Miyakogusa Predicted Gene

Lj4g3v1880660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LZX2_SOYBN 984 77.1 84.3 (tr|I1LZX2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G25490.1 654 52.8 71.8 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 | chr2:10848018-10850275 REVERSE LENGTH=628
Medicago Medtr4g114640.1 840 70.5 79.0 | EIN3-binding F-box-like protein | HC | chr4:47161796-47165070 | 20130731
Soybean Glyma13g23510.1 984 77.1 84.3  
LJGI gnl|LJGI|TC73267 1740 100.0 100.0 similar to UniRef100_Q2PQJ1 Cluster: EIN3-binding F-box protein 1; n=1; Solanum lycopersicum|Rep: EIN3-binding F-box protein 1 - Solanum lycopersicum (Tomato) (Lycopersicon esculentum), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1880660.1 length: 683 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 0.0004 116-157
superfamily SSF81383 F-box 6.6e-08 103-150
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 7.2e+02 229-254
255-280
281-306
307-332
358-385
386-411
412-437
438-463
492-517
518-543
545-570
572-597
598-622
624-649
650-675
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.4e-27 202-474
475-676
HMMPanther PTHR23125 F-BOX/LEUCINE 1.6e-178 14-682
HMMPanther PTHR23125:SF68 SUBFAMILY 1.6e-178 14-682
HMMPfam PF12937 F-box-like 9.6e-07 114-145
HMMPfam PF13516 LRR_6 0.0093 229-253
281-304
Seg seg seg NA 2-16
165-174
327-337
619-634
superfamily SSF52047 RNI-like 5.4e-32 215-454
334-682
Wolf-PSORT
Lj4g3v1880660.1	plas 9.5, golg_plas 7, golg 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1880660.1