Miyakogusa Predicted Gene

Lj4g3v0335810.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K2U6_SOYBN 1093 81.4 89.1 (tr|I1K2U6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G62260.1 788 60.5 79.1 | Symbols: MEF9 | mitochondrial editing factor 9 | chr1:22997826-22999796 REVERSE LENGTH=656
Medicago Medtr4g094402.5 1063 79.8 88.0 | pentatricopeptide (PPR) repeat protein | HC | chr4:37900455-37904049 | 20130731
Soybean Glyma08g08250.1 1040 84.6 91.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0335810.2 length: 652 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.59 43-65
164-192
197-218
233-257
276-304
308-333
441-464
545-567
HMMPfam PF12854 PPR_1 3.2e-10 130-159
HMMPfam PF13041 PPR_2 1.2e-11 66-97
366-413
467-515
HMMTigr TIGR00756 PPR: 8.3e-08 68-99
133-162
233-257
276-305
308-332
339-366
369-402
470-503
ProfileScan PS51375 PPR 6.939 66-100
35-65
131-165
101-130
230-260
193-223
274-308
367-401
336-366
309-335
468-502
436-466
503-538
539-569
605-639
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-11 598-625
no_ID  
HMMPanther PTHR24015 FAMILY 2e-204 10-647
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 2e-204 10-647
superfamily SSF48452 TPR-like 0.0012 279-393
Wolf-PSORT
Lj4g3v0335810.2	chlo 7.5, chlo_mito 6.33333, mito 4, cyto_mito 2.83333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0335810.2