Miyakogusa Predicted Gene

Lj4g3v2370470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JJ56_MEDTR 972 79.3 89.2 (tr|G7JJ56) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_4g119120 PE=4 SV=1
TAIR_pep AT4G22760.1 647 53.1 72.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:11960553-11962289 FORWARD LENGTH=578
Medicago Medtr4g119120.1 972 79.3 89.2 | PPR containing plant-like protein | HC | chr4:49335688-49337418 | 20130731
Soybean Glyma17g02690.1 940 82.1 89.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2370470.1 length: 579 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.013 70-100
171-199
202-231
234-262
267-293
370-396
469-493
HMMPfam PF13041 PPR_2 1.3e-09 293-342
396-442
HMMPfam PF13812 PPR_3 0.0065 142-170
HMMTigr TIGR00756 PPR: 0.00084 70-103
141-170
171-196
202-232
234-262
268-293
296-322
370-398
398-431
433-465
ProfileScan PS51375 PPR 6.533 68-102
200-234
169-199
138-168
293-327
262-292
235-261
396-430
365-395
330-364
431-465
466-496
532-566
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.2e-10 77-278
495-554
no_ID  
HMMPanther PTHR24015 FAMILY 1.9e-176 24-573
superfamily SSF48452 TPR-like 0.00012 180-330
382-554
Wolf-PSORT
Lj4g3v2370470.1	nucl 6, cyto 6, cyto_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v2370470.1