Miyakogusa Predicted Gene
- Lj4g3v2249010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj4g3v2249010.1 Non Chatacterized Hit- tr|F6HE43|F6HE43_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,74.4,0,seg,NULL; PB1 domain,Phox/Bem1p; plant mutator transposase
zinc finger,Zinc finger, PMZ-type; SUBFAM,CUFF.50583.1
(2274 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62729 similar to UniRef100_Q9FI74 Cluster: Mutator-li... 1318 0.0
gnl|LJGI|TC71106 weakly similar to UniRef100_Q9FI74 Cluster: Mut... 846 0.0
gnl|LJGI|AV766619 weakly similar to UniRef100_Q9FI74 Cluster: Mu... 731 0.0
gnl|LJGI|TC82228 weakly similar to UniRef100_Q8VWI0 Cluster: AT3... 62 2e-08
>gnl|LJGI|TC62729 similar to UniRef100_Q9FI74 Cluster: Mutator-like transposase-like
protein; n=1; Arabidopsis thaliana|Rep: Mutator-like
transposase-like protein - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 747
Score = 1318 bits (665), Expect = 0.0
Identities = 671/673 (99%)
Strand = Plus / Plus
Query: 1 atggcttcaaggaaagtcatagctatatgtcaatcaggaggtgagtttgtgacgaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atggcttcaaggaaagtcatagctatatgtcaatcaggaggtgagtttgtgacgaaacca 134
Query: 61 gatggatcgttgtcatacaatggaggggatgcttatgcgattgacattgataaggaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gatggatcgttgtcatacaatggaggggatgcttatgcgattgacattgataaggaaaca 194
Query: 121 aagctgagtgatttgaagtcagaaattgcagaaaatttcagctgcaatgtagacacgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aagctgagtgatttgaagtcagaaattgcagaaaatttcagctgcaatgtagacacgttg 254
Query: 181 attatcaagtacttccttccgggcaacaagaaaacactcatcacagtatctaaagacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attatcaagtacttccttccgggcaacaagaaaacactcatcacagtatctaaagacaag 314
Query: 241 gatttgcaacgcatggtcagtttcgttggcgatgctcacacagttgatgtgtttgtttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gatttgcaacgcatggtcagtttcgttggcgatgctcacacagttgatgtgtttgtttca 374
Query: 301 gaggaaggagcagctcgaaacacacccaatgcgcctgttgctgttagtaggtcaagcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaggaaggagcagctcgaaacacacccaatgcgcctgttgctgttagtaggtcaagcagg 434
Query: 361 ccaaccgtgtcagaatcccttgatgttcctattgttgcccctattgatgtcatccttgat 420
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acaaccgtgtcagaagcccttgatgttcctattgttgcccctattgatgtcatccttgat 494
Query: 421 cccgcccaagcccaatcccctgatcaagttgagggggaggtagctaatgcagcccctgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cccgcccaagcccaatcccctgatcaagttgagggggaggtagctaatgcagcccctgca 554
Query: 481 ccttctgtttgttctggggccaatgatgacaagcatcgtaaagctgcacaacagtgggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ccttctgtttgttctggggccaatgatgacaagcatcgtaaagctgcacaacagtgggaa 614
Query: 541 aataccatcactggtgtgggccaaaggtttaacagttttagtgaactgcgagaagcattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aataccatcactggtgtgggccaaaggtttaacagttttagtgaactgcgagaagcattg 674
Query: 601 cacaaatactctattgcccatgggtttgcttacagatacaaaaagaatgacagtcaccgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cacaaatactctattgcccatgggtttgcttacagatacaaaaagaatgacagtcaccgt 734
Query: 661 atctccgtcaaat 673
|||||||||||||
Sbjct: 735 atctccgtcaaat 747
>gnl|LJGI|TC71106 weakly similar to UniRef100_Q9FI74 Cluster: Mutator-like
transposase-like protein; n=1; Arabidopsis thaliana|Rep:
Mutator-like transposase-like protein - Arabidopsis
thaliana (Mouse-ear cress), partial (14%)
Length = 743
Score = 846 bits (427), Expect = 0.0
Identities = 430/431 (99%)
Strand = Plus / Plus
Query: 1844 agggtaacacatttgaagtccgtggagaatctgttgattttgttgatattgatcattgga 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggtaacacatttgaagtccgtggagaatctgttgattttgttgatattgatcattgga 60
Query: 1904 gttgtagctgcaagggatggcaacttactggcctgccttgttgtcatgccattgctgtac 1963
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gttgtagctgcaagggatggcaacttactagcctgccttgttgtcatgccattgctgtac 120
Query: 1964 tggaatgtgttgggaggaacccatatgattattgctccagatacttcacagttgagaatt 2023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggaatgtgttgggaggaacccatatgattattgctccagatacttcacagttgagaatt 180
Query: 2024 accgattaacatatgcagaaacgattcaccctttgccggatcttgacagaccaaatgagg 2083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accgattaacatatgcagaaacgattcaccctttgccggatcttgacagaccaaatgagg 240
Query: 2084 gtgaattggctctaccagcagttactgtaacccctccaccaactaaacgccctcctggtc 2143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgaattggctctaccagcagttactgtaacccctccaccaactaaacgccctcctggtc 300
Query: 2144 ggccaaagatgaagccggttgagtcaatagacatgatcaaacgtcagcttcagtgcagta 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggccaaagatgaagccggttgagtcaatagacatgatcaaacgtcagcttcagtgcagta 360
Query: 2204 agtgcaaggagcttggtcacaataagaagacatgcaaaaattcactgcctcttgaacagg 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtgcaaggagcttggtcacaataagaagacatgcaaaaattcactgcctcttgaacagg 420
Query: 2264 atacttgagct 2274
|||||||||||
Sbjct: 421 atacttgagct 431
>gnl|LJGI|AV766619 weakly similar to UniRef100_Q9FI74 Cluster: Mutator-like
transposase-like protein; n=1; Arabidopsis thaliana|Rep:
Mutator-like transposase-like protein - Arabidopsis
thaliana (Mouse-ear cress), partial (14%)
Length = 383
Score = 731 bits (369), Expect = 0.0
Identities = 372/373 (99%)
Strand = Plus / Plus
Query: 1322 ttgctaattgtcagaatggtttaaaaaagtcactgtctgagatttttgaaaaatgccacc 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgctaattgtcagaatggtttaaaaaagtcactgtctgagatttttgaaaaatgccacc 60
Query: 1382 acagctattgtttacgctacctagctgagaagctgaacaaggacttgaaaggacaattct 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagctattgtttacgctacctagctgagaagctgaacaaggacttgaaaggacaattct 120
Query: 1442 ctcatgaggctagacgtttcatgattaatgatttttatgctgctgcttatgcacccaagc 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcatgaggctagacgtttcatgattaatgatttttatgctgctgcttatgcacccaagc 180
Query: 1502 aggagacttttgaacgtagtgttgaaaatatgaaagggatctctcctgaagccttcaact 1561
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 aggagacttttgaacgtagtgttgaaaatatgaaagggatctcttctgaagccttcaact 240
Query: 1562 gggtcatgcaaaatgagccagagcactgggccaatgcattctttaatggagcaaggtata 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtcatgcaaaatgagccagagcactgggccaatgcattctttaatggagcaaggtata 300
Query: 1622 atcatctgacatcaaattttggacaacaattctacaattggatgtccgaggcacacgagt 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atcatctgacatcaaattttggacaacaattctacaattggatgtccgaggcacacgagt 360
Query: 1682 tgccaattactca 1694
|||||||||||||
Sbjct: 361 tgccaattactca 373
>gnl|LJGI|TC82228 weakly similar to UniRef100_Q8VWI0 Cluster: AT3g06940/F17A9_9; n=2;
Arabidopsis thaliana|Rep: AT3g06940/F17A9_9 -
Arabidopsis thaliana (Mouse-ear cress), partial (16%)
Length = 602
Score = 61.9 bits (31), Expect = 2e-08
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 183 tatcaagtacttccttccgggcaacaagaaaacactcatcacagtatctaaagacaagga 242
||||||||| |||||||| || |||||||| || ||||| ||| | || || ||||||||
Sbjct: 273 tatcaagtatttccttcccgggaacaagaagactctcattacaatttccaatgacaagga 332
Query: 243 tttgcaacgcatggt 257
||||||||| |||||
Sbjct: 333 tttgcaacgaatggt 347