Miyakogusa Predicted Gene
- Lj4g3v2249010.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7LZ82_SOYBN |
1234 |
78.6 |
88.0 |
(tr|K7LZ82) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT1G64260.1 |
154 |
23.2 |
43.6 |
| Symbols: | MuDR family transposase | chr1:23847756-23849915 FORWARD LENGTH=719 |
Medicago |
Medtr2g018850.1 |
96.7 |
30.9 |
52.9 |
| hypothetical protein | LC | chr2:6002946-6005884 | 20130731 |
Soybean |
Glyma20g22440.2 |
651 |
54.4 |
68.4 |
|
LJGI |
gnl|LJGI|TC62729 |
1318 |
99.7 |
99.7 |
similar to UniRef100_Q9FI74 Cluster: Mutator-like transposase-like protein; n=1; Arabidopsis thaliana|Rep: Mutator-like transposase-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v2249010.1 |
length: 756 aa. |
IPR000270 |
Phox/Bem1p |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0005515 |
protein binding |
|
|
HMMPfam |
PF00564 |
PB1 |
2.5e-09 |
21-99 |
HMMSmart |
SM00666 |
PB1 |
8.7e-15 |
19-102 |
IPR004332 |
Transposase, MuDR, plant |
HMMPfam |
PF03108 |
DBD_Tnp_Mut |
2.6e-22 |
185-247 |
IPR006564 |
Zinc finger, PMZ-type |
Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
HMMSmart |
SM00575 |
plant |
2.2e-10 |
634-661 |
IPR007527 |
Zinc finger, SWIM-type |
Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
HMMPfam |
PF04434 |
SWIM |
2.7e-09 |
629-658 |
ProfileScan |
PS50966 |
ZF_SWIM |
10.126 |
627-659 |
IPR018289 |
MULE transposase domain |
HMMPfam |
PF10551 |
MULE |
6.7e-19 |
389-472 |
no_ID |
|
HMMPanther |
PTHR31973 |
FAMILY |
1.7e-70 |
186-746 |
HMMPanther |
PTHR31973:SF0 |
SUBFAMILY |
1.7e-70 |
186-746 |
Seg |
seg |
seg |
NA |
700-721 |
superfamily |
SSF54277 |
CAD |
5.2e-07 |
20-110 |
- Wolf-PSORT
Lj4g3v2249010.1 cyto 6, nucl 4, chlo 1, mito 1, plas 1, cysk 1, chlo_mito 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj4g3v2249010.1 |
|