 QRGLEPNRWTYGLMAHGFSNHGRKDEAKR 848
+RG+ P T+ ++ +G + G D AKR
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 126/319 (39%), Gaps = 18/319 (5%)
Query: 232 ICMRGYESHMTNVIVIKHLCKQGRLEEAEAHLN---GLVGSGKELHRSELSFLIGVLCES 288
+C E + V+ + LCK+G + EA +L G + S + L+ S
Sbjct: 205 VCKSATELRLLEVL-LDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 289 NRFERAVELVSEFGT--SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVR 346
+ ++A +L E P YG I G + R+ A+E + + +E + V
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMV- 322
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
+N +I L RL + ++ P +VT N+++ FCK G + A ++
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKID 466
G+ P Y + +E + G+ PDR T+ + LC + K+
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 467 EMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY------LMRGDLDKVTARFSYA 520
+ R P+ T + + LCR +E+ + + RG + ++
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRG----IIPQYITF 498
Query: 521 KMIMGFIKSN-RGDIAARL 538
KMI ++S D+A RL
Sbjct: 499 KMIDNGLRSKGMSDMAKRL 517
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 88/462 (19%), Positives = 161/462 (34%), Gaps = 78/462 (16%)
Query: 331 FRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF-- 388
F+ GF ++ ++ L + + + L+ D + N+V+ + +
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 389 -FCKLGMVDVALELFN-SRSQFGLSPNYMAYK---YLILTLCWDGCPKEAYRVLRSSSGT 443
+ + GMV A+ F +RS + + + L+ LC +G +EA L GT
Sbjct: 182 RYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGT 241
Query: 444 ---GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
+ P R F+ L N R K+ + L + P TY + CR RV
Sbjct: 242 MDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRV 301
Query: 501 EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+ IA +L EMK E+ + ++
Sbjct: 302 Q--------------------------------IAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 561 LLHMDNPRTRFFNLLEMMT-----HGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
L R L MM P +NS + A A ++ ++M G
Sbjct: 330 L----GEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRG 385
Query: 616 IMTNASSQILVMKSYFRSRRISDALR-FFNDIRHQVVVSTKLYNRMIVGLCKSDKADIAL 674
+ ++ K + + + + + +F I Y+ ++ LC+ K +A+
Sbjct: 386 VDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAM 445
Query: 675 ELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG--------------- 719
++ EM G++P + +L+ LC L+ EA + + G
Sbjct: 446 QVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Query: 720 ---------RRLTSFLGNVLLFHSMISPEVYHSCVDLRREKE 752
+RL+S + + L HS P Y VD +K+
Sbjct: 506 RSKGMSDMAKRLSSLMSS--LPHSKKLPNTYREAVDAPPDKD 545
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 6/199 (3%)
Query: 311 YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVP-CKVRYNILIGRLLRENRLKDVYELLMD 369
YG ++G EA+E + + V + YN ++ L + + +L
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 370 MNETCIPP-----NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
+ + PP N+ T N ++ +C G + A+E+F F SP+ +++ L+ L
Sbjct: 336 VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNS 484
C + EA ++ PD T+ L + +E KIDE +E PN
Sbjct: 396 CDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNL 455
Query: 485 STYSRFVSALCRAGRVEDG 503
+ Y+R L +AG+++D
Sbjct: 456 AVYNRLQDQLIKAGKLDDA 474
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 22/240 (9%)
Query: 280 FLIGVLCESNRFERAVELVSEFGTSL----PLENAYGVWIRGLVQGGRLDEALEFFRQ-K 334
L+ L ++ E+A+E+ + P+ Y + G V+ D L+ +++ K
Sbjct: 206 ILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPV--VYSYLMMGCVKNSDADGVLKLYQELK 263
Query: 335 RDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPN----MVTM--NAVLCF 388
GFV V Y G+L++ +K++ + M+ E + N M M N VL
Sbjct: 264 EKLGGFVDDGVVY----GQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEA 319
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMA-----YKYLILTLCWDGCPKEAYRVLRSSSGT 443
+ G D AL+LF++ + P ++A + ++ C G +EA V R
Sbjct: 320 LSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDF 379
Query: 444 GYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
PD +F+ L N LC + E L E+ P+ TY + + G++++G
Sbjct: 380 KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG 439
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 87/192 (45%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
++ + V +LDEA++ F++ + G P V YN +I L R+ + D+ + +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
+ + P++++ N +L F + + +++ LSPN +Y + L +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
+A ++ G PD T++ L A + ++E+ + E+ P++ TY
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 490 FVSALCRAGRVE 501
+ LC+ G ++
Sbjct: 339 LIPLLCKKGDLD 350
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 10/229 (4%)
Query: 281 LIGVLCESNRFERAVELVSEFGTSL---PLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
L+ S + + A++ E L P Y I+ L + G +D+ L F ++ +
Sbjct: 163 LLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF-EELEK 221
Query: 338 EGFVPCKVRYNILIGRLLRENRLKD---VYELLMDMNETCIPPNMVTMNAVLCFFCKLGM 394
GF P + +N L+ R + +++L+ N + PN+ + N+ + +
Sbjct: 222 NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKN---LSPNIRSYNSRVRGLTRNKK 278
Query: 395 VDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFST 454
AL L + G+SP+ Y LI D +E + G PD T+
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCM 338
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
L LC++ +D ++ + A++ + + + Y V L AG++++
Sbjct: 339 LIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA 387
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSG------------KELHRSELSFLIGVLCESNRFER 293
+IK LC++G +++ + L +G +E +R EL F+ G +R
Sbjct: 199 MIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRREL-FVEG--------DR 249
Query: 294 AVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGR 353
+L+ S P +Y +RGL + + +AL + +EG P YN LI
Sbjct: 250 IWDLMKSKNLS-PNIRSYNSRVRGLTRNKKFTDALNLIDVMK-TEGISPDVHTYNALITA 307
Query: 354 LLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPN 413
+N L++V + +M E + P+ VT ++ CK G +D A+E+ + L
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSR 367
Query: 414 YMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF---PD 448
YK ++ L G EA +++++ YF PD
Sbjct: 368 PNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPD 405
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 107/501 (21%), Positives = 202/501 (40%), Gaps = 80/501 (15%)
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP-NYMAYKYLILTL 424
LL T IPP T N + ++G + A +LF+S +S N M Y +
Sbjct: 6 LLRRTYSTTIPPP--TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLM 63
Query: 425 CWDGCPKEAYRVLRSSSGTGYFPDRR--TFSTLANALCRECKIDEMWDLLDFALERRFMP 482
P++A ++ PDR +++ L + + +IDE + D ER
Sbjct: 64 -----PRDARKLFDE------MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER---- 108
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEM 542
N +++ V G+V+ + + + + S+ M++GF++ R D A +L
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPE-KNKVSWTVMLIGFLQDGRIDDACKL---- 163
Query: 543 KEKGYELKRSSYRHVLHCLLHMDN-PRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKP 601
YE+ + DN RT S I G +
Sbjct: 164 ----YEM-----------IPDKDNIART--------------------SMIHGLCKEGRV 188
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMI 661
D ARE+F+ M ++T + ++ Y ++ R+ DA + F+ + + VS + M+
Sbjct: 189 DEAREIFDEMSERSVITWTT----MVTGYGQNNRVDDARKIFDVMPEKTEVS---WTSML 241
Query: 662 VGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
+G ++ + + A EL FE++ V P I C + + L + E V++ R
Sbjct: 242 MGYVQNGRIEDAEEL-FEVMPV--KPVIACNAM----ISGLGQKGEIAKARRVFDSMKER 294
Query: 722 LTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQEL 781
+ V+ H E+ + + +K+G L I+ + + + Q
Sbjct: 295 NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVH 354
Query: 782 EELIAKCFPVDIYTYNLLMRK-LTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNH 840
+L+ F VD+Y ++LM + ++ K+ +FDR + + + + G+++H
Sbjct: 355 AQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI----IMWNSIISGYASH 410
Query: 841 GRKDEAKRWVHEMLKKGFNPP 861
G +EA + EM G P
Sbjct: 411 GLGEEALKVFCEMPLSGSTKP 431
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 401 LFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC 460
L ++ S++G+ + +++ I + C G AY +R +G PD T++TL +AL
Sbjct: 164 LHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALY 223
Query: 461 RE--CKI-DEMWDLLDFALERRFMPNSSTYS---RFVSALCRAGRVEDGYLMRGDLDKVT 514
+ C I + +W+L+ + + PN +T++ +F+ RA D L+ L
Sbjct: 224 KHERCVIGNGLWNLM---VLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEP 280
Query: 515 ARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
+Y +I GF + D+A R+ M KGY+ Y+ ++H L N F+L
Sbjct: 281 DSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGN-----FDL 335
Query: 575 LEMM------THGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
M P+ D + G + + D A+ + EL+ R + S Q+L +K
Sbjct: 336 AYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR-VPPFRSKQLLSLK 394
Query: 629 S 629
S
Sbjct: 395 S 395
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 1/194 (0%)
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
++ + I+ + G LD A R+ S G P V Y LI L + R L
Sbjct: 179 SFNIAIKSFCELGILDGAYMAMREMEKS-GLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M PN+ T N + F A +L + + P+ + Y +I
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
P A RV + G GY P+ + + T+ + LC+ D + + + +++ PN T
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 490 FVSALCRAGRVEDG 503
+ L + G+++
Sbjct: 358 LLKGLVKKGQLDQA 371
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+G P +N+ I L+ R D +LL+ M + + P+ +T N V+ F D+
Sbjct: 241 KGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDM 300
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A ++ + G PN Y+ +I LC G AY + + ++P+ T L
Sbjct: 301 AERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLK 360
Query: 458 ALCRECKIDEMWDLLDFALERRFMP 482
L ++ ++D+ +++ + RR P
Sbjct: 361 GLVKKGQLDQAKSIMEL-VHRRVPP 384
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 177/795 (22%), Positives = 301/795 (37%), Gaps = 143/795 (17%)
Query: 190 ALHLLGRMRFQGLDLDGFGYHILLNSLAE-NNCYNAFDVIANQICMRGYESHMT-NVI-- 245
A+ L MR +GL Y IL++ L + +A+ + + + R +HM + I
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE----- 300
VI+ LC +++EA LV G L+ S S + E FE + + E
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEP 321
Query: 301 ---------------FGTSLPL--------------ENAYGVWIRGLVQGGRLDEALEFF 331
FG+ E +G+ I G + A+ +
Sbjct: 322 DVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYL 381
Query: 332 RQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCK 391
+ S+G+ P YN ++ L R+ + + +L +M E + ++ T ++ +CK
Sbjct: 382 SEIM-SKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 392 LGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRT 451
+ A + N +GL L G A R+ R + T F
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDST--FSKAEF 498
Query: 452 FSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD-- 509
F L N L +D ++ L+R +P F S + RA EDG L
Sbjct: 499 FDDLGNGLYLHTDLDAYEQRVNMVLDRSVLP------EFNSLIVRAS--EDGDLQTALRL 550
Query: 510 LDKVT------ARFSYAKMIMGFIKSNRG-DIAARLLVEMKEKGYEL------------- 549
LD++ +R S+A ++ S ++ LL + + Y+L
Sbjct: 551 LDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYC 610
Query: 550 KRSSYRH---VLHCLLHMDNP--RTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANK--PD 602
K+ RH + H ++ M +P + +L+ + D+ N + GA + PD
Sbjct: 611 KKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVW--GAAQNDNWLPD 668
Query: 603 L--AREVFELMQRNGIMTNASSQIL--VMKSYFRSRRISDALRFFND---------IRHQ 649
L +++ + R G++ Q+ V SY S+ S+A R F + I H
Sbjct: 669 LNDCGDLWNCLVRKGLVEEVV-QLFERVFISYPLSQ--SEACRIFVEKLTVLGFSCIAHS 725
Query: 650 VV---------VSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
VV V ++YN +I GLC K A + EML PS+ +L+ +LC
Sbjct: 726 VVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLC 785
Query: 701 SLKRYYEAVNLVNVYEK-------------AGRRLTS------FLGNVLLFHSMISPEVY 741
+ A NL + AG+ L + L N L ++ I ++
Sbjct: 786 RANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMF 845
Query: 742 HS-CVDLRREKEGEFLDSSMLTLIIGAFSG--------CLR-VSYSIQELEE--LIAKCF 789
C K E L + II + CL S S L+E L+ +
Sbjct: 846 QGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESN 905
Query: 790 PVDIYTYNLLM----RKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDE 845
P + YN+L+ R H +++K + M RG+ P+ T+ + HG+S+
Sbjct: 906 PGGVIIYNMLIFYMFRAKNHLEVNK---VLLEMQGRGVLPDETTFNFLVHGYSSSADYSS 962
Query: 846 AKRWVHEMLKKGFNP 860
+ R++ M+ KG P
Sbjct: 963 SLRYLSAMISKGMKP 977
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 146/337 (43%), Gaps = 13/337 (3%)
Query: 323 RLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTM 382
R +E + F + +GFV K Y +L+ R +++ + + E I ++V
Sbjct: 158 RFEEFHQVFDEMSKRDGFVNEKT-YEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAF 216
Query: 383 NAVLCFFCKLGMVDVALELFNSRS-QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
+ +L + C+ V+ A LF SR +FG + A ++ C G EA R +
Sbjct: 217 HGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDII 274
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
+ PD ++ T+ NAL ++ K+ + +L + R P+ + + ALC R+
Sbjct: 275 ASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 502 DGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL 558
+ + ++ + +Y ++ K R + L+ EM+ KG S V
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG---GSCSPNDVT 391
Query: 559 HCLLHMDNPRTRFFNL-LEMMTHGKPH--CDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
L + R++ ++ LE M K D++N + +K + RE++ M+R+G
Sbjct: 392 FSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSG 451
Query: 616 IMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVV 652
+ + + + + +I +AL +F ++ + +V
Sbjct: 452 LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
Query: 636 ISDALRFFNDI-----RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
+ +A RF+ DI R VV Y MI L K K A+EL M NP ++
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVS----YGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRRE 750
++ LC KR EA+ + + G NV+ ++S++ H C R E
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPD-----PNVVTYNSLLK----HLCKIRRTE 369
Query: 751 KEGEFLDSSMLTLIIGA-------FSGCLRVSYSIQE----LEELIAKCFPVDIYTYNLL 799
K E ++ + L G+ FS L+ S ++ LE + + YNL+
Sbjct: 370 KVWELVEE--MELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLM 427
Query: 800 MRKLTHHDMD-KACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
R D + K E++ M + GL P++ TY + HG G+ EA + EM+ KG
Sbjct: 428 FRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Query: 859 NPPENT 864
P T
Sbjct: 488 VPEPRT 493
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 142/342 (41%), Gaps = 17/342 (4%)
Query: 172 RYHDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQ 231
+ ++ L+ YA A K D A+ + R + G+D D +H LL L Y +
Sbjct: 179 KTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCR---YKHVEFAETL 235
Query: 232 ICMR----GYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCE 287
C R G + N+I + C G + EA+ ++ S +I L +
Sbjct: 236 FCSRRREFGCDIKAMNMI-LNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTK 294
Query: 288 SNRFERAVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKV 345
+ +A+EL + P I L R+ EALE FR+ + +G P V
Sbjct: 295 KGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISE-KGPDPNVV 353
Query: 346 RYNILIGRLLRENRLKDVYELL--MDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN 403
YN L+ L + R + V+EL+ M++ PN VT + +L + + VD+ LE
Sbjct: 354 TYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERM- 412
Query: 404 SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCREC 463
++++ ++ + + L + WD K + +G PD+RT++ + L +
Sbjct: 413 AKNKCEMTSDLYNLMFR-LYVQWDKEEK-VREIWSEMERSGLGPDQRTYTIRIHGLHTKG 470
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL 505
KI E + + +P T ++ RVED L
Sbjct: 471 KIGEALSYFQEMMSKGMVPEPRT-EMLLNQNKTKPRVEDKML 511
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 125/607 (20%), Positives = 229/607 (37%), Gaps = 80/607 (13%)
Query: 270 GKELHRSELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALE 329
+E ++E F C+ N+ + V L S Y I + G++ EA E
Sbjct: 270 AREFQKAE-EFFKKWSCDENKADSHVCLSS---------YTYNTMIDTYGKSGQIKEASE 319
Query: 330 FFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFF 389
F++ + EG VP V +N +I +L +V L+ M C P+ T N ++
Sbjct: 320 TFKRMLE-EGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC-APDTRTYNILISLH 377
Query: 390 CKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDR 449
K ++ A F GL P+ ++Y+ L+ +EA ++ D
Sbjct: 378 TKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
T S L +++ W +RF + S SA A E GYL +
Sbjct: 438 YTQSALTRMYVEAEMLEKSWSWF-----KRFHVAGNMSSEGYSANIDA-YGERGYLSEAE 491
Query: 510 -----LDKVTAR--FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
+V R Y MI + S + A L M G + +Y ++ L
Sbjct: 492 RVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 551
Query: 563 HMDNPRTRFFNLLEMMTHGK-----PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
D P L +M G P+C + +SF+ + ++A EV++ M I
Sbjct: 552 SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFV----KLGQLNMAEEVYKEMVEYNIE 607
Query: 618 TNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELC 677
+ +++ ++ + + A+ + ++ + + ++ L
Sbjct: 608 PDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL------------- 654
Query: 678 FEMLKVG-LNPSIECYEVLVQKLCSLKRY---YEAVNLVNVY-EKAGRRLTSFLGNVLLF 732
KVG L+ + Y L+Q C+ +Y Y + ++N+Y E++ R +F
Sbjct: 655 --YTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTSNCMINLYSERSMVRKAE-----AIF 706
Query: 733 HSMISPEVYHSCVDLRREKEGEFLDSSMLTLII--GAFSGCLRVSYSIQELEELIAKCFP 790
SM +R + EF + ML + G F +++ ++E++ L
Sbjct: 707 DSM-----------KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKIL------ 749
Query: 791 VDIYTYNLLMRKLT-HHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRW 849
D +YN ++ +A E F M G++P+ T+ + G +A R
Sbjct: 750 TDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRK 809
Query: 850 VHEMLKK 856
+ E+ KK
Sbjct: 810 IEEIRKK 816
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 115/295 (38%), Gaps = 10/295 (3%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++ ++ Y I+ + A L M G+ D Y+ L+ LA + + ++
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 234 MRGYESH-MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
GY S + VI K G+L AE +V E LI ++ +
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 293 RA---VELVSEFGTSLPLENA-YGVWIRGLVQGGRLDEALEFFRQKRDS--EGFVPCKVR 346
+A VE + E G +P + Y I+ + G LDEA +R+ S + P
Sbjct: 628 QAMSYVEAMKEAG--IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
Query: 347 YNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRS 406
N +I L E + E + D + N T +LC + K G + A ++
Sbjct: 686 SNCMI-NLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMR 744
Query: 407 QFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
+ + + ++Y ++ DG KEA + +G PD TF +L L +
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 19/263 (7%)
Query: 318 LVQGGRLDEALEFFRQ--KRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
L +G +F RQ +R++ V L+ L E +K+ M E
Sbjct: 137 LAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHC 196
Query: 376 PPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL--SPNYMAYKYLILTLC----WDGC 429
P++ N ++ C++G A L + G P+ Y LI + C GC
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 430 PK-------EAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMP 482
K EA R+ R G+ PD T++ L + C+ +I +L + + +P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 483 NSSTYSRFVSALCRAGRVEDGYLMRGDLDK----VTARFSYAKMIMGFIKSNRGDIAARL 538
N TY+ F+ +E M + K V +Y +I +++ R A L
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 539 LVEMKEKGYELKRSSYRHVLHCL 561
+VEM E G + +Y+ V L
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDAL 399
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 17/198 (8%)
Query: 281 LIGVLCESNRFERAVELVSEF---GTSLPLEN-AYGVWIRGLVQGG-----------RLD 325
+I LC F++A L+ + G P + Y + I + G R+
Sbjct: 206 IINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMW 265
Query: 326 EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAV 385
EA FR+ GFVP V YN LI + NR+ EL DM PN VT N+
Sbjct: 266 EANRMFREML-FRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSF 324
Query: 386 LCFFCKLGMVDVALELFNSRSQFGLS-PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTG 444
+ ++ ++ A+E+ + + G P Y LI L EA ++ G
Sbjct: 325 IRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
Query: 445 YFPDRRTFSTLANALCRE 462
P T+ + +AL E
Sbjct: 385 LVPREYTYKLVCDALSSE 402
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 201/484 (41%), Gaps = 87/484 (17%)
Query: 396 DVALELFN-SRSQFGLS--PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR-- 450
D +++LFN RS + S P ++LI LC G EA ++ P+R
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDG------LPERDVV 78
Query: 451 TFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDL 510
T++ + + + E +L D R+ N T++ VS R+ ++ ++ ++
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEM 135
Query: 511 DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTR 570
+ S+ MI G+ +S R D A L EM E+ S+ ++ L+ R R
Sbjct: 136 PERNV-VSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQ----RGR 186
Query: 571 F---FNLLEMMTHGKPHCDI--FNSFIDGAMHANKPDLAREVFELM-QRNGIMTNASSQI 624
NL E M P D+ + + +DG K D AR +F+ M +RN I NA
Sbjct: 187 IDEAMNLFERM----PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNA---- 238
Query: 625 LVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVG 684
++ Y ++ RI +A + F + + S +N MI G ++ + + A L M +
Sbjct: 239 -MITGYAQNNRIDEADQLFQVMPERDFAS---WNTMITGFIRNREMNKACGLFDRMPE-- 292
Query: 685 LNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSC 744
++ + ++ K EA+N+ + + G S NV + S++S +C
Sbjct: 293 --KNVISWTTMITGYVENKENEEALNVFSKMLRDG----SVKPNVGTYVSILS-----AC 341
Query: 745 VDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCF--PVDIYTYNLLMRK 802
DL EG Q++ +LI+K +I T LL
Sbjct: 342 SDLAGLVEG-------------------------QQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 803 LTHHDMDKACELFDR--MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
++ A ++FD +CQR L ++ M +++HG EA ++M K GF P
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDL----ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKP 432
Query: 861 PENT 864
T
Sbjct: 433 SAVT 436
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 123/598 (20%), Positives = 240/598 (40%), Gaps = 100/598 (16%)
Query: 280 FLIGVLCESNRFERAVELVSEFGTSLPLENAYGVW---IRGLVQGGRLDEALEFFRQKRD 336
+LIG LC+ + A +L LP E W I G ++ G + EA E F + D
Sbjct: 51 WLIGELCKVGKIAEARKLFD----GLP-ERDVVTWTHVITGYIKLGDMREARELF-DRVD 104
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
S V V + ++ LR +L L +M E N+V+ N ++ + + G +D
Sbjct: 105 SRKNV---VTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRID 157
Query: 397 VALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRR--TFST 454
ALELF+ + N +++ ++ L G EA + P R +++
Sbjct: 158 KALELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFER------MPRRDVVSWTA 207
Query: 455 LANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVT 514
+ + L + K+DE L D ER + +++ ++ + R+++ L +V
Sbjct: 208 MVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRIDEA----DQLFQVM 259
Query: 515 ARFSYAK---MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRF 571
+A MI GFI++ + A L M EK S+ ++ +
Sbjct: 260 PERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEAL 315
Query: 572 FNLLEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELM-----QRNGIMTNASSQI 624
+M+ G KP+ + S + +++ +L+ Q+N I+T+A
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSA---- 371
Query: 625 LVMKSYFRSRRISDALRFFND--IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLK 682
++ Y +S + A + F++ + + ++S +N MI A+E+ +M K
Sbjct: 372 -LLNMYSKSGELIAARKMFDNGLVCQRDLIS---WNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 683 VGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG--RRLTSFLGNVLLFHSMISPEV 740
G PS Y +NL+ AG + F +++ S+ E
Sbjct: 428 HGFKPSAVTY----------------LNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 741 YHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLM 800
+++C+ + G D + F C S +++ C
Sbjct: 472 HYTCLVDLCGRAGRLKD-------VTNFINCDDARLSRSFYGAILSACN----------- 513
Query: 801 RKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGF 858
H+++ A E+ ++ + G + + TY LM++ ++ +G+++EA +M +KG
Sbjct: 514 ---VHNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 37/262 (14%)
Query: 606 EVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIVGL 664
E+ E ++ M+ ++ Y ++ +A + F ++ ++ + L +N ++
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY 154
Query: 665 CKSDKADIALELCFEML-KVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLT 723
S K D+ EL E+ K+ + P I Y L++ LC EAV L++ E G +
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 724 SFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEE 783
N LL S + +G+F L I A +
Sbjct: 215 IVTFNTLLLSSYL---------------KGQF----ELGEEIWA---------------K 240
Query: 784 LIAKCFPVDIYTYNLLMRKLTHHDMDKA-CELFDRMCQRGLEPNRWTYGLMAHGFSNHGR 842
++ K +DI TYN + L + K LF + GL+P+ +++ M G N G+
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 843 KDEAKRWVHEMLKKGFNPPENT 864
DEA+ W E++K G+ P + T
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKAT 322
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 8/263 (3%)
Query: 246 VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSF--LIGVLCESNRFERAVELVSEFGT 303
+I K G E A+ + ++ RS LSF L+ S +F+ EL +E
Sbjct: 115 IISLYGKAGMFENAQKVFEEM--PNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPG 172
Query: 304 SLPLEN---AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRL 360
L ++ +Y I+ L + L EA+ + +++G P V +N L+ + +
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE-IENKGLKPDIVTFNTLLLSSYLKGQF 231
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+ E+ M E + ++ T NA L + LF GL P+ ++ +
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRF 480
I +G EA + GY PD+ TF+ L A+C+ + +L +R+
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 481 MPNSSTYSRFVSALCRAGRVEDG 503
+ +T + V L + + E+
Sbjct: 352 LVGQTTLQQLVDELVKGSKREEA 374
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 147/349 (42%), Gaps = 43/349 (12%)
Query: 286 CESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRL---DEALEFFRQKRD--SEGF 340
CES RF + + Y +R LV RL +E LE ++ RD EGF
Sbjct: 65 CESERFRTNIAV-------------YDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGF 111
Query: 341 VPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALE 400
R L G+ + V+E + N C ++++ NA+L + DV E
Sbjct: 112 A---ARIISLYGKAGMFENAQKVFEEMP--NRDC-KRSVLSFNALLSAYRLSKKFDVVEE 165
Query: 401 LFNS-RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTL--AN 457
LFN + + P+ ++Y LI LC EA +L G PD TF+TL ++
Sbjct: 166 LFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSS 225
Query: 458 ALCRECKI-DEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
L + ++ +E+W + +E+ + TY+ + L + ++ + G+L +
Sbjct: 226 YLKGQFELGEEIWAKM---VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLK 282
Query: 517 ---FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFN 573
FS+ MI G I + D A E+ + GY ++++ +L + + F +
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGD----FES 338
Query: 574 LLEMM--THGKPHC---DIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+E+ T K + +D + +K + A E+ ++ + N +
Sbjct: 339 AIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+G K Y+ILI RL + R+ D ++ DM+ + T + +LC + ++
Sbjct: 101 DGGFSRKNAYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEE 160
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A + S +S + AY Y + + C+DG + A V+R G PD R++ L
Sbjct: 161 AWRVVESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVL 220
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARF 517
CR K++ +L RR + T A G VE GY G L+ V A
Sbjct: 221 GACRAGKVEAAMAIL-----RRMEEDGVTVLYSTHAHVITGLVEGGYYALG-LEFVMA-- 272
Query: 518 SYAKMIMGFIKSNRGDIAARLLVEMKEKGYE 548
YA + + G +A +L+ K K YE
Sbjct: 273 -YAGKDLRLDSESFGFLAGKLV---KRKRYE 299
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 16/239 (6%)
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
D + F Y+ LI +EN ++DV +L M++ I P+++T A++ + K G
Sbjct: 376 DEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNF 435
Query: 396 DVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRS-------SSGTGYFPD 448
+ A E F + +GL P+ Y+ +IL G PK R+++ +S Y
Sbjct: 436 ERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMAL 495
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRG 508
R ++ + +A M D L + YS FV A +AG+V+
Sbjct: 496 LRAYAQMGDANGAAGISSSMQYASDGPL------SFEAYSLFVEAYGKAGQVDKAKSNFD 549
Query: 509 DLDKVTARFS---YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHM 564
++ K+ + A ++ + N D A RLL+++++ G E+ +Y ++ + ++
Sbjct: 550 EMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANL 608
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 146/360 (40%), Gaps = 12/360 (3%)
Query: 330 FFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFF 389
FF + F + YN+ + L + + + E+ ++M + + + +T + ++
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCA 231
Query: 390 CKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDR 449
+ + + A+E F + GL P+ + Y ++ G +E + + TG+ PD
Sbjct: 232 KRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDA 291
Query: 450 RTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG-----RVEDGY 504
FS L D + +L PN Y+ + A+ RAG R
Sbjct: 292 IAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNE 351
Query: 505 LMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH-CL-L 562
++ L + I G K+ A +L EMK K + + Y +L+ C +
Sbjct: 352 MLEAGLTPNEKTLTALVKIYG--KARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADI 409
Query: 563 HMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
++ R FN ++ +P + + ++ K + A E+FE M + G+ N
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMG 469
Query: 623 QILVMKSYFRSRRISDALRFFN-DIRHQVVVSTKLYNRM--IVGLCKSDKADIALELCFE 679
+++ +++RI D + F+ I+ V +L + ++ LC+S + + C E
Sbjct: 470 CTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLE 529
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 113/280 (40%), Gaps = 45/280 (16%)
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMR 507
+ T +TL R+ K+ E L A E + P S + A R G +ED Y +
Sbjct: 669 EEETIATLIAVYGRQHKLKEAKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGL- 726
Query: 508 GDLDKVTARFSYAKMIMGFIKS-----NRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL 562
F++S + G + +LV R +R H
Sbjct: 727 ------------------FMESAEKGCDPGAVTISILVNAL-----TNRGKHREAEHI-- 761
Query: 563 HMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASS 622
RT +E+ T G +N+ I + A K A E++E M +G+ + +
Sbjct: 762 ----SRTCLEKNIELDTVG------YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQT 811
Query: 623 QILVMKSYFRSRRISDALRFFNDIRHQ-VVVSTKLYNRMIVGLCKSDKADIALELCFEML 681
++ Y R ++ A+ F++ R + + K+Y MI+ K K AL L EM
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Query: 682 KVGLNPSIECYEVLVQKLCSLKR-YYEAVNLVNVYEKAGR 720
K G+ P Y ++V K+C+ R ++E L+ E+ GR
Sbjct: 872 KKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNGR 910
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 18/334 (5%)
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQIC 233
++ ++ GY G AL ++ RM G++LD F Y ++ + A + +
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 234 MR-GYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
R + H N +V + K G+ +EA A + K+L + L+ S
Sbjct: 314 RREDFSFHFDNSLVSLYY-KCGKFDEARAIFEKM--PAKDL--VSWNALLSGYVSSGHIG 368
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFR-QKRDSEGFVPCKVRYNILI 351
A + E L ++ + I GL + G +E L+ F KR EGF PC ++ I
Sbjct: 369 EAKLIFKEMKEKNIL--SWMIMISGLAENGFGEEGLKLFSCMKR--EGFEPCDYAFSGAI 424
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ + + + ++ NA++ + K G+V+ A ++F +
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL--- 481
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
+ +++ LI L G EA V G PDR T T+ A +D+
Sbjct: 482 -DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY 540
Query: 472 LDFALER--RFMPNSSTYSRFVSALCRAGRVEDG 503
D ++E R P + Y+R + LCR+G+ D
Sbjct: 541 FD-SMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 131/702 (18%), Positives = 280/702 (39%), Gaps = 53/702 (7%)
Query: 190 ALHLLGRMRFQGLDLDGF-GYHILLNSLAENNCYNAFDVIANQICMRGY----ESHMTNV 244
A+ MR G + F Y ++L L ++ + + ++C G+ +S+
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELC--GFHEFQKSYQVFN 214
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVS---EF 301
VI K+G ++ A + ++ G + + + L+G+ ++ E A S +F
Sbjct: 215 TVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKF 274
Query: 302 GTSLPLENAYGVWIRGLVQ---GGRLDEALEFFRQKRDSEGFVPCKVR-YNILIGRLLRE 357
G + E+AY I + + +E ++ +Q R V K+ + +++ ++
Sbjct: 275 G--IVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDR-----VRLKLENWLVMLNAYSQQ 327
Query: 358 NRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAY 417
+++ +L+ M PN++ N ++ + K+ ++ A LF+ GL P+ +Y
Sbjct: 328 GKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSY 387
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALC----RECKIDEMWDLLD 473
+ +I +EA + GY P+ TL N R+ I + D+
Sbjct: 388 RSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
Query: 474 FALERRFMPNSSTYSRFVSALCRAGRVE-DGYLMRGDLDKVT--ARFSYAKMIMGFIKSN 530
+ SS + A + G+++ +++G + S++ ++M ++K
Sbjct: 448 IGCQY-----SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Query: 531 RGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLL--EMMTHGKPHCDIF 588
D LL E K + + Y H+L C T + +M + + + I
Sbjct: 503 MVDDCLGLLREKKWRDSAFESHLY-HLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561
Query: 589 NSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN--DI 646
++ ID + A +++ ++ +G++ + +V++ Y ++ + +A D
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 647 RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYY 706
+ +V L+ M+ K D D L + + K G++ + E Y ++ C+ R
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN-CCA--RAL 678
Query: 707 EAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRR-------EKEGEFLDSS 759
L +E+ R F N + F+ ++ +VY ++ K +D
Sbjct: 679 PLDELSGTFEEMIR--YGFTPNTVTFNVLL--DVYGKAKLFKKVNELFLLAKRHGVVDVI 734
Query: 760 MLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKL-THHDMDKACELFDRM 818
II A+ + ++ + F V + YN L+ M+K + RM
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRM 794
Query: 819 CQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNP 860
+ P+ +TY +M + + G DE + E+ + G P
Sbjct: 795 KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 3/144 (2%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+GF YN L+ ++ +++ +L M ++ P+ T N ++ + + G +D
Sbjct: 762 DGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDE 821
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
++ + GL P+ +Y LI G +EA +++ G PD+ T++ L
Sbjct: 822 VADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Query: 458 ALCRECKIDEMWDLLDFALERRFM 481
AL R DE + + ++L + M
Sbjct: 882 ALRRN---DEFLEAIKWSLWMKQM 902
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 163/432 (37%), Gaps = 58/432 (13%)
Query: 166 SFPHRARYHDT----LVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC 221
SF + R + T LV+ Y G D L LL +++ + YH+L+ S E+
Sbjct: 479 SFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQ 538
Query: 222 YNAFDVIANQICMRGYES--HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELS 279
I N E H+T+ ++ + G EAE L SG L R S
Sbjct: 539 LTDAVKIYNHKMESDEEINLHITSTMIDIYTV-MGEFSEAEKLYLNLKSSGVVLDRIGFS 597
Query: 280 FLIGVLCESNRFERA---VELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRD 336
++ + ++ E A +E++ E +P + +R + Q L + L+ +
Sbjct: 598 IVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR-IYQKCDLQDKLQHLYYRIR 656
Query: 337 SEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD 396
G + YN +I R L ++ +M PN VT N +L + K +
Sbjct: 657 KSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFK 716
Query: 397 VALELF---------------NSRSQFGLSPNYMAYKYLILTLCWDG--CPKEAYRVL-- 437
ELF + +G + +Y I + +DG EAY L
Sbjct: 717 KVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 438 -------------------RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
+S+SG PD T++ + N + IDE+ D+L E
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSG----PDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDGY----LMRGDLDKVTARFSYAKMIMGFIKSNRGDI 534
P+ +Y+ + A G VE+ MRG + + + +Y ++ +++
Sbjct: 833 GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR-NIIPDKVTYTNLVTALRRNDEFLE 891
Query: 535 AARLLVEMKEKG 546
A + + MK+ G
Sbjct: 892 AIKWSLWMKQMG 903
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 182/445 (40%), Gaps = 22/445 (4%)
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
WD +LR SS + PD F+ L +A ++ + E L LE R++P
Sbjct: 157 WDSIILVCEWILRKSS---FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 213
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLD------KVTARFSYAKMIMGFIKSNRGDIAARLL 539
TY+ + A C AG +E ++ ++ K Y I G +K +G+ +
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMK-RKGNTEEAID 272
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLL--EMMTHG-KPHCDIFNSFIDGAM 596
V + K K ++ + L L+ ++ L EM +H KP+ + + ++
Sbjct: 273 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 332
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL 656
+ A E+FE +Q +G+ + +M+SY R+ A F+ ++H +
Sbjct: 333 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 392
Query: 657 -YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
YN M+ ++ A + EM ++G+ P+++ + +L+ + + +V
Sbjct: 393 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Query: 716 EKAGRRLTSFLGNVLL-FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAF--SGCL 772
+ G +F+ N +L + + + E D S ++I + +G L
Sbjct: 453 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 512
Query: 773 RVSYSIQEL-EELIAKCFPVDIYTYNLLMRKLTHHDMDKAC-ELFDRMCQRGLEPNRWTY 830
I+EL EL K F D+ T+ + + + C E+F+ M G P+ T
Sbjct: 513 E---RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 569
Query: 831 GLMAHGFSNHGRKDEAKRWVHEMLK 855
++ S+ + ++ + M K
Sbjct: 570 KVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA----VEL--- 297
++I ++ + +EAE+ L+ S + LI C + ERA VE+
Sbjct: 182 LLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNH 241
Query: 298 -VSEFGTSLPLENAYGVWIRGLVQ-GGRLDEALEFF-RQKRDSEGFVPCKVRYNILIGRL 354
VS + + NAY I GL++ G +EA++ F R KRD P YN++I
Sbjct: 242 HVSPKTIGVTVYNAY---IEGLMKRKGNTEEAIDVFQRMKRDR--CKPTTETYNLMINLY 296
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+ ++ ++L +M PN+ T A++ F + G+ + A E+F + GL P+
Sbjct: 297 GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 356
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
Y L+ + G P A + G PDR +++ + +A R
Sbjct: 357 YVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 183/461 (39%), Gaps = 65/461 (14%)
Query: 275 RSELSF--LIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFR 332
R +L++ ++ V S +E+AVEL E S AY + L+Q + E F
Sbjct: 52 RDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGA--KAYDSTMVKLLQ---VCSNKEGFA 106
Query: 333 QKRDSEGFV-----PCKVRY-NILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVL 386
+ R G+V V N LI R +L+ ++ M + N+ + N++L
Sbjct: 107 EGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSIL 162
Query: 387 CFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYF 446
+ KLG VD A+ L + GL P+ + + L+ G K+A VL+ G
Sbjct: 163 SSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLK 222
Query: 447 PDRRTFSTLANALCRECKI------------DEMW-------DLLDFALERRFMP----- 482
P + S+L A+ + +++W L+D ++ ++P
Sbjct: 223 PSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMV 282
Query: 483 -------NSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---FSYAKMIMGFIKSNRG 532
N ++ VS L A ++D + ++K + ++ + G+ +
Sbjct: 283 FDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKP 342
Query: 533 DIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSF 591
+ A ++ +MKEKG S+ + N R ++M G P+ ++
Sbjct: 343 EKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Query: 592 ID-----GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
+ +H+ K EV R ++ +A ++ Y +S + A+ F I
Sbjct: 403 LKILGCLSLLHSGK-----EVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGI 457
Query: 647 RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
+++ + S +N M++G + + + ML+ G+ P
Sbjct: 458 KNKSLAS---WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 160/398 (40%), Gaps = 57/398 (14%)
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
V +N L+ L LKD L++ M + I P+ +T N++ + LG + AL++
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECK 464
+ G++PN +++ + +G + A +V G P+ T STL L
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 465 IDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY-LMRGDLDKVTARFSYAKMI 523
+ ++ F L + + ++ + V ++G ++ + G +K A S+ M+
Sbjct: 412 LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLA--SWNCML 469
Query: 524 MGFIKSNRGD--IAA-------------------------RLLVEMKEKGYELKRSSYR- 555
MG+ RG+ IAA LV+ K ++L RS Y
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 556 --HVLHC-----LLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVF 608
+ HC LL ++ ++ M+ KP I+ +F+ +LA +
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSL-KPDATIWGAFLSSCKIHRDLELAEIAW 588
Query: 609 ELMQRNGIMT--NASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIV---- 662
+ +Q ++ N+++ ++++ Y R D R N +R+ V L++ + +
Sbjct: 589 KRLQ---VLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645
Query: 663 ------GLCKSDKADIALE---LCFEMLKVGLNPSIEC 691
G D+ DI E L EM K G P C
Sbjct: 646 HIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSC 683
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 162/395 (41%), Gaps = 69/395 (17%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAEN-NCYNAFDVIANQIC 233
++L GYA GKP+ AL ++G+M+ +G+ + + + + ++N N NA V I
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF---IK 386
Query: 234 MRGYESHMTNVIVIKHLCK-QGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFE 292
M+ E N + L K G L L+ SGKE+H G N
Sbjct: 387 MQ-EEGVGPNAATMSTLLKILGCLS--------LLHSGKEVH--------GFCLRKN--- 426
Query: 293 RAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALE-FFRQKRDSEGFVPCKVRYNILI 351
L+ + + L + YG + G L A+E F+ K S C + +
Sbjct: 427 ----LICDAYVATALVDMYG-------KSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMF 475
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFN-SRSQFGL 410
GR E + +L E + P+ +T +VL G+V + F+ RS++G+
Sbjct: 476 GR--GEEGIAAFSVML----EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
P ++ L G EA+ +++ S PD +T+ A CKI +
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPD----ATIWGAFLSSCKIHRDLE 582
Query: 471 LLDFALER--RFMP-NSSTYSRFVSALCRAGRVED----GYLMRGDLDKVTARFSYAKM- 522
L + A +R P NS+ Y ++ R ED LMR + +V +S+ ++
Sbjct: 583 LAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQID 642
Query: 523 -------IMGFIKSNRGDI---AARLLVEMKEKGY 547
G + GDI +L+ EMK+ GY
Sbjct: 643 QTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGY 677
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 182/445 (40%), Gaps = 22/445 (4%)
Query: 426 WDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSS 485
WD +LR SS + PD F+ L +A ++ + E L LE R++P
Sbjct: 135 WDSIILVCEWILRKSS---FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 486 TYSRFVSALCRAGRVEDGYLMRGDLD------KVTARFSYAKMIMGFIKSNRGDIAARLL 539
TY+ + A C AG +E ++ ++ K Y I G +K +G+ +
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMK-RKGNTEEAID 250
Query: 540 VEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLL--EMMTHG-KPHCDIFNSFIDGAM 596
V + K K ++ + L L+ ++ L EM +H KP+ + + ++
Sbjct: 251 VFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFA 310
Query: 597 HANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL 656
+ A E+FE +Q +G+ + +M+SY R+ A F+ ++H +
Sbjct: 311 REGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 370
Query: 657 -YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVY 715
YN M+ ++ A + EM ++G+ P+++ + +L+ + + +V
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 716 EKAGRRLTSFLGNVLL-FHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAF--SGCL 772
+ G +F+ N +L + + + E D S ++I + +G L
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 773 RVSYSIQEL-EELIAKCFPVDIYTYNLLMRKLTHHDMDKAC-ELFDRMCQRGLEPNRWTY 830
I+EL EL K F D+ T+ + + + C E+F+ M G P+ T
Sbjct: 491 E---RIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 547
Query: 831 GLMAHGFSNHGRKDEAKRWVHEMLK 855
++ S+ + ++ + M K
Sbjct: 548 KVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 245 IVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERA----VEL--- 297
++I ++ + +EAE+ L+ S + LI C + ERA VE+
Sbjct: 160 LLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNH 219
Query: 298 -VSEFGTSLPLENAYGVWIRGLVQ-GGRLDEALEFF-RQKRDSEGFVPCKVRYNILIGRL 354
VS + + NAY I GL++ G +EA++ F R KRD P YN++I
Sbjct: 220 HVSPKTIGVTVYNAY---IEGLMKRKGNTEEAIDVFQRMKRDR--CKPTTETYNLMINLY 274
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
+ ++ ++L +M PN+ T A++ F + G+ + A E+F + GL P+
Sbjct: 275 GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV 334
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
Y L+ + G P A + G PDR +++ + +A R
Sbjct: 335 YVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 114/651 (17%), Positives = 220/651 (33%), Gaps = 59/651 (9%)
Query: 114 GDILSCLKFFDWAGRQPRFYHTRTTFVAIFRILSCARLRPLVFDFLRDFRSCSFPHRARY 173
GD L+ F + RQ + + +L L + + S
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 174 HDTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNC-YNAFDVIANQI 232
+ L+ Y G+ + +L LL RM+ + + Y+ ++N+ A + + ++
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 233 CMRGYESHMTNVIVIKHLCK-QGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF 291
G + + + C +G +EAE + G + S L+ + R
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 292 ERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILI 351
E+ +L+ E S G +P YN+L+
Sbjct: 299 EKVCDLLGEMA----------------------------------SGGSLPDITSYNVLL 324
Query: 352 GRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLS 411
+ +K+ + M PN T + +L F + G D +LF
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
Query: 412 PNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDL 471
P+ Y LI G KE + PD T+ + A + ++ +
Sbjct: 385 PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKI 444
Query: 472 LDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTARFS---YAKMIMGFIK 528
L + +P+S Y+ + A +A E+ + + +V + S + ++ F +
Sbjct: 445 LQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFAR 504
Query: 529 SNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIF 588
+ +L + + G R ++ + ++M K CD
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME---KSRCDPD 561
Query: 589 NSFIDGAMH----ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFN 644
++ + A D RE FE M+ + I+ + +++ Y ++ R D
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
Query: 645 D-IRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKV-GLNPSIECYEVLVQKLCSL 702
+ + ++V ++ +MI G D +E + L G I Y L+ L L
Sbjct: 622 EMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWL 681
Query: 703 KRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEG 753
+ A ++N K G F N L++ VD+ R EG
Sbjct: 682 GQKERAARVLNEATKRGLFPELFRKNKLVW-----------SVDVHRMSEG 721
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 98/492 (19%), Positives = 180/492 (36%), Gaps = 50/492 (10%)
Query: 389 FCKLGMVDVALELFN-SRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
F G +L LF + Q PN Y +I L +G + V G
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR 174
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYL-- 505
+++ L NA R + + +LLD + P+ TY+ ++A R G +G L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 506 ---MRGD---LDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLH 559
MR + D VT Y ++ GD A + M + G ++Y H++
Sbjct: 235 FAEMRHEGIQPDIVT----YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 560 CLLHMDNPRTRFFNLLEMMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMT 618
+ L EM + G P +N ++ + A VF MQ G
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 619 NASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRMIVGLCKSDKADIALELC 677
NA++ +++ + +S R D + F +++ YN +I + + L
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 678 FEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMIS 737
+M++ + P +E YE ++ A ++E A + L N ++ S
Sbjct: 411 HDMVEENIEPDMETYEGIIF----------ACGKGGLHEDARKILQYMTANDIV----PS 456
Query: 738 PEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
+ Y ++ F +++ + AF+ V + I T++
Sbjct: 457 SKAYTGVIE-------AFGQAALYEEALVAFNTMHEVGSN-------------PSIETFH 496
Query: 798 LLMRKLTHHDMDKACE-LFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKK 856
L+ + K E + R+ G+ NR T+ + G+ +EA + +M K
Sbjct: 497 SLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556
Query: 857 GFNPPENTRNVI 868
+P E T +
Sbjct: 557 RCDPDERTLEAV 568
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 22/221 (9%)
Query: 296 ELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
E+ E G S P +Y V + G + EA + + + + G V V YN +IG L
Sbjct: 270 EMEEEVGCS-PNVYSYNVLMEAYCARGLMSEAEKVWEEMK-VRGVVYDIVAYNTMIGGLC 327
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM 415
+ EL DM I +T ++ +CK G VD L ++ + G + +
Sbjct: 328 SNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGL 387
Query: 416 AYKYLILTLCWDGCPKEAYRVLRSSS-------GTGYFPDRRTFSTLANALCRECKIDEM 468
+ L+ LC D ++ RV+ ++ ++P R + L LC + K+D
Sbjct: 388 TIEALVEGLCDD---RDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRA 444
Query: 469 WDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGD 509
++ + + F P+ TY F+ DGY + GD
Sbjct: 445 LNIQAEMVGKGFKPSQETYRAFI----------DGYGIVGD 475
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 13/231 (5%)
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNS-RSQFGLSPNYMAYKYLILTLCWDGCPKEA 433
I PN T N+++ F + G ++ ++ + G SPN +Y L+ C G EA
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 434 YRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLL-DFALERRFMPNSSTYSRFVS 492
+V G D ++T+ LC ++ + +L D L + TY V+
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL-KGIECTCLTYEHLVN 359
Query: 493 ALCRAGRVEDGYLMRGDLDKV---TARFSYAKMIMGFIKSNRGD--IAARLLVE--MKEK 545
C+AG V+ G ++ ++ + + ++ G G + A +V+ ++E
Sbjct: 360 GYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREA 419
Query: 546 GYELKRSSYRHVLHCLLHMDNPRTRFFNL-LEMMTHG-KPHCDIFNSFIDG 594
+ R+ Y ++ L D R N+ EM+ G KP + + +FIDG
Sbjct: 420 MFYPSRNCYELLVKRLCE-DGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G L +A E F+ R G +P YN+L+ + L Y+L M E + P++ +
Sbjct: 169 GYLQKAFELFKSSR-LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
++ FC+ G V+ A+EL + G P+ + LI LC G E + L
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMI 283
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
G+ P + L C K++E D+++ ++ +S T+ + +C E
Sbjct: 284 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 343
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 10/214 (4%)
Query: 355 LRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNY 414
L E L Y++L + N T P ++ + VL G + A ELF S G+ PN
Sbjct: 134 LPEKVLSTFYKML-EFNFTPQPKHLNRILDVLV--SHRGYLQKAFELFKSSRLHGVMPNT 190
Query: 415 MAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDF 474
+Y L+ C + AY++ PD ++ L CR+ +++ +LLD
Sbjct: 191 RSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 475 ALERRFMPNSSTYSRFVSALCRAGRVEDG--YLMRGDLDKVTARFSYAK-MIMGFIKSNR 531
L + F+P+ + + LC G ++G YL + FS + ++ GF +
Sbjct: 251 MLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 306
Query: 532 GDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMD 565
+ A ++ + + G L ++ V+ + + D
Sbjct: 307 VEEACDVVEVVMKNGETLHSDTWEMVIPLICNED 340
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 169/432 (39%), Gaps = 64/432 (14%)
Query: 104 LRVLRHGGDDGDILS--CLKFFDWAGRQPRFYH----TRTTFVAIFRILSCAR------- 150
L LR D DI S C+ F++ P + RT FR+LS R
Sbjct: 47 LSTLRRILSDPDIKSWKCISLFNFILENPSLFSFQPDLRTHLSLTFRVLSERRFSYAKEL 106
Query: 151 LRPLVFD-FLR-----------DFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMR 198
L+P+ D LR D C R+ +++++ Y+ GK + + M+
Sbjct: 107 LKPVAIDDILRYPFNVIVSSVIDECGCEKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMK 166
Query: 199 FQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGRLEE 258
+ +D E C H+ N+ C Q +E
Sbjct: 167 NNEVKID------------EKTC----------------TLHLLNL----KRCDQ--MEL 192
Query: 259 AEAHLNGLVGSGKELHRS-ELSFLIGVLCESNRFERAVELVSEFGTSLPLENAYGVWIRG 317
A + +V SG ++ L+ ++ VLC + RA ELV E G ++ A V +
Sbjct: 193 ARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVK-ANIVTFKS 251
Query: 318 LVQG--GRLD-EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
++ R D E L+ + + E + Y +LI ++++ L++ M++
Sbjct: 252 MIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKK 311
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
+ N ++ + + G+V+ +EL++ S G++PN Y L+ LC G EA
Sbjct: 312 LRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAM 371
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
L + D +STL+ R ID+ +++ + F+P ++ R +L
Sbjct: 372 SFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICERLADSL 431
Query: 495 CRAGRVEDGYLM 506
R E L+
Sbjct: 432 FEVNRKEAQMLI 443
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 50/285 (17%)
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR 647
FNS I K EVFE M+ N + + + L + + R ++ A FF+ +
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 648 HQVVVSTKLYNRMIVG--LCKSDKADIALELCFEM-LKVGLNPSIECYEVLVQKLCSLKR 704
+ +Y+ +V LC + + A EL EM L G+ +I ++ ++ C +KR
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIG--CCVKR 259
Query: 705 Y-YEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTL 763
+ +E ++LV M EKE LD +
Sbjct: 260 WDFEELDLV-------------------LKLM--------------EKESVMLDLDSYKV 286
Query: 764 IIGAFSGCLRVSY-SIQELEELIA----KCFPVDIYTYNLLMRKLTHHDM-DKACELFDR 817
+I F+ SY ++E E L+ K V+ Y YNL+M + + +K EL+
Sbjct: 287 LIDGFT-----SYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSE 341
Query: 818 MCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPE 862
M RG+ PN+ TY ++ +G G+ EA +++E+ F E
Sbjct: 342 MSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDE 386
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 18/248 (7%)
Query: 476 LERRFMPNSSTYSRFVSALCRAGRVEDGYLM------RGDLDKVTARFSYAKMIMGFIKS 529
L + F P+S Y+ + + GRV D M + D + +Y ++ F+ +
Sbjct: 406 LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA 465
Query: 530 NRGDIAARLLVEMKEKGYELKRSSYRHVL--HC-LLHMDNPRTRFFNLLEMMTHG---KP 583
D A ++L EM G R +Y +L +C L +D R +LL MT +P
Sbjct: 466 GLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQID----RAEDLLREMTEDAGIEP 521
Query: 584 HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFF 643
+N IDG + + A F M+ GI S +MK++ S + A R F
Sbjct: 522 DVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 644 NDIRHQVVVSTKL--YNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
+++ + V L +N ++ G C+ + A + M + G P++ Y L +
Sbjct: 582 DEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 702 LKRYYEAV 709
++ +A+
Sbjct: 642 ARKPGDAL 649
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 3/205 (1%)
Query: 304 SLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
S P E Y + V G +D A + + G ++ YN+L+ ++ ++
Sbjct: 448 SHPDEVTYTTVVSAFVNAGLMDRARQVLAEMA-RMGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 364 YELLMDMNETC-IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLIL 422
+LL +M E I P++V+ N ++ + AL FN G++P ++Y L+
Sbjct: 507 EDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 423 TLCWDGCPKEAYRVLRSSSGTGYFP-DRRTFSTLANALCRECKIDEMWDLLDFALERRFM 481
G PK A RV D ++ L CR I++ ++ E F
Sbjct: 567 AFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFY 626
Query: 482 PNSSTYSRFVSALCRAGRVEDGYLM 506
PN +TY + + +A + D L+
Sbjct: 627 PNVATYGSLANGVSQARKPGDALLL 651
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 111/254 (43%), Gaps = 11/254 (4%)
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLV-GSGKELHRSELSF--LIGVLCESNRFERAVELVSE 300
++K K GR+ + L + + H E+++ ++ + +RA ++++E
Sbjct: 418 TTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAE 477
Query: 301 FG-TSLPLEN-AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
+P Y V ++G + ++D A + R+ + G P V YNI+I + +
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR-SQFGLSPNYMAY 417
+M I P ++ ++ F G +A +F+ + + + +A+
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 418 KYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDE---MWDLLD- 473
L+ C G ++A RV+ G++P+ T+ +LAN + + K + +W +
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Query: 474 -FALERRFMPNSST 486
A++++ P+ S+
Sbjct: 658 RCAVKKKEAPSDSS 671
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 24/277 (8%)
Query: 237 YESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVE 296
+ +T V+ G ++ A L + G +R + L+ C+ + +RA +
Sbjct: 449 HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED 508
Query: 297 LVSEFGTSLPLEN---AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGR 353
L+ E +E +Y + I G + AL FF + R + G P K+ Y L+
Sbjct: 509 LLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMR-TRGIAPTKISYTTLMKA 567
Query: 354 LLRENRLKDVYELLMDM-NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSP 412
+ K + +M N+ + +++ N ++ +C+LG+++ A + + + G P
Sbjct: 568 FAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYP 627
Query: 413 NYMAYKYLILTLCWDGCPKEAYRVLR----------------SSSGTG---YFPDRRTFS 453
N Y L + P +A + + SSS PD
Sbjct: 628 NVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLD 687
Query: 454 TLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRF 490
TLA+ R + +++ E PN + Y +
Sbjct: 688 TLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 11/224 (4%)
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTA--RFSYAKMIMGFIKSNRGDI--A 535
++ N T +R V LC+ VE+ + L + +Y MI GF + GD+ A
Sbjct: 177 YLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGF--CDVGDLIEA 234
Query: 536 ARLLVEMKEKGYELKRSSYRHVLHCLLHMD--NPRTRFFNLLEMMTHGKPHCDIFNSFID 593
A+L M ++G+++ + + ++ LL + + ++ F ++ G + ID
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 594 GAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVS 653
+ D+AR+VF+ M+ G+ + + ++ RR+ +A + + +
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDI-- 352
Query: 654 TKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
+Y+ +I GL K +A A E+ +M++ G P + Y +L+Q
Sbjct: 353 -SIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ 395
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 4/216 (1%)
Query: 281 LIGVLCESNRFERAVELVSEFGTSL--PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
+I VLCES + +V+E P ++G+ I G + + DE + R D
Sbjct: 188 MIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRM-MDEF 246
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G YNI+I L + + + L+ + + PN VT + ++ FC +D A
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEA 306
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
+ LF G P+ Y LI LC G + A + R S + P L N
Sbjct: 307 MNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNG 366
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
L K+DE +L+ E +F N ++ +AL
Sbjct: 367 LASRSKVDEAKELIAVVKE-KFTRNVDLWNEVEAAL 401
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 3/210 (1%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G P YN +I L Y ++ +M I P + ++ F K D
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
++ +FG+ Y +I LC EA ++ P+ T+S L +
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLM-RGDLDK-VTAR 516
C E +DE +L + + + P+S Y + LC+ G E ++ R ++K
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 517 FSYAK-MIMGFIKSNRGDIAARLLVEMKEK 545
FS K ++ G ++ D A L+ +KEK
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 118/280 (42%), Gaps = 10/280 (3%)
Query: 430 PKEAYRVLRSSS-GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYS 488
P + RS+S Y DR FS L RE + LLD ++ + P S +++
Sbjct: 55 PDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFA 114
Query: 489 -RFVSALCRAGRVEDGYLMRGDLDKV----TARFSYAKMIMGFIKSNRGDIAARLLVEM- 542
R + RA ++ +L++ T + S ++ + + A R+ +EM
Sbjct: 115 VRAIILYGRANMLDRSIQTFRNLEQYEIPRTVK-SLNALLFACLMAKDYKEANRVYLEMP 173
Query: 543 KEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKP 601
K G E +Y ++ L + + + + EM KP F IDG K
Sbjct: 174 KMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKF 233
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRH-QVVVSTKLYNRM 660
D R+V +M G+ ++ ++++ + ++ ++A + + ++ ++ Y+ +
Sbjct: 234 DEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLL 293
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLC 700
I G C + D A+ L M+ G P ECY L+ LC
Sbjct: 294 IHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 583 PHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRF 642
P +NS IDG ++ D A+ + + M G + + ++ Y +++R+ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 643 FNDI-RHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCS 701
F ++ R +V +T Y +I G C+ D A +L EM+ G+ P + ++ LCS
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 702 LKRYYEAVNLVNVYEKA 718
K +A ++ +K+
Sbjct: 128 KKELRKAFAILEDLQKS 144
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%)
Query: 342 PCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALEL 401
P + YN +I +++R+ D +L M P++VT + ++ +CK VD +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 402 FNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCR 461
F + G+ N + Y LI C G A +L G PD TF + LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 462 ECKIDEMWDLLD 473
+ ++ + + +L+
Sbjct: 128 KKELRKAFAILE 139
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 305 LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVY 364
P Y I G + R+D+A S+G P V ++ LI + R+ +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMA-SKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 365 ELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTL 424
E+ +M+ I N VT ++ FC++G +D A +L N G++P+Y+ + ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 425 CWDGCPKEAYRVLR 438
C ++A+ +L
Sbjct: 126 CSKKELRKAFAILE 139
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%)
Query: 375 IPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAY 434
I P +T N+++ FCK VD A + +S + G SP+ + + LI C
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 435 RVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSAL 494
+ G + T++TL + C+ +D DLL+ + P+ T+ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 495 CRAGRVEDGYLMRGDLDK 512
C + + + DL K
Sbjct: 126 CSKKELRKAFAILEDLQK 143
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 208/554 (37%), Gaps = 117/554 (21%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G LDEA F + V C N ++ ++ R+ + + L +M P N+V+
Sbjct: 91 GYLDEARVLF-EVMPERNIVTC----NAMLTGYVKCRRMNEAWTLFREM-----PKNVVS 140
Query: 382 MNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSS 441
+L C G + A+ELF+ + N +++ L+ L +G ++A +V +
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPE----RNVVSWNTLVTGLIRNGDMEKAKQVFDA-- 194
Query: 442 GTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE 501
P R S NA+ + ++ + N T++ V CR G V
Sbjct: 195 ----MPSRDVVSW--NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVR 248
Query: 502 DGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEK---------------- 545
+ Y + ++ + S+ MI GF + A L +EMK+
Sbjct: 249 EAYRLFCEMPERNI-VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAY 307
Query: 546 -----GYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTH-GKPHCDIFNSFIDGAMHAN 599
G E +R + LH + N E + H G+ + + + + A+
Sbjct: 308 ACGGLGVEFRRLGEQ--LHAQV--------ISNGWETVDHDGRLAKSLVHMYASSGLIAS 357
Query: 600 KPDLAREVFELMQ---------RNGIMTNASSQILVMKS-------------YFRSRRIS 637
L E F+L +NG + A + +KS Y + +S
Sbjct: 358 AQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVS 417
Query: 638 DALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQ 697
A F + + V+ + MI GL +++ A L +M++ GL P Y VL+
Sbjct: 418 RAFGLFQKLHDKDGVT---WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Query: 698 KLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLD 757
+ + ++ V K + +++L +S++S +Y C
Sbjct: 475 SAGATSNLDQGKHIHCVIAKT---TACYDPDLILQNSLVS--MYAKC------------- 516
Query: 758 SSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYNLLMRKLTHHDM-DKACELFD 816
GA I++ E+ AK D ++N ++ L+HH + DKA LF
Sbjct: 517 --------GA----------IEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 817 RMCQRGLEPNRWTY 830
M G +PN T+
Sbjct: 559 EMLDSGKKPNSVTF 572
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/434 (19%), Positives = 178/434 (41%), Gaps = 35/434 (8%)
Query: 321 GGRLDEALEFFRQKR----DSEGFVP-CKVRYNILIGRLLRENRLKDVYELLMDMNETCI 375
G ++DE++ F + +S G P YN RLLR+ R+KD LL D+++
Sbjct: 376 GHQIDESMPQFPARNFELHNSNGRSPETSDAYN----RLLRDGRIKDCISLLEDLDQR-- 429
Query: 376 PPNMVTMNAV--LCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEA 433
+++ M+ + FF E F ++ L+P + +++++C E
Sbjct: 430 --DLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLILNPTMSTFN-MLMSVCASSQDIEG 485
Query: 434 YR-VLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVS 492
R VLR +G D + ++TL ++ + K+D M+++ N T+ +
Sbjct: 486 ARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALID 545
Query: 493 ALCRAGRVEDGYLMRGDLDKVTA---RFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
RAG+V + G L R + +I +S D A +L EMK + + +
Sbjct: 546 GCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPI 605
Query: 550 KRSSYRHVLHCLL--------HMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKP 601
H+ L ++ + + + + G P +++ ++ +
Sbjct: 606 DPD---HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP--EVYTIAVNSCSKSGDW 660
Query: 602 DLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVV-VSTKLYNRM 660
D A +++ M+ + + ++ ++ + +A D + Q + + T Y+ +
Sbjct: 661 DFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL 720
Query: 661 IVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGR 720
+ C + ALEL ++ + L P+I L+ LC + +A+ ++ + G
Sbjct: 721 MGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Query: 721 RLTSFLGNVLLFHS 734
+ + ++L+ S
Sbjct: 781 KPNTITYSMLMLAS 794
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 129/319 (40%), Gaps = 24/319 (7%)
Query: 145 ILSCARLRPL--VFDFLRDFRSCSFPHRARYHDTLVVGYAIAGKPDIALHLLGRMRFQGL 202
I SCA+ + +F+ + L+ G A AG+ A G +R + +
Sbjct: 509 ISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNV 568
Query: 203 DLDGFGYHILLNSLAENNCYN-AFDVIANQICMRGY-----ESHMTNVIVIKHLCKQGRL 256
D ++ L+++ ++ + AFDV+A M+ H++ ++K C G++
Sbjct: 569 KPDRVVFNALISACGQSGAVDRAFDVLAE---MKAETHPIDPDHISIGALMKACCNAGQV 625
Query: 257 EEAEA-----HLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLEN 309
E A+ H G+ G+ E++ + + +S ++ A + + P E
Sbjct: 626 ERAKEVYQMIHKYGIRGT-PEVY----TIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEV 680
Query: 310 AYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMD 369
+ I LDEA Q S+G + Y+ L+G K EL
Sbjct: 681 FFSALIDVAGHAKMLDEAFGIL-QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
+ + P + TMNA++ C+ + A+E + GL PN + Y L+L
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 430 PKEAYRVLRSSSGTGYFPD 448
+ ++++L + G G P+
Sbjct: 800 FEVSFKLLSQAKGDGVSPN 818
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 132/323 (40%), Gaps = 11/323 (3%)
Query: 186 KPDIALHLLGRMRFQGL-DLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTN- 243
K ++ +L +R+Q + + +L+ + + +N + + + + G ++ +
Sbjct: 125 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 184
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVE----LVS 299
+++ + G+ AEA + SG E ++ E ++F+ A E L+
Sbjct: 185 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 244
Query: 300 EFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
E + L P + Y + I + G ++A + F +G V YN L+ E
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF-SSMVGKGVPQSTVTYNSLMSF---ET 300
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
K+V ++ M + I P++V+ ++ + + + AL +F G+ P + AY
Sbjct: 301 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
L+ G ++A V +S FPD +++T+ +A ++
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 420
Query: 479 RFMPNSSTYSRFVSALCRAGRVE 501
F PN TY + +A VE
Sbjct: 421 GFEPNIVTYGTLIKGYAKANDVE 443
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 132/323 (40%), Gaps = 11/323 (3%)
Query: 186 KPDIALHLLGRMRFQGL-DLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHMTN- 243
K ++ +L +R+Q + + +L+ + + +N + + + + G ++ +
Sbjct: 118 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 177
Query: 244 VIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVE----LVS 299
+++ + G+ AEA + SG E ++ E ++F+ A E L+
Sbjct: 178 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 237
Query: 300 EFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLREN 358
E + L P + Y + I + G ++A + F +G V YN L+ E
Sbjct: 238 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV-GKGVPQSTVTYNSLMSF---ET 293
Query: 359 RLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYK 418
K+V ++ M + I P++V+ ++ + + + AL +F G+ P + AY
Sbjct: 294 SYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Query: 419 YLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALER 478
L+ G ++A V +S FPD +++T+ +A ++
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 413
Query: 479 RFMPNSSTYSRFVSALCRAGRVE 501
F PN TY + +A VE
Sbjct: 414 GFEPNIVTYGTLIKGYAKANDVE 436
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 14/236 (5%)
Query: 275 RSELSF--LIGVLCESNRFERAVELVSEF----GTSLPLENAYGVWIRGLVQGGRLDEAL 328
R+ +SF L+ S+ FER +L EF P + +YG+ I+ G+ ++A+
Sbjct: 135 RTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAM 194
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM-NETCIPPNMVTMNAVLC 387
E R + +G + + ++G L + + + L ++M N+ C N V N L
Sbjct: 195 EIMRD-MEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTV-YNVRLM 252
Query: 388 FFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
K V EL S GL P+ ++Y YL+ C G EA +V P
Sbjct: 253 NAAKESPERVK-ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----P 307
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+ TF TL LC D+ + + +P+ T L + R+ED
Sbjct: 308 NAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%)
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
L V L M + P+ +N ++ + K VD A+ +F + +G PN Y Y
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 420 LILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERR 479
L+ +C G + + G P+ + L +L E ++DE +++ L
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 480 FMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDK 512
P+ TY+ ++ LCR GR + M + K
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEEWKK 356
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 278 LSFLIGVLCESNRFERAVELVSEFG--TSLPLENAYGVWIRGLVQGGRLDEALEFFRQKR 335
L+ +I + + A+ + E S P Y ++G+ + GR+ + L F+++ +
Sbjct: 226 LNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 336 DSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMV 395
+G VP Y +LI L E RL + E++ DM + P+M+T N VL C+ G
Sbjct: 286 -VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRG 344
Query: 396 DVALEL 401
ALE+
Sbjct: 345 SEALEM 350
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M + P++VT N+++ +CK ++ A +L + + +P+ + Y +I L G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
P +A VL+ G +PD ++ C ++ + L+D +++ PN++TY+
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 490 FVSALCRA---GRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
F L A GR + Y+ + + S +I F + + D+A RL +M KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 547 Y 547
+
Sbjct: 417 F 417
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 138/333 (41%), Gaps = 22/333 (6%)
Query: 326 EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM---NETCIPPNMVTM 382
+ LEF+R GF + ++ L R + ++ELL++ + + I P TM
Sbjct: 90 QTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPR--TM 147
Query: 383 NAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM---AYKYLILTLCWDGCPKEAYRVLRS 439
VL KL V +E F + L P++ + L+ TLC + +A V S
Sbjct: 148 QVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEKSMTDARNVYHS 205
Query: 440 SSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGR 499
+ PD +TF+ L + + + ++ + + P+ TY+ + C+
Sbjct: 206 LKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDRE 261
Query: 500 VEDGYLMRGDL---DKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRH 556
+E Y + + ++ +Y +I G + D A +L EMKE G ++Y
Sbjct: 262 IEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNA 321
Query: 557 VLH--CLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQR 613
+ C+ + + EM+ G P+ +N F AN + E++ M
Sbjct: 322 AIRNFCIARRLGDADKLVD--EMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLG 379
Query: 614 NGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
N + N S + ++K + R ++ A+R + D+
Sbjct: 380 NECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 118/283 (41%), Gaps = 17/283 (6%)
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
V YN + L R N + + + ++ +M ++ T V F K M+ ++L+
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKE----AYRVLRSSSGTGYFPDRRTFSTLANALC 460
P+ L+ L G P +RV R TG + + + +L
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLS--GSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLT 381
Query: 461 RECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR---- 516
+ DE ++ + P++ TYS+ V LC+A R+E+ RG LD++ A+
Sbjct: 382 SVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA---RGVLDQMEAQGCFP 438
Query: 517 --FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNL 574
++ +I G K+N D A M EKG+++ + ++ + + L
Sbjct: 439 DIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFL 498
Query: 575 LEMMTHG--KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
+EM+ + KP + ID + K + A ++ ++M++
Sbjct: 499 MEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 148/382 (38%), Gaps = 51/382 (13%)
Query: 100 ETFVLRVLRHGGDDGDILSCLKFFDWAGRQPR---FYHTRTTFVAIFRILSCARLRPLVF 156
+ FV+RVL+ + L L FF W G + H+ T+ A R+L+ +
Sbjct: 226 DNFVIRVLKELREHP--LKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFW 283
Query: 157 DFLRDFRSCSF---------------------------------PHRARYHDTLVVGYAI 183
+ + ++ + P + D ++ +
Sbjct: 284 SVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYL 343
Query: 184 AGKPDIALHLLGRMRFQ----GLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYE- 238
+G P+ L L+ R+ + G L Y + SL ++ + I + GYE
Sbjct: 344 SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEP 403
Query: 239 SHMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELV 298
++T ++ LCK RLEEA L+ + G + LI C++N ++A+
Sbjct: 404 DNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACF 463
Query: 299 S---EFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLL 355
+ E G + N V I G V + + A F + + P + Y +LI +LL
Sbjct: 464 ANMLEKGFDID-SNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLL 522
Query: 356 RENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYM 415
+ + ++ +LL M + P + L F L L++ +S+ SP++
Sbjct: 523 KIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKD----SPSFA 578
Query: 416 AYKYLILTLCWDGCPKEAYRVL 437
AY ++I +G +A +L
Sbjct: 579 AYFHVIEAFYREGRLTDAKNLL 600
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 178/440 (40%), Gaps = 61/440 (13%)
Query: 305 LPLENAYGVWIRGLVQGGRLDEAL---EFFRQKRDSEGFV--PCKVRYNILIGRLLRENR 359
LPL+ + I+G + RL A+ ++ ++K+ G V P YN L+G +
Sbjct: 144 LPLQ-VFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAM---RG 199
Query: 360 LKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKY 419
+ ++L DM E I PN+VT N ++ + + G AL + + + G PN + Y
Sbjct: 200 FGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYST 259
Query: 420 LILTL--CWDGCP--------KEAYRVLRSSSGTGYFPDRRTFSTLANALCREC-KIDEM 468
+L DG +E Y + GY + F L N + R C ++
Sbjct: 260 ALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFE-FVKLENFIGRICYQVMRR 318
Query: 469 WDLLDFALERRFM------------PNSSTYSRFVSALCRAGRVEDGYLMRGDLDK-VTA 515
W + D R + P+ + R + A R E+ Y++ +L K +
Sbjct: 319 WLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTR----EEHYIVGKELYKRIRE 374
Query: 516 RFSYAKM--------IMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVL---HCLLHM 564
RFS + +MG K+ + A + ++ ++G E SY V+ + LL
Sbjct: 375 RFSEISLSVCNHLIWLMG--KAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSA 432
Query: 565 DNPR------TRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIM 617
+ R R N +E G KP +N+ + A++ A ++F+ M NG
Sbjct: 433 ASKRGIWRWGVRLLNKME--DKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEK 490
Query: 618 TNASSQILVMKSYFRSRRISDALRFFND-IRHQVVVSTKLYNRMIVGLCKSDKADIALEL 676
S ++ + + + +A R +N I+ + + Y M L K ++ L
Sbjct: 491 PTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTL 550
Query: 677 CFEMLKVGLNPSIECYEVLV 696
EM G+ PS+ + ++
Sbjct: 551 LKEMASKGIEPSVVTFNAVI 570
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Query: 306 PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYE 365
P +YG + L +G DEA + G P Y + L + + +
Sbjct: 491 PTVISYGALLSALEKGKLYDEAFRVWNHMIKV-GIEPNLYAYTTMASVLTGQQKFNLLDT 549
Query: 366 LLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLC 425
LL +M I P++VT NAV+ + G+ VA E F+ + PN + Y+ LI L
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Query: 426 WDGCPKEAYRVLRSSSGTG 444
D P+ AY + + G
Sbjct: 610 NDAKPRLAYELHVKAQNEG 628
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 522 MIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFF-------NL 574
+I G+ + + D A RL EM G+E+ +Y +L C+ + + F L
Sbjct: 251 LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVL 310
Query: 575 LEMMTHGKP-HCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRS 633
LEM G P + + FN I+ + + A +F M G +A + +++++S +++
Sbjct: 311 LEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQA 370
Query: 634 RRISDALRFFNDIR---HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIE 690
RI + + ++ + +++ K Y + LC ++ + A+ + M G P I+
Sbjct: 371 ARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIK 430
Query: 691 CYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
Y++L+ K+C+ + A L K G
Sbjct: 431 TYDLLMGKMCANNQLTRANGLYKEAAKKG 459
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 12/272 (4%)
Query: 235 RGYESHMTNVIVIKHLCKQGRLEEAEAHLNGLVGS-GKELHRSELSFLIGVLCESNRFER 293
+G T I L + GR ++ + G + + L+ ++ LCE
Sbjct: 170 KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI 229
Query: 294 AVELVSEFGTSL-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIG 352
A ++V + P EN + I G +LDEA + GF YN+++
Sbjct: 230 AEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRG-GFEIGTKAYNMMLD 288
Query: 353 RLLRENRLKDVYEL-------LMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSR 405
+ + R KD ++L L++M +P N T N ++ CK+ + A+ LF
Sbjct: 289 CVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRM 348
Query: 406 SQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLR--SSSGTGYFPDRRTFSTLANALCREC 463
++G P+ Y LI +L E ++ S+G G +++ + LC
Sbjct: 349 GEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIE 408
Query: 464 KIDEMWDLLDFALERRFMPNSSTYSRFVSALC 495
+++ + P TY + +C
Sbjct: 409 RLEHAMSVFKSMKANGCKPGIKTYDLLMGKMC 440
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 20/290 (6%)
Query: 275 RSELSF--LIGVLCESNRFERAVEL-----VSEFGTSLPLENAYGVWIRGLVQGGRLDEA 327
R E SF L+ LCE A EL V G S+ + + +RG + G +
Sbjct: 149 RDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKC 208
Query: 328 LEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLC 387
E+++ K D+EG Y+I + + + + +L +M + ++V N V+
Sbjct: 209 KEYWK-KMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIR 267
Query: 388 FFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFP 447
V+ + +F + G PN + +I LC DG ++AYR+L G P
Sbjct: 268 AIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQP 327
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG-YLM 506
D T+ L R K E+ L + P TY + R G ++ Y+
Sbjct: 328 DSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVW 384
Query: 507 R-----GDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKR 551
+ GD A Y +I I+ D+A EM E+G +R
Sbjct: 385 KTMKESGDTPDSAA---YNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 184 AGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICMRGYESHM-T 242
+GKP A+ L M+ + + LD Y+ ++ ++ + + ++ RG E ++ T
Sbjct: 237 SGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVAT 296
Query: 243 NVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFG 302
+ +IK LC+ GR+ +A L+ + G + I +C +R E+ E++S FG
Sbjct: 297 HNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS------ITYMCLFSRLEKPSEILSLFG 350
Query: 303 TSL-----PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRE 357
+ P + Y + +R + G L L ++ ++S G P YN +I L+++
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES-GDTPDSAAYNAVIDALIQK 409
Query: 358 NRLKDVYELLMDMNETCIPP 377
L E +M E + P
Sbjct: 410 GMLDMAREYEEEMIERGLSP 429
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 143/374 (38%), Gaps = 19/374 (5%)
Query: 326 EALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM-NETCIPPNMVTMNA 384
+ALEFF GF +N +I L + + + L+ M T PN VT
Sbjct: 63 KALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRI 122
Query: 385 VLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL--RSSSG 442
V + +V A++ ++ F L Y L+ LC EA + ++ G
Sbjct: 123 VFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIG 181
Query: 443 TGYFPDRRTFSTLA----NALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAG 498
G+ L + L K E W +D + +YS ++ +C++G
Sbjct: 182 NGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD---TEGVTKDLFSYSIYMDIMCKSG 238
Query: 499 RVEDGYLMRGDLDKVTARF---SYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYR 555
+ + ++ + +Y +I S + R+ EM+E+G E +++
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 556 HVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCDIFNSFIDGAMHANKPDLAREVFELMQRN 614
++ L R + L EM G +P + KP +F M R+
Sbjct: 299 TIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS---RLEKPSEILSLFGRMIRS 355
Query: 615 GIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQV-VVSTKLYNRMIVGLCKSDKADIA 673
G+ + +++M+ + R + L + ++ + YN +I L + D+A
Sbjct: 356 GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMA 415
Query: 674 LELCFEMLKVGLNP 687
E EM++ GL+P
Sbjct: 416 REYEEEMIERGLSP 429
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 148/386 (38%), Gaps = 57/386 (14%)
Query: 489 RFVSALCRAGRVEDGYLMRGDLDKVTARF----------SYAKMIMGFIKSNRGDIAARL 538
FV ++ R + Y GD+DK + F S+ +I G+ ++ + A ++
Sbjct: 189 EFVDSVARNAMIA-AYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 539 LVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHGKPHCDIFNS-FIDGAMH 597
V M+E G + S+ VL+ L + + + ++ +G +S +D
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCK 307
Query: 598 ANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLY 657
A E L+ G + +ASS I+ Y ++ +A R F+ + + +V ++
Sbjct: 308 CGNMKYA-ESAHLLYGFGNLYSASSMIV---GYSSQGKMVEAKRLFDSLSEKNLV---VW 360
Query: 658 NRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEK 717
M +G + D LEL + N V V CSL+ Y E
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEP--------- 411
Query: 718 AGRRLTSFLGNVLLFHSMISPEVYHSCVDLRREKEGEFLDSSMLTLIIGAFSGCLRVSYS 777
G + HS+ + G +D ++T + +S C V Y+
Sbjct: 412 ---------GKEIHGHSL---------------RTGILMDKKLVTAFVDMYSKCGNVEYA 447
Query: 778 IQELEELIAKCFPVDIYTYNLLMRKLTHHDMD-KACELFDRMCQRGLEPNRWTYGLMAHG 836
E + F D YN ++ HH + K+ + F+ M + G +P+ T+ +
Sbjct: 448 ----ERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSA 503
Query: 837 FSNHGRKDEAKRWVHEMLKKGFNPPE 862
+ G E +++ M++ PE
Sbjct: 504 CRHRGLVLEGEKYFKSMIEAYNISPE 529
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
E F + R +EGF V+ + L ++ R + EL + + P++V A++
Sbjct: 186 EIFHKMR-TEGFTNEAVK---MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDG-CPKEAYRVLRSSSGTGYFP 447
+ G L++F G+SPN Y LI L DG K+A + L G G P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 448 DRRTFSTLANALCRECKIDEMWDLLDFALERRFMPN 483
+ T++ + A RE K + +LL + F+P+
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%)
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
+G P + ++I E++ +V ++L M + + + T N + CK
Sbjct: 216 KGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKE 275
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
A L + G+ PN + Y +LI C + +EA ++ + G PD + TL
Sbjct: 276 AKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIY 335
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGYLMRGDLDKVTAR 516
LC+ + L ++E+ ++P+ S V+ L + +VE+ + G + + R
Sbjct: 336 YLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTR 394
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 3/210 (1%)
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVA 398
G P YN +I Y ++ +M I PN + ++ F D
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 399 LELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
++ G++ Y I +LC KEA +L G P+ T+S L +
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDGY-LMRGDLDKV-TAR 516
C E +E L + R P+S Y + LC+ G E L + ++K
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 517 FSYAK-MIMGFIKSNRGDIAARLLVEMKEK 545
FS K ++ G K ++ + A L+ ++KEK
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 125/292 (42%), Gaps = 30/292 (10%)
Query: 431 KEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRF 490
K A +L+S PDR A +L +C+ID + F+ + +S
Sbjct: 48 KAALSLLKSEKD----PDRILEICRAASLTPDCRIDRIA----FSAAVENLAEKKHFSAV 99
Query: 491 VSALCRAGRVEDGYLM-RGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYEL 549
+ L DG++ R DL + RF+ A I+ + ++N D + R+ ++++ +E+
Sbjct: 100 SNLL-------DGFIENRPDLK--SERFA-AHAIVLYAQANMLDHSLRVFRDLEK--FEI 147
Query: 550 KRS--SYRHVL-HCLLHMD-NPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAR 605
R+ S +L CL+ D R + + M +P + +N I + +
Sbjct: 148 SRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSY 207
Query: 606 EVFELMQRNGIMTNASSQILVMKSYF---RSRRISDALRFFNDIRHQVVVSTKLYNRMIV 662
+ M+R GI N+SS L++ ++ +S + L D + VST YN I
Sbjct: 208 SIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVST--YNIRIQ 265
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNV 714
LCK K+ A L ML G+ P+ Y L+ C+ + EA L +
Sbjct: 266 SLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+D E+ M E + PN V M L CK G+V A++LF G P + Y +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRF 480
+ C ++A R+ R G P+ ++ L L +D+ LE
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 481 MPNSSTYSRFVSALCRAGRVE 501
PN T+ V ALCR VE
Sbjct: 233 SPNVPTFVELVDALCRVKGVE 253
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIV 662
A ++F LM+ G + V++++ ++ +I DA R F +++ + Y ++
Sbjct: 150 AMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQ 209
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
GL + D A+ C EML+ G +P++ + LV LC +K +A + ++ + G
Sbjct: 210 GLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 361 KDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYL 420
+D E+ M E + PN V M L CK G+V A++LF G P + Y +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAM---LDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRF 480
+ C ++A R+ R G P+ ++ L L +D+ LE
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 481 MPNSSTYSRFVSALCRAGRVE 501
PN T+ V ALCR VE
Sbjct: 233 SPNVPTFVELVDALCRVKGVE 253
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Query: 604 AREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKL-YNRMIV 662
A ++F LM+ G + V++++ ++ +I DA R F +++ + Y ++
Sbjct: 150 AMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQ 209
Query: 663 GLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAG 719
GL + D A+ C EML+ G +P++ + LV LC +K +A + ++ + G
Sbjct: 210 GLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 1/193 (0%)
Query: 311 YGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDM 370
Y V +R LV+GGR E + Q + + P V Y I++ ++ + +L ++
Sbjct: 254 YTVVMRFLVEGGRGKEVVSVLNQMK-CDRVEPDLVCYTIVLQGVIADEDYPKADKLFDEL 312
Query: 371 NETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCP 430
+ P++ T N + CK ++ AL++ +S ++ G PN + Y LI L G
Sbjct: 313 LLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDL 372
Query: 431 KEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRF 490
A + + G + TF + +A ++ LL+ A SS
Sbjct: 373 SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEV 432
Query: 491 VSALCRAGRVEDG 503
+S LC G ++
Sbjct: 433 ISRLCEKGLMDQA 445
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 161/385 (41%), Gaps = 19/385 (4%)
Query: 342 PCKVRYNILIGRLLRENRLKDVYELL--MDMNETCIPPNMVTMNAVLCFFCKLGMVDVAL 399
P Y +I L + ++L+++ +L ++++E P + + + + G ++ A+
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFS-GRIEEAI 128
Query: 400 ELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKE-AYRVLRSSSGTGYFPDRRTFSTLANA 458
E+F F P+ L+L L E +L + G + TF L +A
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 459 LCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVE----DGYLMRGDLDKVT 514
LCR ++D +L+ + + + + YSR +S++C+ GYL DL K
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL--EDLRK-- 244
Query: 515 ARFS-----YAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLL-HMDNPR 568
RFS Y ++ ++ RG +L +MK E Y VL ++ D P+
Sbjct: 245 TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 304
Query: 569 TRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMK 628
++ P +N +I+G N + A ++ M + G N + +++K
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 629 SYFRSRRISDALRFFNDIR-HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNP 687
+ ++ +S A + ++ + V ++ ++ MI + D+ A L E + +
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFV 424
Query: 688 SIECYEVLVQKLCSLKRYYEAVNLV 712
E ++ +LC +AV L+
Sbjct: 425 KSSRIEEVISRLCEKGLMDQAVELL 449
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 15/265 (5%)
Query: 250 LCKQGRLEEAEAHLNGLVGSGKELHRS-----ELSFLIGVLCESNRFERAVELVSEFGTS 304
LCK + E L V KE+ R E + L+ C + A + + +
Sbjct: 146 LCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR 205
Query: 305 L-PLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDV 363
P + + G + G + A E F + GF P V Y I I ++ +
Sbjct: 206 FNPDVKTMNILLLGFKEAGDVT-ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEA 264
Query: 364 YELLMDMNETCIPPNMVTMNAVLCFFCKLGMVD---VALELFNSRSQFGLSPNYMAYKYL 420
L DM+ +T+ + G+ A +LF+ S+ GL+P+ AY L
Sbjct: 265 LRLFEDMDRLDFD---ITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNAL 321
Query: 421 ILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANAL--CRECKIDEMWDLLDFALER 478
+ +L G A +V++ G PD TF ++ + +E + + + ER
Sbjct: 322 MSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKER 381
Query: 479 RFMPNSSTYSRFVSALCRAGRVEDG 503
+P + T + C G V G
Sbjct: 382 SLVPKTPTIVMLMKLFCHNGEVNLG 406
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 625 LVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADI-ALELCF-EMLK 682
++++++ R + +A F + + K N +++G + D+ A EL + EM+K
Sbjct: 181 ILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGF--KEAGDVTATELFYHEMVK 238
Query: 683 VGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRRLTSFLGNVLLFHSMISPEVYH 742
G P+ Y + + C + + EA+ L ++ +T + L+ S ++
Sbjct: 239 RGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA----R 294
Query: 743 SCVDLRR-----EKEGEFLDSSMLTLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN 797
+ + R+ K G D ++ + C VS +I+ ++E+ K D T++
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 798 LL---MRKLTHHDMDKACELFDRMCQRGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEML 854
+ M K + CE + +M +R L P T ++ F ++G + ML
Sbjct: 355 SMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYML 414
Query: 855 KKGFNP 860
+KG+ P
Sbjct: 415 EKGYCP 420
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 370 MNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGC 429
M E+ + + N ++ CK G D A +F + GL P+ Y +I
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRA 64
Query: 430 PKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSR 489
K ++R G PD T++++ + LC++ K+ A R+ + ST++
Sbjct: 65 EKLYAEMIRR----GLVPDTITYNSMIHGLCKQNKL---------AQARKVSKSCSTFNT 111
Query: 490 FVSALCRAGRVEDGYLMRGDLDK---VTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKG 546
++ C+A RV+DG + ++ + V +Y +I GF + + A + EM G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 547 YELKRSSYRHVL 558
++R +L
Sbjct: 172 VYSSSITFRDIL 183
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 96/480 (20%), Positives = 186/480 (38%), Gaps = 33/480 (6%)
Query: 157 DFLRDFRSCSFPHRARYHDTLVVGYAI-------AGKPDIALHLLGRMRFQGLDLDGFGY 209
D+ R + H + V Y + A + DIA L MR + L D + Y
Sbjct: 134 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 193
Query: 210 HILLNSLAENNCYNAFDVIANQICMRGYESHMTNVIVIKHLCKQGR----LEEAEAHLNG 265
L+ S + FD + + + ++++ +L + R +A + +
Sbjct: 194 STLITSFGKEGM---FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSR 250
Query: 266 LVGSGKELHRSELSFLIGVLCESNRFERAVELVSEFGTS--LPLENAYGVWIRGLVQGGR 323
L SG + +I V ++ F A L+ E + LP +Y + V+ +
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 310
Query: 324 LDEALEFFRQKRDSEGFVPCKVRY---NILIGRLLRENRLKDVYELLMDMNETCIPPNMV 380
EAL F + ++ V C + NI+I + + +K+ L + + I PN+V
Sbjct: 311 FLEALSVFAEMKE----VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVV 366
Query: 381 TMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS 440
+ N +L + + + A+ LF + + N + Y +I ++A +++
Sbjct: 367 SYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM 426
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRV 500
G P+ T+ST+ + + K+D L + Y + A R G +
Sbjct: 427 QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLM 486
Query: 501 EDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+ +L K+ I K+ R + A + + E G E+K S V C
Sbjct: 487 GHAKRLLHEL-KLPDNIPRETAITILAKAGRTEEATWVFRQAFESG-EVKDIS---VFGC 541
Query: 561 LLHMDNPRTRFFNLLE----MMTHGK-PHCDIFNSFIDGAMHANKPDLAREVFELMQRNG 615
++++ + R+ N++E M T G P ++ ++ + + A V+ MQ G
Sbjct: 542 MINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG 601
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 322 GRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVT 381
G ++EA FR RD + + YN +I L + DM PN VT
Sbjct: 304 GDINEARRVFRVMRDKD-----VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVT 358
Query: 382 MNAVLCFFCKLGMVDVALELFNS-RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSS 440
+ A+L G++D+ LE+FNS + F + P Y ++ L G +EAYR + +
Sbjct: 359 LVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIEN- 417
Query: 441 SGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFM---PNSSTYSRFVSALCRA 497
PD TL +A CKI +L + +R F P+S TY + +
Sbjct: 418 --IPIEPDHIMLGTLLSA----CKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 498 GRVEDGYLMR 507
G+ ++ +R
Sbjct: 472 GKWKESTEIR 481
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 97/235 (41%), Gaps = 6/235 (2%)
Query: 274 HRSELSF--LIGVLCESNRFERAVELVSEFGTSLPLE---NAYGVWIRGLVQGGRLDEAL 328
R+ LSF L+ S +F+ + E L +E +Y I+GL G EA+
Sbjct: 138 KRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAV 197
Query: 329 EFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
+ +++G P + +NIL+ + + ++ ++ M E + ++ + NA L
Sbjct: 198 ALIDE-IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLG 256
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPD 448
+ + LF+ L P+ + +I +G EA + G P
Sbjct: 257 LAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPL 316
Query: 449 RRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVEDG 503
+ F++L A+C+ ++ ++L +R + + + V AL + + ++
Sbjct: 317 KFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
>AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26596207-26598192 FORWARD
LENGTH=661
Length = 661
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 23/201 (11%)
Query: 281 LIGVLCESNRFERAVELVSEF---GTSLPLE------NAYGVWIRGLVQGGRLDEALEFF 331
++ +L + + E +L+S+ G LP + YG+ + + A++ F
Sbjct: 417 MMAMLARNGQVELVDKLISKVRIEGIKLPFSTIRLIIDLYGI-------SKKPEAAIKVF 469
Query: 332 RQKRDSEGFVP---CKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCF 388
+ R G + + Y+ L+ L + R + E L DM T + P++ T + ++
Sbjct: 470 NEDRTLCGSISDFNLMLLYSSLLRTLTKCKRNAEALETLEDMMLTGVSPDIQTFSGLMYH 529
Query: 389 FCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKE--AYRVLRSSSGTGYF 446
F G + LF+ Q GL P+ K L+ C C + AYRV + +
Sbjct: 530 FALQGEIQTVERLFSMVRQIGLEPDPYMLKLLVQAYC--RCERSVLAYRVFQDMKDSNLM 587
Query: 447 PDRRTFSTLANALCRECKIDE 467
PDR T L +L RE K E
Sbjct: 588 PDRETKELLVKSLWREEKRKE 608
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 4/231 (1%)
Query: 281 LIGVLCESNRFERAVELVSEFGTSLPLEN--AYGVWIRGLVQGGRLDEALEFFRQKRDSE 338
LI +L + + E+A EL E + N Y + + GR D A + + S
Sbjct: 156 LIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSH 215
Query: 339 GFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGM-VDV 397
P Y+ILI L+ V +LL DM I PN +T N ++ + K M V++
Sbjct: 216 NCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEM 275
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLAN 457
L + P+ + +G + +G P+ RTF+ L +
Sbjct: 276 ESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLD 335
Query: 458 ALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRAGRVED-GYLMR 507
+ + +M ++++ + + TY+ + A RAG ++ YL R
Sbjct: 336 SYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFR 386
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 165/461 (35%), Gaps = 74/461 (16%)
Query: 281 LIGVLCESNRFERAVELVSEF---GTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDS 337
+I + + R+ ++ L F +P +Y I G +DEALE +R +
Sbjct: 186 IIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILAN 245
Query: 338 EGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDV 397
F P V Y L L++ R+ D LL +M + N ++ + LG D
Sbjct: 246 APFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDK 305
Query: 398 ALELFNSRSQFGLSPNYMAYKYLILTL---CW--DGCPKEAYRVLRSSSGTGYFPDRRTF 452
A+E F+ L Y ++ W G KEA RS + T
Sbjct: 306 AVEFFDE-----LKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTG 360
Query: 453 STLANALCRECKIDEMWDLLDFALERRFMP-----NSSTYSRFVSALCRAGRVEDGY-LM 506
+ L + K DE W L + L+ P NS T V+ + G +
Sbjct: 361 NVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTF 420
Query: 507 RGDLDKVTAR------FSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHVLHC 560
+ KVT++ Y ++ F + A R E + S+R ++
Sbjct: 421 KKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDA 480
Query: 561 LLHMDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELMQRNGIMTNA 620
L + R + ++M+ + +D + D VF + +NG +T +
Sbjct: 481 YLKAE----RIDDAVKML----------DRMVDVNLRVVA-DFGARVFGELIKNGKLTES 525
Query: 621 SSQILVMKSYFRSRRISDALRFFNDIRHQVVVSTKLYNRMIVGLCKSDKADIALELCFEM 680
+ + M + +Y+ ++ GLC D D A ++ EM
Sbjct: 526 AEVLTKMG------------------EREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEM 567
Query: 681 LKVGLNPSIECYEVLVQKLCSLKRYYEAVNLVNVYEKAGRR 721
++ + + ++ R + ++ V+EKAGRR
Sbjct: 568 IRHNVG------------VTTVLREF----IIEVFEKAGRR 592
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 18/255 (7%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
++++ G+A GKP+ AL L M +G+ DGF LL++ A+ + +
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 235 RGYES--HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF- 291
G H +NV+ + + GR+EEA+ + +V S S ++G+ N F
Sbjct: 251 VGLTRNLHSSNVL-LDLYARCGRVEEAKTLFDEMVDKNS---VSWTSLIVGLAV--NGFG 304
Query: 292 ERAVELVSEFGTS---LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
+ A+EL ++ LP E + + G + E E+FR+ R+ P +
Sbjct: 305 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 364
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
++ L R ++K YE + M + PN+V +L G D+A F
Sbjct: 365 CMVDLLARAGQVKKAYEYIKSMP---MQPNVVIWRTLLGACTVHGDSDLA--EFARIQIL 419
Query: 409 GLSPNYMAYKYLILT 423
L PN+ Y++L+
Sbjct: 420 QLEPNHSG-DYVLLS 433
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 138/329 (41%), Gaps = 18/329 (5%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
+T+V+GYA G AL R G+ + F + LL + ++ Q+ +
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 235 RGYESHMTNVI----VIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNR 290
G+ ++NV+ +I K G++E A+ + + + K++H + LI +
Sbjct: 208 AGF---LSNVVLSCSIIDAYAKCGQMESAKRCFDEM--TVKDIHI--WTTLISGYAKLGD 260
Query: 291 FERAVELVSEFGTSLPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNIL 350
E A +L E P+ ++ I G V+ G + AL+ FR K + G P + ++
Sbjct: 261 MEAAEKLFCEMPEKNPV--SWTALIAGYVRQGSGNRALDLFR-KMIALGVKPEQFTFSSC 317
Query: 351 IGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQFGL 410
+ L+ E+ M T + PN + +++++ + K G ++ + +F
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD--- 374
Query: 411 SPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWD 470
+ + + +I L G +A R+L P+R T + NA ++E
Sbjct: 375 KHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLR 434
Query: 471 LLD-FALERRFMPNSSTYSRFVSALCRAG 498
+ ++ +P+ Y+ + L RAG
Sbjct: 435 WFESMTVQHGIVPDQEHYACLIDLLGRAG 463
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 18/255 (7%)
Query: 175 DTLVVGYAIAGKPDIALHLLGRMRFQGLDLDGFGYHILLNSLAENNCYNAFDVIANQICM 234
++++ G+A GKP+ AL L M +G+ DGF LL++ A+ + +
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 117
Query: 235 RGYES--HMTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRF- 291
G H +NV+ + + GR+EEA+ + +V S S ++G+ N F
Sbjct: 118 VGLTRNLHSSNVL-LDLYARCGRVEEAKTLFDEMVDKNS---VSWTSLIVGLAV--NGFG 171
Query: 292 ERAVELVSEFGTS---LPLENAYGVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYN 348
+ A+EL ++ LP E + + G + E E+FR+ R+ P +
Sbjct: 172 KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFG 231
Query: 349 ILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQF 408
++ L R ++K YE + M + PN+V +L G D+A F
Sbjct: 232 CMVDLLARAGQVKKAYEYIKSMP---MQPNVVIWRTLLGACTVHGDSDLA--EFARIQIL 286
Query: 409 GLSPNYMAYKYLILT 423
L PN+ Y++L+
Sbjct: 287 QLEPNHSG-DYVLLS 300
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 8/193 (4%)
Query: 315 IRGLVQGGRLDEALEFFRQKRDSEGFVPCKVRYNILIGRLLRENRLKDVYELLMDMNETC 374
I L G + AL +D V ++L G ++ N +K+ ++ DM
Sbjct: 180 ISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRN-VKEARRVIQDMKSAG 238
Query: 375 IPPNMVTMNAVLCFFCKL-------GMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWD 427
I P++ N++L C+ G+V AL + + + P M+Y L+ L
Sbjct: 239 ITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRT 298
Query: 428 GCPKEAYRVLRSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTY 487
+E+ ++L +G PD ++ + L + + ++D +ER F P Y
Sbjct: 299 RRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFY 358
Query: 488 SRFVSALCRAGRV 500
+ LC RV
Sbjct: 359 YDLIGVLCGVERV 371
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 126/284 (44%), Gaps = 31/284 (10%)
Query: 588 FNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDIR 647
+N+ I G + K D AR++F+ + T + ++ Y ++R + +A F+ +
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA----MVSGYIQNRMVEEARELFDKMP 308
Query: 648 HQVVVSTKLYNRMIVGLCKSDKADIALELCFEMLKVGLNPSIECYEVLVQKLCSLKRYYE 707
+ VS +N M+ G + ++ ++A EL F+++ ++ + ++ + E
Sbjct: 309 ERNEVS---WNAMLAGYVQGERMEMAKEL-FDVMPC---RNVSTWNTMITGYAQCGKISE 361
Query: 708 AVNLVNVYEKAGRRLTSFLGNVLLFHSMIS--PEVYHSCVDLR----REKEGEFLDSSML 761
A NL ++K +R + + + +MI+ + HS LR E+EG L+ S
Sbjct: 362 AKNL---FDKMPKR------DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 762 TLIIGAFSGCLRVSYSIQELEELIAKCFPVDIYTYN-LLMRKLTHHDMDKACELFDRMCQ 820
+ + + + + Q L+ + + N LL+ +++A +LF M
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 821 RGLEPNRWTYGLMAHGFSNHGRKDEAKRWVHEMLKKGFNPPENT 864
+ + ++ M G+S HG + A R+ M ++G P + T
Sbjct: 473 KDIV----SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 5/215 (2%)
Query: 471 LLDFALERRFMPNSSTYSRFVSALCRAG---RVEDGYLMRGDLDKVTARFSYAKMIMGFI 527
L D LER P+++T++ +S + G R + + + A MI +
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYG 256
Query: 528 KSNRGDIAARLLVEMKEKGYELKRSSYRHVLHCLLHMDNPRTRFFNLLEMMTHG-KPHCD 586
++ D+A L + + + + ++ ++ N EM G KP+
Sbjct: 257 RAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLV 316
Query: 587 IFNSFIDGAMHANKPDLAREVFELMQRNGIMTNASSQILVMKSYFRSRRISDALRFFNDI 646
I+N ID A +P A+ +++ + NG N S+ ++++Y R+R DAL + ++
Sbjct: 317 IYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREM 376
Query: 647 RHQVVVSTKLYNRMIVGLCKSDK-ADIALELCFEM 680
+ + + T + ++ +C ++ D A E+ +M
Sbjct: 377 KEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 91/236 (38%), Gaps = 7/236 (2%)
Query: 378 NMVTMNAVLCFFCKLGMVDVALELFNSRSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVL 437
N+ MN++L +C+ G + A F+ L + + LI L EA +
Sbjct: 247 NLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL----ITWNTLISELERSD-SSEALLMF 301
Query: 438 RSSSGTGYFPDRRTFSTLANALCRECKIDEMWDLLDFALERRFMPNSSTYSRFVSALCRA 497
+ G+ P+ TF++L A ++ L R F N + + +
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 498 GRVEDGYLMRGDLDKVTARFSYAKMIMGFIKSNRGDIAARLLVEMKEKGYELKRSSYRHV 557
G + D + G++ S+ M++G+ G A L +M G R + V
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 558 LHCLLH--MDNPRTRFFNLLEMMTHGKPHCDIFNSFIDGAMHANKPDLAREVFELM 611
L H + ++FN++E P DI+N +D A K A E+ E M
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%)
Query: 345 VRYNILIGRLLRENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNS 404
+ +N L+ + L M +PPN++T N ++ + G VD A ++F
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 405 RSQFGLSPNYMAYKYLILTLCWDGCPKEAYRVLRSSSGTGYFPDRRTFSTLANA 458
G+ PN +++ ++ + +GC +EA LR +G P+ + + +A
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 12/204 (5%)
Query: 241 MTNVIVIKHLCKQGRLEEAEAHLNGLVGSGKELHRSELSFLIGVLCESNRFERAVELVSE 300
+T I+I ++G L+EA+ ++ +V SG + + + ++ ES + + S
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI 340
Query: 301 FGTSLPLENAY--GVWIRGLVQGGRLDEALEFFRQKRDSEGFVPCK--VRYNILIGRLLR 356
S NAY + + G L +A + F +P K V +N ++ L
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND-------IPKKDLVSWNTMLHGLGV 393
Query: 357 ENRLKDVYELLMDMNETCIPPNMVTMNAVLCFFCKLGMVDVALELFNSRSQ-FGLSPNYM 415
K+ EL M I P+ VT AVLC G++D ++ F S + + L P
Sbjct: 394 HGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVE 453
Query: 416 AYKYLILTLCWDGCPKEAYRVLRS 439
Y L+ L G KEA +V+++
Sbjct: 454 HYGCLVDLLGRVGRLKEAIKVVQT 477