Miyakogusa Predicted Gene

Lj4g3v0975570.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K6K8_SOYBN 658 79.7 85.8 (tr|K7K6K8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G66470.1 577 78.8 92.2 | Symbols: | RNA binding;GTP binding | chr5:26541986-26544302 REVERSE LENGTH=427
Medicago Medtr8g077125.1 641 75.8 85.5 | GTP-binding protein Era protein | HC | chr8:32768242-32763709 | 20130731
Soybean Glyma02g06100.1 658 79.7 85.8  
LJGI gnl|LJGI|TC75892 809 100.0 100.0 similar to UniRef100_A7PUR8 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0975570.2 length: 453 aa.
IPR004044 K Homology domain, type 2
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF07650 KH_2 1.1e-13 358-435
ProfileScan PS50823 KH_TYPE_2 10.487 355-432
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 4.4e-20 158-316
IPR005662 GTP-binding protein Era
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
HAMAP MF_00367 GTPase_Era 31.200 153-446
HMMTigr TIGR00436 era: 2.4e-69 156-429
IPR006073 GTP binding domain
Molecular Function GO:0005525 GTP binding    
HMMPfam PF01926 MMR_HSR1 1.3e-20 158-275
IPR009019 K homology domain, prokaryotic type
Molecular Function GO:0003723 RNA binding    
superfamily SSF54814 Prokaryotic 1.1e-41 331-448
IPR015946 K homology domain-like, alpha/beta
Gene3D G3DSA:3.30.300.20 no description 8.2e-33 338-442
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.4e-43 156-356
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.3e-40 149-323
HMMPanther PTHR11649 MSS1/TRME-RELATED 3.4e-112 99-451
HMMPanther PTHR11649:SF3 GTP-BINDING 3.4e-112 99-451
Seg seg seg NA 6-16
17-36
94-113
Wolf-PSORT
Lj4g3v0975570.2	chlo 7, mito 6.5, cyto_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0975570.2