Miyakogusa Predicted Gene
- Lj4g3v0335810.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0335810.2 Non Chatacterized Hit- tr|I1KR83|I1KR83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45105
PE,84.64,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PENTAT,CUFF.46848.2
(652 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 788 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 524 e-149
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 446 e-125
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-116
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 376 e-104
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 1e-98
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 1e-89
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 4e-89
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 4e-89
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 320 1e-87
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 316 4e-86
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 1e-85
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 313 4e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 9e-85
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 309 4e-84
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 5e-84
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 308 6e-84
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 302 4e-82
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 299 3e-81
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 298 6e-81
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 7e-81
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 6e-80
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 295 9e-80
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 294 1e-79
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 293 2e-79
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 293 3e-79
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 5e-79
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 1e-78
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 290 2e-78
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 289 4e-78
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 5e-78
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 1e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 286 3e-77
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 8e-77
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 284 1e-76
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 280 2e-75
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 280 2e-75
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 280 3e-75
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 280 3e-75
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 3e-75
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 279 5e-75
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 2e-74
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 9e-74
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 6e-73
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 7e-73
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 267 2e-71
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 3e-70
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 2e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 255 5e-68
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 252 5e-67
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 252 6e-67
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 7e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 246 3e-65
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 5e-65
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 9e-65
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 244 2e-64
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 241 1e-63
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 2e-63
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 5e-63
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 239 6e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 239 6e-63
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 234 2e-61
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 9e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 9e-59
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 224 2e-58
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 5e-58
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 219 4e-57
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 6e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 194 2e-49
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 8e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 6e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 4e-40
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 2e-36
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 143 4e-34
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 7e-34
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 2e-33
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 6e-33
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 6e-32
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 135 7e-32
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 3e-31
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 133 4e-31
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 5e-31
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 130 2e-30
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 130 3e-30
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 124 3e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 3e-28
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 5e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 122 6e-28
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 122 8e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 112 8e-25
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 1e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 2e-24
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 9e-24
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 103 3e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 103 5e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 2e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 97 3e-20
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 97 4e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 95 1e-19
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 95 2e-19
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 92 2e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 5e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 85 2e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 81 2e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 7e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 79 8e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 76 7e-14
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 3e-13
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 5e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 3e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 6e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 6e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 9e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 49 8e-06
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/613 (60%), Positives = 485/613 (79%), Gaps = 2/613 (0%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
NK+++ +IR+G ++EAR F+ ++ RNTVTWNT+ISG+VKRRE+ +AR+LFD MP+RD+V
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
+WN +ISGY SC G +F+EE RKLFDEMP RD SWNT+ISGYAKN R+ +AL LF+ MP
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
ERNAVS +A+ITGF NG+VDSAV F++MP DS+ L AL++GL++N L AA +L +
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQ 223
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD--GKEDGRRFRRNVVS 277
G G+ DLV AYNTLI GYGQ G+VE AR LFD+IP+ GD G E RF +NVVS
Sbjct: 224 YGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVS 283
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDA 337
WNSM+ Y+KVGD+VSAR LFD M +RDT +WNTMI GYV +S ME+A LF EMP+ DA
Sbjct: 284 WNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
SWN ++SG+A +G++++A+ +FE+ P+K+ +SWNS+IA Y+KN+DYK A++LF +M +E
Sbjct: 344 HSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIE 403
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
GEKPD HTL+S+LS TGLV+L LG QMHQ+V KTVIPD+P++N+LITMYSRCG I E+
Sbjct: 404 GEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESR 463
Query: 458 TVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHA 517
+F+EMK ++VITWNAMIGGYA HG A +AL LF MK I+P++ITF+SVLNACAHA
Sbjct: 464 RIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHA 523
Query: 518 GLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGA 577
GLV+E + QF SM++ Y IEP++EH++S V++ QGQ +EAM +I SMP +PDK VWGA
Sbjct: 524 GLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGA 583
Query: 578 LLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNV 637
LL +CR++ NV LA VAA+A+ LEPESS PYVLLYNMYA++ LWD+A +VR+ ME K +
Sbjct: 584 LLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRI 643
Query: 638 KKQTGYSWVDSSN 650
KK+ G SWVDSS
Sbjct: 644 KKERGSSWVDSST 656
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/619 (42%), Positives = 394/619 (63%), Gaps = 24/619 (3%)
Query: 34 SLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM 93
S + +WN IS +RTGR +EA F M ++V++N +ISG+++ E AR+LFDEM
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 94 PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
P+RD+VSWN++I GY ++ + + R+LF+ MPERD SWNT++SGYA+NG +D A
Sbjct: 122 PERDLVSWNVMIKGYVR---NRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMA 213
+FD MPE+N VS NA+++ ++ N ++ A FK S + L+ G V+ ++ A
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEA 238
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
D V ++NT+I GY QSGK++EAR+LFD P +
Sbjct: 239 RQFFDSMNVRD------VVSWNTIITGYAQSGKIDEARQLFDESP-------------VQ 279
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP 333
+V +W +M+ Y++ + ARELFD M ER+ +WN M++GYVQ ME A +LF MP
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP 339
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
+ +WN++I+G+AQ G + AK+ F++MP+++ +SW ++IAGY ++ A+ LF Q
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGA 452
M+ EG + +R + SS LS C +V L LGKQ+H +LV + N+L+ MY +CG+
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
I EA +F EM KD+++WN MI GY+ HG AL F+ MKR + P T ++VL+
Sbjct: 460 IEEANDLFKEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDK 572
AC+H GLV++GR+ F +M DYG+ P +H+A VD+LGR G L++A +L+ +MP +PD
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 573 AVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLM 632
A+WG LLG+ RVHGN ELA+ AA + ++EPE+SG YVLL N+YA+ W D ++RV M
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 633 EEKNVKKQTGYSWVDSSNR 651
+K VKK GYSW++ N+
Sbjct: 639 RDKGVKKVPGYSWIEIQNK 657
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 185/338 (54%), Gaps = 18/338 (5%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
E+ L WN + ++ ++ EAR FFDSM R+ V+WNT+I+G+ + +I +ARQLFD
Sbjct: 215 ENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 92 EMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
E P +D+ +W ++SGY ++ VEE R+LFD+MPER+ VSWN +++GY + RM+ A
Sbjct: 275 ESPVQDVFTWTAMVSGYIQ---NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMA 331
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELD 211
+LFD MP RN + N +ITG+ G + A F +MP+ D S +A+I+G ++G
Sbjct: 332 KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 212 MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
A + ++ EG ++++ ++ +E ++L R+ G E G
Sbjct: 392 EALRLFVQM--EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK---GGYETG--- 443
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKE 331
N++++ Y K G I A +LF M +D +WNTMI+GY + E A + F+
Sbjct: 444 ---CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 500
Query: 332 MP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQ 365
M PD + +++S + G + + +F M Q
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 152/301 (50%), Gaps = 38/301 (12%)
Query: 302 GERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFE 361
G+ D WN IS Y++ EA ++FK MP ++S+N +ISG+ + G+ ++A+ F+
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 362 RMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS--SVLS--VCTGLV 417
MP+++L+SWN +I GY +N + A ELF M P+R S ++LS G V
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIM------PERDVCSWNTMLSGYAQNGCV 173
Query: 418 DLYLGKQMHQLVTKTVIPDLPIN-----NSLITMYSRCGAIGEACTVFNEMKFYKDVITW 472
D ++V +P N+L++ Y + + EAC +F + + +++W
Sbjct: 174 D----------DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA-LVSW 222
Query: 473 NAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN-SMI 531
N ++GG+ V+A + F M + +++ +++ A +G ++E R+ F+ S +
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
D V + + V + ++EA +L + MP + ++ W A+L +E+A
Sbjct: 279 QD------VFTWTAMVSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAGYVQGERMEMA 331
Query: 592 Q 592
+
Sbjct: 332 K 332
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/585 (39%), Positives = 363/585 (62%), Gaps = 25/585 (4%)
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP 128
T N I+ + +I +AR+LFD + I SWN +++GYF+ + + RKLFDEMP
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFA---NLMPRDARKLFDEMP 75
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
+R+ +SWN ++SGY KNG +D+A K+FD MPERN VS A++ G++ NG VD A F +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 189 MPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
MPE + S + ++ G +++G +D A + D D A ++I G + G+V+
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDN------IARTSMIHGLCKEGRVD 189
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCA 308
EAR +FD + R+V++W +M+ Y + + AR++FD M E+ +
Sbjct: 190 EAREIFDEMSE-------------RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 309 WNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
W +M+ GYVQ +E+A +LF+ MP ++ N++ISG Q G++ A+ F+ M ++N
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 369 ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-Q 427
SW ++I +++N A++LF MQ +G +P TL S+LSVC L L+ GKQ+H Q
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 428 LVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVD 487
LV D+ + + L+TMY +CG + ++ +F+ KD+I WN++I GYASHGL +
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHGLGEE 415
Query: 488 ALELFKQMKRL-KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
AL++F +M P +TF++ L+AC++AG+VEEG + + SM + +G++P H+A
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
Query: 547 VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
VD+LGR G+ EAM++I+SM V+PD AVWG+LLG+CR H +++A+ A+ LI +EPE+S
Sbjct: 476 VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENS 535
Query: 607 GPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
G Y+LL NMYA+ W D +R LM+ + V+K G SW + N+
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK 580
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 254/522 (48%), Gaps = 74/522 (14%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
+S + WN ++ +AR FD M RN ++WN L+SG++K EI +AR++FD
Sbjct: 44 DSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFD 103
Query: 92 EMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
MP+R++VSW ++ GY + V+ LF +MPE++ VSW ++ G+ ++GR+D A
Sbjct: 104 LMPERNVVSWTALVKGYVH---NGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDA 160
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELD 211
KL++ +P+++ ++ ++I G G VD A F M E + + +++G +N +D
Sbjct: 161 CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVD 220
Query: 212 MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
A I D ++ +++ GY Q+G++E+A LF+ +P
Sbjct: 221 DARKIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP------------- 261
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKE 331
+ V++ N+M+ + G+I AR +FDSM ER+ +W T+I + + EA LF
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFIL 321
Query: 332 M------PS-PDALSWNSIISGFAQI--------------------------------GD 352
M P+ P +S S+ + A + G+
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLS 411
L +K F+R P K++I WNS+I+GY + + A+++F +M L G KP+ T + LS
Sbjct: 382 LVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS 441
Query: 412 VCT--GLVD--LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
C+ G+V+ L + + M + V P ++ M R G EA + + M
Sbjct: 442 ACSYAGMVEEGLKIYESMESVF--GVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP----TYI 505
D W +++G +H +D E F K ++I P TYI
Sbjct: 500 DAAVWGSLLGACRTHS-QLDVAE-FCAKKLIEIEPENSGTYI 539
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 340/573 (59%), Gaps = 28/573 (4%)
Query: 82 EIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISG 141
+I +AR+ FD + + I SWN I+SGYFS + +E R+LFDEM ER+ VSWN ++SG
Sbjct: 32 KINEARKFFDSLQFKAIGSWNSIVSGYFS---NGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALI 201
Y KN + +A +F+ MPERN VS A++ G++ G V A F RMPE + S + +
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF 148
Query: 202 SGLVRNGELDMAAGI--LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPN 259
GL+ +G +D A + ++ D V A +I G + G+V+EAR +FD +
Sbjct: 149 GGLIDDGRIDKARKLYDMMPVKD--------VVASTNMIGGLCREGRVDEARLIFDEMRE 200
Query: 260 DQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQI 319
RNVV+W +M+ Y + + AR+LF+ M E+ +W +M+ GY
Sbjct: 201 -------------RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLS 247
Query: 320 SDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYD 379
+E+A + F+ MP ++ N++I GF ++G++ A+ F+ M ++ +W +I Y+
Sbjct: 248 GRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 380 KNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLP 438
+ A++LF+QMQ +G +P +L S+LSVC L L G+Q+H LV D+
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVY 367
Query: 439 INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRL 498
+ + L+TMY +CG + +A VF+ KD+I WN++I GYASHGL +AL++F +M
Sbjct: 368 VASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIFHEMPSS 426
Query: 499 KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQE 558
P +T I++L AC++AG +EEG F SM + + + P VEH++ VD+LGR GQ+ +
Sbjct: 427 GTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Query: 559 AMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYAN 618
AM+LI SM +KPD VWGALLG+C+ H ++LA+VAA+ L EP+++G YVLL ++ A+
Sbjct: 487 AMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINAS 546
Query: 619 LELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
W D VR M NV K G SW++ +
Sbjct: 547 RSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKK 579
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 234/485 (48%), Gaps = 63/485 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN +S G EAR FD M RN V+WN L+SG++K R I +AR +F+ MP+R++
Sbjct: 51 WNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV 110
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
VSW ++ GY V E LF MPER+ VSW + G +GR+D+A KL+D M
Sbjct: 111 VSWTAMVKGYMQ---EGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM 167
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILL 218
P ++ V+S +I G G VD A F M E + + + +I+G +N +D+A +
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
+ E ++ +++ GY SG++E+A F+ +P + V++
Sbjct: 228 VMPEKTE------VSWTSMLLGYTLSGRIEDAEEFFEVMP-------------MKPVIAC 268
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM------ 332
N+M++ + +VG+I AR +FD M +RD W MI Y + EA LF +M
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 333 PS-PDALSWNSIISGFAQI--------------------------------GDLKVAKDF 359
PS P +S S+ + A + G+L AK
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
F+R K++I WNS+I+GY + + A+++F +M G P++ TL ++L+ C+ L
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 420 YLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
G ++ + + V P + + + M R G + +A + M D W A++G
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 478 GYASH 482
+H
Sbjct: 509 ACKTH 513
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 151/293 (51%), Gaps = 18/293 (6%)
Query: 287 KVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISG 346
++G I AR+ FDS+ + +WN+++SGY +EA +LF EM + +SWN ++SG
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+ + + A++ FE MP++N++SW +++ GY + A LF +M P+R+ +
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEV 142
Query: 407 SSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFY 466
S + + GL+D + +L + D+ + ++I R G + EA +F+EM+
Sbjct: 143 SWTV-MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR-E 200
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
++V+TW MI GY + A +LF+ M T +++ S+L +G +E+
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
F M ++P + A V G G++ +A + + M + D A W ++
Sbjct: 257 FEVM----PMKPVIACNAMIVG-FGEVGEISKARRVFDLMEDR-DNATWRGMI 303
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 361/647 (55%), Gaps = 45/647 (6%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDE 92
S+ + Q N +IS R G L EA F M +R+ V+W +IS + + +++KA Q+FDE
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDE 106
Query: 93 MPQRDIVSWNLIISGYFS--CCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQ 150
MP R S+N +I+ C K E LF ++PE++ VS+ T+I+G+ + GR D+
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYE----LFCDIPEKNAVSYATMITGFVRAGRFDE 162
Query: 151 ALKLFDAMPE--RNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG 208
A L+ P R++V+SN +++G+L G + AV F+ M + S S+++ G + G
Sbjct: 163 AEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK--- 265
+ A + D V + +I GY ++G E+ LF R+ +GD K
Sbjct: 223 RIVDARSLF------DRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM-RQEGDVKVNS 275
Query: 266 ----------EDGRRFRR---------------NVVSWNSMMMCYVKVGDIVSARELFDS 300
D R+R ++ NS+M Y K+G + A+ +F
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 301 MGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
M +D+ +WN++I+G VQ + EA +LF++MP D +SW +I GF+ G++ + F
Sbjct: 336 MKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 361 ERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLY 420
MP+K+ I+W ++I+ + N Y+ A+ F +M + P+ +T SSVLS L DL
Sbjct: 396 GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLI 455
Query: 421 LGKQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGY 479
G Q+H V K ++ DL + NSL++MY +CG +A +F+ + +++++N MI GY
Sbjct: 456 EGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-EPNIVSYNTMISGY 514
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR 539
+ +G AL+LF ++ P +TF+++L+AC H G V+ G + F SM + Y IEP
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 540 VEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALI 599
+H+A VD+LGR G L +A +LI++MP KP VWG+LL + + H V+LA++AA+ LI
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI 634
Query: 600 SLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
LEP+S+ PYV+L +Y+ + D +R+ + + K +KK G SW+
Sbjct: 635 ELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 327/539 (60%), Gaps = 23/539 (4%)
Query: 112 CGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER-NAVSSNAVI 170
C + E RKLFD +PERD V+W VI+GY K G M +A +LFD + R N V+ A++
Sbjct: 57 CKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMV 116
Query: 171 TGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL 230
+G+L + + A F+ MPE + S + +I G ++G +D A + DE
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF------DEMPERN 170
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
+ ++N+++ Q G+++EA LF+R+P RR+VVSW +M+ K G
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMP-------------RRDVVSWTAMVDGLAKNGK 217
Query: 291 IVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQI 350
+ AR LFD M ER+ +WN MI+GY Q + ++EA +LF+ MP D SWN++I+GF +
Sbjct: 218 VDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRN 277
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSV 409
++ A F+RMP+KN+ISW ++I GY +N++ + A+ +FS+M +G KP+ T S+
Sbjct: 278 REMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTV-IPDLPINNSLITMYSRCGAIGEACTVF-NEMKFYK 467
LS C+ L L G+Q+HQL++K+V + + ++L+ MYS+ G + A +F N + +
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
D+I+WN+MI YA HG +A+E++ QM++ P+ +T++++L AC+HAGLVE+G F
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFF 457
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
++ D + R EH+ VD+ GR G+L++ + IN + ++ +GA+L +C VH
Sbjct: 458 KDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNE 517
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
V +A+ + ++ + +G YVL+ N+YA ++A +R+ M+EK +KKQ G SWV
Sbjct: 518 VSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 275/545 (50%), Gaps = 111/545 (20%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR-DIVSW 101
I L + G+++EAR FD + R+ VTW +I+G++K ++ +AR+LFD + R ++V+W
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112
Query: 102 NLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
++SGY SK + LF EMPER+ VSWNT+I GYA++GR+D+AL+LFD MPER
Sbjct: 113 TAMVSGYLR---SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER 169
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG 221
N VS N+++ + G +D A+ F+RMP D S +A++ GL +NG++D A L +C
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARR-LFDCM 228
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
+ ++N +I GY Q+ +++EA +LF +P R+ SWN+M
Sbjct: 229 PERN-----IISWNAMITGYAQNNRIDEADQLFQVMP-------------ERDFASWNTM 270
Query: 282 MMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM-----PSPD 336
+ +++ ++ A LFD M E++ +W TMI+GYV+ + EEA +F +M P+
Sbjct: 271 ITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPN 330
Query: 337 ALSWNSIISG-----------------------------------FAQIGDLKVAKDFFE 361
++ SI+S +++ G+L A+ F+
Sbjct: 331 VGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD 390
Query: 362 R--MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLV 417
+ Q++LISWNS+IA Y + K AIE+++QM+ G KP T ++L C+ GLV
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLV 450
Query: 418 DLYLGKQMHQLVTKTVIPDLPINNSL----------------ITMYSRC----------G 451
+ K M LP+ +T + C G
Sbjct: 451 E----KGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 452 AIGEACTVFNEMKFYKDVI------------TWNAMIGGYASHGLAVDALELFKQMKR-- 497
AI AC V NE+ K+V+ T+ M YA++G +A E+ +MK
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Query: 498 LKIHP 502
LK P
Sbjct: 567 LKKQP 571
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 245/498 (49%), Gaps = 86/498 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR-NTVTWNTLISGHVKRREIAKARQLFDEMPQRD 97
W I+ I+ G + EAR FD + R N VTW ++SG+++ ++++ A LF EMP+R+
Sbjct: 80 WTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERN 139
Query: 98 IVSWNLIISGY-----------------------FSCCGSKFVEEGR-----KLFDEMPE 129
+VSWN +I GY ++ V+ GR LF+ MP
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
RD VSW ++ G AKNG++D+A +LFD MPERN +S NA+ITG+ N +D A F+ M
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 190 PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
PE D AS + +I+G +RN E++ A CG D V ++ T+I GY ++ + EE
Sbjct: 260 PERDFASWNTMITGFIRNREMNKA------CGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 250 ARRLFDRIPNDQG------------------DGKEDGRRF---------RRNVVSWNSMM 282
A +F ++ D G +G++ ++N + ++++
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 283 MCYVKVGDIVSARELFDS--MGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPD 336
Y K G++++AR++FD+ + +RD +WN+MI+ Y +EA +++ +M P
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 337 ALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ--- 393
A+++ +++ + G ++ +FF K+L+ SL + E Y ++L +
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFF-----KDLVRDESLPL---REEHYTCLVDLCGRAGR 485
Query: 394 -------MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITM 446
+ + + R ++LS C ++ + K++ + V +T D + +
Sbjct: 486 LKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNI 545
Query: 447 YSRCGAIGEACTVFNEMK 464
Y+ G EA + +MK
Sbjct: 546 YAANGKREEAAEMRMKMK 563
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 134/269 (49%), Gaps = 50/269 (18%)
Query: 312 MISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERM-PQKNLIS 370
+I ++ + EA KLF +P D ++W +I+G+ ++GD++ A++ F+R+ +KN+++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
W ++++GY +++ A LF +M P+R+ +S
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSW---------------------- 143
Query: 431 KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
N++I Y++ G I +A +F+EM +++++WN+M+ G +A+
Sbjct: 144 ----------NTMIDGYAQSGRIDKALELFDEMP-ERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 491 LFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDIL 550
LF++M R + +++ ++++ A G V+E RR F+ M E + + + +
Sbjct: 193 LFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCM-----PERNIISWNAMITGY 243
Query: 551 GRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ ++ EA L MP + D A W ++
Sbjct: 244 AQNNRIDEADQLFQVMPER-DFASWNTMI 271
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/487 (40%), Positives = 302/487 (62%), Gaps = 21/487 (4%)
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEG 226
N +I + +GD+D A+ F M ++ + ++L+ G+ ++ M A L DE
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF-----DEI 119
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV 286
+YN +++ Y ++ E+A+ FDR+P ++ SWN+M+ Y
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP-------------FKDAASWNTMITGYA 166
Query: 287 KVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISG 346
+ G++ ARELF SM E++ +WN MISGY++ D+E+AS FK P ++W ++I+G
Sbjct: 167 RRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITG 226
Query: 347 FAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+ + +++A+ F+ M KNL++WN++I+GY +N + ++LF M EG +P+
Sbjct: 227 YMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSG 286
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMK 464
LSS L C+ L L LG+Q+HQ+V+K T+ D+ SLI+MY +CG +G+A +F MK
Sbjct: 287 LSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK 346
Query: 465 FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
KDV+ WNAMI GYA HG A AL LF++M KI P +ITF++VL AC HAGLV G
Sbjct: 347 -KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGM 405
Query: 525 RQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRV 584
F SM+ DY +EP+ +H+ VD+LGR G+L+EA+ LI SMP +P AV+G LLG+CRV
Sbjct: 406 AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRV 465
Query: 585 HGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
H NVELA+ AA+ L+ L +++ YV L N+YA+ W+D RVR M+E NV K GYS
Sbjct: 466 HKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Query: 645 WVDSSNR 651
W++ N+
Sbjct: 526 WIEIRNK 532
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 196/367 (53%), Gaps = 39/367 (10%)
Query: 28 TNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVK-RREIAKA 86
T ++ + NK I+ +R+G + A F M+ +NT+TWN+L+ G K + +A
Sbjct: 53 TKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEA 112
Query: 87 RQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNG 146
QLFDE+P+ D S+N+++S Y E+ + FD MP +D SWNT+I+GYA+ G
Sbjct: 113 HQLFDEIPEPDTFSYNIMLSCYVRNVN---FEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
M++A +LF +M E+N VS NA+I+G++ GD++ A FFK P + +A+I+G ++
Sbjct: 170 EMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI------PND 260
++++A + D + + +N +I+GY ++ + E+ +LF + PN
Sbjct: 230 AKKVELAEAMF-----KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 261 QG-----------DGKEDGRRFRR---------NVVSWNSMMMCYVKVGDIVSARELFDS 300
G + GR+ + +V + S++ Y K G++ A +LF+
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 301 MGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVA 356
M ++D AWN MISGY Q + ++A LF+EM PD +++ +++ G + +
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 357 KDFFERM 363
+FE M
Sbjct: 405 MAYFESM 411
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI-VSW 101
IS + G L +A F+ MK ++ V WN +ISG+ + KA LF EM I W
Sbjct: 326 ISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDW 385
Query: 102 NLIISGYFSCCGSKFVEEGRKLFDEM-------PERDCVSWNTVISGYAKNGRMDQALKL 154
++ +C + V G F+ M P+ D + ++ + G++++ALKL
Sbjct: 386 ITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKL 443
Query: 155 FDAMPERNAVSSNAVITGFLLNG 177
+MP R +A + G LL
Sbjct: 444 IRSMPFR----PHAAVFGTLLGA 462
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/601 (35%), Positives = 329/601 (54%), Gaps = 70/601 (11%)
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
+I N +I Y S CGS +E+GR++FD+MP+R+ +WN+V++G K G +D+A LF
Sbjct: 54 EIFIQNRLIDAY-SKCGS--LEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFR 110
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDM 212
+MPER+ + N++++GF + + A+ +F M + + S ++++S +G DM
Sbjct: 111 SMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC--SGLNDM 168
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
G+ + V + L+ Y + G V +A+R+FD + GD
Sbjct: 169 NKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM----GD--------- 215
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGE----------------------------- 303
RNVVSWNS++ C+ + G V A ++F M E
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 304 -----------RDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGD 352
D N + Y + S ++EA +F MP + ++ S+ISG+A
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAS 335
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
K A+ F +M ++N++SWN+LIAGY +N + + A+ LF ++ E P ++ +++L
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKA 395
Query: 413 CTGLVDLYLGKQMHQLVTKTVIP-------DLPINNSLITMYSRCGAIGEACTVFNEMKF 465
C L +L+LG Q H V K D+ + NSLI MY +CG + E VF +M
Sbjct: 396 CADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-M 454
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
+D ++WNAMI G+A +G +ALELF++M P +IT I VL+AC HAG VEEGR
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
F+SM D+G+ P +H+ VD+LGR G L+EA +I MP++PD +WG+LL +C+VH
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 586 GNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
N+ L + A+ L+ +EP +SGPYVLL NMYA L W+D VR M ++ V KQ G SW
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 646 V 646
+
Sbjct: 635 I 635
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 221/503 (43%), Gaps = 70/503 (13%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
++ WN ++ L + G L EA + F SM R+ TWN+++SG + +A F M +
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 96 RDIVSWNLIISGYFSCC-GSKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQ 150
V + S C G + +G ++ + + D + ++ Y+K G ++
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 151 ALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVR 206
A ++FD M +RN VS N++IT F NG A+ F+ M E D +L+++IS
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+ + + D+ ++D++ + N + Y + +++EAR +FD +P
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILS-NAFVDMYAKCSRIKEARFIFDSMP-------- 316
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
RNV++ SM+ Y +AR +F M ER+ +WN +I+GY Q + EEA
Sbjct: 317 -----IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 327 KLF----KEMPSPDALSWNSIISGFAQIGDLKVAKD------------------------ 358
LF +E P S+ +I+ A + +L +
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 359 -----------------FFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
F +M +++ +SWN++I G+ +N A+ELF +M GEKP
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKP 491
Query: 402 DRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTV 459
D T+ VLS C + G+ +T+ V P ++ + R G + EA ++
Sbjct: 492 DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSM 551
Query: 460 FNEMKFYKDVITWNAMIGGYASH 482
EM D + W +++ H
Sbjct: 552 IEEMPMQPDSVIWGSLLAACKVH 574
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 166/300 (55%), Gaps = 33/300 (11%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFK 330
F + N ++ Y K G + R++FD M +R+ WN++++G ++ ++EA LF+
Sbjct: 51 FSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFR 110
Query: 331 EMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
MP D +WNS++SGFAQ +D+ E+ A+
Sbjct: 111 SMPERDQCTWNSMVSGFAQ----------------------------HDRCEE---ALCY 139
Query: 391 FSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSR 449
F+ M EG + ++ +SVLS C+GL D+ G Q+H L+ K+ + D+ I ++L+ MYS+
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
CG + +A VF+EM ++V++WN++I + +G AV+AL++F+ M ++ P +T S
Sbjct: 200 CGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
V++ACA ++ G+ ++ + + + +FVD+ + +++EA + +SMP++
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/654 (34%), Positives = 360/654 (55%), Gaps = 54/654 (8%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W +S +TG L EAR F+ M RN VT N +++G+VK R + +A LF EMP +++
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNV 138
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
VSW ++++ + C E+ +LFDEMPER+ VSWNT+++G +NG M++A ++FDAM
Sbjct: 139 VSWTVMLT---ALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILL 218
P R+ VS NA+I G++ N ++ A F M E + + ++++ G R G++ A +
Sbjct: 196 PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFC 255
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR--------- 269
E + + + ++ +I+G+ + EA LF + D +G
Sbjct: 256 EMPERN------IVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 270 -----RFRR-------NVVS--W----------NSMMMCYVKVGDIVSARELFDSMGERD 305
FRR V+S W S++ Y G I SA+ L + +
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEMPS-PDALSWNSIISGFAQIGDLKVAKDFFERMP 364
+C N +I+ Y++ D+E A LF+ + S D +SW S+I G+ + GD+ A F+++
Sbjct: 370 SC--NIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
K+ ++W +I+G +NE + A L S M G KP T S +LS +L GK
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 425 MHQLVTKTVI---PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
+H ++ KT PDL + NSL++MY++CGAI +A +F +M KD ++WN+MI G +
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMIMGLSH 546
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
HGLA AL LFK+M P +TF+ VL+AC+H+GL+ G F +M Y I+P ++
Sbjct: 547 HGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGID 606
Query: 542 HFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSC----RVHGNVELAQVAAQA 597
H+ S +D+LGR G+L+EA + I+++P PD V+GALLG C R +A+ AA
Sbjct: 607 HYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMR 666
Query: 598 LISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
L+ L+P ++ +V L N+YA L D + +R M K VKK G SWV + R
Sbjct: 667 LLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGR 720
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 259/538 (48%), Gaps = 82/538 (15%)
Query: 119 EGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFL 174
R L D++P+R ++ W +++S YAK G +D+A LF+ MPERN V+ NA++TG++
Sbjct: 60 HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYV 119
Query: 175 LNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY 234
++ A F+ MP+ + S + +++ L +G + A + DE V ++
Sbjct: 120 KCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELF------DEMPERNVVSW 172
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
NTL+ G ++G +E+A+++FD +P+ R+VVSWN+M+ Y++ + A
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPS-------------RDVVSWNAMIKGYIENDGMEEA 219
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
+ LF M E++ W +M+ GY + D+ EA +LF EMP + +SW ++ISGFA
Sbjct: 220 KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA------ 273
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ--LEGEKPDRHTLSSVLSV 412
WN L Y+ A+ LF +M+ ++ P+ TL S+
Sbjct: 274 ----------------WNEL---------YREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 413 CTGLVDLY--LGKQMHQLVT----KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFY 466
C GL + LG+Q+H V +TV D + SL+ MY+ G I A ++ NE F
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE-SF- 366
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
D+ + N +I Y +G A LF+++K L +++ S+++ AG V
Sbjct: 367 -DLQSCNIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGL 422
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM---PVKPDKAVWGALLGSCR 583
F + + G+ V + L + EA L++ M +KP + + LL S
Sbjct: 423 FQKLHDKDGVTWTV-----MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 584 VHGNVELAQVAAQALISLEPESSGPYVLLYN----MYANLELWDDAERVRVLMEEKNV 637
N++ + +I+ P ++L N MYA +DA + M +K+
Sbjct: 478 ATSNLDQGK-HIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDT 534
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 163/364 (44%), Gaps = 75/364 (20%)
Query: 251 RRLF-DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE------------- 296
RR + D+IPN +RR + ++++ + G +V AR
Sbjct: 25 RRYYGDKIPNYGS--------YRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINR 76
Query: 297 ----------------------LFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS 334
LF+ M ER+ N M++GYV+ M EA LF+EMP
Sbjct: 77 VVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK 136
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
+ +SW +++ G + A + F+ MP++N++SWN+L+ G +N D + A ++F M
Sbjct: 137 -NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 395 QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINN-----SLITMYSR 449
P R +S ++ Y+ + K + D+ N S++ Y R
Sbjct: 196 ------PSRDVVS-----WNAMIKGYIENDGME-EAKLLFGDMSEKNVVTWTSMVYGYCR 243
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR--LKIHPTYITF 507
G + EA +F EM +++++W AMI G+A + L +AL LF +MK+ + P T
Sbjct: 244 YGDVREAYRLFCEMP-ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETL 302
Query: 508 ISVLNACAHAGLVEEGRR---QFNSMINDYGIEPRVEH----FASFVDILGRQGQLQEAM 560
IS+ AC GL E RR Q ++ + G E V+H S V + G + A
Sbjct: 303 ISLAYAC--GGLGVEFRRLGEQLHAQVISNGWET-VDHDGRLAKSLVHMYASSGLIASAQ 359
Query: 561 DLIN 564
L+N
Sbjct: 360 SLLN 363
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 136/298 (45%), Gaps = 51/298 (17%)
Query: 7 RLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKH-R 65
RL++ L S GL + ++ NES L N I+ ++ G L A T F+ +K
Sbjct: 340 RLAK-SLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLH 398
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC-------------- 111
+ V+W ++I G+++ ++++A LF ++ +D V+W ++ISG
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV 458
Query: 112 -CGSK-----------------FVEEGRKLFDEMPER------DCVSWNTVISGYAKNGR 147
CG K +++G+ + + + D + N+++S YAK G
Sbjct: 459 RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGA 518
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISG 203
++ A ++F M +++ VS N++I G +G D A+ FK M + +S + ++S
Sbjct: 519 IEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDL---VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+G + LE + + + + Y ++I G++GK++EA +P
Sbjct: 579 CSHSGLITRG----LELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 358 bits (918), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 224/656 (34%), Positives = 330/656 (50%), Gaps = 98/656 (14%)
Query: 67 TVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDE 126
+ N L+ + + ++ AR LFDEMP R+ SWN +I GY + G K + FD
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS-GEK--GTSLRFFDM 118
Query: 127 MPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF 186
MPERD SWN V+SG+AK G + A +LF+AMPE++ V+ N+++ G++LNG + A+ F
Sbjct: 119 MPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF 178
Query: 187 KRM------------------------------------PECDSASLSALISGLVRNGEL 210
K + ECDS S+L++ + G+L
Sbjct: 179 KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
MA+ +L + + D+ H L + LI+GY G+V E+R LFDR N
Sbjct: 239 RMASYMLEQIREPDD--HSL----SALISGYANCGRVNESRGLFDRKSN----------- 281
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-------------------------- 304
R V+ WNSM+ Y+ + A LF+ M
Sbjct: 282 --RCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQ 339
Query: 305 ------------DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGD 352
D +T++ Y + EA KLF E+ S D + NS+I + G
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ AK FER+ K+LISWNS+ G+ +N +E F QM D +LSSV+S
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 413 CTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT 471
C + L LG+Q+ T + D +++SLI +Y +CG + VF+ M D +
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVP 518
Query: 472 WNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI 531
WN+MI GYA++G +A++LFK+M I PT ITF+ VL AC + GLVEEGR+ F SM
Sbjct: 519 WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMK 578
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
D+G P EHF+ VD+L R G ++EA++L+ MP D ++W ++L C +G +
Sbjct: 579 VDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMG 638
Query: 592 QVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ AA+ +I LEPE+S YV L ++A W+ + VR LM E NV K G SW D
Sbjct: 639 KKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 172/336 (51%), Gaps = 20/336 (5%)
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
+V N L+ Y +SGK+ AR LFD +P+ RN SWN+M+ Y+ G
Sbjct: 61 IVIVANHLLQMYSRSGKMGIARNLFDEMPD-------------RNYFSWNTMIEGYMNSG 107
Query: 290 DIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQ 349
+ ++ FD M ERD +WN ++SG+ + ++ A +LF MP D ++ NS++ G+
Sbjct: 108 EKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 350 IGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
G + A F+ + + I+ +++ + E K ++ +Q+ + G + D SS
Sbjct: 168 NGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSS 227
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
+++V DL + M + + + PD ++LI+ Y+ CG + E+ +F+ K +
Sbjct: 228 LVNVYAKCGDLRMASYMLEQIRE---PDDHSLSALISGYANCGRVNESRGLFDR-KSNRC 283
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
VI WN+MI GY ++ + ++AL LF +M R + T +V+NAC G +E G +Q +
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETG-KQMH 341
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
+G+ + ++ +D+ + G EA L +
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFS 377
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 332/617 (53%), Gaps = 30/617 (4%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
R L A FD M R+ + WN ++ +++ KA +LF EM +++ +
Sbjct: 35 RCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVK 94
Query: 108 YFSCCGSK-FVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
C +K EGR++ + E + N++I Y++NG+++ + K+F++M +RN
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILL 218
S N++++ + G VD A+G M C D + ++L+SG G A +L
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
G + ++L+ + G ++ + + I +Q +V
Sbjct: 215 RMQIA--GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ---------LWYDVYVE 263
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLF----KEMPS 334
+++ Y+K G + AR +FD M ++ AWN+++SG +++A L KE
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIK 323
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIEL 390
PDA++WNS+ SG+A +G + A D +M +K N++SW ++ +G KN +++ A+++
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
Query: 391 FSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQL-VTKTVIPDLPINNSLITMYSR 449
F +MQ EG P+ T+S++L + L L+ GK++H + K +I D + +L+ MY +
Sbjct: 384 FIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGK 443
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
G + A +F +K K + +WN M+ GYA G + + F M + P ITF S
Sbjct: 444 SGDLQSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
VL+ C ++GLV+EG + F+ M + YGI P +EH + VD+LGR G L EA D I +M +K
Sbjct: 503 VLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK 562
Query: 570 PDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVR 629
PD +WGA L SC++H ++ELA++A + L LEP +S Y+++ N+Y+NL W+D ER+R
Sbjct: 563 PDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR 622
Query: 630 VLMEEKNVKKQTGYSWV 646
LM V+ Q +SW+
Sbjct: 623 NLMRNNRVRVQDLWSWI 639
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 168/401 (41%), Gaps = 76/401 (18%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----Q 95
N I R G+L +R F+SMK RN +WN+++S + K + A L DEM +
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 96 RDIVSWNLIISGYFSCCGSK---FVEEGRKLFDEMPERDCVS------------------ 134
DIV+WN ++SGY S SK V + ++ P +S
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 135 ---------W------NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
W T+I Y K G + A +FD M +N V+ N++++G +
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 180 DSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
A RM + D+ + ++L SG G+ + A ++ + ++G V ++
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM--KEKGVAPNVVSWT 365
Query: 236 TLIAGYGQSGKVEEARRLFDRI------PNDQG---------------DGKE-DGRRFRR 273
+ +G ++G A ++F ++ PN GKE G R+
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 274 NVVS----WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLF 329
N++ +++ Y K GD+ SA E+F + + +WN M+ GY EE F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 330 KEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
M PDA+++ S++S G ++ +F+ M +
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSR 526
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 219/715 (30%), Positives = 357/715 (49%), Gaps = 107/715 (14%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
I+ IR G+L +AR F M + V WN +ISGH KR A + F M + + S
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 103 LIISGYFSCCG-SKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDA 157
+ S G ++ G + E + S ++++S Y+K +M+ A K+F+A
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 158 MPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDMA 213
+ E+N V NA+I G+ NG+ + F M D + ++L+S + +L+M
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 214 A----------------------GILLECGDGDEGKHDLVQ-------AYNTLIAGYGQS 244
+ + +CG ++ + + +NT+I Y Q
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 245 GKVEEARRLFDR-----IPNDQG------------DGKEDGRRFR---------RNVVSW 278
EA LF R I +D G G++ R++ +
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS---- 334
+S++ Y K G I AR++F S+ E + N +I+GY Q +++EEA LF+EM +
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVN 626
Query: 335 PDALSWNSIIS---------------------GFAQIGDL----------------KVAK 357
P +++ +I+ GF+ G+ +
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACA 686
Query: 358 DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
F E K+++ W +++G+ +N Y+ A++ + +M+ +G PD+ T +VL VC+ L
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLS 746
Query: 418 DLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
L G+ +H L+ D +N+LI MY++CG + + VF+EM+ +V++WN++I
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGI 536
GYA +G A DAL++F M++ I P ITF+ VL AC+HAG V +GR+ F MI YGI
Sbjct: 807 NGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGI 866
Query: 537 EPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQ 596
E RV+H A VD+LGR G LQEA D I + +KPD +W +LLG+CR+HG+ +++A+
Sbjct: 867 EARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAE 926
Query: 597 ALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
LI LEP++S YVLL N+YA+ W+ A +R +M ++ VKK GYSW+D R
Sbjct: 927 KLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQR 981
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 157/631 (24%), Positives = 281/631 (44%), Gaps = 106/631 (16%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLF----DEMPQRDIVSWNL 103
+ R+S+AR F+ + NTV W L SG+VK +A +F DE + D +++
Sbjct: 207 KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT 266
Query: 104 IISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
+I+ Y K + R LF EM D V+WN +ISG+ K G A++ F M + +
Sbjct: 267 VINTYIRLGKLK---DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSV 323
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMP-----ECDSASL---------SALISGLVRNGE 209
S+ + + G V SA+G + ++ L S+L+S + +
Sbjct: 324 KSTRSTL------GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEK 377
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND--------- 260
++ AA + + E K+D+ +N +I GY +G+ + LF + +
Sbjct: 378 MEAAAKVF----EALEEKNDVF--WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 261 --------QGDGKEDGRRFR---------RNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
E G +F +N+ N+++ Y K G + AR++F+ M +
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 304 RDTCAWNTMISGYVQISDMEEASKLFKEMP------------------------------ 333
RD WNT+I YVQ + EA LFK M
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 334 ---------SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDY 384
D + +S+I +++ G +K A+ F +P+ +++S N+LIAGY +N +
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NL 610
Query: 385 KGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP--INNS 442
+ A+ LF +M G P T ++++ C L LG Q H +TK + S
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
L+ MY + EAC +F+E+ K ++ W M+ G++ +G +AL+ +K+M+ + P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS--FVDILGRQGQLQEAM 560
TF++VL C+ + EG R +S+I + + ++ S +D+ + G ++ +
Sbjct: 731 DQATFVTVLRVCSVLSSLREG-RAIHSLI--FHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 561 DLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+ + M + + W +L+ +G E A
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 151/620 (24%), Positives = 273/620 (44%), Gaps = 86/620 (13%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ ++S A FD ++ ++ WN+++S + + K + F + + I S
Sbjct: 107 KCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165
Query: 108 YFSCCGSKF-VEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
S C + VE GR++ M ER+ ++ YAK R+ A ++F+ + + N
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPN 225
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDMAAGILL 218
V + +G++ G + AV F+RM + D + +I+ +R G+L A +
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFG 285
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSG---------------KVEEARRLFDRIPNDQG- 262
E D V A+N +I+G+G+ G V+ R + + G
Sbjct: 286 EMSSPD------VVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 263 ----------DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTM 312
+ N+ +S++ Y K + +A ++F+++ E++ WN M
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 313 ISGYVQISDMEEASKLFKEMPSP----DALSWNSIISG---------------------- 346
I GY + + +LF +M S D ++ S++S
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 347 -------------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
+A+ G L+ A+ FERM ++ ++WN++I Y ++E+ A +LF +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGA 452
M L G D L+S L CT + LY GKQ+H L K + DL +SLI MYS+CG
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
I +A VF+ + + V++ NA+I GY+ + L +A+ LF++M ++P+ ITF +++
Sbjct: 580 IKDARKVFSSLPEWS-VVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA-SFVDILGRQGQLQEAMDLINSMPVKPD 571
AC + G QF+ I G E+ S + + + EA L + +
Sbjct: 638 ACHKPESLTLG-TQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 572 KAVWGALLGSCRVHGNVELA 591
+W ++ +G E A
Sbjct: 697 IVLWTGMMSGHSQNGFYEEA 716
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 228/527 (43%), Gaps = 107/527 (20%)
Query: 82 EIAKARQLFDEMPQRDIVSW----------------------NLIISGYFSCCGSKFVEE 119
++ K+R++FDEMPQR ++ N I+ Y C + E
Sbjct: 57 KLFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE- 115
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
K FD + E+D +WN+++S Y+ G+ + L+ F ++ E N + N +L+
Sbjct: 116 --KQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCA 171
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
F R C S + GL RN CG L+
Sbjct: 172 RETNVEFGRQIHC-----SMIKMGLERNS----------YCG-------------GALVD 203
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
Y + ++ +ARR+F+ I + N V W + YVK G A +F+
Sbjct: 204 MYAKCDRISDARRVFEWIVDP-------------NTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 300 SM---GER-DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKV 355
M G R D A+ T+I+ Y+++ +++A LF EM SPD ++WN +ISG + G V
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
AIE F M+ K R TL SVLS
Sbjct: 311 -------------------------------AIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 416 LVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
+ +L LG +H K + ++ + +SL++MYS+C + A VF ++ DV WNA
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNA 398
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
MI GYA +G + +ELF MK + TF S+L+ CA + +E G QF+S+I
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKK 457
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
+ + + VD+ + G L++A + M D W ++GS
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 33/250 (13%)
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP----INN 441
G +LF ++ E P R L+ L +GK +H +K++I + + N
Sbjct: 54 GQCKLFKSRKVFDEMPQRLALA-----------LRIGKAVH---SKSLILGIDSEGRLGN 99
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
+++ +Y++C + A F+ ++ KDV WN+M+ Y+S G L F + +I
Sbjct: 100 AIVDLYAKCAQVSYAEKQFDFLE--KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P TF VL+ CA VE GR+ SMI G+E + VD+ + ++ +A
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVE--LAQVAAQALISLEPESSGP----YVLLYNM 615
+ + V P+ W +C G V+ L + A + E P +V + N
Sbjct: 217 VFEWI-VDPNTVCW-----TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT 270
Query: 616 YANLELWDDA 625
Y L DA
Sbjct: 271 YIRLGKLKDA 280
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 164/383 (42%), Positives = 235/383 (61%), Gaps = 8/383 (2%)
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM 332
+NVV W SM+ Y+ D+VSAR FD ERD WNTMISGY+++ +M EA LF +M
Sbjct: 57 KNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM 116
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
P D +SWN+++ G+A IGD++ + F+ MP++N+ SWN LI GY +N + F
Sbjct: 117 PCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFK 176
Query: 393 QMQLEGEK-PDRHTLSSVLSVCTGLVDLYLGKQMHQ----LVTKTVIPDLPINNSLITMY 447
+M EG P+ T++ VLS C L GK +H+ L V D+ + N+LI MY
Sbjct: 177 RMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKV--DVNVKNALIDMY 234
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
+CGAI A VF +K +D+I+WN MI G A+HG +AL LF +MK I P +TF
Sbjct: 235 GKCGAIEIAMEVFKGIK-RRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTF 293
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
+ VL AC H GLVE+G FNSM D+ I P +EH VD+L R G L +A++ IN MP
Sbjct: 294 VGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMP 353
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAER 627
VK D +W LLG+ +V+ V++ +VA + LI LEP + +V+L N+Y + +DDA R
Sbjct: 354 VKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAAR 413
Query: 628 VRVLMEEKNVKKQTGYSWVDSSN 650
++V M + KK+ G SW+++ +
Sbjct: 414 LKVAMRDTGFKKEAGVSWIETDD 436
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 179/382 (46%), Gaps = 39/382 (10%)
Query: 46 LIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLII 105
L G ++ A F M +N V W ++I+G++ +++ AR+ FD P+RDIV WN +I
Sbjct: 38 LCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMI 97
Query: 106 SGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
SGY G+ E R LFD+MP RD +SWNTV+ GYA G M+ ++FD MPERN S
Sbjct: 98 SGYIEM-GNML--EARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPECDS-----ASLSALISGLVRNGELDMAAGILLEC 220
N +I G+ NG V +G FKRM + S A+++ ++S + G D +
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYG 214
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
K D V N LI YG+ G +E A +F I RR+++SWN+
Sbjct: 215 ETLGYNKVD-VNVKNALIDMYGKCGAIEIAMEVFKGIK-------------RRDLISWNT 260
Query: 281 MMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS-- 334
M+ G A LF M D + ++ + +E+ F M +
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 335 ---PDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIAGYDKNEDYK----G 386
P+ ++ ++ G L A +F +MP K + + W +L+ ++ YK G
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGA---SKVYKKVDIG 377
Query: 387 AIELFSQMQLEGEKPDRHTLSS 408
+ L ++LE P + S
Sbjct: 378 EVALEELIKLEPRNPANFVMLS 399
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
S ++L+ + +G + A F M +KN++ W S+I GY N+D A F
Sbjct: 25 STESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDL 84
Query: 394 MQLEGEKPDRHTLSSVL--SVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCG 451
P+R VL ++ +G +++ + L + D+ N+++ Y+ G
Sbjct: 85 ------SPERDI---VLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIG 135
Query: 452 AIGEACT-VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM-KRLKIHPTYITFIS 509
+ EAC VF++M ++V +WN +I GYA +G + L FK+M + P T
Sbjct: 136 DM-EACERVFDDMP-ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 510 VLNACAHAGLVEEGR----------------RQFNSMINDYG----IEPRVEHFA----- 544
VL+ACA G + G+ N++I+ YG IE +E F
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 545 ------SFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVE 589
+ ++ L G EA++L + M + PDK + +L +C+ G VE
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVE 307
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 327/643 (50%), Gaps = 77/643 (11%)
Query: 64 HRNTVTW---------NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS 114
H N +T+ N LI + K E+ ARQLFDE+ + D ++ ++SGY C S
Sbjct: 37 HGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGY---CAS 93
Query: 115 KFVEEGRKLFDEMP--ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN----A 168
+ R +F++ P RD V +N +I+G++ N A+ LF M N +
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 169 VITGFLLNGD----------------------------------------VDSAVGFFKR 188
V+ G L D + SA F
Sbjct: 154 VLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDE 213
Query: 189 MPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
+ E D S + +++G V+NG D+ +L +G + LV AYN +I+GY G +
Sbjct: 214 ILEKDERSWTTMMTGYVKNGYFDLGEELL----EGMDDNMKLV-AYNAMISGYVNRGFYQ 268
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCA 308
EA + R+ + + E ++ S++ G + +++ + R+ +
Sbjct: 269 EALEMVRRMVSSGIELDE---------FTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319
Query: 309 W---NTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQ 365
+ N+++S Y + +EA +F++MP+ D +SWN+++SG+ G + AK F+ M +
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 366 KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM 425
KN++SW +I+G +N + ++LFS M+ EG +P + S + C L G+Q
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 426 H-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
H QL+ L N+LITMY++CG + EA VF M D ++WNA+I HG
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGH 498
Query: 485 AVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
+A++++++M + I P IT ++VL AC+HAGLV++GR+ F+SM Y I P +H+A
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 545 SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPE 604
+D+L R G+ +A +I S+P KP +W ALL CRVHGN+EL +AA L L PE
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 605 SSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
G Y+LL NM+A W++ RVR LM ++ VKK+ SW++
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 28/316 (8%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
H N +S + G+ EAR F+ M ++ V+WN L+SG+V I +A+ +F EM +
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAK---------NG 146
++I+SW ++ISG + F EEG KLF M + SG K NG
Sbjct: 380 KNILSWMIMISGLAE---NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
+ A +L + + + NA+IT + G V+ A F+ MP DS S +ALI+ L +
Sbjct: 437 QQYHA-QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+G A + E +G T++ +G V++ R+ FD + E
Sbjct: 496 HGHGAEAVDVYEEM--LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM--------E 545
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCA-WNTMISGYVQISDME-- 323
R + ++ + G A + +S+ + T W ++SG +ME
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 324 --EASKLFKEMPSPDA 337
A KLF +P D
Sbjct: 606 IIAADKLFGLIPEHDG 621
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 229/752 (30%), Positives = 352/752 (46%), Gaps = 164/752 (21%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS 114
A FD M R+ V+WN +I+G+ K ++ KA F+ MP RD+VSWN ++SGY S
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 115 -----KFVEEGRK--LFDEMP-----------------------------ERDCVSWNTV 138
FV+ GR+ FD + D V+ + +
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS---- 194
+ YAK R ++L++F +PE+N+VS +A+I G + N + A+ FFK M + ++
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 195 ----------ASLSAL----------------ISGLVRNGELDMAAGILLECGDG----- 223
A+LS L G+VR LDM A +C +
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA----KCDNMQDAQI 337
Query: 224 --DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND--------------------- 260
D ++ Q+YN +I GY Q +A LF R+ +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 261 -----QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISG 315
Q G +V N+ + Y K + A +FD M RD +WN +I+
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 316 YVQISDMEEASKLFKEM----PSPDALSWNSII--------------------SGFAQIG 351
+ Q E LF M PD ++ SI+ SG A
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNS 517
Query: 352 DL------------------KVAKDFFER------------MPQKNL----ISWNSLIAG 377
+ K+ FF+R M K L +SWNS+I+G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 378 YDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPD 436
Y E + A LF++M G PD+ T ++VL C L LGKQ+H Q++ K + D
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSD 637
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
+ I ++L+ MYS+CG + ++ +F E +D +TWNAMI GYA HG +A++LF++M
Sbjct: 638 VYICSTLVDMYSKCGDLHDSRLMF-EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 497 RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQL 556
I P ++TFIS+L ACAH GL+++G F M DYG++P++ H+++ VDILG+ G++
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 557 QEAMDLINSMPVKPDKAVWGALLGSCRVH-GNVELAQVAAQALISLEPESSGPYVLLYNM 615
+ A++LI MP + D +W LLG C +H NVE+A+ A AL+ L+P+ S Y LL N+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 616 YANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
YA+ +W+ +R M +KK+ G SWV+
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 270/621 (43%), Gaps = 117/621 (18%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WNK I+ ++ + +A +FF+ M R+ V+WN+++SG+++ E K+ ++F +M + I
Sbjct: 117 WNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 99 VSWNLIISGYFSCCGSKFVEE---GRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQA 151
+ C F+E+ G ++ + + D V+ + ++ YAK R ++
Sbjct: 177 EFDGRTFAIILKVCS--FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS--------------ASL 197
L++F +PE+N+VS +A+I G + N + A+ FFK M + ++ A+L
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 198 SAL----------------ISGLVRNGELDMAAGILLECGD-------GDEGKHDLVQAY 234
S L G+VR LDM A +C + D ++ Q+Y
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYA----KCDNMQDAQILFDNSENLNRQSY 350
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N +I GY Q +A LF R+ + G G ++ +S + + V +
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMS-SGLGFDE--------ISLSGVFRACALVKGLSEG 401
Query: 295 RELF----DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQI 350
+++ S D C N I Y + + EA ++F EM DA+SWN+II+ Q
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 461
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G GY+ + LF M +PD T S+L
Sbjct: 462 GK------------------------GYE-------TLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 411 SVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEM------ 463
CTG L G ++H + K+ + + + SLI MYS+CG I EA + +
Sbjct: 491 KACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 464 -------------KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISV 510
+ + ++WN++I GY + DA LF +M + I P T+ +V
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
L+ CA+ G +Q ++ + ++ V ++ VD+ + G L ++ L+ ++
Sbjct: 610 LDTCANLASAGLG-KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRR 667
Query: 571 DKAVWGALLGSCRVHGNVELA 591
D W A++ HG E A
Sbjct: 668 DFVTWNAMICGYAHHGKGEEA 688
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 234/540 (43%), Gaps = 60/540 (11%)
Query: 65 RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLF 124
R+ V++N ++ + R + D + Q + VS + C +E G++
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAH 71
Query: 125 DEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
M N ++ Y + A +FD MP R+ VS N +I G+ + D+
Sbjct: 72 AHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMF 131
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG-DGDEGKHDLVQAYNTLIA 239
A FF MP D S ++++SG ++NGE + + ++ G +G E + +
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
+ + + R+ D +VV+ ++++ Y K V + +F
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDT------------DVVAASALLDMYAKGKRFVESLRVFQ 239
Query: 300 SMGERDTCAWNTMISGYVQISDMEEASKLFKEMP-------------------------- 333
+ E+++ +W+ +I+G VQ + + A K FKEM
Sbjct: 240 GIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRL 299
Query: 334 -------------SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDK 380
+ D + + + +A+ +++ A+ F+ N S+N++I GY +
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPI 439
E A+ LF ++ G D +LS V C + L G Q++ L K+ + D+ +
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 440 NNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK 499
N+ I MY +C A+ EA VF+EM+ +D ++WNA+I + +G + L LF M R +
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 500 IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEA 559
I P TF S+L AC G + G +S++ G+ S +D+ + G ++EA
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 144/262 (54%), Gaps = 5/262 (1%)
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQ 365
T N ++ Y D AS +F +MP D +SWN +I+G+++ D+ A FF MP
Sbjct: 83 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 366 KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM 425
++++SWNS+++GY +N + +IE+F M EG + D T + +L VC+ L D LG Q+
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 426 HQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
H +V + D+ ++L+ MY++ E+ VF + K+ ++W+A+I G + L
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNL 261
Query: 485 AVDALELFKQMKRLKIHPTYITFISVLNACAH-AGLVEEGRRQFNSMINDYGIEPRVEHF 543
AL+ FK+M+++ + + SVL +CA + L G+ +++ +D+ + V
Sbjct: 262 LSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR-- 319
Query: 544 ASFVDILGRQGQLQEAMDLINS 565
+ +D+ + +Q+A L ++
Sbjct: 320 TATLDMYAKCDNMQDAQILFDN 341
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 335/654 (51%), Gaps = 101/654 (15%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY- 108
G L EA FD +K + WN L++ K + + + LF +M +S + + Y
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-----MSSGVEMDSYT 197
Query: 109 FSCCGSKF-----VEEGRKLF-----DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
FSC F V G +L ER+ V N++++ Y KN R+D A K+FD M
Sbjct: 198 FSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEM 256
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILL 218
ER+ +S N++I G++ NG + + F +M L+SG+ E+D+A + +
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQM----------LVSGI----EIDLATIVSV 302
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
G D L +A +++ + F R ED RF
Sbjct: 303 FAGCADSRLISLGRAVHSI-----------GVKACFSR---------ED--RF------C 334
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----S 334
N+++ Y K GD+ SA+ +F M +R ++ +MI+GY + EA KLF+EM S
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 335 PDALS----------------------W-------------NSIISGFAQIGDLKVAKDF 359
PD + W N+++ +A+ G ++ A+
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVD 418
F M K++ISWN++I GY KN A+ LF+ + E PD T++ VL C L
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 419 LYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
G+++H + + D + NSL+ MY++CGA+ A +F+++ KD+++W MI
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIA 573
Query: 478 GYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIE 537
GY HG +A+ LF QM++ I I+F+S+L AC+H+GLV+EG R FN M ++ IE
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 538 PRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQA 597
P VEH+A VD+L R G L +A I +MP+ PD +WGALL CR+H +V+LA+ A+
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 598 LISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+ LEPE++G YVL+ N+YA E W+ +R+R + ++ ++K G SW++ R
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 232/473 (49%), Gaps = 60/473 (12%)
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----------- 190
Y G + +A ++FD + A+ N ++ +GD ++G FK+M
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
C S S S+L S V GE G +L+ G G+ N+L+A Y ++ +V+ A
Sbjct: 199 SCVSKSFSSLRS--VHGGE--QLHGFILKSGFGERN-----SVGNSLVAFYLKNQRVDSA 249
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GERDTC 307
R++FD + R+V+SWNS++ YV G +F M G
Sbjct: 250 RKVFDEMT-------------ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDL 296
Query: 308 AWNTMISGYVQISDMEEASKLF-----------KEMPSPDALSWNSIISGFAQIGDLKVA 356
A T++S + +D S+L K S + N+++ +++ GDL A
Sbjct: 297 A--TIVSVFAGCAD----SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 357 KDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
K F M ++++S+ S+IAGY + A++LF +M+ EG PD +T+++VL+ C
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 417 VDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAM 475
L GK++H+ + + + D+ ++N+L+ MY++CG++ EA VF+EM+ KD+I+WN +
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV-KDIISWNTI 469
Query: 476 IGGYASHGLAVDALELFK-QMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
IGGY+ + A +AL LF ++ + P T VL ACA ++GR ++ +
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 535 GIEPRVEHFA-SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
R H A S VD+ + G L A L + + K D W ++ +HG
Sbjct: 530 YFSDR--HVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 172/382 (45%), Gaps = 25/382 (6%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE-----RDTCAWNTMISGYVQISDMEEA 325
F R+V N+ + + + G++ +A +L G+ R C+ + + + D +E
Sbjct: 57 FDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV 116
Query: 326 SKLFKEMPSPDALSWNSIIS-GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDY 384
+ + S +S + GDLK A F+ + + + WN L+ K+ D+
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 385 KGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDL-PINNSL 443
G+I LF +M G + D +T S V + L ++ G+Q+H + K+ + + NSL
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT 503
+ Y + + A VF+EM +DVI+WN++I GY S+GLA L +F QM I
Sbjct: 237 VAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 504 YITFISVLNACAHAGLVEEGRRQFNSMINDYGIEP---RVEHFA-SFVDILGRQGQLQEA 559
T +SV CA + L+ GR ++ G++ R + F + +D+ + G L A
Sbjct: 296 LATIVSVFAGCADSRLISLGR-----AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 560 MDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVL----LYNM 615
+ M + + + G R LA A + +E E P V + N
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREG----LAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 616 YANLELWDDAERVRVLMEEKNV 637
A L D+ +RV ++E ++
Sbjct: 407 CARYRLLDEGKRVHEWIKENDL 428
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 192/482 (39%), Gaps = 123/482 (25%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI- 98
N ++ ++ R+ AR FD M R+ ++WN++I+G+V K +F +M I
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRMDQALK 153
+ I+S + C S+ + GR + + + C S NT++ Y+K G +D A
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVR--- 206
+F M +R+ VS ++I G+ G AV F+ M E D +++A+++ R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 207 -----------------------NGELDMAAGILLECGDGDEGK--------HDLVQAYN 235
N +DM A +CG E + D++ ++N
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYA----KCGSMQEAELVFSEMRVKDII-SWN 467
Query: 236 TLIAGYGQSGKVEEARRLFDRI-------PNDQG---------------DGKE------- 266
T+I GY ++ EA LF+ + P+++ G+E
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
+G R+V NS++ Y K G ++ A LFD + +D +W MI+GY +EA
Sbjct: 528 NGYFSDRHVA--NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 327 KLFKEMPS----------------------------------------PDALSWNSIISG 346
LF +M P + I+
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 347 FAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQM-QLEGEKPDRH 404
A+ GDL A F E MP + W +L+ G + D K A ++ ++ +LE E +
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 705
Query: 405 TL 406
L
Sbjct: 706 VL 707
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 195/627 (31%), Positives = 319/627 (50%), Gaps = 76/627 (12%)
Query: 65 RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLF 124
RN + +I G++ R +P + +N I+ Y S + R++F
Sbjct: 19 RNQSRYVKMIHGNIIR-----------ALPYPETFLYNNIVHAYALMKSSTY---ARRVF 64
Query: 125 DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
D +P+ + SWN ++ Y+K G + + F+ +P+R+ V+ N +I G+ L+G V +AV
Sbjct: 65 DRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVK 124
Query: 185 FFKRMPECDSASLS--ALISGL---VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
+ M SA+L+ L++ L NG + + I + + LV + L+
Sbjct: 125 AYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS--PLLY 182
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
Y G + +A+++F G +D RN V +NS+M + G I A +LF
Sbjct: 183 MYANVGCISDAKKVFY--------GLDD-----RNTVMYNSLMGGLLACGMIEDALQLFR 229
Query: 300 SMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP----DALSWNSIISGFAQIGD--- 352
M E+D+ +W MI G Q +EA + F+EM D + S++ +G
Sbjct: 230 GM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINE 288
Query: 353 --------------------------------LKVAKDFFERMPQKNLISWNSLIAGYDK 380
L AK F+RM QKN++SW +++ GY +
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPI 439
+ A+++F MQ G PD +TL +S C + L G Q H + +T +I + +
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 440 NNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK 499
+NSL+T+Y +CG I ++ +FNEM +D ++W AM+ YA G AV+ ++LF +M +
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 500 IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEA 559
+ P +T V++AC+ AGLVE+G+R F M ++YGI P + H++ +D+ R G+L+EA
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 560 MDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANL 619
M IN MP PD W LL +CR GN+E+ + AA++LI L+P Y LL ++YA+
Sbjct: 528 MRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASK 587
Query: 620 ELWDDAERVRVLMEEKNVKKQTGYSWV 646
WD ++R M EKNVKK+ G SW+
Sbjct: 588 GKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 239/536 (44%), Gaps = 80/536 (14%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
L WN + + G +SE + F+ + R+ VTWN LI G+ + A + ++ M
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-M 130
Query: 96 RDIVSWNL----IISGYFSCCGSKFVEEGRKLFDEMPERDCVSW----NTVISGYAKNGR 147
RD S NL +++ + V G+++ ++ + S+ + ++ YA G
Sbjct: 131 RDF-SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRN 207
+ A K+F + +RN V N+++ G L G ++ A+ F+ M E DS S +A+I GL +N
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQN 248
Query: 208 GELDMA-------------------AGILLECGD---GDEGK-----------HDLVQAY 234
G A +L CG +EGK D +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
+ LI Y + + A+ +FDR+ ++NVVSW +M++ Y + G A
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMK-------------QKNVVSWTAMVVGYGQTGRAEEA 355
Query: 295 RELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSW----NSIISG 346
++F M + D IS +S +EE S+ + + + + NS+++
Sbjct: 356 VKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+ + GD+ + F M ++ +SW ++++ Y + I+LF +M G KPD TL
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 407 SSVLSVCT--GLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNE 462
+ V+S C+ GLV+ G++ +L+T ++P + + +I ++SR G + EA N
Sbjct: 476 TGVISACSRAGLVE--KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI-----HPTYITFISVLNA 513
M F D I W ++ + G LE+ K I HP T +S + A
Sbjct: 534 MPFPPDAIGWTTLLSACRNKG----NLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 322/617 (52%), Gaps = 99/617 (16%)
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
+ RKLFDEMP R SWNTV+S Y+K G MD + FD +P+R++VS +I G+
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 176 NGDVDSAV----GFFKRMPECDSASLSALISGL--------------------------V 205
G A+ K E +L+ +++ + V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 206 RNGELDMAAGILLECGDGDEGKHDL-------VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
N L+M A +CGD K + ++N +IA + Q G+++ A F+++
Sbjct: 184 SNSLLNMYA----KCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDT------------ 306
R++V+WNSM+ + + G + A ++F M RD+
Sbjct: 240 E-------------RDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSLLSPDRFTLASV 285
Query: 307 ---CA--------------------------WNTMISGYVQISDMEEASKLFKEMPSPDA 337
CA N +IS Y + +E A +L ++ + D
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 338 L--SWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
+ +++ G+ ++GD+ AK+ F + +++++W ++I GY+++ Y AI LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 396 LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIG 454
G++P+ +TL+++LSV + L L GKQ+H K+ I + ++N+LITMY++ G I
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
A F+ ++ +D ++W +MI A HG A +ALELF+ M + P +IT++ V +AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAV 574
HAGLV +GR+ F+ M + I P + H+A VD+ GR G LQEA + I MP++PD
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 575 WGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEE 634
WG+LL +CRVH N++L +VAA+ L+ LEPE+SG Y L N+Y+ W++A ++R M++
Sbjct: 586 WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 635 KNVKKQTGYSWVDSSNR 651
VKK+ G+SW++ ++
Sbjct: 646 GRVKKEQGFSWIEVKHK 662
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 219/492 (44%), Gaps = 81/492 (16%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA 195
N +++ Y+K G A KLFD MP R A S N V++ + GD+DS FF ++P+ DS
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 196 SLSALISGLVRNGELDMAAGILLECGDG-DEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
S + +I G G+ A ++ GD EG ++A + +E +++
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVM---GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVH 169
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
I R NV NS++ Y K GD + A+ +FD M RD +WN MI+
Sbjct: 170 SFIVK---------LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 315 GYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIG-DLKVAKDFFERMPQKNLISWNS 373
++Q+ M+ A F++M D ++WNS+ISGF Q G DL+ A D F +M + +L+S
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR-ALDIFSKMLRDSLLS--- 276
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKT 432
PDR TL+SVLS C L L +GKQ+H +VT
Sbjct: 277 ---------------------------PDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 433 VIPDLPINNSLITMYSRCGAI---------------------------------GEACTV 459
+ N+LI+MYSRCG + +A +
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F +K +DV+ W AMI GY HG +A+ LF+ M P T ++L+ +
Sbjct: 370 FVSLK-DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS 428
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ G++ S + I V + + + + G + A + + + D W +++
Sbjct: 429 LSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 580 GSCRVHGNVELA 591
+ HG+ E A
Sbjct: 488 IALAQHGHAEEA 499
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/549 (26%), Positives = 242/549 (44%), Gaps = 127/549 (23%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+TG AR FD M R +WNT++S + KR ++ + FD++PQRD VSW +I G
Sbjct: 61 KTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 108 Y--------------------------------FSCCGSKFVEEGRKLFD---EMPERDC 132
Y S ++ +E G+K+ ++ R
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 133 VSW-NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE 191
VS N++++ YAK G A +FD M R+ S NA+I + G +D A+ F++M E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 192 CDSASLSALISGLVRNG----ELDM----------------AAGILLECGDGDE---GK- 227
D + +++ISG + G LD+ A +L C + ++ GK
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 228 ---HDLVQAY-------NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
H + + N LI+ Y + G VE ARRL ++ G +D + +
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ------RGTKDLK-----IEG 349
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----- 332
+ +++ Y+K+GD+ A+ +F S+ +RD AW MI GY Q EA LF+ M
Sbjct: 350 FTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Query: 333 -PSPDALSW---------------------------------NSIISGFAQIGDLKVAKD 358
P+ L+ N++I+ +A+ G++ A
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASR 469
Query: 359 FFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--G 415
F+ + +++ +SW S+I ++ + A+ELF M +EG +PD T V S CT G
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 416 LVDLYLGKQMHQLV--TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
LV+ G+Q ++ +IP L ++ ++ R G + EA +M DV+TW
Sbjct: 530 LVN--QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 474 AMIGGYASH 482
+++ H
Sbjct: 588 SLLSACRVH 596
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 197/467 (42%), Gaps = 79/467 (16%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS 114
A+ FD M R+ +WN +I+ H++ ++ A F++M +RDIV+WN +ISG F+ G
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISG-FNQRGY 258
Query: 115 KFVEE---GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVIT 171
+ L D + D + +V+S A + + + S+ V T
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACAN----------LEKLCIGKQIHSHIVTT 308
Query: 172 GFLLNGDV-DSAVGFFKRMPECDSA---------------SLSALISGLVRNGELDMAAG 215
GF ++G V ++ + + R ++A +AL+ G ++ G+++ A
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI------PND--------- 260
I + D D V A+ +I GY Q G EA LF + PN
Sbjct: 369 IFVSLKDRD------VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 261 -------------QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM-GERDT 306
G + G + +V N+++ Y K G+I SA FD + ERDT
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVS--NALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 307 CAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFER 362
+W +MI Q EEA +LF+ M PD +++ + S G + + +F+
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 363 MPQKNLI-----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
M + I + ++ + + + A E +M +E PD T S+LS C
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE---PDVVTWGSLLSACRVHK 597
Query: 418 DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK 464
++ LGK + + + ++L +YS CG EA + MK
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 192/437 (43%), Gaps = 77/437 (17%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM-- 93
+ WN I+ ++ G++ A F+ M R+ VTWN++ISG +R +A +F +M
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 94 -----PQR-------------------------------DI--VSWNLIISGYFSCCGSK 115
P R DI + N +IS Y C G
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG-- 329
Query: 116 FVEEGRKLFDEMPERDCV--SWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGF 173
VE R+L ++ +D + ++ GY K G M+QA +F ++ +R+ V+ A+I G+
Sbjct: 330 -VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGY 388
Query: 174 LLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
+G A+ F+ M +S +L+A++S V + ++ G + G+
Sbjct: 389 EQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS--VASSLASLSHGKQIHGSAVKSGEIY 446
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
V N LI Y ++G + A R FD I R R+ VSW SM++ + G
Sbjct: 447 SVSVSNALITMYAKAGNITSASRAFDLI------------RCERDTVSWTSMIIALAQHG 494
Query: 290 DIVSARELFDSM---GER-DTCAWNTMISGYVQISDMEEASKLFKEMPSPDAL-----SW 340
A ELF++M G R D + + S + + + F M D + +
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 341 NSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAG--YDKNEDYKGAIELFSQMQLE 397
++ F + G L+ A++F E+MP + ++++W SL++ KN D G + + LE
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL-GKVAAERLLLLE 613
Query: 398 GEKPDRHT-LSSVLSVC 413
E ++ L+++ S C
Sbjct: 614 PENSGAYSALANLYSAC 630
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 249/422 (59%), Gaps = 15/422 (3%)
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
+YN++I GY + G + AR LFD +P + +N++SWNSM+ Y + D V
Sbjct: 189 SYNSMIDGYVKCGLIVSARELFDLMPMEM-----------KNLISWNSMISGYAQTSDGV 237
Query: 293 S-ARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIG 351
A +LF M E+D +WN+MI GYV+ +E+A LF MP D ++W ++I G+A++G
Sbjct: 238 DIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLG 297
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK-PDRHTLSSVL 410
+ AK F++MP ++++++NS++AGY +N+ + A+E+FS M+ E PD TL VL
Sbjct: 298 FVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVL 357
Query: 411 SVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDV 469
L L MH +V K + +LI MYS+CG+I A VF ++ K +
Sbjct: 358 PAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSI 416
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
WNAMIGG A HGL A ++ Q++RL + P ITF+ VLNAC+H+GLV+EG F
Sbjct: 417 DHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFEL 476
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
M + IEPR++H+ VDIL R G ++ A +LI MPV+P+ +W L +C H E
Sbjct: 477 MRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFE 536
Query: 590 LAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSS 649
++ A+ LI + YVLL NMYA+ +W D RVR +M+E+ ++K G SW++
Sbjct: 537 TGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELD 596
Query: 650 NR 651
R
Sbjct: 597 GR 598
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 203/430 (47%), Gaps = 40/430 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ--RD 97
N I ++ G L +R FD M R++V++N++I G+VK I AR+LFD MP ++
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 98 IVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDA 157
++SWN +ISGY S V+ KLF +MPE+D +SWN++I GY K+GR++ A LFD
Sbjct: 220 LISWNSMISGYAQT--SDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDV 277
Query: 158 MPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGIL 217
MP R+ V+ +I G+ G V A F +MP D + +++++G V+N + M A
Sbjct: 278 MPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN-KYHMEA--- 333
Query: 218 LECGDGDEGKHDLVQAYNTLI---AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
LE E + L+ TL+ Q G++ +A + I Q F
Sbjct: 334 LEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ---------FYLG 384
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP- 333
+++ Y K G I A +F+ + + WN MI G E A + ++
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 334 ---SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-----WNSLIAGYDKNEDYK 385
PD +++ +++ + G +K FE M +K+ I + ++ ++ +
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNS--- 442
A L +M +E P+ + L+ C+ + G +LV K +I N S
Sbjct: 505 LAKNLIEEMPVE---PNDVIWRTFLTACSHHKEFETG----ELVAKHLILQAGYNPSSYV 557
Query: 443 -LITMYSRCG 451
L MY+ G
Sbjct: 558 LLSNMYASFG 567
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 46/271 (16%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
L WN I ++ GR+ +A+ FD M R+ VTW T+I G+ K + A+ LFD+MP
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPH 311
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER-----DCVSWNTVISGYAKNGRMDQ 150
RD+V++N +++GY +K+ E ++F +M + D + V+ A+ GR+ +
Sbjct: 312 RDVVAYNSMMAGYVQ---NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 151 ALKLFDAMPERNAVSSN----AVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
A+ + + E+ A+I + G + A+ F+ + +A+I GL
Sbjct: 369 AIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 428
Query: 207 NG----ELDMA---------------AGILLEC---GDGDEG---------KHDL---VQ 232
+G DM G+L C G EG KH + +Q
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
Y ++ +SG +E A+ L + +P + D
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVEPND 519
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 219/721 (30%), Positives = 353/721 (48%), Gaps = 116/721 (16%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSM----KHRNTVTWNTLISGHVKR 80
F++ + SS+ WN IS +R G L++A F+ M + T+ L+ V
Sbjct: 93 FYRLDLRRSSI-RPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 81 REIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGR-----KLFDEMPERDCVSW 135
+ L D + + + S ++E G+ KLFD + ++DCV W
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIK----AYLEYGKIDVPSKLFDRVLQKDCVIW 207
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA 195
N +++GYAK G +D +K F M + +S NAV +L+ C S
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVM-RMDQISPNAVTFDCVLS--------------VCASK 252
Query: 196 SLSAL---ISGLVRNGELDMAAGI---LL----ECGDGDEG--------KHDLVQAYNTL 237
L L + GLV +D I LL +CG D+ + D V +N +
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV-TWNCM 311
Query: 238 IAGYGQSGKVEEARRLF----------------DRIPN-DQGDGKEDGRRFR----RNVV 276
I+GY QSG +EE+ F +P+ + + E ++ R+ +
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI 371
Query: 277 SWN-----SMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQ----ISDMEEASK 327
S + +++ Y K + A+ +F D + MISGY+ I +E
Sbjct: 372 SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 328 LFKEMPSPDALSWNSI-----------------------------------ISGFAQIGD 352
L K SP+ ++ SI I +A+ G
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ +A + FER+ +++++SWNS+I ++++ AI++F QM + G D ++S+ LS
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSA 551
Query: 413 CTGLVDLYLGKQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT 471
C L GK +H + K ++ D+ ++LI MY++CG + A VF MK K++++
Sbjct: 552 CANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVS 610
Query: 472 WNAMIGGYASHGLAVDALELFKQM-KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
WN++I +HG D+L LF +M ++ I P ITF+ ++++C H G V+EG R F SM
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSM 670
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVEL 590
DYGI+P+ EH+A VD+ GR G+L EA + + SMP PD VWG LLG+CR+H NVEL
Sbjct: 671 TEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVEL 730
Query: 591 AQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSN 650
A+VA+ L+ L+P +SG YVL+ N +AN W+ +VR LM+E+ V+K GYSW++ +
Sbjct: 731 AEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINK 790
Query: 651 R 651
R
Sbjct: 791 R 791
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 156/704 (22%), Positives = 280/704 (39%), Gaps = 153/704 (21%)
Query: 29 NDNESSLLHQWNKKI-SHLIRT----GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREI 83
+D SSL N+ + S LI+ G++ FD + ++ V WN +++G+ K +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 84 AKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFV-------------------------- 117
+ F M I + S C SK +
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 118 ----------EEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN 167
++ KLF M D V+WN +ISGY ++G M+++L F M +
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 168 AVITGFLLNGDVDSAVGFFKRMPECD---------SASL-----SALISGLVRNGELDMA 213
+ L +V F+ + C S SL SALI + + MA
Sbjct: 341 ITFSSLL------PSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI------PND------- 260
I +C D V + +I+GY +G ++ +F + PN+
Sbjct: 395 QNIFSQCNSVD------VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 261 ---------------QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERD 305
G + G R N+ +++ Y K G + A E+F+ + +RD
Sbjct: 449 PVIGILLALKLGRELHGFIIKKGFDNRCNIGC--AVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEM----------------------PS--------- 334
+WN+MI+ Q + A +F++M PS
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 335 --------PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG 386
D S +++I +A+ G+LK A + F+ M +KN++SWNS+IA + K
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 387 AIELFSQM-QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSL 443
++ LF +M + G +PD+ T ++S C + D+ G + + +T+ + P +
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT 503
+ ++ R G + EA M F D W ++G H V+ E+ K + + P+
Sbjct: 687 VDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK-NVELAEV-ASSKLMDLDPS 744
Query: 504 YITFISVLNACAHAGLVE-EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
+ VL + AHA E E + S++ + ++ ++ + S+++I ++ L + D
Sbjct: 745 NSGYY-VLISNAHANAREWESVTKVRSLMKEREVQ-KIPGY-SWIEI-NKRTHLFVSGD- 799
Query: 563 INSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
+N ++ +LLG R+ G + Q + L PESS
Sbjct: 800 VNHPESSHIYSLLNSLLGELRLEGYI------PQPYLPLHPESS 837
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 17/280 (6%)
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMP--QKNLISWNSLIAGYDKNEDYKGAIELF 391
S D+ + I+ +A G F R+ + ++ WNS+I+ + +N A+ +
Sbjct: 67 SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFY 126
Query: 392 SQMQLEGEKPDRHTLSSVLSVCTGLVDL----YLGKQMHQLVTKTVIPDLPINNSLITMY 447
+M G PD T ++ C L + +L + L + + +SLI Y
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDC---NEFVASSLIKAY 183
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
G I +F+ + KD + WN M+ GYA G ++ F M+ +I P +TF
Sbjct: 184 LEYGKIDVPSKLFDRV-LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTF 242
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
VL+ CA L++ G Q + ++ G++ S + + + G+ +A L M
Sbjct: 243 DCVLSVCASKLLIDLG-VQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG 607
+ D W +C + G V+ + E SSG
Sbjct: 302 -RADTVTW-----NCMISGYVQSGLMEESLTFFYEMISSG 335
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 384 YKGAIELFSQMQ-LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ-LVTKTVIPDLPINN 441
YK ++ L + + LE P R LS +L C+ L GKQ+H L+ ++ D +
Sbjct: 17 YKKSLPLRNSSRFLEETIPRR--LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVI-TWNAMIGGYASHGLAVDALELFKQMKRLKI 500
++ MY+ CG+ + +F + + I WN++I + +GL AL + +M +
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 501 HPTYITFISVLNACA 515
P TF ++ AC
Sbjct: 135 SPDVSTFPCLVKACV 149
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 302/532 (56%), Gaps = 50/532 (9%)
Query: 122 KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
++F+++ E + N++I +A+N + QA +F M +R + ++ FLL
Sbjct: 72 RVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEM-QRFGLFADNFTYPFLLKA---- 126
Query: 182 AVGFFKRMPECDSASLSALISGLVRNGE-LDMAAGILLECGDGDEGKHDLVQAYNTLIAG 240
C S ++ + + E L +++ I + N LI
Sbjct: 127 ----------CSGQSWLPVVKMMHNHIEKLGLSSDIYVP---------------NALIDC 161
Query: 241 YGQSGK--VEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
Y + G V +A +LF+++ R+ VSWNSM+ VK G++ AR LF
Sbjct: 162 YSRCGGLGVRDAMKLFEKMS-------------ERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 299 DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKD 358
D M +RD +WNTM+ GY + +M +A +LF++MP + +SW++++ G+++ GD+++A+
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 359 FFERMP--QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
F++MP KN+++W +IAGY + K A L QM G K D + S+L+ CT
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 417 VDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAM 475
L LG ++H ++ ++ + + + N+L+ MY++CG + +A VFN++ KD+++WN M
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTM 387
Query: 476 IGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYG 535
+ G HG +A+ELF +M+R I P +TFI+VL +C HAGL++EG F SM Y
Sbjct: 388 LHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD 447
Query: 536 IEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAA 595
+ P+VEH+ VD+LGR G+L+EA+ ++ +MP++P+ +WGALLG+CR+H V++A+
Sbjct: 448 LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVL 507
Query: 596 QALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
L+ L+P G Y LL N+YA E W+ +R M+ V+K +G S V+
Sbjct: 508 DNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 237/554 (42%), Gaps = 106/554 (19%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
LH K IS L + + A F+ ++ N N+LI H + + +A +F EM Q
Sbjct: 51 LHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEM-Q 109
Query: 96 R----------------------------------------DIVSWNLIISGYFSCCGSK 115
R DI N +I Y S CG
Sbjct: 110 RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCY-SRCGGL 168
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
V + KLF++M ERD VSWN+++ G K G + A +LFD MP+R+ +S N ++ G+
Sbjct: 169 GVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYAR 228
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
++ A F++MPE ++ S S ++ G + G+++MA + D V +
Sbjct: 229 CREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF----DKMPLPAKNVVTWT 284
Query: 236 TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
+IAGY + G ++EA RL D++ G +F V S++ + G ++S
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQM-------VASGLKFDAAAVI--SILAACTESG-LLSLG 334
Query: 296 ELFDSMGER-----DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQI 350
S+ +R + N ++ Y + ++++A +F ++P D +SWN+++ G
Sbjct: 335 MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLG-- 392
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
+ G+ K AIELFS+M+ EG +PD+ T +VL
Sbjct: 393 ------------------------VHGHGKE-----AIELFSRMRREGIRPDKVTFIAVL 423
Query: 411 SVC--TGLVD-----LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM 463
C GL+D Y ++++ LV P + L+ + R G + EA V M
Sbjct: 424 CSCNHAGLIDEGIDYFYSMEKVYDLV-----PQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 464 KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
+V+ W A++G H A E+ + +K+ P S+L+ A EG
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNL--VKLDPCDPGNYSLLSNIYAAAEDWEG 536
Query: 524 RRQFNSMINDYGIE 537
S + G+E
Sbjct: 537 VADIRSKMKSMGVE 550
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 194/395 (49%), Gaps = 37/395 (9%)
Query: 33 SSLLHQWNKKISHLIRTGRLS--EARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLF 90
SS ++ N I R G L +A F+ M R+TV+WN+++ G VK E+ AR+LF
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 91 DEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQ 150
DEMPQRD++SWN ++ GY C + + + +LF++MPER+ VSW+T++ GY+K G M+
Sbjct: 209 DEMPQRDLISWNTMLDGYARC---REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 151 ALKLFDAM--PERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGL 204
A +FD M P +N V+ +I G+ G + A +M + D+A++ ++++
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
+G L + I + G + V N L+ Y + G +++A +F+ IP
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYV--LNALLDMYAKCGNLKKAFDVFNDIP------ 377
Query: 265 KEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GER-DTCAWNTMISGYVQIS 320
++++VSWN+M+ G A ELF M G R D + ++
Sbjct: 378 -------KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Query: 321 DMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSL 374
++E F M P + ++ ++G LK A + MP + N++ W +L
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
Query: 375 IAGYDKNEDYKGAIELFSQM-QLEGEKPDRHTLSS 408
+ + + A E+ + +L+ P ++L S
Sbjct: 491 LGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLS 525
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 42/385 (10%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN + L++ G L +AR FD M R+ ++WNT++ G+ + RE++KA +LF++MP+R+
Sbjct: 188 WNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNT 247
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEM--PERDCVSWNTVISGYAKNGRMDQALKLFD 156
VSW+ ++ GY S G +E R +FD+M P ++ V+W +I+GYA+ G + +A +L D
Sbjct: 248 VSWSTMVMGY-SKAGD--MEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGI 216
M V +G L D + + E SL I +++ L A +
Sbjct: 305 QM----------VASG--LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYV 352
Query: 217 L-------LECGD--------GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ 261
L +CG+ D K DLV ++NT++ G G G +EA LF R+ +
Sbjct: 353 LNALLDMYAKCGNLKKAFDVFNDIPKKDLV-SWNTMLHGLGVHGHGKEAIELFSRMRRE- 410
Query: 262 GDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD 321
+ D F + S N + + S +++D + + + + ++ ++
Sbjct: 411 -GIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEH--YGCLVDLLGRVGR 467
Query: 322 MEEASKLFKEMP-SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI---SWNSLIAG 377
++EA K+ + MP P+ + W +++ ++ +AK+ + + + + +++ L
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI 527
Query: 378 YDKNEDYKGAIELFSQMQLEG-EKP 401
Y ED++G ++ S+M+ G EKP
Sbjct: 528 YAAAEDWEGVADIRSKMKSMGVEKP 552
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 14/242 (5%)
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
+IS + +A F ++ + N+ NSLI + +N A +FS+MQ G D
Sbjct: 57 LISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFAD 116
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIG--EACTV 459
T +L C+G L + K MH + K + D+ + N+LI YSRCG +G +A +
Sbjct: 117 NFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F +M +D ++WN+M+GG G DA LF +M + + I++ ++L+ A
Sbjct: 177 FEKMS-ERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCRE 231
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAV-WGAL 578
+ + F M E +++ V + G ++ A + + MP+ V W +
Sbjct: 232 MSKAFELFEKM-----PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 579 LG 580
+
Sbjct: 287 IA 288
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 341/692 (49%), Gaps = 106/692 (15%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLI--- 104
R GR EA+ F ++ HR + + I V + +LF + + +
Sbjct: 70 RDGRTQEAKRLFLNI-HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 105 ------ISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
+ Y GS F ++GRK+FDEM ER+ V+W T+ISGYA+N D+ L LF M
Sbjct: 129 SVGTSLVDTYMK--GSNF-KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM 185
Query: 159 ----PERNAVSSNAVITGFLLNG------DVDSAV---GFFKRMPECDSASLSALISGLV 205
+ N+ + A + G V + V G K +P +S L G V
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 206 RNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
R A IL D+ + V +N++I+GY +G EA +F + +
Sbjct: 246 RK------ARILF-----DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 266 ED----------------------------GRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
E G F +N+ + ++M+ Y K ++ A L
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDALRL 352
Query: 298 FDSMG-ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISG------ 346
F +G + +W MISG++Q EEA LF EM P+ +++ I++
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 347 -------------------------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKN 381
+ ++G ++ A F + K++++W++++AGY +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 382 EDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL-VDLYLGKQMHQLVTKTVI-PDLPI 439
+ + AI++F ++ G KP+ T SS+L+VC + GKQ H K+ + L +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 440 NNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK 499
+++L+TMY++ G I A VF + KD+++WN+MI GYA HG A+ AL++FK+MK+ K
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 591
Query: 500 IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEA 559
+ +TFI V AC HAGLVEEG + F+ M+ D I P EH + VD+ R GQL++A
Sbjct: 592 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
Query: 560 MDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANL 619
M +I +MP +W +L +CRVH EL ++AA+ +I+++PE S YVLL NMYA
Sbjct: 652 MKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAES 711
Query: 620 ELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
W + +VR LM E+NVKK+ GYSW++ N+
Sbjct: 712 GDWQERAKVRKLMNERNVKKEPGYSWIEVKNK 743
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 136/573 (23%), Positives = 253/573 (44%), Gaps = 68/573 (11%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIVSWN 102
+ + RL A FD R+ ++ +L+ G + +A++LF + + D ++
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 103 LIISGYFSCCGSKFVEEGRKLFDEMPE---RDCVSWNT-VISGYAKNGRMDQALKLFDAM 158
++ + C F GR+L + + D VS T ++ Y K K+FD M
Sbjct: 98 SVLKVSATLCDELF---GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAA 214
ERN V+ +I+G+ N D + F RM + +S + +A + L G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV--GGR 212
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
G+ + G + N+LI Y + G V +AR LFD+ ++
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE-------------VKS 259
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL-----F 329
VV+WNSM+ Y G + A +F SM YV++S+ AS +
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMR-----------LNYVRLSESSFASVIKLCANL 308
Query: 330 KEMPSPDALSWNSIISGFAQIGDLKVA---------------KDFFERMPQKNLISWNSL 374
KE+ + L + + GF +++ A + F E N++SW ++
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI 434
I+G+ +N+ + A++LFS+M+ +G +P+ T S +L+ + + ++H V KT
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNY 424
Query: 435 P-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFK 493
+ +L+ Y + G + EA VF+ + KD++ W+AM+ GYA G A+++F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 494 QMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQ 553
++ + I P TF S+LN CA +QF+ ++ + ++ + + ++
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 554 GQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
G ++ A ++ K D W +++ HG
Sbjct: 544 GNIESAEEVFKRQREK-DLVSWNSMISGYAQHG 575
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 203/441 (46%), Gaps = 60/441 (13%)
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
G S ++ A LFD+ P R+ S+ S++ + + G A+ LF
Sbjct: 36 GTVSSSRLYNAHNLFDKSPG-------------RDRESYISLLFGFSRDGRTQEAKRLFL 82
Query: 300 SMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIG 351
++ E D +++++ + D +L + D S++ + +
Sbjct: 83 NIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ K + F+ M ++N+++W +LI+GY +N + LF +MQ EG +P+ T ++ L
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 412 VCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
V G Q+H +V K + +P++NSLI +Y +CG + +A +F++ + K V+
Sbjct: 203 VLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVV 261
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACA-----------HAGL 519
TWN+MI GYA++GL ++AL +F M+ + + +F SV+ CA H +
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 520 VEEG--------------RRQFNSMIN------DYGIEPRVEHFASFVDILGRQGQLQEA 559
V+ G + +M++ + G V + + + + +EA
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 560 MDLINSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMY 616
+DL + M V+P++ + +L + V + ++V AQ + + SS L + Y
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPV---ISPSEVHAQVVKTNYERSSTVGTALLDAY 438
Query: 617 ANLELWDDAERVRVLMEEKNV 637
L ++A +V +++K++
Sbjct: 439 VKLGKVEEAAKVFSGIDDKDI 459
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 167/399 (41%), Gaps = 84/399 (21%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKR------------------- 80
N I+ ++ G + +AR FD + ++ VTWN++ISG+
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 81 ----------REIAKARQL-FDEMPQRDIVSWNLIIS---------GYFSCCGSKFVEEG 120
+ A ++L F E +V + + Y C + +
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA---MLDA 349
Query: 121 RKLFDEMP-ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLL 175
+LF E+ + VSW +ISG+ +N ++A+ LF M + N + + ++T +
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
+ K E S +AL+ V+ G+++ AA + D D + A++
Sbjct: 410 ISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD------IVAWS 463
Query: 236 TLIAGYGQSGKVEEARRLFDRI------PND----------------QGDGKE-----DG 268
++AGY Q+G+ E A ++F + PN+ G GK+
Sbjct: 464 AMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
R ++ ++++ Y K G+I SA E+F E+D +WN+MISGY Q +A +
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 329 FKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERM 363
FKEM D +++ + + G ++ + +F+ M
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIM 622
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDE 92
S+LL + KK G + A F + ++ V+WN++ISG+ + + KA +F E
Sbjct: 534 SALLTMYAKK-------GNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 93 MPQRDIVSWNLIISGYFSCCG-SKFVEEGRKLFDEMPERDCVSWNT------VISGYAKN 145
M +R + + G F+ C + VEEG K FD M RDC T ++ Y++
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV-RDCKIAPTKEHNSCMVDLYSRA 645
Query: 146 GRMDQALKLFDAMP 159
G++++A+K+ + MP
Sbjct: 646 GQLEKAMKVIENMP 659
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 333/625 (53%), Gaps = 38/625 (6%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
I ++ G + AR FD++ ++TVTW T+ISG VK + QLF ++ + ++V
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 103 LIISGYFSCCGS-KFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDA 157
I+S S C F+E G+++ + E D N +I Y K GR+ A KLF+
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 158 MPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMA 213
MP +N +S +++G+ N A+ F M + D + S++++ L
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
+ + G V N+LI Y + + +AR++FD
Sbjct: 370 TQVHAYTIKANLGNDSYVT--NSLIDMYAKCDCLTDARKVFDIFA-------------AA 414
Query: 274 NVVSWNSMMMCYVKVG---DIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEAS 326
+VV +N+M+ Y ++G ++ A +F M R + +++ ++ + +
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 327 K----LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+ +FK + D + +++I ++ LK ++ F+ M K+L+ WNS+ AGY +
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINN 441
+ + A+ LF ++QL E+PD T +++++ L + LG++ H QL+ + + + I N
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
+L+ MY++CG+ +A F+ +DV+ WN++I YA+HG AL++ ++M I
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIE 653
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P YITF+ VL+AC+HAGLVE+G +QF M+ +GIEP EH+ V +LGR G+L +A +
Sbjct: 654 PNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARE 712
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLEL 621
LI MP KP VW +LL C GNVELA+ AA+ I +P+ SG + +L N+YA+ +
Sbjct: 713 LIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
Query: 622 WDDAERVRVLMEEKNVKKQTGYSWV 646
W +A++VR M+ + V K+ G SW+
Sbjct: 773 WTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 143/627 (22%), Positives = 277/627 (44%), Gaps = 100/627 (15%)
Query: 51 RLSEARTFFDSMKHRNTVTW---------NTLISGHVKRREIAKARQLFDEMPQRDIVSW 101
R S+ + ++ H + W N LI+ + + + AR++F++MP+R++VSW
Sbjct: 54 RASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSW 113
Query: 102 NLIISGYFSCCGSKFVEEGRKLFDEM-------P-------------------------- 128
+ ++S +C EE +F E P
Sbjct: 114 STMVS---ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQL 170
Query: 129 ---------ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
+RD +I Y K+G +D A +FDA+PE++ V+ +I+G + G
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY----- 234
++ F ++ E + ++S + ++A +L +G + H + Y
Sbjct: 231 YVSLQLFYQLMEDNVVPDGYILSTV-------LSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 235 ----NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
N LI Y + G+V A +LF+ +PN +N++SW +++ Y +
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPN-------------KNIISWTTLLSGYKQNAL 330
Query: 291 IVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL----FKEMPSPDALSWNS 342
A ELF SM + D A +++++ + + +++ K D+ NS
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDK---NEDYKGAIELFSQMQLEGE 399
+I +A+ L A+ F+ +++ +N++I GY + + A+ +F M+
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACT 458
+P T S+L L L L KQ+H L+ K + D+ ++LI +YS C + ++
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
VF+EMK KD++ WN+M GY +AL LF +++ + P TF +++ A +
Sbjct: 511 VFDEMKV-KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
V+ G ++F+ + G+E + +D+ + G ++A +S + D W ++
Sbjct: 570 SVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-DVVCWNSV 627
Query: 579 LGSCRVHGNVELAQVAAQALIS--LEP 603
+ S HG + A + ++S +EP
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEP 654
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 218/536 (40%), Gaps = 95/536 (17%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----Q 95
N I ++ GR+ A F+ M ++N ++W TL+SG+ + +A +LF M +
Sbjct: 288 NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK 347
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQA 151
D+ + + I++ SC + G ++ + D N++I YAK + A
Sbjct: 348 PDMYACSSILT---SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNG---DVDSAVGFFKRM------PEC--------DS 194
K+FD + V NA+I G+ G ++ A+ F+ M P S
Sbjct: 405 RKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Query: 195 ASLSAL-----ISGLVRNGELDM---AAGILLECGDG-----------DEGKHDLVQAYN 235
ASL++L I GL+ L++ A L++ DE K + +N
Sbjct: 465 ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWN 524
Query: 236 TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
++ AGY Q + EEA LF + R R + ++ +M+ + + +
Sbjct: 525 SMFAGYVQQSENEEALNLFLELQLS---------RERPDEFTFANMVTAAGNLASVQLGQ 575
Query: 296 ELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIG 351
E + +R + N ++ Y + E+A K F S D + WNS+IS +A G
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHG 635
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ K A+++ +M EG +P+ T VLS
Sbjct: 636 -------------------------------EGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 412 VCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDV 469
C+ GLV+ L KQ ++ + P+ ++++ R G + +A + +M
Sbjct: 665 ACSHAGLVEDGL-KQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
I W +++ G A G V+ E +M L +F + N A G+ E ++
Sbjct: 724 IVWRSLLSGCAKAG-NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 302/596 (50%), Gaps = 57/596 (9%)
Query: 63 KHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI-VSWNLIISGYFSCCGSKFVEEGR 121
+ R + +S H + E+++A + + Q+ I + ++L+ S C +K +++G+
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGK 66
Query: 122 KLFDEMPERDCVSWNTVISG-----YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
+ + NT++S Y K G+ A K+FD M RN S N
Sbjct: 67 WIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNN-------- 118
Query: 177 GDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT 236
++SG V++G L A + + D V ++NT
Sbjct: 119 -----------------------MVSGYVKSGMLVRARVVFDSMPERD------VVSWNT 149
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
++ GY Q G + EA + + G +F N S+ ++ VK + R+
Sbjct: 150 MVIGYAQDGNLHEALWFYKEF-------RRSGIKF--NEFSFAGLLTACVKSRQLQLNRQ 200
Query: 297 LFDSM---GERDTCAWN-TMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGD 352
+ G + ++I Y + ME A + F EM D W ++ISG+A++GD
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
++ A+ F MP+KN +SW +LIAGY + A++LF +M G KP++ T SS L
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 413 CTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT 471
+ L GK++H + +T V P+ + +SLI MYS+ G++ + VF D +
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 472 WNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI 531
WN MI A HGL AL + M + ++ P T + +LNAC+H+GLVEEG R F SM
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMT 440
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+GI P EH+A +D+LGR G +E M I MP +PDK +W A+LG CR+HGN EL
Sbjct: 441 VQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELG 500
Query: 592 QVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ AA LI L+PESS PY+LL ++YA+ W+ E++R +M+++ V K+ SW++
Sbjct: 501 KKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIE 556
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 212/493 (43%), Gaps = 89/493 (18%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDE 92
+SLL Q S ++ G+ K NT+ N LI ++K + A ++FD+
Sbjct: 50 ASLLQQCGDTKS--LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 93 MPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQAL 152
M R++ SWN ++SGY S + R +FD MPERD VSWNT++ GYA++G + +AL
Sbjct: 108 MHLRNLYSWNNMVSGYVK---SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEAL 164
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
+ R+ + N LL V S +++ A L++G + N
Sbjct: 165 WFYKEF-RRSGIKFNEFSFAGLLTACVKS-----RQLQLNRQAHGQVLVAGFLSN----- 213
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
++L C ++I Y + G++E A+R FD +
Sbjct: 214 ---VVLSC---------------SIIDAYAKCGQMESAKRCFDEMT-------------V 242
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM 332
+++ W +++ Y K+GD+ +A +LF M E++ +W +I+GYV+ A LF++M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 333 PS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL-------------------- 368
+ P+ +++S + A I L+ K+ M + N+
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 369 ----------------ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ WN++I+ ++ A+ + M +P+R TL +L+
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNA 422
Query: 413 C--TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C +GLV+ L V ++PD LI + R G E EM F D
Sbjct: 423 CSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKH 482
Query: 471 TWNAMIGGYASHG 483
WNA++G HG
Sbjct: 483 IWNAILGVCRIHG 495
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 200/607 (32%), Positives = 331/607 (54%), Gaps = 56/607 (9%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
ISH+I G+ R+F +++ +N LI H+ R I +AR++F+++P + +
Sbjct: 17 ISHVIH-GKC--YRSFSVTVEFQNR---EVLICNHLLSRRIDEAREVFNQVPSPHVSLYT 70
Query: 103 LIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
+I+GY S + + LFDEMP RD VSWN++ISG + G M+ A+KLFD MPER+
Sbjct: 71 KMITGYTR---SNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGD 222
VS A++ G +G VD A F +MP D+A+ ++++ G ++ G++D A + +
Sbjct: 128 VVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQM-- 185
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
GK+ V ++ T+I G Q+ + EA LF +M+
Sbjct: 186 --PGKN--VISWTTMICGLDQNERSGEALDLF------------------------KNML 217
Query: 283 MCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM-EEASKLFKEMPSPDALSWN 341
C +K S F + CA +Q+ + + L++E S
Sbjct: 218 RCCIK-----STSRPFTCV--ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSA------ 264
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
S+I+ +A + ++ F+ + + W +L++GY N+ ++ A+ +FS M P
Sbjct: 265 SLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILP 324
Query: 402 DRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVF 460
++ T +S L+ C+ L L GK+MH + K + D + NSL+ MYS G + +A +VF
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV 520
++ F K +++WN++I G A HG A +F QM RL P ITF +L+AC+H G +
Sbjct: 385 IKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 521 EEGRRQFNSMINDYG-IEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
E+GR+ F M + I+ +++H+ VDILGR G+L+EA +LI M VKP++ VW ALL
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALL 503
Query: 580 GSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKK 639
+CR+H +V+ + AA A+ +L+ +SS YVLL N+YA+ W + ++RV M++ + K
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMK 563
Query: 640 QTGYSWV 646
+ G SWV
Sbjct: 564 KPGSSWV 570
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 224/473 (47%), Gaps = 41/473 (8%)
Query: 29 NDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQ 88
N S + + K I+ R+ RL +A FD M R+ V+WN++ISG V+ ++ A +
Sbjct: 59 NQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVK 118
Query: 89 LFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRM 148
LFDEMP+R +VSW +++G C S V++ +LF +MP +D +WN+++ GY + G++
Sbjct: 119 LFDEMPERSVVSWTAMVNG---CFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKV 175
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGL 204
D ALKLF MP +N +S +I G N A+ FK M C S + +I+
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 205 VRNGELDMAA---GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ 261
M G++++ G E + V A +LI Y ++ ++R++FD ++Q
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYE---EYVSA--SLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 262 GDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN--TMISGYVQI 319
V W +++ Y A +F M R++ N T SG
Sbjct: 291 -------------VAVWTALLSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNSC 336
Query: 320 SDM-------EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWN 372
S + E K DA NS++ ++ G++ A F ++ +K+++SWN
Sbjct: 337 SALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWN 396
Query: 373 SLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT 432
S+I G ++ K A +F QM ++PD T + +LS C+ L G+++ ++
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 433 VIP-DLPINN--SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
+ D I + ++ + RCG + EA + M + + W A++ H
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMH 509
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 223/342 (65%), Gaps = 2/342 (0%)
Query: 310 NTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
N +I Y++ D+ +A K+F EM D +SWNS++SG+A++G +K AK F M K ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
SW ++I+GY Y A++ F +MQL G +PD +L SVL C L L LGK +H
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 430 TKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+ + + N+LI MYS+CG I +A +F +M+ KDVI+W+ MI GYA HG A A
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME-GKDVISWSTMISGYAYHGNAHGA 326
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
+E F +M+R K+ P ITF+ +L+AC+H G+ +EG R F+ M DY IEP++EH+ +D
Sbjct: 327 IETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGP 608
+L R G+L+ A+++ +MP+KPD +WG+LL SCR GN+++A VA L+ LEPE G
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGN 446
Query: 609 YVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSN 650
YVLL N+YA+L W+D R+R ++ +N+KK G S ++ +N
Sbjct: 447 YVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNN 488
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 36/276 (13%)
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG-EKPDRHTLS 407
+I D+ A F ++ N+ +NS+I Y N Y I ++ Q+ + E PDR T
Sbjct: 54 KIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFP 113
Query: 408 SVLSVCTGLVDLYLGKQMH----------QLVTKTVIPDLPIN----------------- 440
+ C L YLGKQ+H +VT+ + D+ +
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER 173
Query: 441 -----NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
NSL++ Y+R G + +A +F+ M K +++W AMI GY G V+A++ F++M
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLM-LDKTIVSWTAMISGYTGIGCYVEAMDFFREM 232
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
+ I P I+ ISVL +CA G +E G + + G + + +++ + G
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 556 LQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+ +A+ L M K D W ++ HGN A
Sbjct: 292 ISQAIQLFGQMEGK-DVISWSTMISGYAYHGNAHGA 326
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 144/301 (47%), Gaps = 40/301 (13%)
Query: 94 PQRDIVSWNLIISGYFSCCGSKF--VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
P+ +V+ N +I Y KF + + K+FDEM ERD +SWN+++SGYA+ G+M +A
Sbjct: 140 PRFHVVTENALIDMYM-----KFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 194
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRN 207
LF M ++ VS A+I+G+ G A+ FF+ M E D SL +++ +
Sbjct: 195 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 208 GELDMAAGILLECGDGDEGKHDLVQ--AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
G L++ I L E + L Q N LI Y + G + +A +LF G+
Sbjct: 255 GSLELGKWIHLYA----ERRGFLKQTGVCNALIEMYSKCGVISQAIQLF---------GQ 301
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISD 321
+G ++V+SW++M+ Y G+ A E F+ M + + + ++S +
Sbjct: 302 MEG----KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 322 MEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLI 375
+E + F M P + +I A+ G L+ A + + MP K + W SL+
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Query: 376 A 376
+
Sbjct: 418 S 418
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 42/310 (13%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD 125
+ VT N LI ++K ++ A ++FDEM +RD++SWN ++SGY K + + LF
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK---KAKGLFH 199
Query: 126 EMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDS 181
M ++ VSW +ISGY G +A+ F M E + +S +V+ G ++
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 182 AV---------GFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQ 232
GF K+ C+ ALI + G + A + + EGK V
Sbjct: 260 GKWIHLYAERRGFLKQTGVCN-----ALIEMYSKCGVISQAIQLFGQM----EGKD--VI 308
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
+++T+I+GY G A F+ + + + N +++ ++ VG
Sbjct: 309 SWSTMISGYAYHGNAHGAIETFNEMQR---------AKVKPNGITFLGLLSACSHVGMWQ 359
Query: 293 SARELFDSMG-----ERDTCAWNTMISGYVQISDMEEASKLFKEMP-SPDALSWNSIISG 346
FD M E + +I + +E A ++ K MP PD+ W S++S
Sbjct: 360 EGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 347 FAQIGDLKVA 356
G+L VA
Sbjct: 420 CRTPGNLDVA 429
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 130/330 (39%), Gaps = 33/330 (10%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN +S R G++ +A+ F M + V+W +ISG+ +A F EM I
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 99 VSWNL-IISGYFSCCGSKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALK 153
+ +IS SC +E G+ + R + N +I Y+K G + QA++
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGE 209
LF M ++ +S + +I+G+ +G+ A+ F M + + L+S G
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
+ D ++ Y LI ++GK+E A + +P K D +
Sbjct: 358 WQEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM-----KPDSK 411
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE---RDTCAWNTMISGYVQISDMEEAS 326
W S++ G++ A D + E D + + + Y + E+ S
Sbjct: 412 -------IWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 464
Query: 327 KL--------FKEMPSPDALSWNSIISGFA 348
+L K+ P + N+I+ F
Sbjct: 465 RLRKMIRNENMKKTPGGSLIEVNNIVQEFV 494
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 243/378 (64%), Gaps = 8/378 (2%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDAL 338
N++++ + GD+ A ELFD + AW++M SGY + ++EA +LF EMP D +
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 339 SWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
+WN +I+G + ++ A++ F+R +K++++WN++I+GY K A+ +F +M+ G
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 399 EKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT------VIPDLPINNSLITMYSRCGA 452
E PD T+ S+LS C L DL GK++H + +T + PI N+LI MY++CG+
Sbjct: 271 EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGS 330
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
I A VF +K +D+ TWN +I G A H A ++E+F++M+RLK+ P +TFI V+
Sbjct: 331 IDRAIEVFRGVK-DRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDK 572
AC+H+G V+EGR+ F+ M + Y IEP ++H+ VD+LGR GQL+EA + SM ++P+
Sbjct: 389 ACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNA 448
Query: 573 AVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLM 632
VW LLG+C+++GNVEL + A + L+S+ + SG YVLL N+YA+ WD ++VR +
Sbjct: 449 IVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMF 508
Query: 633 EEKNVKKQTGYSWVDSSN 650
++ VKK TG S ++ +
Sbjct: 509 DDTRVKKPTGVSLIEEDD 526
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 188/441 (42%), Gaps = 88/441 (19%)
Query: 103 LIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
LI S S G+ ++ KLFDE+P+ D N V+ G A++ + ++ + L+ M +R
Sbjct: 50 LIYSASLSVPGA--LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRG 107
Query: 163 AVSSNAVIT--------------GFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG 208
T GF +G V GF + +ALI G
Sbjct: 108 VSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH-GFV-----LNEYVKNALILFHANCG 161
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
+L GI E D H + A++++ +GY + GK++EA RLFD +P
Sbjct: 162 DL----GIASELFDDSAKAHKV--AWSSMTSGYAKRGKIDEAMRLFDEMP---------- 205
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
++ V+WN M+ +K ++ SARELFD E+D WN MISGYV +EA +
Sbjct: 206 ---YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGI 262
Query: 329 FKEM----PSPDALS----------------------------------------WNSII 344
FKEM PD ++ WN++I
Sbjct: 263 FKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALI 322
Query: 345 SGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRH 404
+A+ G + A + F + ++L +WN+LI G + +G+IE+F +MQ P+
Sbjct: 323 DMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRLKVWPNEV 381
Query: 405 TLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNE 462
T V+ C+ + G++ L+ + P++ ++ M R G + EA
Sbjct: 382 TFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVES 441
Query: 463 MKFYKDVITWNAMIGGYASHG 483
MK + I W ++G +G
Sbjct: 442 MKIEPNAIVWRTLLGACKIYG 462
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 177/423 (41%), Gaps = 55/423 (13%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
G L A FD + + N ++ G + + K L+ EM +R + +
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 110 SCCGS------------KFVEEG------------------------RKLFDEMPERDCV 133
C K V G +LFD+ + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 134 SWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECD 193
+W+++ SGYAK G++D+A++LFD MP ++ V+ N +ITG L ++DSA F R E D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 194 SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRL 253
+ +A+ISG V G A GI E D G+H V +L++ G +E +RL
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDA--GEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 254 FDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMI 313
I WN+++ Y K G I A E+F + +RD WNT+I
Sbjct: 298 HIYILETASVSSS----IYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI 353
Query: 314 SGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMP----- 364
G + + E + ++F+EM P+ +++ +I + G + + +F M
Sbjct: 354 VG-LALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI 412
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
+ N+ + ++ + + A M++E P+ ++L C ++ LGK
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE---PNAIVWRTLLGACKIYGNVELGKY 469
Query: 425 MHQ 427
++
Sbjct: 470 ANE 472
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 165/372 (44%), Gaps = 53/372 (14%)
Query: 19 SRGLASFHKTNDNESSLLHQWNKKISHLIRT--GRLSEARTFFDSMKHRNTVTWNTLISG 76
S G A FH +L+++ K L G L A FD + V W+++ SG
Sbjct: 129 SNGFA-FHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSG 187
Query: 77 HVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWN 136
+ KR +I +A +LFDEMP +D V+WN++I+G C K ++ R+LFD E+D V+WN
Sbjct: 188 YAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKC---KEMDSARELFDRFTEKDVVTWN 244
Query: 137 TVISGYAKNGRMDQALKLF----DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
+ISGY G +AL +F DA + V+ ++++ + GD+++ + E
Sbjct: 245 AMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILET 304
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDEG-------KHDLVQAYNTLIAGY---- 241
S S S + + N +DM A +CG D K + +NTLI G
Sbjct: 305 ASVSSSIYVGTPIWNALIDMYA----KCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH 360
Query: 242 --GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
G EE +RL + N V++ +++ G + R+ F
Sbjct: 361 AEGSIEMFEEMQRL----------------KVWPNEVTFIGVILACSHSGRVDEGRKYFS 404
Query: 300 SMGERDTCAWNTMISGYVQISDM-------EEASKLFKEMP-SPDALSWNSIISGFAQIG 351
M RD I Y + DM EEA + M P+A+ W +++ G
Sbjct: 405 LM--RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
Query: 352 DLKVAKDFFERM 363
++++ K E++
Sbjct: 463 NVELGKYANEKL 474
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 134/310 (43%), Gaps = 72/310 (23%)
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G LK A F+ +P+ ++ N ++ G ++ + + L+++M+ G PDR+T + VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 411 SVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIG--------------- 454
C+ L G H ++V + + + N+LI ++ CG +G
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 455 ----------------EACTVFNEMKFYKD------------------------------ 468
EA +F+EM YKD
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMP-YKDQVAWNVMITGCLKCKEMDSARELFDRFTEK 238
Query: 469 -VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
V+TWNAMI GY + G +AL +FK+M+ HP +T +S+L+ACA G +E G+R
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 528 NSMINDYGIEPRV----EHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCR 583
++ + + + + +D+ + G + A+++ + + D + W L+
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR-DLSTWNTLIVGLA 357
Query: 584 VH---GNVEL 590
+H G++E+
Sbjct: 358 LHHAEGSIEM 367
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/721 (28%), Positives = 338/721 (46%), Gaps = 119/721 (16%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
ES+L+ ++K + R +A F N WNT+I+G ++ + LF
Sbjct: 188 ESALIDVFSKNL-------RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFH 240
Query: 92 EM----PQRDIVSWNLIISGYFSC---------------CGSKFV--------------- 117
EM + D +++ +++ S CG++ V
Sbjct: 241 EMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGH 300
Query: 118 -EEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
E ++F +P VSW ++SGY K+ AL++F M +N +T +
Sbjct: 301 MAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISA 360
Query: 177 GDVDSAVG--------FFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKH 228
S V FK DS+ +ALIS ++G++D++ + + D +
Sbjct: 361 CGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQ--RQ 418
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPND-----------------------QGDGK 265
++V N +I + QS K +A RLF R+ + Q G
Sbjct: 419 NIV---NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY 475
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA 325
++ +S+ Y K G + + +LF + +D W +MISG+ + + EA
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 326 SKLFKEM----PSPDALSW-----------------------------------NSIISG 346
LF EM SPD + +++++
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNM 595
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+++ G LK+A+ ++R+P+ + +S +SLI+GY ++ + LF M + G D +
Sbjct: 596 YSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAI 655
Query: 407 SSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKF 465
SS+L + LG Q+H +TK + P + +SL+TMYS+ G+I + C F+++
Sbjct: 656 SSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN- 714
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
D+I W A+I YA HG A +AL+++ MK P +TF+ VL+AC+H GLVEE
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
NSM+ DYGIEP H+ VD LGR G+L+EA IN+M +KPD VWG LL +C++H
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIH 834
Query: 586 GNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
G VEL +VAA+ I LEP +G Y+ L N+ A + WD+ E R LM+ V+K+ G+S
Sbjct: 835 GEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSS 894
Query: 646 V 646
V
Sbjct: 895 V 895
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 156/610 (25%), Positives = 281/610 (46%), Gaps = 89/610 (14%)
Query: 38 QWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRD 97
Q N ++ +L RT ++ +A + + +L+S + +A A +LFD +PQ D
Sbjct: 56 QSNSRLCNL-RTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPD 114
Query: 98 IVSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISG------------ 141
+VS N++ISGY + EE + F +M E + +S+ +VIS
Sbjct: 115 VVSCNIMISGYKQ---HRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSEL 171
Query: 142 -----------------------YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGD 178
++KN R + A K+F N N +I G L N +
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN 231
Query: 179 VDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGI---LLECGDGDEGKHDLV 231
+ F M + DS + S++++ +L + +++CG D V
Sbjct: 232 YGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED------V 285
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDI 291
++ Y + G + EA +F RIPN +VVSW M+ Y K D
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNP-------------SVVSWTVMLSGYTKSNDA 332
Query: 292 VSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASK----LFKEMPSPDALSWNSI 343
SA E+F M E + C ++IS + S + EAS+ +FK D+ ++
Sbjct: 333 FSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 344 ISGFAQIGDLKVAKDFFERM---PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
IS +++ GD+ +++ FE + ++N++ N +I + +++ AI LF++M EG +
Sbjct: 393 ISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTV 459
D ++ S+LSV L L LGKQ+H K+ ++ DL + +SL T+YS+CG++ E+ +
Sbjct: 451 TDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F + F KD W +MI G+ +G +A+ LF +M P T +VL C+
Sbjct: 508 FQGIPF-KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ G ++ + GI+ ++ ++ V++ + G L+ A + + +P + D +L+
Sbjct: 567 LPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSLI 624
Query: 580 GSCRVHGNVE 589
HG ++
Sbjct: 625 SGYSQHGLIQ 634
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 198/610 (32%), Positives = 313/610 (51%), Gaps = 51/610 (8%)
Query: 70 WNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPE 129
WN I V R + ++ LF EM + N C ++ + G EM
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC-ARLADVG---CCEMVH 75
Query: 130 RDCVS---WNTVISG------YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
+ W+ V G + K +D A K+F+ MPER+A + NA+++GF +G D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL---------V 231
A F+ M + S + L+++ + + +L E H + V
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLL-------EAMHAVGIRLGVDVQV 188
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDI 291
NT I+ YG+ G ++ A+ +F+ I D+GD R VVSWNSM Y G+
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAI--DRGD---------RTVVSWNSMFKAYSVFGEA 237
Query: 292 VSARELFDSM-GERDTCAWNTMISGYVQISDMEEA-------SKLFKEMPSPDALSWNSI 343
A L+ M E +T I+ + E S D + N+
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
IS +++ D A+ F+ M + +SW +I+GY + D A+ LF M GEKPD
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 404 HTLSSVLSVCTGLVDLYLGKQMHQL--VTKTVIPDLPINNSLITMYSRCGAIGEACTVFN 461
TL S++S C L GK + + ++ I N+LI MYS+CG+I EA +F+
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 462 EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
K V+TW MI GYA +G+ ++AL+LF +M L P +ITF++VL ACAH+G +E
Sbjct: 418 NTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 522 EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
+G F+ M Y I P ++H++ VD+LGR+G+L+EA++LI +M KPD +WGALL +
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Query: 582 CRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQT 641
C++H NV++A+ AA++L +LEP+ + PYV + N+YA +WD R+R +M+++N+KK
Sbjct: 537 CKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYP 596
Query: 642 GYSWVDSSNR 651
G S + + +
Sbjct: 597 GESVIQVNGK 606
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 37/276 (13%)
Query: 1 MSTCLMRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFD 60
+ST + + Q P TL L H + + N IS ++ AR FD
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 61 SMKHRNTVTWNTLISGHVKRREIAKARQLFDEM----PQRDIVSWNLIISGYFSCCGSKF 116
M R V+W +ISG+ ++ ++ +A LF M + D+V+ +ISG CG
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG----CGKFG 371
Query: 117 VEEGRKLFDEMPE-----RDCVS-WNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVI 170
E K D + RD V N +I Y+K G + +A +FD PE+ V+ +I
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 171 TGFLLNGDVDSAVGFFKRMPECD----SASLSALISGLVRNGELDMAAGILLECGDGDEG 226
G+ LNG A+ F +M + D + A++ +G L+ G E
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE----------KGWEY 481
Query: 227 KHDLVQAYNT---------LIAGYGQSGKVEEARRL 253
H + Q YN ++ G+ GK+EEA L
Sbjct: 482 FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 266/511 (52%), Gaps = 46/511 (9%)
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
+DC N I+ R+D A+ M E N NA+ GF+ ++ + RM
Sbjct: 803 QDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM 862
Query: 190 PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
+ S S LV+ G L+ G V+ TLI Y +G+
Sbjct: 863 LRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGR--- 919
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAW 309
I AR++FD M ERD AW
Sbjct: 920 -----------------------------------------IREARKVFDEMPERDDIAW 938
Query: 310 NTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
TM+S Y ++ DM+ A+ L +M + + N +I+G+ +G+L+ A+ F +MP K++I
Sbjct: 939 TTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDII 998
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
SW ++I GY +N+ Y+ AI +F +M EG PD T+S+V+S C L L +GK++H
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 430 TKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+ + D+ I ++L+ MYS+CG++ A VF + K++ WN++I G A+HG A +A
Sbjct: 1059 LQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWNSIIEGLAAHGFAQEA 1117
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
L++F +M+ + P +TF+SV AC HAGLV+EGRR + SMI+DY I VEH+ V
Sbjct: 1118 LKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVH 1177
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGP 608
+ + G + EA++LI +M +P+ +WGALL CR+H N+ +A++A L+ LEP +SG
Sbjct: 1178 LFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGY 1237
Query: 609 YVLLYNMYANLELWDDAERVRVLMEEKNVKK 639
Y LL +MYA W D +R M E ++K
Sbjct: 1238 YFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 178/421 (42%), Gaps = 65/421 (15%)
Query: 17 LCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISG 76
L LA+ KT+ N+ L N+ I+ RL A + M+ N +N L G
Sbjct: 788 LLESALAAMIKTSLNQDCRL--MNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKG 845
Query: 77 HVKRREIAKARQLFDEMPQRDIVS---------------------------WNL------ 103
V ++ +L+ M RD VS W
Sbjct: 846 FVTCSHPIRSLELYVRM-LRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHV 904
Query: 104 ----IISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
+ ++S G + E RK+FDEMPERD ++W T++S Y + MD A L + M
Sbjct: 905 KIQTTLIDFYSATGR--IREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMS 962
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
E+N +SN +I G++ G+++ A F +MP D S + +I G +N A + +
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
+EG +T+I+ G +E + + + F +V +
Sbjct: 1023 M--MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNG---------FVLDVYIGS 1071
Query: 280 SMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SP 335
+++ Y K G + A +F ++ +++ WN++I G +EA K+F +M P
Sbjct: 1072 ALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKP 1131
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
+A+++ S+ + G + + + +++I S+++ E Y G + LFS+
Sbjct: 1132 NAVTFVSVFTACTHAGLVDEGRRIY-----RSMIDDYSIVSNV---EHYGGMVHLFSKAG 1183
Query: 396 L 396
L
Sbjct: 1184 L 1184
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 123/317 (38%), Gaps = 84/317 (26%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W +S R + A + + M +N T N LI+G++ + +A LF++MP +DI
Sbjct: 938 WTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDI 997
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISG------------- 141
+SW +I GY +K E +F +M E D V+ +TVIS
Sbjct: 998 ISWTTMIKGY---SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 1054
Query: 142 ----------------------YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
Y+K G +++AL +F +P++N N++I G +G
Sbjct: 1055 HMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFA 1114
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
A+ F +M E +S +A+ + ++
Sbjct: 1115 QEALKMFAKM-EMESVKPNAV--------------------------------TFVSVFT 1141
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
+G V+E RR++ + +D NV + M+ + K G I A EL
Sbjct: 1142 ACTHAGLVDEGRRIYRSMIDDYS--------IVSNVEHYGGMVHLFSKAGLIYEALELIG 1193
Query: 300 SMG-ERDTCAWNTMISG 315
+M E + W ++ G
Sbjct: 1194 NMEFEPNAVIWGALLDG 1210
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/718 (27%), Positives = 336/718 (46%), Gaps = 113/718 (15%)
Query: 19 SRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHV 78
SR LA+ + + + + +I+TG FD+ +T N ++ +
Sbjct: 12 SRTLATLRQLRQPSPATFLDTRRVDARIIKTG--------FDT----DTCRSNFIVEDLL 59
Query: 79 KRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTV 138
+R +++ AR+++DEMP ++ VS N +ISG+ + V R LFD MP+R V+W +
Sbjct: 60 RRGQVSAARKVYDEMPHKNTVSTNTMISGHVK---TGDVSSARDLFDAMPDRTVVTWTIL 116
Query: 139 ISGYAKNGRMDQALKLF-------------------------DAMPERNAVS-------- 165
+ YA+N D+A KLF DA+P+ NAV
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQ-NAVGQVHAFAVK 175
Query: 166 -----------SNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
SN ++ + +D A F+ +PE DS + + LI+G ++G +
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
+ L+ D + SG ++ L D Q F R+
Sbjct: 236 HLFLKMRQSGHQPSD-----------FTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM-- 332
N ++ Y K ++ R LFD M E D ++N +IS Y Q E + F+EM
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 333 --------PSPDALSW-----------------------------NSIISGFAQIGDLKV 355
P LS NS++ +A+ +
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
A+ F+ +PQ+ +SW +LI+GY + + ++LF++M+ + D+ T ++VL
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 416 LVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
L LGKQ+H + ++ + ++ + L+ MY++CG+I +A VF EM ++ ++WNA
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNA 523
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
+I +A +G A+ F +M + P ++ + VL AC+H G VE+G F +M Y
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVA 594
GI P+ +H+A +D+LGR G+ EA L++ MP +PD+ +W ++L +CR+H N LA+ A
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643
Query: 595 AQALISLEP-ESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
A+ L S+E + YV + N+YA W+ V+ M E+ +KK YSWV+ +++
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 701
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/553 (31%), Positives = 296/553 (53%), Gaps = 45/553 (8%)
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
+E RK+FDE+P+ + +WNT+I YA ++ F M + N FL+
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 177 GD----------------VDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLEC 220
V SAVG D ++LI G+LD A +
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVG-------SDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
+ D V ++N++I G+ Q G ++A LF ++ ++ + + V+
Sbjct: 193 KEKD------VVSWNSMINGFVQKGSPDKALELFKKMESED---------VKASHVTMVG 237
Query: 281 MMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPSPD 336
++ K+ ++ R++ + E + N M+ Y + +E+A +LF M D
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 337 ALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
++W +++ G+A D + A++ MPQK++++WN+LI+ Y++N A+ +F ++QL
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 397 EGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIG 454
+ K ++ TL S LS C + L LG+ +H + K I + + ++LI MYS+CG +
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
++ VFN ++ +DV W+AMIGG A HG +A+++F +M+ + P +TF +V AC
Sbjct: 418 KSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAV 574
+H GLV+E F+ M ++YGI P +H+A VD+LGR G L++A+ I +MP+ P +V
Sbjct: 477 SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSV 536
Query: 575 WGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEE 634
WGALLG+C++H N+ LA++A L+ LEP + G +VLL N+YA L W++ +R M
Sbjct: 537 WGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRV 596
Query: 635 KNVKKQTGYSWVD 647
+KK+ G S ++
Sbjct: 597 TGLKKEPGCSSIE 609
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 178/390 (45%), Gaps = 56/390 (14%)
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
+A +E AR++FD IP + N +WN+++ Y D V +
Sbjct: 71 MAALSSFASLEYARKVFDEIP-------------KPNSFAWNTLIRAYASGPDPVLSIWA 117
Query: 298 FDSMGERDTCAWNT-----MISGYVQISDMEEASKL----FKEMPSPDALSWNSIISGFA 348
F M C N +I ++S + L K D NS+I +
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 177
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
GDL A F + +K+++SWNS+I G+ + A+ELF +M+ E K T+
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMK--- 464
VLS C + +L G+Q+ + + V +L + N+++ MY++CG+I +A +F+ M+
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 465 ---------------------------FYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
KD++ WNA+I Y +G +AL +F +++
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 498 LK-IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQL 556
K + IT +S L+ACA G +E G R +S I +GI ++ + + + G L
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 557 QEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+++ ++ NS+ K D VW A++G +HG
Sbjct: 417 EKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 146/303 (48%), Gaps = 29/303 (9%)
Query: 319 ISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGY 378
SD ASKLF ++ + L+ A+ F+ +P+ N +WN+LI Y
Sbjct: 59 FSDPYSASKLFA-------------MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 379 DKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PD 436
D +I F M E + P+++T ++ + L LG+ +H + K+ + D
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSD 165
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
+ + NSLI Y CG + AC VF +K KDV++WN+MI G+ G ALELFK+M+
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIK-EKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 497 RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQL 556
+ +++T + VL+ACA +E G RQ S I + + + + +D+ + G +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFG-RQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 557 QEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQ-----------VAAQALISLEPES 605
++A L ++M K D W +L + + E A+ VA ALIS ++
Sbjct: 284 EDAKRLFDAMEEK-DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQN 342
Query: 606 SGP 608
P
Sbjct: 343 GKP 345
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/553 (21%), Positives = 211/553 (38%), Gaps = 152/553 (27%)
Query: 36 LHQWNKKISHLIRTGRLSE---------------------ARTFFDSMKHRNTVTWNTLI 74
L Q + H+IRTG S+ AR FD + N+ WNTLI
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 75 SGHVKRREIAKARQLFDEM-------PQR------------------------------- 96
+ + + F +M P +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 97 --DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
D+ N +I YFSC ++ K+F + E+D VSWN++I+G+ + G D+AL+L
Sbjct: 163 GSDVFVANSLIHCYFSCGD---LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
F M + +S+ + G L SA +RN E
Sbjct: 220 FKKMESEDVKASHVTMVGVL------SAC-------------------AKIRNLEFGRQV 254
Query: 215 GILLECGDGDEGKHDL-VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
C +E + ++ + N ++ Y + G +E+A+RLFD + +
Sbjct: 255 -----CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-------------EK 296
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP 333
+ V+W +M+ Y D +ARE+ +SM ++D AWN +IS Y Q EA +F E+
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 334 SPDALSWNSI----------------------------------------ISGFAQIGDL 353
+ N I I +++ GDL
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 354 KVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
+ +++ F + ++++ W+++I G + A+++F +MQ KP+ T ++V C
Sbjct: 417 EKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
Query: 414 --TGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
TGLVD HQ+ + ++P+ ++ + R G + +A M
Sbjct: 477 SHTGLVD-EAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS 535
Query: 471 TWNAMIGGYASHG 483
W A++G H
Sbjct: 536 VWGALLGACKIHA 548
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 131/303 (43%), Gaps = 57/303 (18%)
Query: 1 MSTCLMRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFD 60
+S C ++ L+ R +CS ++ N N L N + + G + +A+ FD
Sbjct: 239 LSAC-AKIRNLEFGRQVCS--YIEENRVNVN----LTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 61 SMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY------------ 108
+M+ ++ VTW T++ G+ + AR++ + MPQ+DIV+WN +IS Y
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIV 351
Query: 109 --------------------FSCCGSKFVEEGRKLFDEMPERDCVSWN-----TVISGYA 143
S C E + ++ + N +I Y+
Sbjct: 352 FHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYS 411
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSA 199
K G ++++ ++F+++ +R+ +A+I G ++G + AV F +M E + + +
Sbjct: 412 KCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTN 471
Query: 200 LISGLVRNGELDMAAGIL--LECGDG--DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ G +D A + +E G E KH Y ++ G+SG +E+A + +
Sbjct: 472 VFCACSHTGLVDEAESLFHQMESNYGIVPEEKH-----YACIVDVLGRSGYLEKAVKFIE 526
Query: 256 RIP 258
+P
Sbjct: 527 AMP 529
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 203/625 (32%), Positives = 334/625 (53%), Gaps = 59/625 (9%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD 125
N N++++ + K R +A A +F + + D S+N+++ GY S+ + + KLFD
Sbjct: 75 NGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVR---SRRLWDALKLFD 131
Query: 126 EMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN----GDVDS 181
MPER CVS+ T+I GYA+N + +A++LF M RN G +LN V S
Sbjct: 132 VMPERSCVSYTTLIKGYAQNNQWSEAMELFREM--RN--------LGIMLNEVTLATVIS 181
Query: 182 AVGFFKRMPECDSASLSALISGLVRNGELDMAAGIL------LECGDG----DEGKHDLV 231
A + +C L +L L G + ++ +L L D DE +
Sbjct: 182 ACSHLGGIWDCRM--LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL 239
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPND-------QGDGKEDGRRFRRNVVSWNSMMMC 284
+N ++ GY ++G +E+A LFD+I DG + +V + M+ C
Sbjct: 240 VTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 299
Query: 285 YVKVGDIV-------SARELFDSMG--------ERDTCAWN----TMISGYVQISDMEEA 325
+K +++ SAR + S G +R ++ T+I Y +D++ A
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 359
Query: 326 SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
+ F+ S N++I+GF + G ++ A++ F++ K++ SWN++I+GY ++ +
Sbjct: 360 LQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQ 419
Query: 386 GAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT-KTVIPDLPINNSL 443
A+ LF +M + KPD T+ SV S + L L GK+ H + T+ P+ + ++
Sbjct: 420 LALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAI 479
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKD--VITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
I MY++CG+I A +F++ K + WNA+I G A+HG A AL+L+ ++ L I
Sbjct: 480 IDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P ITF+ VL+AC HAGLVE G+ F SM +D+GIEP ++H+ VD+LG+ G+L+EA +
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 599
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLEL 621
+I MPVK D +WG LL + R HGNVE+A++AA L +++P G V+L N+YA+
Sbjct: 600 MIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGR 659
Query: 622 WDDAERVRVLMEEKNVKKQTGYSWV 646
W+D VR M ++V+ +S V
Sbjct: 660 WEDVALVREEMRTRDVEWSRAFSGV 684
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 239/532 (44%), Gaps = 104/532 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
+N + +R+ RL +A FD M R+ V++ TLI G+ + + ++A +LF EM I
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGI 169
Query: 99 VSWNLIISGYFSCC----------------------GSKFV--------------EEGRK 122
+ + ++ S C G FV ++ RK
Sbjct: 170 MLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK 229
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
LFDEMPER+ V+WN +++GY+K G ++QA +LFD + E++ VS +I G L +D A
Sbjct: 230 LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEA 289
Query: 183 VGFFKRMPECDSASLSALISGLVRNGELDMAA--GILLECGDGDEG--KHDLVQAYNTLI 238
+ ++ M C ++ L+ + + G+ L G +D +QA T+I
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQA--TII 347
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
Y S ++ A + F+ D ++ S N+++ +VK G + ARE+F
Sbjct: 348 HFYAVSNDIKLALQQFEASVKD-------------HIASRNALIAGFVKNGMVEQAREVF 394
Query: 299 DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDL 353
D ++D +WN MISGY Q + A LF+EM S PDA++ S+ S + +G L
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 354 ---KVAKDF--FERMP----------------------------QKNLIS-----WNSLI 375
K A D+ F +P KN+ S WN++I
Sbjct: 455 EEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAII 514
Query: 376 AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKT- 432
G + K A++L+S +Q KP+ T VLS C GLV+ LGK + +
Sbjct: 515 CGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVE--LGKTYFESMKSDH 572
Query: 433 -VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+ PD+ ++ + + G + EA + +M DV+ W ++ +HG
Sbjct: 573 GIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 195/649 (30%), Positives = 319/649 (49%), Gaps = 75/649 (11%)
Query: 56 RTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC---- 111
R + K N + G R + A QLFDEM + D WN++I G+ SC
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 112 ----------------------------CGSKFVEEGRKLFDEMPERDCVS----WNTVI 139
G +EEG+K+ + + VS N++I
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 140 SGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSA 195
S Y K G A K+F+ MPER+ VS N++I+G+L GD S++ FK M +C D
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF 232
Query: 196 SLSALISGLVRNGELDMAAGI-------LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
S + + M I +E GD V +++ Y + G+V
Sbjct: 233 STMSALGACSHVYSPKMGKEIHCHAVRSRIETGD--------VMVMTSILDMYSKYGEVS 284
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCA 308
A R+F+ + +RN+V+WN M+ CY + G + A F M E++
Sbjct: 285 YAERIFNGM-------------IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQ 331
Query: 309 WNTMIS-GYVQISDMEEASKL----FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
+ + S + S + E + + P + ++I + + G LK A+ F+RM
Sbjct: 332 PDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM 391
Query: 364 PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
+KN+ISWNS+IA Y +N A+ELF ++ PD T++S+L + L G+
Sbjct: 392 AEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Query: 424 QMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
++H + K+ + I NSL+ MY+ CG + +A FN + KDV++WN++I YA H
Sbjct: 452 EIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-LLKDVVSWNSIIMAYAVH 510
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
G ++ LF +M +++P TF S+L AC+ +G+V+EG F SM +YGI+P +EH
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 543 FASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLE 602
+ +D++GR G A + MP P +WG+LL + R H ++ +A+ AA+ + +E
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 603 PESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+++G YVLL NMYA W+D R+++LME K + + + S V++ +
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGK 679
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 231/515 (44%), Gaps = 57/515 (11%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N IS ++ G +A F+ M R+ V+WN++ISG++ + + LF EM +
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 100 SWNLIISGYFSCCGSKFVEE-GRKLF-----DEMPERDCVSWNTVISGYAKNGRMDQALK 153
C + + G+++ + D + +++ Y+K G + A +
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE--------CDSASL---SALIS 202
+F+ M +RN V+ N +I + NG V A F++M E S +L SA++
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
G +G M G L H +++ LI YG+ G+++ A +FDR+
Sbjct: 349 GRTIHG-YAMRRGFL---------PHMVLE--TALIDMYGECGQLKSAEVIFDRMA---- 392
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF----DSMGERDTCAWNTMISGYVQ 318
+NV+SWNS++ YV+ G SA ELF DS D+ +++ Y +
Sbjct: 393 ---------EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAE 443
Query: 319 ISDMEEASK----LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
+ E + + K + + NS++ +A GDL+ A+ F + K+++SWNS+
Sbjct: 444 SLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSI 503
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKT 432
I Y + + ++ LFS+M P++ T +S+L+ C +G+VD G + + + +
Sbjct: 504 IMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD--EGWEYFESMKRE 561
Query: 433 --VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
+ P + ++ + R G A EM F W +++ +H A
Sbjct: 562 YGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEF 621
Query: 491 LFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
+Q+ +++ H ++ +LN A AG E+ R
Sbjct: 622 AAEQIFKME-HDNTGCYVLLLNMYAEAGRWEDVNR 655
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 145/368 (39%), Gaps = 76/368 (20%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGH-VKRREIAKARQLFDEMPQR- 96
WN I R GR+++A F M +N + + + S + + I + R + +R
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRG 360
Query: 97 ---DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
+V +I Y C K E +FD M E++ +SWN++I+ Y +NG+ AL+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAE---VIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMA 213
LF + + + V DS ++++++ +
Sbjct: 418 LFQELWDSSLVP---------------------------DSTTIASILPAYAES------ 444
Query: 214 AGILLECGDGDEGKHDLVQA--------YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
L +G E +V++ N+L+ Y G +E+AR+ F+ I
Sbjct: 445 ----LSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHI-------- 492
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM-GERDTCAWNTMIS--GYVQISDM 322
++VVSWNS++M Y G + LF M R +T S IS M
Sbjct: 493 -----LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547
Query: 323 -EEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLI 375
+E + F+ M P + ++ + G+ AK F E MP W SL+
Sbjct: 548 VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLL 607
Query: 376 AGYDKNED 383
++D
Sbjct: 608 NASRNHKD 615
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/639 (31%), Positives = 307/639 (48%), Gaps = 99/639 (15%)
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
DI N I+ Y F+ LFDEMP+RD VSWNT+ISGY G+++ A LF
Sbjct: 34 DIYVSNRILDSYIK---FGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 157 AMP---------------------------------------ERNAVSSNAVITGFLLNG 177
M E N ++++ +
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 178 DVDSAVGFFKRMPECDSASLSALISGLVRN----------GELDMAAGILLECGDGDE-- 225
V+ A FK + E +S S +ALI+G V+ G ++M A + ++ G
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 226 ----------------------GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
G + N +I+ Y G V +A+R+FD
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD-------- 262
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYV-- 317
G ++++SWNSM+ + K SA ELF M E D + ++S
Sbjct: 263 ----GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGE 318
Query: 318 --QISDMEEASKLFKEMPSPDALSWNSIISGFAQI--GDLKVAKDFFERMPQKNLISWNS 373
QI + K+ + N++IS + Q G ++ A FE + K+LISWNS
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT- 432
+I G+ + + A++ FS ++ K D + S++L C+ L L LG+Q+H L TK+
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF 492
+ + + +SLI MYS+CG I A F ++ + WNAMI GYA HGL +L+LF
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
QM + ++TF ++L AC+H GL++EG N M Y I+PR+EH+A+ VD+LGR
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 553 QGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLL 612
G + +A +LI SMP+ PD V LG CR G +E+A A L+ +EPE YV L
Sbjct: 559 AGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSL 618
Query: 613 YNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+MY++L+ W++ V+ +M+E+ VKK G+SW++ N+
Sbjct: 619 SHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQ 657
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 203/673 (30%), Positives = 338/673 (50%), Gaps = 39/673 (5%)
Query: 2 STCLMRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDS 61
ST L +L+ R L + S+ + N ++ + G+L++A + F++
Sbjct: 15 STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNA 74
Query: 62 MKHRNTVTWNTLISGHVKRREIAKAR---QLFDEMPQRDIVSWNLIISGYF----SCCGS 114
+ ++ V+WN+LI+G+ + I+ + QLF EM +DI+ ++G F S S
Sbjct: 75 IICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSS 134
Query: 115 KFVEEGRKLFDEMPERDCVSWNTVISG-YAKNGRMDQALKLFDAMPERNAVSSNAVITGF 173
+ L +M + +T + G Y K G ++ LK+F MPERN + + +++G+
Sbjct: 135 TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 174 LLNGDVDSAV---GFFKRMPECDSAS---LSALISGLVRNGELDMAAGILLECGDGDEGK 227
G V+ A+ F R E S S +A++S L + + G + C G
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLA--ATIYVGLGRQIHCITIKNGL 252
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
V N L+ Y + + EA ++FD GD RN ++W++M+ Y +
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFD----SSGD---------RNSITWSAMVTGYSQ 299
Query: 288 VGDIVSARELFDSMGERDTCAWNTMISGYVQ----ISDMEEA----SKLFKEMPSPDALS 339
G+ + A +LF M I G + I +EE S L K +
Sbjct: 300 NGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFA 359
Query: 340 WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
+++ +A+ G L A+ F+ + ++++ W SLI+GY +N D + A+ L+ +M+ G
Sbjct: 360 TTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGI 419
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACT 458
P+ T++SVL C+ L L LGKQ+H K ++PI ++L TMYS+CG++ +
Sbjct: 420 IPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNL 479
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
VF KDV++WNAMI G + +G +ALELF++M + P +TF+++++AC+H G
Sbjct: 480 VFRRTP-NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
VE G FN M + G++P+V+H+A VD+L R GQL+EA + I S + +W L
Sbjct: 539 FVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRIL 598
Query: 579 LGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
L +C+ HG EL A + L++L S YV L +Y L D ERV M V
Sbjct: 599 LSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVS 658
Query: 639 KQTGYSWVDSSNR 651
K+ G SW++ N+
Sbjct: 659 KEVGCSWIELKNQ 671
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 272/520 (52%), Gaps = 56/520 (10%)
Query: 138 VISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASL 197
++ YA + A K+FD +PERN + N +I ++ NG V F M C+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN---- 135
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG---YGQSGKVEEARRLF 254
VR +L C T++ G +G + KV + LF
Sbjct: 136 -------VRPDHYTFPC-VLKAC-----------SCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
N ++ Y K G + AR + D M RD +WN+++
Sbjct: 177 ----------------------VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 315 GYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKV--AKDFFERMPQKNL 368
GY Q ++A ++ +EM S DA + S++ + V KD F +M +K+L
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL 274
Query: 369 ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQL 428
+SWN +I Y KN A+EL+S+M+ +G +PD +++SVL C L LGK++H
Sbjct: 275 VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 429 VT-KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVD 487
+ K +IP+L + N+LI MY++CG + +A VF MK +DV++W AMI Y G D
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISAYGFSGRGCD 393
Query: 488 ALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFV 547
A+ LF +++ + P I F++ L AC+HAGL+EEGR F M + Y I PR+EH A V
Sbjct: 394 AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMV 453
Query: 548 DILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG 607
D+LGR G+++EA I M ++P++ VWGALLG+CRVH + ++ +AA L L PE SG
Sbjct: 454 DLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSG 513
Query: 608 PYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
YVLL N+YA W++ +R +M+ K +KK G S V+
Sbjct: 514 YYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 183/423 (43%), Gaps = 54/423 (12%)
Query: 115 KFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFL 174
K V RK+FDE+PER+ + N +I Y NG + +K+F M N + L
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 175 LNGDVDSAVGFFKRMPECDSASLSALISGL-VRNGELDMAAGILLECGDGDEGKHDL--- 230
+ +++ SA+ L S L V NG + M +CG E + L
Sbjct: 148 KACSCSGTIVIGRKIH--GSATKVGLSSTLFVGNGLVSMYG----KCGFLSEARLVLDEM 201
Query: 231 ----VQAYNTLIAGYGQSGKVEEARRLFD-----RIPNDQG----------DGKEDGRRF 271
V ++N+L+ GY Q+ + ++A + +I +D G + + +
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 272 ---------RRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQ 318
++++VSWN M+ Y+K V A EL+ M E D + +++
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 319 ISDMEEASKLF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
S + K+ ++ P+ L N++I +A+ G L+ A+D FE M ++++SW ++
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--T 432
I+ Y + A+ LFS++Q G PD + L+ C+ L G+ +L+T
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG------LAV 486
+ P L ++ + R G + EA +M + W A++G H LA
Sbjct: 442 ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501
Query: 487 DAL 489
D L
Sbjct: 502 DKL 504
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 154/393 (39%), Gaps = 62/393 (15%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDE 92
SS L N +S + G LSEAR D M R+ V+WN+L+ G+ + + A ++ E
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 93 MPQRDIVSWNLIISGYFSCCGSKFVEE---GRKLFDEMPERDCVSWNTVISGYAKNGRMD 149
M I ++ + E + +F +M ++ VSWN +I Y KN
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC---DSASLSALISGLVR 206
+A++L+ M +G AV +P C + SL I G +
Sbjct: 292 EAVELYSRMEA---------------DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+L +LLE N LI Y + G +E+AR +F+ + +
Sbjct: 337 RKKL--IPNLLLE---------------NALIDMYAKCGCLEKARDVFENMKS------- 372
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDM 322
R+VVSW +M+ Y G A LF + + D+ A+ T ++ +
Sbjct: 373 ------RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLL 426
Query: 323 EEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIA 376
EE FK M +P ++ + G +K A F + M + N W +L+
Sbjct: 427 EEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLG 486
Query: 377 GYDKNEDYK-GAIELFSQMQLEGEKPDRHTLSS 408
+ D G + QL E+ + L S
Sbjct: 487 ACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 210/699 (30%), Positives = 353/699 (50%), Gaps = 99/699 (14%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTV-----TWNTLISGHVKRREIAKARQLFDEM- 93
N I+ L ++ EA FD + ++ T+ +LI R +A+ R++ D +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 94 ---PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQ 150
+ D + N I+S Y C GS + + R++FD MPER+ VS+ +VI+GY++NG+ +
Sbjct: 95 NSNCKYDTILNNHILSMYGKC-GS--LRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 151 ALKLF------DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSAS----LSAL 200
A++L+ D +P++ A S +I + DV ++ + +S+S +AL
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGS--IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNAL 209
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI--- 257
I+ VR ++ A+ + G K DL+ +++++IAG+ Q G EA +
Sbjct: 210 IAMYVRFNQMSDASRVFY----GIPMK-DLI-SWSSIIAGFSQLGFEFEALSHLKEMLSF 263
Query: 258 ----PND--------------------QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
PN+ Q G N ++ S+ Y + G + S
Sbjct: 264 GVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNS 323
Query: 294 ARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALS---------- 339
AR +FD + DT +WN +I+G +EA +F +M S PDA+S
Sbjct: 324 ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTK 383
Query: 340 ----------------W---------NSIISGFAQIGDLKVAKDFFERMPQK-NLISWNS 373
W NS+++ + DL + FE + +SWN+
Sbjct: 384 PMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNT 443
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT- 432
++ ++E + LF M + +PD T+ ++L C + L LG Q+H KT
Sbjct: 444 ILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG 503
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF 492
+ P+ I N LI MY++CG++G+A +F+ M +DV++W+ +I GYA G +AL LF
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVGYAQSGFGEEALILF 562
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
K+MK I P ++TF+ VL AC+H GLVEEG + + +M ++GI P EH + VD+L R
Sbjct: 563 KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLAR 622
Query: 553 QGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLL 612
G+L EA I+ M ++PD VW LL +C+ GNV LAQ AA+ ++ ++P +S +VLL
Sbjct: 623 AGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLL 682
Query: 613 YNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+M+A+ W++A +R M++ +VKK G SW++ ++
Sbjct: 683 CSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 302/567 (53%), Gaps = 85/567 (14%)
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+F + E + + WNT+ G+A + ALKL+ M + G L N +
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM----------ISLGLLPN-----S 134
Query: 183 VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
F + C A A G +G + + L C D D + + +LI+ Y
Sbjct: 135 YTFPFVLKSC--AKSKAFKEGQQIHGHV-----LKLGC-DLD------LYVHTSLISMYV 180
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG 302
Q+G++E+A ++FD+ P+ R+VVS+ +++ Y G I +A++LFD +
Sbjct: 181 QNGRLEDAHKVFDKSPH-------------RDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQ--------- 349
+D +WN MISGY + + +EA +LFK+M PD + +++S AQ
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 350 --------------------------IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNED 383
G+L+ A FER+P K++ISWN+LI GY
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT---VIPDLPIN 440
YK A+ LF +M GE P+ T+ S+L C L + +G+ +H + K V +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
SLI MY++CG I A VFN + +K + +WNAMI G+A HG A + +LF +M+++ I
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 501 HPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAM 560
P ITF+ +L+AC+H+G+++ GR F +M DY + P++EH+ +D+LG G +EA
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 561 DLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLE 620
++IN M ++PD +W +LL +C++HGNVEL + A+ LI +EPE+ G YVLL N+YA+
Sbjct: 527 EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 621 LWDDAERVRVLMEEKNVKKQTGYSWVD 647
W++ + R L+ +K +KK G S ++
Sbjct: 587 RWNEVAKTRALLNDKGMKKVPGCSSIE 613
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 146/563 (25%), Positives = 256/563 (45%), Gaps = 80/563 (14%)
Query: 36 LHQWNKKISHLIRTGRLSE-------ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQ 88
LH N +S LI LS A + F +++ N + WNT+ GH + A +
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 89 LFDEMPQRDIVSWNLIISGYF------SCCGSKFVEEGRKLFDEMPERDC----VSWNTV 138
L+ M +S L+ + Y SC SK +EG+++ + + C ++
Sbjct: 121 LYVCM-----ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 175
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLS 198
IS Y +NGR++ A K+FD P R+ VS A+I G+ G +++A F +P D S +
Sbjct: 176 ISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWN 235
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
A+ISG G A + + + + T+++ QSG +E R++ I
Sbjct: 236 AMISGYAETGNYKEALELFKDMMKTNVRPDESTMV--TVVSACAQSGSIELGRQVHLWI- 292
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQ 318
+D G F N+ N+++ Y K G++ +A LF+ + +D +WNT+I GY
Sbjct: 293 DDHG--------FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 319 ISDMEEASKLFKEM----PSPDALS------------------W---------------- 340
++ +EA LF+EM +P+ ++ W
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 341 ---NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
S+I +A+ GD++ A F + K+L SWN++I G+ + + +LFS+M+
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGE 455
G +PD T +LS C+ L LG+ + + +T+ + P L +I + G E
Sbjct: 465 GIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKE 524
Query: 456 ACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI-TFISVLNAC 514
A + N M+ D + W +++ HG V+ E F + +KI P +++ + N
Sbjct: 525 AEEMINMMEMEPDGVIWCSLLKACKMHG-NVELGESFAE-NLIKIEPENPGSYVLLSNIY 582
Query: 515 AHAGLVEEGRRQFNSMINDYGIE 537
A AG E + +++ND G++
Sbjct: 583 ASAGRWNEVAKT-RALLNDKGMK 604
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 33/259 (12%)
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
L A F+ + + NL+ WN++ G+ + D A++L+ M G P+ +T VL
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 413 CTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVF----------- 460
C G+Q+H V K DL ++ SLI+MY + G + +A VF
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 461 --------------NEMKFY-----KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
N K + KDV++WNAMI GYA G +ALELFK M + +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P T ++V++ACA +G +E G RQ + I+D+G ++ + +D+ + G+L+ A
Sbjct: 264 PDESTMVTVVSACAQSGSIELG-RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 562 LINSMPVKPDKAVWGALLG 580
L +P K D W L+G
Sbjct: 323 LFERLPYK-DVISWNTLIG 340
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 201/665 (30%), Positives = 337/665 (50%), Gaps = 80/665 (12%)
Query: 47 IRTGRLSEARTF-FDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP---QRDIVSWN 102
R G+L AR FD ++V +N+LIS + K + AKA +F+ M +RD+VSW+
Sbjct: 78 FRLGKLVHARLIEFDI--EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWS 135
Query: 103 LIISGY--------------------------------FSCCGSKFVEEGRKLFDEMP-- 128
+++ Y +C S FV GR +
Sbjct: 136 AMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT 195
Query: 129 ---ERDCVSWNTVISGYAK-NGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
E D ++I + K + A K+FD M E N V+ +IT + G A+
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 185 FFKRMP----ECDSASLSALISGLVRNGELDMAAGI---LLECGDGDEGKHDLVQAYNTL 237
FF M E D +LS++ S L + + + G D+ + LV Y
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMY--- 312
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS-ARE 296
A G V++ R++FDR+ + +V+SW +++ Y+K ++ + A
Sbjct: 313 -AKCSADGSVDDCRKVFDRMED-------------HSVMSWTALITGYMKNCNLATEAIN 358
Query: 297 LFDSM-----GERDTCAWNTMISGYVQISDMEEASKL----FKEMPSPDALSWNSIISGF 347
LF M E + +++ +SD ++ FK + ++ NS+IS F
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 348 AQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS 407
+ ++ A+ FE + +KNL+S+N+ + G +N +++ A +L S++ T +
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 408 SVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFY 466
S+LS + + G+Q+H V K + + P+ N+LI+MYS+CG+I A VFN M+
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-N 537
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
++VI+W +MI G+A HG A+ LE F QM + P +T++++L+AC+H GLV EG R
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
FNSM D+ I+P++EH+A VD+L R G L +A + IN+MP + D VW LG+CRVH
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657
Query: 587 NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
N EL ++AA+ ++ L+P Y+ L N+YA W+++ +R M+E+N+ K+ G SW+
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Query: 647 DSSNR 651
+ ++
Sbjct: 718 EVGDK 722
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 27/319 (8%)
Query: 281 MMMCYVKVGDI---VSARELFDSMGER--DTCAWNTMISGYVQISDMEEA----SKLFKE 331
+++ ++ GD+ VSA +L G R D+ +++++ ++ D ++L +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 332 MPSPDALSWNSIISGFAQIGDLKVAKDFFE---RMPQKNLISWNSLIAGYDKNEDYKGAI 388
PD++ +NS+IS +++ GD A+D FE R +++++SW++++A Y N AI
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITM 446
++F + G P+ + ++V+ C+ + +G+ + KT D+ + SLI M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 447 YSRC-GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI 505
+ + + A VF++M +V+TW MI G +A+ F M
Sbjct: 212 FVKGENSFENAYKVFDKMS-ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270
Query: 506 TFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR---QGQLQEAMDL 562
T SV +ACA + G +Q +S G+ VE S VD+ + G + + +
Sbjct: 271 TLSSVFSACAELENLSLG-KQLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKV 327
Query: 563 INSMPVKPDKAV--WGALL 579
+ M D +V W AL+
Sbjct: 328 FDRM---EDHSVMSWTALI 343
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 289/540 (53%), Gaps = 49/540 (9%)
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM--- 189
++ N +I Y K A K+FD+MPERN VS +A+++G +LNGD+ ++ F M
Sbjct: 42 ITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ 101
Query: 190 ---PECDSASLSALISGLVRNGELDMAA-GILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
P + S + GL+ E + G L+ G +V+ N+L+ Y + G
Sbjct: 102 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-----EMMVEVGNSLVDMYSKCG 156
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERD 305
++ EA ++F RI + R+++SWN+M+ +V G A + F M E +
Sbjct: 157 RINEAEKVFRRIVD-------------RSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 306 ---------------TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQI 350
C+ MI QI S PS ++ S++ + +
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF--HCPSSATIT-GSLVDLYVKC 260
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G L A+ F+++ +K +ISW+SLI GY + ++ A+ LF ++Q + D LSS++
Sbjct: 261 GYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSII 320
Query: 411 SVCTGLVDLYLGKQMHQLVTKTVIP---DLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
V L GKQM L K +P + + NS++ MY +CG + EA F EM+ K
Sbjct: 321 GVFADFALLRQGKQMQALAVK--LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL-K 377
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
DVI+W +I GY HGL ++ +F +M R I P + +++VL+AC+H+G+++EG F
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
+ ++ +GI+PRVEH+A VD+LGR G+L+EA LI++MP+KP+ +W LL CRVHG+
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+EL + + L+ ++ ++ YV++ N+Y W++ R L K +KK+ G SWV+
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 221/474 (46%), Gaps = 56/474 (11%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG- 113
A FDSM RN V+W+ L+SGHV ++ + LF EM ++ I S CG
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 114 SKFVEEGRKL--------FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
+E+G ++ F+ M E N+++ Y+K GR+++A K+F + +R+ +S
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVG----NSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPEC------DSASLSALI-----SGLVRNGELDMAA 214
NA+I GF+ G A+ F M E D +L++L+ +G++ G+
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK--QIH 233
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
G L+ G + +L+ Y + G + AR+ FD+I +
Sbjct: 234 GFLVRSGFHCPSSATIT---GSLVDLYVKCGYLFSARKAFDQIK-------------EKT 277
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASK--- 327
++SW+S+++ Y + G+ V A LF + E D+ A +++I + + + + +
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 337
Query: 328 LFKEMPSPDALS-WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG 386
L ++PS S NS++ + + G + A+ F M K++ISW +I GY K+ K
Sbjct: 338 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 387 AIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ--LVTKTVIPDLPINNSLI 444
++ +F +M +PD +VLS C+ + G+++ L T + P + ++
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 457
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRL 498
+ R G + EA + + M +V W ++ HG +EL K++ ++
Sbjct: 458 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG----DIELGKEVGKI 507
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 4/201 (1%)
Query: 328 LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGA 387
L K + ++ N +I + + + +A F+ MP++N++SW++L++G+ N D KG+
Sbjct: 32 LLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 91
Query: 388 IELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDL-PINNSLITM 446
+ LFS+M +G P+ T S+ L C L L G Q+H K + + NSL+ M
Sbjct: 92 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 447 YSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR--LKIHPTY 504
YS+CG I EA VF + + +I+WNAMI G+ G AL+ F M+ +K P
Sbjct: 152 YSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 505 ITFISVLNACAHAGLVEEGRR 525
T S+L AC+ G++ G++
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQ 231
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 48/357 (13%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN---LI 104
+ GR++EA F + R+ ++WN +I+G V +KA F M + +I +
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 105 ISGYFSCCGSKFVEEGRKLFDEMPER--DCVSWNTV----ISGYAKNGRMDQALKLFDAM 158
S +C + + G+++ + C S T+ + Y K G + A K FD +
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALIS-----GLVRNGE 209
E+ +S +++I G+ G+ A+G FKR+ E DS +LS++I L+R G+
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
A + L G N+++ Y + G V+EA + F +
Sbjct: 334 QMQALAVKLPSGLE-------TSVLNSVVDMYLKCGLVDEAEKCFAEMQ----------- 375
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEA 325
++V+SW ++ Y K G + +F M E D + ++S ++E
Sbjct: 376 --LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 326 SKLFKEM-----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIA 376
+LF ++ P + ++ + G LK AK + MP K N+ W +L++
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 126/266 (47%), Gaps = 34/266 (12%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM----PQRDIVSWN 102
++ G L AR FD +K + ++W++LI G+ + E +A LF + Q D + +
Sbjct: 258 VKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALS 317
Query: 103 LIISGYFSCCGSKFVEEGRKLFDEMPE-RDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
II + + ++ + L ++P + N+V+ Y K G +D+A K F M +
Sbjct: 318 SIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK 377
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM------PE--CDSASLSALI-SGLVRNGELDM 212
+ +S VITG+ +G +V F M P+ C A LSA SG+++ GE
Sbjct: 378 DVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELF 437
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
+ LLE G V+ Y ++ G++G+++EA+ L D +P +
Sbjct: 438 SK--LLE----THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMP------------IK 479
Query: 273 RNVVSWNSMM-MCYVKVGDIVSAREL 297
NV W +++ +C V GDI +E+
Sbjct: 480 PNVGIWQTLLSLCRVH-GDIELGKEV 504
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/614 (30%), Positives = 315/614 (51%), Gaps = 61/614 (9%)
Query: 83 IAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLF----------DEMP---- 128
+A AR FD + RD+ +WNL+ISGY S V LF P
Sbjct: 102 VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161
Query: 129 ---------ERDCVS------WNTVISG-----YAKNGRMDQALKLFDAMPERNAVSSNA 168
+ C++ W+ ++ Y++ + A LFD MP R+ S NA
Sbjct: 162 ACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNA 221
Query: 169 VITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKH 228
+I+G+ +G+ A+ + DS ++ +L+S G D G+ + G
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAG--DFNRGVTIHSYSIKHGLE 279
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKV 288
+ N LI Y + G++ + +++FDR+ + R+++SWNS++ Y
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRM-------------YVRDLISWNSIIKAYELN 326
Query: 289 GDIVSARELFDSMG----ERDTCAWNTMISGYVQISDME-----EASKLFKEMPSPDALS 339
+ A LF M + D ++ S Q+ D+ + L K D
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITI 386
Query: 340 WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
N+++ +A++G + A+ F +P ++ISWN++I+GY +N AIE+++ M+ EGE
Sbjct: 387 GNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 400 -KPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
++ T SVL C+ L G ++H +L+ + D+ + SL MY +CG + +A
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 458 TVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHA 517
++F ++ V WN +I + HG A+ LFK+M + P +ITF+++L+AC+H+
Sbjct: 507 SLFYQIPRVNSV-PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
Query: 518 GLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGA 577
GLV+EG+ F M DYGI P ++H+ VD+ GR GQL+ A+ I SM ++PD ++WGA
Sbjct: 566 GLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGA 625
Query: 578 LLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNV 637
LL +CRVHGNV+L ++A++ L +EPE G +VLL NMYA+ W+ + +R + K +
Sbjct: 626 LLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGL 685
Query: 638 KKQTGYSWVDSSNR 651
+K G+S ++ N+
Sbjct: 686 RKTPGWSSMEVDNK 699
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 227/491 (46%), Gaps = 46/491 (9%)
Query: 119 EGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGD 178
R + + + C+S +++ Y G + A FD + R+ + N +I+G+ G+
Sbjct: 74 HARLVVSKQIQNVCIS-AKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 179 VDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGK--HDLVQAYN- 235
+ F SL L SGL + +L C +G H L +
Sbjct: 133 SSEVIRCF---------SLFMLSSGL--TPDYRTFPSVLKACRTVIDGNKIHCLALKFGF 181
Query: 236 --------TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
+LI Y + V AR LFD +P R++ SWN+M+ Y +
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMP-------------VRDMGSWNAMISGYCQ 228
Query: 288 VGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL----FKEMPSPDALSWNSI 343
G+ A L + + D+ +++S + D + K + N +
Sbjct: 229 SGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
I +A+ G L+ + F+RM ++LISWNS+I Y+ NE AI LF +M+L +PD
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 404 HTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFN 461
TL S+ S+ + L D+ + + + + D+ I N+++ MY++ G + A VFN
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 462 EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRL-KIHPTYITFISVLNACAHAGLV 520
+ DVI+WN +I GYA +G A +A+E++ M+ +I T++SVL AC+ AG +
Sbjct: 409 WLP-NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 521 EEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
+G + ++ + G+ V S D+ G+ G+L++A+ L +P + + W L+
Sbjct: 468 RQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIA 525
Query: 581 SCRVHGNVELA 591
HG+ E A
Sbjct: 526 CHGFHGHGEKA 536
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 173/424 (40%), Gaps = 89/424 (20%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----Q 95
NK I GRL + + FD M R+ ++WN++I + + +A LF EM Q
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 96 RD---IVSWNLIIS--GYFSCCGS----------------------------KFVEEGRK 122
D ++S I+S G C S V+ R
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+F+ +P D +SWNT+ISGYA+NG +A+++++ M E +++N
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT------------ 453
Query: 183 VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
+ +P C A AL G+ +G L + G+ L+ V +L YG
Sbjct: 454 --WVSVLPACSQA--GALRQGMKLHGRL-LKNGLYLD-----------VFVVTSLADMYG 497
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD----IVSARELF 298
+ G++E+A LF +IP R N V WN+++ C+ G ++ +E+
Sbjct: 498 KCGRLEDALSLFYQIP-------------RVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 299 DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDL 353
D + D + T++S ++E F+ M +P + ++ + + G L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 354 KVAKDFFERMP-QKNLISWNSLIAGYDKNEDYK-GAIELFSQMQLEGEKPDRHTLSSVLS 411
+ A F + M Q + W +L++ + + G I ++E E H L S +
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 664
Query: 412 VCTG 415
G
Sbjct: 665 ASAG 668
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/606 (31%), Positives = 309/606 (50%), Gaps = 42/606 (6%)
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF----SCCGSKFVEEGRKLF 124
T+ L+ V R++ + L + + IV+ + +S +F S CG + R F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSL-HALYVKSIVASSTYLSNHFVNLYSKCGR--LSYARAAF 66
Query: 125 DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
E + S+N ++ YAK+ ++ A +LFD +P+ + VS N +I+G+ + +A+
Sbjct: 67 YSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 185 FFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG 240
FKRM E D +LS LI+ +L L C G N +
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQ----LHCFSVSGGFDSYSSVNNAFVTY 182
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
Y + G + EA +F G R+ VSWNSM++ Y + + A L+
Sbjct: 183 YSKGGLLREAVSVFY------------GMDELRDEVSWNSMIVAYGQHKEGAKALALYKE 230
Query: 301 MGERD--------TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGD 352
M + N + S I + KL K ++ + +I +++ G
Sbjct: 231 MIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG 290
Query: 353 LKVAKD---FFERMPQKNLISWNSLIAGYDKNEDY-KGAIELFSQMQLEGEKPDRHTLSS 408
D F+ + +L+ WN++I+GY NE+ + A++ F QMQ G +PD +
Sbjct: 291 CDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC 350
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTVIPD--LPINNSLITMYSRCGAIGEACTVFNEMKFY 466
V S C+ L KQ+H L K+ IP + +NN+LI++Y + G + +A VF+ M
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
+ +++N MI GYA HG +AL L+++M I P ITF++VL+ACAH G V+EG+
Sbjct: 411 -NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
FN+M + IEP EH++ +D+LGR G+L+EA I++MP KP W ALLG+CR H
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
Query: 587 NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
N+ LA+ AA L+ ++P ++ PYV+L NMYA+ W++ VR M K ++K+ G SW+
Sbjct: 530 NMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Query: 647 DSSNRQ 652
+ ++
Sbjct: 590 EVKKKK 595
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 182/422 (43%), Gaps = 105/422 (24%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ GRLS AR F S + N ++N ++ + K +I ARQLFDE+PQ D VS+N +ISG
Sbjct: 55 KCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG 114
Query: 108 YF----SCCGSKFVEEGRKL-------------------FDEMPERDCVSW--------- 135
Y + + RKL D + + C S
Sbjct: 115 YADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSS 174
Query: 136 --NTVISGYAKNGRMDQALKLFDAMPE-RNAVSSNAVITGFLLNGDVDSAVGFFKRMP-- 190
N ++ Y+K G + +A+ +F M E R+ VS N++I + + + A+ +K M
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 191 --ECDS----------ASLSALISGLVRNGEL---------DMAAGIL---LECGDGDEG 226
+ D SL LI G +G+L + +G++ +CG G +G
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG-GCDG 293
Query: 227 KHDLVQAY-----------NTLIAGYGQSGKV-EEARRLFDRI------PND-------- 260
+D + + NT+I+GY + ++ EEA + F ++ P+D
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 261 ------------QGDGKEDGRRFRRNVVSWNSMMMC-YVKVGDIVSARELFDSMGERDTC 307
Q G N +S N+ ++ Y K G++ AR +FD M E +
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAV 413
Query: 308 AWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
++N MI GY Q EA L++ M +P+ +++ +++S A G + +++F M
Sbjct: 414 SFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTM 473
Query: 364 PQ 365
+
Sbjct: 474 KE 475
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 210/746 (28%), Positives = 351/746 (47%), Gaps = 115/746 (15%)
Query: 18 CSRGLASFHKTNDNESSLLHQ--------WNKKISHLIRTGRLSEARTFFDSMKHRNTVT 69
C G +F + +L+Q N I R G + AR FD ++ ++ +
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 70 WNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMP 128
W +ISG K A+A +LF +M I+ S S C + +E G +L +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 129 E----RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
+ D N ++S Y G + A +F M +R+AV+ N +I G G + A+
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 185 FFKRMP----ECDSASLSALISGLVRNGEL------------------DMAAGILL---- 218
FKRM E DS +L++L+ +G L + G LL
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYA 435
Query: 219 ECGDGD-------EGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR------IPNDQ---- 261
+C D + E + + V +N ++ YG + + R+F + +PN
Sbjct: 436 KCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 262 --------GDGKEDGRRFRRNVVSWNSMMMCYV---------KVGDIVSARELFDSMGER 304
GD E G + ++ N + YV K+G + +A ++ +
Sbjct: 496 ILKTCIRLGD-LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK 554
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMP------------------------------- 333
D +W TMI+GY Q + ++A F++M
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 334 --------SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
S D N++++ +++ G ++ + FE+ + I+WN+L++G+ ++ + +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLI 444
A+ +F +M EG + T S + + ++ GKQ+H ++TKT + + N+LI
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 734
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
+MY++CG+I +A F E+ K+ ++WNA+I Y+ HG +AL+ F QM + P +
Sbjct: 735 SMYAKCGSISDAEKQFLEVS-TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
+T + VL+AC+H GLV++G F SM ++YG+ P+ EH+ VD+L R G L A + I
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 565 SMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDD 624
MP+KPD VW LL +C VH N+E+ + AA L+ LEPE S YVLL N+YA + WD
Sbjct: 854 EMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDA 913
Query: 625 AERVRVLMEEKNVKKQTGYSWVDSSN 650
+ R M+EK VKK+ G SW++ N
Sbjct: 914 RDLTRQKMKEKGVKKEPGQSWIEVKN 939
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 156/643 (24%), Positives = 267/643 (41%), Gaps = 110/643 (17%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
G L A FD M R TWN +I R I + LF M ++ SG
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 110 SCC--GS-----------------------------------KFVEEGRKLFDEMPERDC 132
C GS FV+ R++FD + +D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 133 VSWNTVISGYAKNGRMDQALKLF------DAMPERNAVSS-------------------- 166
SW +ISG +KN +A++LF MP A SS
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 167 -------------NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMA 213
NA+++ + G++ SA F M + D+ + + LI+GL + G + A
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 214 -------------------AGILLEC-GDGDEGKHDLVQAYNTLIAGYGQSGKVEEA-RR 252
A +++ C DG + + AY T + G+ + K+E A
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL-GFASNNKIEGALLN 432
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC----A 308
L+ + + + NVV WN M++ Y + D+ ++ +F M +
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 309 WNTMISGYVQISDMEEA----SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP 364
+ +++ +++ D+E S++ K +A + +I +A++G L A D R
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
K+++SW ++IAGY + A+ F QM G + D L++ +S C GL L G+Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 425 MH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+H Q DLP N+L+T+YSRCG I E+ F + + D I WNA++ G+ G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGFQQSG 671
Query: 484 LAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHF 543
+AL +F +M R I TF S + A + +++G +Q +++I G + E
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVC 730
Query: 544 ASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+ + + + G + +A + K ++ W A++ + HG
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTK-NEVSWNAIINAYSKHG 772
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 222/532 (41%), Gaps = 94/532 (17%)
Query: 94 PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDE-----MPERDCVSWNTVISGYAKNGRM 148
P + W ++ G GS ++EGRKL + + C+S + Y G +
Sbjct: 82 PNHQTLKW--LLEGCLKTNGS--LDEGRKLHSQILKLGLDSNGCLS-EKLFDFYLFKGDL 136
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG 208
A K+FD MPER + N +I + G F RM + SG+
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGV---- 192
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
LE G D+V+ + AR L+ QG
Sbjct: 193 ---------LEACRGGSVAFDVVEQIH--------------ARILY------QG------ 217
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
R + V N ++ Y + G + AR +FD + +D +W MISG + EA +L
Sbjct: 218 --LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 329 FKE------MPSPDALS---------------------------------WNSIISGFAQ 349
F + MP+P A S N+++S +
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
+G+L A+ F M Q++ +++N+LI G + + A+ELF +M L+G +PD +TL+S+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 410 LSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
+ C+ L+ G+Q+H TK + I +L+ +Y++C I A F E + ++
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEV-EN 454
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
V+ WN M+ Y ++ +F+QM+ +I P T+ S+L C G +E G Q +
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG-EQIH 513
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
S I + + +D+ + G+L A D++ K D W ++
Sbjct: 514 SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIA 564
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 398 GEKPDRHTLSSVLSVC---TGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAI 453
G +P+ TL +L C G +D G+++H + K + + ++ L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDE--GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 454 GEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNA 513
A VF+EM + + TWN MI AS L + LF +M + P TF VL A
Sbjct: 137 YGAFKVFDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA 195
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA 573
C + + Q ++ I G+ +D+ R G + A + + + +K D +
Sbjct: 196 CRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK-DHS 254
Query: 574 VWGALL 579
W A++
Sbjct: 255 SWVAMI 260
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 174/466 (37%), Positives = 265/466 (56%), Gaps = 25/466 (5%)
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
DSA+ S LI + N + G L+ G ++ N LI Y + + +A +
Sbjct: 60 DSATYSELIKCCISNRAVH--EGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQ 117
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC----- 307
LFD++P +RNV+SW +M+ Y K A EL M RD
Sbjct: 118 LFDQMP-------------QRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNVY 163
Query: 308 AWNTMISGYVQISDMEEA-SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
+++++ +SD+ + KE D +++I FA++G+ + A F+ M
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG 223
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
+ I WNS+I G+ +N A+ELF +M+ G ++ TL+SVL CTGL L LG Q H
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 427 QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAV 486
+ K DL +NN+L+ MY +CG++ +A VFN+MK +DVITW+ MI G A +G +
Sbjct: 284 VHIVK-YDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQ 341
Query: 487 DALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
+AL+LF++MK P YIT + VL AC+HAGL+E+G F SM YGI+P EH+
Sbjct: 342 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401
Query: 547 VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
+D+LG+ G+L +A+ L+N M +PD W LLG+CRV N+ LA+ AA+ +I+L+PE +
Sbjct: 402 IDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDA 461
Query: 607 GPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNRQ 652
G Y LL N+YAN + WD E +R M ++ +KK+ G SW++ N+Q
Sbjct: 462 GTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE-VNKQ 506
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 163/392 (41%), Gaps = 72/392 (18%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ ++ L++A FD M RN ++W T+IS + K + KA +L M RD V
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNV 158
Query: 100 SWNLII--SGYFSCCGSKFVEEGR-KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
N+ S SC G V + E E D + +I +AK G + AL +FD
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG------EL 210
M +A+ N++I GF N D A+ FKRM + A ++ ++R EL
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 278
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
M A + + D D + N L+ Y + G +E+A R+F+++
Sbjct: 279 GMQAHVHIVKYDQD------LILNNALVDMYCKCGSLEDALRVFNQMKE----------- 321
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFK 330
R+V++W +TMISG Q +EA KLF+
Sbjct: 322 --RDVITW-------------------------------STMISGLAQNGYSQEALKLFE 348
Query: 331 EMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-----WNSLIAGYDKN 381
M S P+ ++ ++ + G L+ +F M + I + +I K
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 382 EDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
A++L ++M+ E PD T ++L C
Sbjct: 409 GKLDDAVKLLNEMECE---PDAVTWRTLLGAC 437
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 175/551 (31%), Positives = 299/551 (54%), Gaps = 42/551 (7%)
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
V KLF ++PE D V WN +I G++K + ++L+ M + V+ ++ FLLN
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNML-KEGVTPDSHTFPFLLN 142
Query: 177 G-DVDSAVGFFKRMPECDSASL---------SALISGLVRNGELDMAAGILLECGDGDEG 226
G D + C +AL+ G +DMA G+ D
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVF------DRR 196
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV 286
+ V ++N +I+GY + + EE+ L + RN+VS S+ + V
Sbjct: 197 CKEDVFSWNLMISGYNRMKEYEESIELLVEM--------------ERNLVSPTSVTLLLV 242
Query: 287 -----KVGDIVSARELFDSMGERDTCAW----NTMISGYVQISDMEEASKLFKEMPSPDA 337
KV D + + + + E T N +++ Y +M+ A ++F+ M + D
Sbjct: 243 LSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDV 302
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
+SW SI+ G+ + G+LK+A+ +F++MP ++ ISW +I GY + + ++E+F +MQ
Sbjct: 303 ISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEA 456
G PD T+ SVL+ C L L +G+ + + K I D+ + N+LI MY +CG +A
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKA 422
Query: 457 CTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAH 516
VF++M +D TW AM+ G A++G +A+++F QM+ + I P IT++ VL+AC H
Sbjct: 423 QKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNH 481
Query: 517 AGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWG 576
+G+V++ R+ F M +D+ IEP + H+ VD+LGR G ++EA +++ MP+ P+ VWG
Sbjct: 482 SGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWG 541
Query: 577 ALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKN 636
ALLG+ R+H + +A++AA+ ++ LEP++ Y LL N+YA + W D VR + +
Sbjct: 542 ALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVA 601
Query: 637 VKKQTGYSWVD 647
+KK G+S ++
Sbjct: 602 IKKTPGFSLIE 612
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 195/440 (44%), Gaps = 53/440 (12%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN-----LI 104
G + AR FD + +WN +ISG+ + +E ++ +L EM +R++VS L+
Sbjct: 184 GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLV 242
Query: 105 ISGYFSCCGSKFVEEGRKLFDEMPERDCVS------WNTVISGYAKNGRMDQALKLFDAM 158
+S +C K + +++ + + E C + N +++ YA G MD A+++F +M
Sbjct: 243 LS---ACSKVKDKDLCKRVHEYVSE--CKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILL 218
R+ +S +++ G++ G++ A +F +MP D S + +I G +R G + + I
Sbjct: 298 KARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFR 357
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
E + +++ G +E + I D + + +VV
Sbjct: 358 EMQSAGMIPDEFTMV--SVLTACAHLGSLEIGEWIKTYI---------DKNKIKNDVVVG 406
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----S 334
N+++ Y K G A+++F M +RD W M+ G +EA K+F +M
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMP-----QKNLISWNSLIAGYDKNEDYKGAIE 389
PD +++ ++S G + A+ FF +M + +L+ + ++ + K A E
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSR 449
+ +M + P+ S V G L+ + M +L K ++ P N ++ +
Sbjct: 527 ILRKMPM---NPN----SIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL-- 577
Query: 450 CGAIGEACTVFNEMKFYKDV 469
C ++ K +KD+
Sbjct: 578 -------CNIYAGCKRWKDL 590
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 127/247 (51%), Gaps = 11/247 (4%)
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G + A F ++P+ +++ WN++I G+ K + + L+ M EG PD HT +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 411 SVCTGLV----DLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
+ GL L GK++H V K + +L + N+L+ MYS CG + A VF+ +
Sbjct: 142 N---GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RC 197
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
+DV +WN MI GY +++EL +M+R + PT +T + VL+AC+ + +R
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
+ +++ EP + + V+ G++ A+ + SM + D W +++
Sbjct: 258 -VHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVER 315
Query: 586 GNVELAQ 592
GN++LA+
Sbjct: 316 GNLKLAR 322
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 17/292 (5%)
Query: 15 RTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLI 74
+ LC R + + E SL + N ++ G + A F SMK R+ ++W +++
Sbjct: 252 KDLCKR-VHEYVSECKTEPSLRLE-NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 309
Query: 75 SGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEMPERDCV 133
G+V+R + AR FD+MP RD +SW ++I GY C ++ +E R++ D
Sbjct: 310 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 134 SWNTVISGYAKNGRMD--QALKLF-DAMPERN-AVSSNAVITGFLLNGDVDSAVGFFKRM 189
+ +V++ A G ++ + +K + D +N V NA+I + G + A F M
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Query: 190 PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
+ D + +A++ GL NG+ A + + D D+ Y +++ SG V++
Sbjct: 430 DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI--TYLGVLSACNHSGMVDQ 487
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
AR+ F ++ +D R ++V + M+ + G + A E+ M
Sbjct: 488 ARKFFAKMRSDH--------RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 10/229 (4%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W + + G L ART+FD M R+ ++W +I G+++ ++ ++F EM +
Sbjct: 305 WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGM 364
Query: 99 VSWNLIISGYFSCC---GSKFVEEGRKLF--DEMPERDCVSWNTVISGYAKNGRMDQALK 153
+ + + C GS + E K + + D V N +I Y K G ++A K
Sbjct: 365 IPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQK 424
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGE 209
+F M +R+ + A++ G NG A+ F +M + D + ++S +G
Sbjct: 425 VFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+D A + + LV Y ++ G++G V+EA + ++P
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVH-YGCMVDMLGRAGLVKEAYEILRKMP 532
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 205/665 (30%), Positives = 328/665 (49%), Gaps = 101/665 (15%)
Query: 70 WNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLI--ISGYFSCCGSKFVEEGRKLFDEM 127
+ +L++ + I+K + L + VS +++ +S ++ CG + RKLF+EM
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGH--ITYARKLFEEM 75
Query: 128 PERDCVSWNTVISGYAKNGRMDQALKLFDAM--------PE--------RNAVSSNAVIT 171
P+ +S+N VI Y + G A+ +F M P+ + A ++
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 172 GFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
G +++G + + +F R D +AL++ + G+++MA + D K+ V
Sbjct: 136 GLVVHGRILRS--WFGR----DKYVQNALLAMYMNFGKVEMARDVF------DVMKNRDV 183
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD-----------------GKEDGR----- 269
++NT+I+GY ++G + +A +FD + N+ D E GR
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 270 ----RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA 325
R + N+++ Y+K G + AR +FD M RD W MI+GY + D+E A
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 326 SKLFKEM------PSP-----------DALSWN----------------------SIISG 346
+L + M P+ DAL N S+IS
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISM 363
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+A+ + + F + + W+++IAG +NE A+ LF +M+ E +P+ TL
Sbjct: 364 YAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 407 SSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFN---E 462
+S+L L DL +H +TKT + L L+ +YS+CG + A +FN E
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEE 522
KDV+ W A+I GY HG +AL++F +M R + P ITF S LNAC+H+GLVEE
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
Query: 523 GRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSC 582
G F M+ Y R H+ VD+LGR G+L EA +LI ++P +P VWGALL +C
Sbjct: 544 GLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAAC 603
Query: 583 RVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTG 642
H NV+L ++AA L LEPE++G YVLL N+YA L W D E+VR +ME ++K+ G
Sbjct: 604 VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPG 663
Query: 643 YSWVD 647
+S ++
Sbjct: 664 HSTIE 668
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 211/468 (45%), Gaps = 42/468 (8%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N ++ + G++ AR FD MK+R+ ++WNT+ISG+ + + A +FD M +
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 100 SWNLIISGYFSCCGS-KFVEEGR---KLFDEMPERDCVSW-NTVISGYAKNGRMDQALKL 154
+ I CG K +E GR KL +E D + N +++ Y K GRMD+A +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGEL 210
FD M R+ ++ +I G+ +GDV++A+ + M ++ ++++L+S V L
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS--VCGDAL 333
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
+ G L + + + +LI+ Y + +V+ R+F G K
Sbjct: 334 KVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVF------SGASK----- 382
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDT----CAWNTMISGYVQISDMEEAS 326
+ W++++ V+ + A LF M D N+++ Y ++D+ +A
Sbjct: 383 --YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAM 440
Query: 327 KLFKE------MPSPDALSWNSIISGFAQIGDLKVAKDFF----ERMPQKNLISWNSLIA 376
+ M S DA + ++ +++ G L+ A F E+ K+++ W +LI+
Sbjct: 441 NIHCYLTKTGFMSSLDAAT--GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 377 GYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKTVI 434
GY + D A+++F +M G P+ T +S L+ C +GLV+ L L +
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
++ + R G + EA + + F W A++ +H
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 205/668 (30%), Positives = 320/668 (47%), Gaps = 105/668 (15%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
LH N + L ++GR+ EAR FD M R+ TWNT+I + R ++ A +LF P
Sbjct: 29 LHS-NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPV 87
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPE--------------RDCVSW------ 135
++ +SWN +ISGY C S E LF EM R C S
Sbjct: 88 KNTISWNALISGY---CKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 136 -------------------NTVISGYAKNGRMDQALKLFDAMP-ERNAVSSNAVITGFLL 175
N +++ YA+ R+ +A LF+ M E+N V+ +++TG+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 176 NGDVDSAVGFFKRM-PECDSASLSALISGLVRNGELDMA-AGILLECGDGDEGKHDLVQA 233
NG A+ F+ + E + ++ S L + G+ + C G +
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
+ LI Y + ++E AR L + + D +VVSWNSM++ V+ G I
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVD-------------DVVSWNSMIVGCVRQGLIGE 311
Query: 294 ARELFDSMGERDTCAWNTMISGYVQI-----SDMEEASK----LFKEMPSPDALSWNSII 344
A +F M ERD + I + ++M+ AS + K + L N+++
Sbjct: 312 ALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALV 371
Query: 345 SGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRH 404
+A+ G + A FE M +K++ISW +L+ G N Y A++LF M++ G PD+
Sbjct: 372 DMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKI 431
Query: 405 TLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEM 463
+SVLS L L G+Q+H K+ P L +NNSL+TMY++CG++ +A +FN M
Sbjct: 432 VTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM 491
Query: 464 KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
+ +D+ITW +I GYA +GL +E+
Sbjct: 492 EI-RDLITWTCLIVGYAKNGL-----------------------------------LEDA 515
Query: 524 RRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCR 583
+R F+SM YGI P EH+A +D+ GR G + L++ M V+PD VW A+L + R
Sbjct: 516 QRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASR 575
Query: 584 VHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGY 643
HGN+E + AA+ L+ LEP ++ PYV L NMY+ D+A VR LM+ +N+ K+ G
Sbjct: 576 KHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGC 635
Query: 644 SWVDSSNR 651
SWV+ +
Sbjct: 636 SWVEEKGK 643
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 300 SMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDF 359
S +R N ++ + ++EA ++F +MP D +WN++I ++ L A+
Sbjct: 22 SYADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKL 81
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
F P KN ISWN+LI+GY K+ A LF +MQ +G KP+ +TL SVL +CT LV L
Sbjct: 82 FRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLL 141
Query: 420 YLGKQMHQLVTKTVIPDLPIN--NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
G+Q+H KT DL +N N L+ MY++C I EA +F M+ K+ +TW +M+
Sbjct: 142 LRGEQIHGHTIKTGF-DLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 478 GYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIE 537
GY+ +G A A+E F+ ++R TF SVL ACA G Q + I G +
Sbjct: 201 GYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG-VQVHCCIVKSGFK 259
Query: 538 PRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+ ++ +D+ + +++ A L+ M V D W +++ C G
Sbjct: 260 TNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQG 307
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 260/529 (49%), Gaps = 73/529 (13%)
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
R+L PE D +NT++ GY+++ ++ +F M + V ++ F++
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK--- 114
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
AV F+ + G + C G + TLI
Sbjct: 115 --AVENFR-----------------------SLRTGFQMHCQALKHGLESHLFVGTTLIG 149
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
YG G VE AR++FD + + N+V+WN+++ + D+ ARE+FD
Sbjct: 150 MYGGCGCVEFARKVFDEM-------------HQPNLVAWNAVITACFRGNDVAGAREIFD 196
Query: 300 SMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDF 359
M R+ +WN M++GY++ ++E A ++F EMP D +SW+++I G A G
Sbjct: 197 KMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF------ 250
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
NE + F ++Q G P+ +L+ VLS C+
Sbjct: 251 ---------------------NESFL----YFRELQRAGMSPNEVSLTGVLSACSQSGSF 285
Query: 420 YLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
GK +H V K + +NN+LI MYSRCG + A VF M+ + +++W +MI G
Sbjct: 286 EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAG 345
Query: 479 YASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEP 538
A HG +A+ LF +M + P I+FIS+L+AC+HAGL+EEG F+ M Y IEP
Sbjct: 346 LAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEP 405
Query: 539 RVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQAL 598
+EH+ VD+ GR G+LQ+A D I MP+ P VW LLG+C HGN+ELA+ Q L
Sbjct: 406 EIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL 465
Query: 599 ISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
L+P +SG VLL N YA W D +R M + +KK T +S V+
Sbjct: 466 NELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 157/356 (44%), Gaps = 58/356 (16%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
G + AR FD M N V WN +I+ + ++A AR++FD+M R+ SWN++++GY
Sbjct: 155 GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 110 SCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAV 169
+ +E +++F EMP RD VSW+T+I G A NG +++ F + +R +S N V
Sbjct: 215 K---AGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL-QRAGMSPNEV 270
Query: 170 ITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
SL+ ++S ++G + G +L G
Sbjct: 271 --------------------------SLTGVLSACSQSGSFEF--GKILHGFVEKAGYSW 302
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
+V N LI Y + G V AR +F +G + +R +VSW SM+ G
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVF------------EGMQEKRCIVSWTSMIAGLAMHG 350
Query: 290 DIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP-----SPDALSW 340
A LF+ M D ++ +++ +EE F EM P+ +
Sbjct: 351 QGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY 410
Query: 341 NSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
++ + + G L+ A DF +MP I W +L+ + G IEL Q++
Sbjct: 411 GCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH----GNIELAEQVK 462
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 158/332 (47%), Gaps = 28/332 (8%)
Query: 107 GYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
G + CG VE RK+FDEM + + V+WN VI+ + + A ++FD M RN S
Sbjct: 149 GMYGGCGC--VEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSW 206
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEG 226
N ++ G++ G+++SA F MP D S S +I G+ NG + + E
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMM-CY 285
+++ + +++ QSG E + L G ++ G + +VS N+ ++ Y
Sbjct: 267 PNEV--SLTGVLSACSQSGSFEFGKIL-------HGFVEKAGYSW---IVSVNNALIDMY 314
Query: 286 VKVGDIVSARELFDSMGE-RDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSW 340
+ G++ AR +F+ M E R +W +MI+G EEA +LF EM +PD +S+
Sbjct: 315 SRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISF 374
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLIS-----WNSLIAGYDKNEDYKGAIELFSQMQ 395
S++ + G ++ +D+F M + I + ++ Y ++ + A + QM
Sbjct: 375 ISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMP 434
Query: 396 LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ 427
+ P ++L C+ ++ L +Q+ Q
Sbjct: 435 I---PPTAIVWRTLLGACSSHGNIELAEQVKQ 463
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 58/272 (21%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
L WN I+ R ++ AR FD M RN +WN +++G++K E+ A+++F EMP
Sbjct: 172 LVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH 231
Query: 96 RDIVSWNLIISG------------YF-------------------SCCGSKFVEEGRKLF 124
RD VSW+ +I G YF S C E K+
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 125 DEMPERDCVSW-----NTVISGYAKNGRMDQALKLFDAMPE-RNAVSSNAVITGFLLNGD 178
E+ SW N +I Y++ G + A +F+ M E R VS ++I G ++G
Sbjct: 292 HGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
Query: 179 VDSAVGFFKRMPEC----DSASLSALI-----SGLVRNGE---LDMAAGILLECGDGDEG 226
+ AV F M D S +L+ +GL+ GE +M +E
Sbjct: 352 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE------- 404
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
++ Y ++ YG+SGK+++A ++P
Sbjct: 405 --PEIEHYGCMVDLYGRSGKLQKAYDFICQMP 434
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 290/544 (53%), Gaps = 57/544 (10%)
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
R++FD++P WN +I GY++N AL ++ M + VS ++ LL
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNM-QLARVSPDSFTFPHLLKA-- 128
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG-DGDEGKHDLVQAYNTLI 238
+ LS L G + ++ G D D V N LI
Sbjct: 129 --------------CSGLSHLQMGRFVHAQV-------FRLGFDAD------VFVQNGLI 161
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
A Y + ++ AR +F+ +P + R +VSW +++ Y + G+ + A E+F
Sbjct: 162 ALYAKCRRLGSARTVFEGLPLPE-----------RTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 299 DSMGERDT----CAWNTMISGYVQISDMEEASKLFKEMPS------PDALSWNSIISGFA 348
M + D A ++++ + + D+++ + + PD L S+ + +A
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYA 268
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ G + AK F++M NLI WN++I+GY KN + AI++F +M + +PD +++S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
+S C + L + M++ V ++ D+ I+++LI M+++CG++ A VF+ +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR-TLDR 387
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
DV+ W+AMI GY HG A +A+ L++ M+R +HP +TF+ +L AC H+G+V EG F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
N M D+ I P+ +H+A +D+LGR G L +A ++I MPV+P VWGALL +C+ H +
Sbjct: 448 NRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
VEL + AAQ L S++P ++G YV L N+YA LWD VRV M+EK + K G SWV+
Sbjct: 507 VELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Query: 648 SSNR 651
R
Sbjct: 567 VRGR 570
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 131/239 (54%), Gaps = 4/239 (1%)
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
+I + GD+ A+ F+ +P+ + WN++I GY +N ++ A+ ++S MQL PD
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPD 118
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFN 461
T +L C+GL L +G+ +H V + D+ + N LI +Y++C +G A TVF
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFE 178
Query: 462 EMKF-YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV 520
+ + +++W A++ YA +G ++ALE+F QM+++ + P ++ +SVLNA +
Sbjct: 179 GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDL 238
Query: 521 EEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
++GR S++ G+E + S + + GQ+ A L + M P+ +W A++
Sbjct: 239 KQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 204/463 (44%), Gaps = 55/463 (11%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
G ++ AR FD + WN +I G+ + A ++ M + +
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 110 -SCCGSKFVEEGR----KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDA--MPERN 162
+C G ++ GR ++F + D N +I+ YAK R+ A +F+ +PER
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPECD-SASLSALISGL--------VRNGELDMA 213
VS A+++ + NG+ A+ F +M + D AL+S L ++ G A
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
+ + + G E + DL+ + NT+ Y + G+V A+ LFD++ +
Sbjct: 247 SVVKM----GLEIEPDLLISLNTM---YAKCGQVATAKILFDKMKSP------------- 286
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLF 329
N++ WN+M+ Y K G A ++F M + DT + + IS Q+ +E+A ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 330 KEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
+ + D +++I FA+ G ++ A+ F+R ++++ W+++I GY + +
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQ----MHQLVTKTVIPDLPI 439
AI L+ M+ G P+ T +L C +G+V ++ +++ + P
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV-----REGWWFFNRMADHKINPQQQH 461
Query: 440 NNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
+I + R G + +A V M V W A++ H
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 125/307 (40%), Gaps = 80/307 (26%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNL 103
+ G+++ A+ FD MK N + WN +ISG+ K +A +F EM +D+ +S
Sbjct: 269 KCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITS 328
Query: 104 IISG----------------------------------YFSCCGSKFVEEGRKLFDEMPE 129
IS F+ CGS VE R +FD +
Sbjct: 329 AISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGS--VEGARLVFDRTLD 386
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAV-ITGFLL----NGDVDSAVG 184
RD V W+ +I GY +GR +A+ L+ AM ER V N V G L+ +G V
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 185 FFKRMPE----CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG 240
FF RM + + +I L R G LD A + ++C G V + L++
Sbjct: 446 FFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV-IKCMPVQPG----VTVWGALLSA 500
Query: 241 YGQSGKVE----EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
+ VE A++LF P++ G YV++ ++ +A
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGH---------------------YVQLSNLYAAAR 539
Query: 297 LFDSMGE 303
L+D + E
Sbjct: 540 LWDRVAE 546
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 284/517 (54%), Gaps = 42/517 (8%)
Query: 146 GRMDQALKLFDAMPERNAVSS-NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGL 204
GR+DQ F +P AVS +A+ G L+G FK CD + +
Sbjct: 107 GRLDQ----FSFLPILKAVSKVSALFEGMELHGVA------FKIATLCDPFVETGFMDMY 156
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
G ++ A + DE H V +NT+I Y + G V+EA +LF+ + +
Sbjct: 157 ASCGRINYARNVF------DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN--- 207
Query: 265 KEDGRRFRRNVVSWNSMMMCYV-----KVGDIVSARELFDSMGERD----TCAWNTMISG 315
V + M++C + + G++ R +++ + E D T +++
Sbjct: 208 -----------VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 316 YVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLI 375
Y M+ A + F++M + +++SG+++ G L A+ F++ +K+L+ W ++I
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 376 AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV-TKTVI 434
+ Y +++ + A+ +F +M G KPD ++ SV+S C L L K +H + +
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
+L INN+LI MY++CG + VF +M ++V++W++MI + HG A DAL LF +
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFAR 435
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
MK+ + P +TF+ VL C+H+GLVEEG++ F SM ++Y I P++EH+ VD+ GR
Sbjct: 436 MKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 555 QLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
L+EA+++I SMPV + +WG+L+ +CR+HG +EL + AA+ ++ LEP+ G VL+ N
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSN 555
Query: 615 MYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+YA + W+D +R +MEEKNV K+ G S +D + +
Sbjct: 556 IYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGK 592
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 181/415 (43%), Gaps = 76/415 (18%)
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASL 197
YA GR++ A +FD M R+ V+ N +I + G VD A F+ M + D L
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 198 SALISGLVRNGELDMAAGI---LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
++S R G + I L+E D H L L+ Y +G ++ AR F
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIE-NDVRMDTHLL----TALVTMYAGAGCMDMAREFF 270
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
++ RN+ +M+ Y K G + A+ +FD ++D W TMIS
Sbjct: 271 RKMS-------------VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 315 GYVQISDMEEASKLFKEMP----SPDALSWNSIISG------------------------ 346
YV+ +EA ++F+EM PD +S S+IS
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLES 377
Query: 347 -----------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
+A+ G L +D FE+MP++N++SW+S+I + + A+ LF++M+
Sbjct: 378 ELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMK 437
Query: 396 LEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCG 451
E +P+ T VL C +GLV+ GK++ +T + P L ++ ++ R
Sbjct: 438 QENVEPNEVTFVGVLYGCSHSGLVE--EGKKIFASMTDEYNITPKLEHYGCMVDLFGRAN 495
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALEL--FKQMKRLKIHPTY 504
+ EA V M +V+ W +++ HG LEL F + L++ P +
Sbjct: 496 LLREALEVIESMPVASNVVIWGSLMSACRIHG----ELELGKFAAKRILELEPDH 546
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 164/378 (43%), Gaps = 65/378 (17%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
GR++ AR FD M HR+ VTWNT+I + + + +A +LF+EM +++ +I+
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 110 SCCGS-----------KFVEE-------------------------GRKLFDEMPERDCV 133
S CG +F+ E R+ F +M R+
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 134 SWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP--- 190
++SGY+K GR+D A +FD +++ V +I+ ++ + A+ F+ M
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 191 -ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
+ D S+ ++IS G LD A + C + G + N LI Y + G ++
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWV-HSCIHVN-GLESELSINNALINMYAKCGGLDA 397
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERD 305
R +F+++P RRNVVSW+SM+ G+ A LF M E +
Sbjct: 398 TRDVFEKMP-------------RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFF 360
+ ++ G +EE K+F M +P + ++ F + L+ A +
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 361 ERMP-QKNLISWNSLIAG 377
E MP N++ W SL++
Sbjct: 505 ESMPVASNVVIWGSLMSA 522
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 116/252 (46%), Gaps = 28/252 (11%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----QRDI 98
+S + GRL +A+ FD + ++ V W T+IS +V+ +A ++F+EM + D+
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKL 154
VS +IS +C +++ + + + E + N +I+ YAK G +D +
Sbjct: 345 VSMFSVIS---ACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGEL 210
F+ MP RN VS +++I ++G+ A+ F RM E + + ++ G +G +
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
+ I D L + Y ++ +G++ + EA + + +P
Sbjct: 462 EEGKKIFASMTDEYNITPKL-EHYGCMVDLFGRANLLREALEVIESMP------------ 508
Query: 271 FRRNVVSWNSMM 282
NVV W S+M
Sbjct: 509 VASNVVIWGSLM 520
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ + G L R F+ M RN V+W+++I+ E + A LF M Q ++
Sbjct: 383 NALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE 442
Query: 100 SWNLIISG-YFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRMDQALK 153
+ G + C S VEEG+K+F M + ++ + ++ + + + +AL+
Sbjct: 443 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALE 502
Query: 154 LFDAMPERNAVSSNAVITGFLLNG 177
+ ++MP V+SN VI G L++
Sbjct: 503 VIESMP----VASNVVIWGSLMSA 522
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 240/420 (57%), Gaps = 28/420 (6%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
+ + YG+ + AR++F +P RN VSW ++++ YVK G++ A
Sbjct: 149 TSFVDFYGKCKDLFSARKVFGEMPE-------------RNAVSWTALVVAYVKSGELEEA 195
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
+ +FD M ER+ +WN ++ G V+ D+ A KLF EMP D +S+ S+I G+A+ GD+
Sbjct: 196 KSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMV 255
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
A+D FE ++ +W++LI GY +N A ++FS+M + KPD + ++S C+
Sbjct: 256 SARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACS 315
Query: 415 GL--------VDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFY 466
+ VD YL ++M++ + V+P +LI M ++CG + A +F EM
Sbjct: 316 QMGCFELCEKVDSYLHQRMNKFSSHYVVP------ALIDMNAKCGHMDRAAKLFEEMP-Q 368
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
+D++++ +M+ G A HG +A+ LF++M I P + F +L C + LVEEG R
Sbjct: 369 RDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRY 428
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
F M Y I +H++ V++L R G+L+EA +LI SMP + + WG+LLG C +HG
Sbjct: 429 FELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
Query: 587 NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
N E+A+V A+ L LEP+S+G YVLL N+YA L+ W D +R M E + K G SW+
Sbjct: 489 NTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 178/399 (44%), Gaps = 64/399 (16%)
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
+D+V + Y C K + RK+F EMPER+ VSW ++ Y K+G +++A +F
Sbjct: 143 KDVVVGTSFVDFYGKC---KDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
D MPERN S NA++ G + +GD+ +A F MP+ D S +++I G + G++ A
Sbjct: 200 DLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARD 259
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
+ E D V+A++ LI GY Q+G+ EA ++F + E +
Sbjct: 260 LFEEARGVD------VRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE---FIMVGL 310
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYV---------QISDMEEAS 326
+S S M C+ EL + + N S YV + M+ A+
Sbjct: 311 MSACSQMGCF----------ELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAA 360
Query: 327 KLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG 386
KLF+EMP D +S+ S++ G A G G +
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHG------------------------CGSE------- 389
Query: 387 AIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDLPINNSLI 444
AI LF +M EG PD + +L VC + G + +L+ K +++ + ++
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIV 449
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+ SR G + EA + M F W +++GG + HG
Sbjct: 450 NLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 165/344 (47%), Gaps = 33/344 (9%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W + +++G L EA++ FD M RN +WN L+ G VK ++ A++LFDEMP+RDI
Sbjct: 179 WTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
+S+ +I GY G V R LF+E D +W+ +I GYA+NG+ ++A K+F M
Sbjct: 239 ISYTSMIDGYAK--GGDMV-SARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS------------ASLSALISGLVR 206
+N ++ G + S +G F+ + DS + ALI +
Sbjct: 296 CAKNVKPDEFIMVGLM---SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
G +D AA + E + DLV +Y +++ G G EA RLF+++ ++ E
Sbjct: 353 CGHMDRAAKLFEEM-----PQRDLV-SYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDE 406
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
V + ++ ++ +++ + + + +C N + + ++EA
Sbjct: 407 VAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLL----SRTGKLKEAY 462
Query: 327 KLFKEMP-SPDALSWNSIISGFAQIGDLK----VAKDFFERMPQ 365
+L K MP A +W S++ G + G+ + VA+ FE PQ
Sbjct: 463 ELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQ 506
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 197/693 (28%), Positives = 331/693 (47%), Gaps = 91/693 (13%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKA----R 87
++ WN I + G EA F+ ++ + T+ ++I +
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 88 QLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGR 147
Q+ D + D+ N ++ Y S G + R++FDEMP RD VSWN++ISGY+ +G
Sbjct: 131 QILDMGFESDLFVGNALVDMY-SRMG--LLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 148 MDQALKLFDAM------PERNAVSSNAVITGFLLNGDVDSAV-GF-FKRMPECDSASLSA 199
++AL+++ + P+ VSS G LL + GF K +
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 200 LISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF----D 255
L++ ++ A + E D +YNT+I GY + VEE+ R+F D
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDS------VSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 256 RIPND--------QGDGKEDGRRFRRNVVSW-------------NSMMMCYVKVGDIVSA 294
+ D + G + + ++ N ++ Y K GD+++A
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA 361
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQI 350
R++F+SM +DT +WN++ISGY+Q D+ EA KLFK M D +++ +IS ++
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 351 GDLKVAK-----------------------------------DFFERMPQKNLISWNSLI 375
DLK K F M + ++WN++I
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 376 AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK-TVI 434
+ + D+ +++ +QM+ PD T L +C L LGK++H + +
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE 541
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
+L I N+LI MYS+CG + + VF M +DV+TW MI Y +G ALE F
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFAD 600
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
M++ I P + FI+++ AC+H+GLV+EG F M Y I+P +EH+A VD+L R
Sbjct: 601 MEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQ 660
Query: 555 QLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
++ +A + I +MP+KPD ++W ++L +CR G++E A+ ++ +I L P+ G +L N
Sbjct: 661 KISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASN 720
Query: 615 MYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
YA L WD +R +++K++ K GYSW++
Sbjct: 721 AYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 179/359 (49%), Gaps = 18/359 (5%)
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKL 328
+NV WNS++ + K G A E + + E D + ++I + D E +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 329 FKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDY 384
++++ D N+++ ++++G L A+ F+ MP ++L+SWNSLI+GY + Y
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 385 KGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK-TVIPDLPINNSL 443
+ A+E++ +++ PD T+SSVL L+ + G+ +H K V + +NN L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF-KQMKRLKIHP 502
+ MY + +A VF+EM +D +++N MI GY + +++ +F + + + K P
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDV-RDSVSYNTMICGYLKLEMVEESVRMFLENLDQFK--P 305
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMIN-DYGIEPRVEHFASFVDILGRQGQLQEAMD 561
+T SVL AC H + + +N M+ + +E V + +D+ + G + A D
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITARD 363
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG-PYVLLYNMYANL 619
+ NSM K D W +++ G++ A + ++ +E ++ Y++L ++ L
Sbjct: 364 VFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 343 IISGFAQIGDLKVAKDFFERM-PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
+I ++ + + F R+ P KN+ WNS+I + KN + A+E + +++ P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 402 DRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVF 460
D++T SV+ C GL D +G ++ Q++ DL + N+L+ MYSR G + A VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV 520
+EM +D+++WN++I GY+SHG +ALE++ ++K I P T SVL A + +V
Sbjct: 165 DEMPV-RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 521 EEGR 524
++G+
Sbjct: 224 KQGQ 227
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 439 INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRL 498
+ LI YS + +VF + K+V WN++I ++ +GL +ALE + +++
Sbjct: 41 FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRES 100
Query: 499 KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQE 558
K+ P TF SV+ ACA E G + ++ D G E + + VD+ R G L
Sbjct: 101 KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 559 AMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
A + + MPV+ D W +L+ HG E A
Sbjct: 160 ARQVFDEMPVR-DLVSWNSLISGYSSHGYYEEA 191
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 301/554 (54%), Gaps = 40/554 (7%)
Query: 114 SKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGF 173
S++++ K+ + + SWN I G++++ ++ L+ M S
Sbjct: 100 SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRP----- 154
Query: 174 LLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGI-------LLECGDGDEG 226
D + FK + +SL +I G V L++ + + CGD +
Sbjct: 155 ----DHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENA 210
Query: 227 K--------HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
+ DLV ++N LI GY + G+ E+A ++ ++ +G +D +VS
Sbjct: 211 RKVFDESPVRDLV-SWNCLINGYKKIGEAEKAIYVY-KLMESEGVKPDDVTMI--GLVSS 266
Query: 279 NSMMMCYVKVGDIVSARELFDSMGE---RDTCAW-NTMISGYVQISDMEEASKLFKEMPS 334
SM+ GD+ +E ++ + E R T N ++ + + D+ EA ++F +
Sbjct: 267 CSML------GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
+SW ++ISG+A+ G L V++ F+ M +K+++ WN++I G + + + A+ LF +M
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 395 QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAI 453
Q KPD T+ LS C+ L L +G +H+ + K + ++ + SL+ MY++CG I
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 454 GEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNA 513
EA +VF+ ++ ++ +T+ A+IGG A HG A A+ F +M I P ITFI +L+A
Sbjct: 441 SEALSVFHGIQ-TRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA 573
C H G+++ GR F+ M + + + P+++H++ VD+LGR G L+EA L+ SMP++ D A
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 574 VWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLME 633
VWGALL CR+HGNVEL + AA+ L+ L+P SG YVLL MY +W+DA+R R +M
Sbjct: 560 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 634 EKNVKKQTGYSWVD 647
E+ V+K G S ++
Sbjct: 620 ERGVEKIPGCSSIE 633
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 145/374 (38%), Gaps = 90/374 (24%)
Query: 37 HQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR 96
H N I G + AR FD R+ V+WN LI+G+ K E KA ++ M
Sbjct: 192 HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESE 251
Query: 97 DIVSWNLIISGYFSCC--------GSKFVE----------------------------EG 120
+ ++ + G S C G +F E E
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
R++FD + +R VSW T+ISGYA+ G +D + KLFD M E++ V NA+I G +
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 181 SAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT 236
A+ F+ M + D ++ +S + G LD+ I H ++ Y+
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWI-----------HRYIEKYSL 420
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
+ NV S++ Y K G+I A
Sbjct: 421 SL-----------------------------------NVALGTSLVDMYAKCGNISEALS 445
Query: 297 LFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGD 352
+F + R++ + +I G D A F EM +PD +++ ++S G
Sbjct: 446 VFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGM 505
Query: 353 LKVAKDFFERMPQK 366
++ +D+F +M +
Sbjct: 506 IQTGRDYFSQMKSR 519
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 119/257 (46%), Gaps = 53/257 (20%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G + EAR FD+++ R V+W T+ISG+ + + +R+LFD+M ++D+V WN +I G
Sbjct: 304 KCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 108 YFSCCGSKFVEEGRKLFDEMPERD----------CVS------------W---------- 135
+K ++ LF EM + C+S W
Sbjct: 364 SVQ---AKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL 420
Query: 136 -------NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
+++ YAK G + +AL +F + RN+++ A+I G L+GD +A+ +F
Sbjct: 421 SLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNE 480
Query: 189 MPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL---VQAYNTLIAGY 241
M + D + L+S G + + + + +L ++ Y+ ++
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQM----KSRFNLNPQLKHYSIMVDLL 536
Query: 242 GQSGKVEEARRLFDRIP 258
G++G +EEA RL + +P
Sbjct: 537 GRAGLLEEADRLMESMP 553
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 300/541 (55%), Gaps = 34/541 (6%)
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
+++ D SW ++ +++ + + + ++ M S+ +T L
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVL------ 111
Query: 181 SAVGFFKRMPECDSASLSALISGL-----VRNGELDMAAGI----LLECGDGDEGKHDLV 231
A G + M + AL +GL V+ G + + + + L + D + + V
Sbjct: 112 RACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTV 171
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDI 291
++N+L+ GY +SG+++EARR+FD+IP ++ VSWN ++ Y K GD+
Sbjct: 172 -SWNSLLHGYLESGELDEARRVFDKIP-------------EKDAVSWNLIISSYAKKGDM 217
Query: 292 VSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIG 351
+A LF +M + +WN +I GYV +M+ A F MP + +SW ++ISG+ ++G
Sbjct: 218 GNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLG 277
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE--KPDRHTLSSV 409
D++ A++ F M +K+ + ++++IA Y +N K A++LF+QM +PD TLSSV
Sbjct: 278 DVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSV 337
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
+S + L + G + +T+ I D ++ SLI +Y + G +A +F+ + KD
Sbjct: 338 VSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKD 396
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
++++AMI G +G+A +A LF M KI P +TF +L+A +H+GLV+EG + FN
Sbjct: 397 TVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFN 456
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
SM D+ +EP +H+ VD+LGR G+L+EA +LI SMP++P+ VWGALL + +H NV
Sbjct: 457 SM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNV 515
Query: 589 ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
E ++A + LE + +G L +Y+++ WDDA VR ++EK + K G SWV+
Sbjct: 516 EFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVEG 575
Query: 649 S 649
S
Sbjct: 576 S 576
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 178/395 (45%), Gaps = 70/395 (17%)
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
++E +K FD++ E++ VSWN+++ GY ++G +D+A ++FD +PE++AVS N +I+ +
Sbjct: 154 YIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAK 213
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
GD+ +A F MP AS + LI G V E+ +
Sbjct: 214 KGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKL----------------------- 250
Query: 236 TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
AR FD +P G VSW +M+ Y K+GD+ SA
Sbjct: 251 --------------ARTYFDAMPQKNG-------------VSWITMISGYTKLGDVQSAE 283
Query: 296 ELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM------PSPDALSWNSIISGFAQ 349
ELF M ++D ++ MI+ Y Q ++A KLF +M PD ++ +S++S +Q
Sbjct: 284 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 350 IGDLK----VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+G+ V E + + + SLI Y K D+ A ++FS + K D +
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN----KKDTVS 399
Query: 406 LSSVLSVC--TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM 463
S+++ C G+ ++ K + P++ L++ YS G + E FN M
Sbjct: 400 YSAMIMGCGINGMAT-EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM 458
Query: 464 KFYK---DVITWNAMIGGYASHGLAVDALELFKQM 495
K + + M+ G +A EL K M
Sbjct: 459 KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 166/328 (50%), Gaps = 22/328 (6%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
R G + A+ FD + +NTV+WN+L+ G+++ E+ +AR++FD++P++D VSWNLIIS
Sbjct: 151 RLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISS 210
Query: 108 YFSCCGSKFVEEGR--KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
Y +K + G LF MP + SWN +I GY M A FDAMP++N VS
Sbjct: 211 Y-----AKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVS 265
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDE 225
+I+G+ GDV SA F+ M + D A+I+ +NG+ A + + + +
Sbjct: 266 WITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNS 325
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
+++++ Q G + I + G +D + S++ Y
Sbjct: 326 YIQPDEITLSSVVSANSQLGNTSFGTWVESYI-TEHGIKIDD--------LLSTSLIDLY 376
Query: 286 VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLF-----KEMPSPDALSW 340
+K GD A ++F ++ ++DT +++ MI G EA+ LF K++P P+ +++
Sbjct: 377 MKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP-PNVVTF 435
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNL 368
++S ++ G ++ F M NL
Sbjct: 436 TGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 183/379 (48%), Gaps = 42/379 (11%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN + + +G L EAR FD + ++ V+WN +IS + K+ ++ A LF MP +
Sbjct: 173 WNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSP 232
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
SWN++I GY +C + ++ R FD MP+++ VSW T+ISGY K G + A +LF M
Sbjct: 233 ASWNILIGGYVNC---REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLM 289
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE------CDSASLSALISGLVRNGEL-D 211
+++ + +A+I + NG A+ F +M E D +LS+++S N +L +
Sbjct: 290 SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA---NSQLGN 346
Query: 212 MAAGILLECGDGDEGKH--DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
+ G +E + G DL+ +LI Y + G +A ++F +
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLST--SLIDLYMKGGDFAKAFKMFSNLN----------- 393
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEA 325
+++ VS+++M+M G A LF +M E+ + + ++S Y ++E
Sbjct: 394 --KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEG 451
Query: 326 SKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLI--AGY 378
K F M P A + ++ + G L+ A + + MP Q N W +L+ +G
Sbjct: 452 YKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGL 511
Query: 379 DKNEDYKGAIELFSQMQLE 397
N ++ G I ++LE
Sbjct: 512 HNNVEF-GEIACSHCVKLE 529
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 208/676 (30%), Positives = 337/676 (49%), Gaps = 88/676 (13%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKR---REIAKARQL------- 89
K +S + G +++AR FDSM+ RN TW+ +I + + RE+AK +L
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 90 -----FDEMPQR-----DIVSWNLIIS-----GYFSC-------------CGSKFVEEGR 121
F ++ Q D+ + +I S G SC CG ++
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE--LDFAT 236
Query: 122 KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNA----VSSNAVITGFLLNG 177
K F M ERD ++WN+V+ Y +NG+ ++A++L M + V+ N +I G+ G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 178 DVDSAVGFFKRMPE----CDSASLSALISGLVRNG----ELDMAAGILLECGDGDEGKHD 229
D+A+ ++M D + +A+ISGL+ NG LDM + L
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA---------G 347
Query: 230 LVQAYNTLIAGYGQSG--KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
+V T+++ KV I G F +V+ NS++ Y K
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG--------FIDDVLVGNSLVDMYSK 399
Query: 288 VGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSI 343
G + AR++FDS+ +D WN+MI+GY Q +A +LF M P+ ++WN++
Sbjct: 400 CGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 344 ISGFAQIGDLKVAKDFFERMP-----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
ISG+ + GD A D F+RM Q+N +WN +IAGY +N A+ELF +MQ
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 399 EKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDL-PINNSLITMYSRCGAIGEAC 457
P+ T+ S+L C L+ + +++H V + + + + N+L Y++ G I +
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSR 579
Query: 458 TVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHA 517
T+F M+ KD+ITWN++IGGY HG AL LF QMK I P T S++ A
Sbjct: 580 TIFLGME-TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM 638
Query: 518 GLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGA 577
G V+EG++ F S+ NDY I P +EH ++ V + GR +L+EA+ I M ++ + +W +
Sbjct: 639 GNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWES 698
Query: 578 LLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMY---ANLELWDDAERVRVLMEE 634
L CR+HG++++A AA+ L SLEPE++ ++ +Y A L + + R +
Sbjct: 699 FLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR---RD 755
Query: 635 KNVKKQTGYSWVDSSN 650
+KK G SW++ N
Sbjct: 756 NLLKKPLGQSWIEVRN 771
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 18/325 (5%)
Query: 329 FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAI 388
F PD ++S +A+ G + A+ F+ M ++NL +W+++I Y + ++
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMY 447
+LF M +G PD +L C D+ GK +H +V K + L ++NS++ +Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
++CG + A F M+ +DVI WN+++ Y +G +A+EL K+M++ I P +T+
Sbjct: 227 AKCGELDFATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM- 566
++ G + M +GI V + + + L G +A+D+ M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMF 344
Query: 567 --PVKPDKAVWGALLGSCR----VHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLE 620
V P+ + + +C ++ E+ +A + + V +Y+ LE
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 621 LWDDAERVRVLMEEKNVKKQTGYSW 645
DA +V +VK + Y+W
Sbjct: 405 ---DARKVF-----DSVKNKDVYTW 421
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 397 EGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEA 456
+G K R T +L C ++LG+ +H PD+ + L++MY++CG I +A
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADA 134
Query: 457 CTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAH 516
VF+ M+ +++ TW+AMIG Y+ + +LF+ M + + P F +L CA+
Sbjct: 135 RKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 517 AGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWG 576
G VE G + +S++ G+ + S + + + G+L A M + D W
Sbjct: 194 CGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-DVIAWN 251
Query: 577 A-LLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNM 615
+ LL C+ + E ++ + +E E P ++ +N+
Sbjct: 252 SVLLAYCQNGKHEEAVELVKE----MEKEGISPGLVTWNI 287
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 192/637 (30%), Positives = 328/637 (51%), Gaps = 42/637 (6%)
Query: 31 NESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISG-------HVKRREI 83
N+ SLL + +++S L G + AR F S++ + +N L+ G H
Sbjct: 50 NDISLLTKLTQRLSDL---GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVF 106
Query: 84 AKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYA 143
A R+ D P ++ + + F + V G+ + D + + + + ++ Y
Sbjct: 107 AHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGC-DSELLLGSNIVKMYF 165
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM-----PECDSASLS 198
K R++ A K+FD MPE++ + N +I+G+ N ++ F+ + D+ +L
Sbjct: 166 KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLL 225
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
++ + EL + I HD V I+ Y + GK++ LF
Sbjct: 226 DILPAVAELQELRLGMQIHSLATKTGCYSHDYV--LTGFISLYSKCGKIKMGSALF---- 279
Query: 259 NDQGDGKEDGRRFRR-NVVSWNSMMMCYVKVGDIVSARELFDSM---GER---DTCAWNT 311
R FR+ ++V++N+M+ Y G+ + LF + G R T
Sbjct: 280 ----------REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
Query: 312 MISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISW 371
+SG++ + L S ++S ++ + ++++ +++ A+ F+ P+K+L SW
Sbjct: 330 PVSGHLMLIYAIHGYCLKSNFLSHASVS-TALTTVYSKLNEIESARKLFDESPEKSLPSW 388
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK 431
N++I+GY +N + AI LF +MQ P+ T++ +LS C L L LGK +H LV
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 432 TVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
T + ++ +LI MY++CG+I EA +F+ M K+ +TWN MI GY HG +AL
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLHGQGQEALN 507
Query: 491 LFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDIL 550
+F +M I PT +TF+ VL AC+HAGLV+EG FNSMI+ YG EP V+H+A VDIL
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 551 GRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYV 610
GR G LQ A+ I +M ++P +VW LLG+CR+H + LA+ ++ L L+P++ G +V
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627
Query: 611 LLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
LL N+++ + A VR +++ + K GY+ ++
Sbjct: 628 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 328/659 (49%), Gaps = 98/659 (14%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVS-- 100
+S ++G LS AR F+ M+ RN VT N L+ G V+++ +A +LF +M VS
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE 309
Query: 101 -WNLIISGY--FSCCGSKFVEEGRKLFDEMPERDCVSW-----NTVISGYAKNGRMDQAL 152
+ +++S + +S +++GR++ + V + N +++ YAK G + A
Sbjct: 310 SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR 369
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
++F M ++++VS N++ITG NG AV +K M
Sbjct: 370 RVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR---------------------- 407
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
+HD++ TLI+ ++ A+ Q G+
Sbjct: 408 --------------RHDILPGSFTLISSLSSCASLKWAKL------GQQIHGESLKLGID 447
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQIS-DMEEASKLF-- 329
NV N++M Y + G + R++F SM E D +WN++I + + EA F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 330 -------------------------------------KEMPSPDALSWNSIISGFAQIGD 352
K + +A + N++I+ + + G+
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 567
Query: 353 LKVAKDFFERMPQK-NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ + F RM ++ + ++WNS+I+GY NE A++L M G++ D ++VLS
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 627
Query: 412 VCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
+ L G ++H + + D+ + ++L+ MYS+CG + A FN M ++
Sbjct: 628 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV-RNSY 686
Query: 471 TWNAMIGGYASHGLAVDALELFKQMK-RLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+WN+MI GYA HG +AL+LF+ MK + P ++TF+ VL+AC+HAGL+EEG + F S
Sbjct: 687 SWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 746
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS-CRVHG-N 587
M + YG+ PR+EHF+ D+LGR G+L + D I MP+KP+ +W +LG+ CR +G
Sbjct: 747 MSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRK 806
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
EL + AA+ L LEPE++ YVLL NMYA W+D + R M++ +VKK+ GYSWV
Sbjct: 807 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 169/708 (23%), Positives = 283/708 (39%), Gaps = 156/708 (22%)
Query: 20 RGLASFHKTNDNESSL---LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISG 76
RG A F + ++ L ++ N I+ + TG AR FD M RN V+W ++SG
Sbjct: 17 RGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSG 76
Query: 77 HVKRREIAKARQLFDEMPQR---------------------------------------- 96
+ + E +A +M +
Sbjct: 77 YSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYA 136
Query: 97 -DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
D V N++IS Y+ C GS V F ++ ++ VSWN++IS Y++ G A ++F
Sbjct: 137 VDAVVSNVLISMYWKCIGS--VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 156 DAM------PERNAVSS-----------------------------------NAVITGFL 174
+M P S + +++ F
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA 254
Query: 175 LNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY 234
+G + A F +M ++ +L+ L+ GLVR + A + + D + ++Y
Sbjct: 255 KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFM---DMNSMIDVSPESY 311
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW----------NSMMMC 284
L++ + + EE G + GR +V++ N ++
Sbjct: 312 VILLSSFPEYSLAEEV-------------GLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 285 YVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPD-------- 336
Y K G I AR +F M ++D+ +WN+MI+G Q EA + +K M D
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 337 --------ALSW-----------------------NSIISGFAQIGDLKVAKDFFERMPQ 365
+L W N++++ +A+ G L + F MP+
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 366 KNLISWNSLIAGYDKNE-DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
+ +SWNS+I ++E A+ F Q G+K +R T SSVLS + L LGKQ
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 425 MHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+H L K I D N+LI Y +CG + +F+ M +D +TWN+MI GY +
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 484 LAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHF 543
L AL+L M + + +VL+A A +E G + +E V
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA-CLESDVVVG 657
Query: 544 ASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
++ VD+ + G+L A+ N+MPV+ + W +++ HG E A
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQGEEA 704
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 17/309 (5%)
Query: 326 SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
S+L+K D N++I+ + + GD A+ F+ MP +N +SW +++GY +N ++K
Sbjct: 25 SRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHK 84
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTK-TVIPDLPINNS 442
A+ M EG +++ SVL C G V + G+Q+H L+ K + D ++N
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 443 LITMYSRC-GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
LI+MY +C G++G A F +++ K+ ++WN++I Y+ G A +F M+
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEV-KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 502 PTYITFIS-VLNACAHAGLVEEGRR---QFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
PT TF S V AC+ L E R Q I G+ + + V + G L
Sbjct: 204 PTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 558 EAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVA--AQALISLEPESSGPYVLLYNM 615
A + N M + + G ++G R E ++ ++I + PES YV+L +
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPES---YVILLSS 317
Query: 616 YANLELWDD 624
+ L ++
Sbjct: 318 FPEYSLAEE 326
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 310/657 (47%), Gaps = 65/657 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N IS + LS+A FD M RN VTW T++SG+ + KA +L+ M +
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 100 SWN-LIISGYFSCCG-------------------------------SKFVEEGRKL---- 123
+ N + S CG +V+ GR +
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 124 -FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
F E+ SWNT+ISGY K G MD+A+ LF MP+ N VS N +I+GF+ G A
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRA 222
Query: 183 VGFFKRMPE----CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLI 238
+ F RM D +L + G L M G L C G A + LI
Sbjct: 223 LEFLVRMQREGLVLDGFALPCGLKACSFGGLLTM--GKQLHCCVVKSGLESSPFAISALI 280
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
Y G + A +F ++ +V WNSM+ ++ + +A L
Sbjct: 281 DMYSNCGSLIYAADVF----------HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL 330
Query: 299 DSMGERDTCAWNTMISGYVQIS--------DMEEASKLFKEMPSPDALSWNSIISGFAQI 350
+ + D C + +SG ++I ++ S + D + + ++ A +
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANV 390
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G+++ A F R+P K++I+++ LI G K+ A LF ++ G D+ +S++L
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 411 SVCTGLVDLYLGKQMHQLVTKTVIPDLPIN-NSLITMYSRCGAIGEACTVFNEMKFYKDV 469
VC+ L L GKQ+H L K P+ +L+ MY +CG I +F+ M +DV
Sbjct: 451 KVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-LERDV 509
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
++W +I G+ +G +A F +M + I P +TF+ +L+AC H+GL+EE R +
Sbjct: 510 VSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLET 569
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
M ++YG+EP +EH+ VD+LG+ G QEA +LIN MP++PDK +W +LL +C H N
Sbjct: 570 MKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAG 629
Query: 590 LAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
L V A+ L+ P+ Y L N YA L +WD +VR +K K++G SW+
Sbjct: 630 LVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE-AAKKLGAKESGMSWI 685
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 146/590 (24%), Positives = 268/590 (45%), Gaps = 98/590 (16%)
Query: 79 KRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTV 138
KR E +A + + Q ++ N +IS Y + + + K+FDEM ER+ V+W T+
Sbjct: 22 KRGESIQAHVIKQGISQNVFIANN-VISMYVD---FRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSN-----AVITGFLLNGDVDSAVGFFKRMPE-- 191
+SGY +G+ ++A++L+ M + ++N AV+ L GD+ + ++R+ +
Sbjct: 78 VSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKEN 137
Query: 192 --CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
D +++++ V+NG L A E ++NTLI+GY ++G ++E
Sbjct: 138 LRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSS------TSWNTLISGYCKAGLMDE 191
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL-FDSMGERD--- 305
A LF R+P + NVVSWN ++ +V G S R L F +R+
Sbjct: 192 AVTLFHRMP-------------QPNVVSWNCLISGFVDKG---SPRALEFLVRMQREGLV 235
Query: 306 -----------TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
C++ +++ Q+ S L SP A+S ++I ++ G L
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGL---ESSPFAIS--ALIDMYSNCGSLI 290
Query: 355 VAKDFF--ERMPQKNLIS-WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
A D F E++ + ++ WNS+++G+ NE+ + A+ L Q+ D +TLS L
Sbjct: 291 YAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALK 350
Query: 412 VCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
+C V+L LG Q+H LV + D + + L+ +++ G I +A +F+ + KD+I
Sbjct: 351 ICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDII 409
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
++ +I G G A LF+++ +L + ++L C+ + G +Q + +
Sbjct: 410 AFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG-KQIHGL 468
Query: 531 INDYGIEPRVEHFASFVDI-------------------------------LGRQGQLQEA 559
G E + VD+ G+ G+++EA
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 560 MDLINSM---PVKPDKAVWGALLGSCRVHGNVELAQVAAQALIS---LEP 603
+ M ++P+K + LL +CR G +E A+ + + S LEP
Sbjct: 529 FRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEP 578
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 219/511 (42%), Gaps = 55/511 (10%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN IS + G + EA T F M N V+WN LISG V + +A + M QR+
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRM-QRE- 232
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----------SWNTVISGYAKNGRM 148
L++ G+ CG K G L CV + + +I Y+ G +
Sbjct: 233 ---GLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSL 289
Query: 149 DQALKLFDAMPERNAVSS-----NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISG 203
A +F E+ AV+S N++++GFL+N + ++A+ ++ + D S +SG
Sbjct: 290 IYAADVFH--QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSG 347
Query: 204 LVR--NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ 261
++ +++ G+ + G + L+ + G +++A +LF R+PN
Sbjct: 348 ALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-- 405
Query: 262 GDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD 321
+++++++ ++ VK G A LF + + A ++S +++
Sbjct: 406 -----------KDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCS 454
Query: 322 MEEASKLFKEMPS--------PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNS 373
+ K++ + ++ +++ + + G++ F+ M +++++SW
Sbjct: 455 SLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTG 514
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTK 431
+I G+ +N + A F +M G +P++ T +LS C +GL++
Sbjct: 515 IIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEY 574
Query: 432 TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH---GLAVDA 488
+ P L ++ + + G EA + N+M D W +++ +H GL
Sbjct: 575 GLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVI 634
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGL 519
E K +K P+ T +S NA A G+
Sbjct: 635 AE--KLLKGFPDDPSVYTSLS--NAYATLGM 661
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 222/352 (63%), Gaps = 2/352 (0%)
Query: 296 ELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKV 355
+ F S E D+ T+I+ Y ++ + A ++F EM D WN++I+G+ + GD+K
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKA 166
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCT 414
A + F+ MP+KN+ SW ++I+G+ +N +Y A+++F M+ + KP+ T+ SVL C
Sbjct: 167 AMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACA 226
Query: 415 GLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
L +L +G+++ + D + + N+ I MYS+CG I A +F E+ +++ +WN
Sbjct: 227 NLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWN 286
Query: 474 AMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
+MIG A+HG +AL LF QM R P +TF+ +L AC H G+V +G+ F SM
Sbjct: 287 SMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 534 YGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQV 593
+ I P++EH+ +D+LGR G+LQEA DLI +MP+KPD VWG LLG+C HGNVE+A++
Sbjct: 347 HKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEI 406
Query: 594 AAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
A++AL LEP + G V++ N+YA E WD R+R LM+++ + K GYS+
Sbjct: 407 ASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSY 458
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 140/309 (45%), Gaps = 40/309 (12%)
Query: 88 QLFDEMPQRDIVSWNLIISGYFS----CCGSKFVEEGRKLFDEMPERDCVSWNTVISGYA 143
Q F + D +I+ Y CC R++FDEM +RD WN +I+GY
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCA-------RRVFDEMSKRDVPVWNAMITGYQ 159
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA-----SLS 198
+ G M A++LFD+MP +N S VI+GF NG+ A+ F M + S ++
Sbjct: 160 RRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVV 219
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+++ GEL++ G LE + G D + N I Y + G ++ A+RLF+ +
Sbjct: 220 SVLPACANLGELEI--GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG 277
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GER-DTCAWNTMIS 314
N +RN+ SWNSM+ G A LF M GE+ D + ++
Sbjct: 278 N------------QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLL 325
Query: 315 GYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NL 368
V + + +LFK M SP + +I ++G L+ A D + MP K +
Sbjct: 326 ACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDA 385
Query: 369 ISWNSLIAG 377
+ W +L+
Sbjct: 386 VVWGTLLGA 394
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 170/398 (42%), Gaps = 50/398 (12%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
+ L+ L AR FD ++ T +N LI + + P IV +N
Sbjct: 23 LQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQ-----------PHESIVLYN 71
Query: 103 LII---------SGYFSCCGSKFVEEGRKL-------FDEMPERDCVSWNTVISGYAKNG 146
L+ + F S R L F E D T+I+ YAK G
Sbjct: 72 LLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLG 131
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
+ A ++FD M +R+ NA+ITG+ GD+ +A+ F MP + S + +ISG +
Sbjct: 132 ALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQ 191
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
NG A + L C + D+ +++ G++E RRL +G +E
Sbjct: 192 NGNYSEALKMFL-CMEKDKSVKPNHITVVSVLPACANLGELEIGRRL-------EGYARE 243
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG-ERDTCAWNTMISGYVQISDMEEA 325
+G F N+ N+ + Y K G I A+ LF+ +G +R+ C+WN+MI +EA
Sbjct: 244 NG--FFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 326 SKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-----WNSLIA 376
LF +M PDA+++ ++ G + ++ F+ M + + IS + +I
Sbjct: 302 LTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMID 361
Query: 377 GYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
+ + A +L M + KPD ++L C+
Sbjct: 362 LLGRVGKLQEAYDLIKTMPM---KPDAVVWGTLLGACS 396
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 18/234 (7%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN I+ R G + A FDSM +N +W T+ISG + ++A ++F M +
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 99 VSWNLI--ISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQAL 152
V N I +S +C +E GR+L E + N I Y+K G +D A
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 153 KLFDAM-PERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRN 207
+LF+ + +RN S N++I +G D A+ F +M + D+ + L+ V
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 208 GELDMAAGILLECGDGDEGKHDL---VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
G + E E H + ++ Y +I G+ GK++EA L +P
Sbjct: 331 GMVVKGQ----ELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMP 380
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 321/621 (51%), Gaps = 43/621 (6%)
Query: 55 ARTFFDSMKHRNTV-TWNTLISGHVKRREIAKARQLFDEMPQRDIV-----SWNLIISGY 108
AR F++ R+ V WN+L+SG+ K ++F + I ++ +I Y
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 109 FSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV 164
G +F+ GR + + + D V ++++ YAK + +L++FD MPER+
Sbjct: 118 -GALGREFL--GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA 174
Query: 165 SSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLEC 220
S N VI+ F +G+ + A+ F RM E +S SL+ IS R L+ I +C
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
+ V + L+ YG+ +E AR +F ++P R+++V+WNS
Sbjct: 235 VKKGFELDEYVNS--ALVDMYGKCDCLEVAREVFQKMP-------------RKSLVAWNS 279
Query: 281 MMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEE--------ASKLFKEM 332
M+ YV GD S E+ + M T T ++ + + + +
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
+ D S+I + + G+ +A+ F + + SWN +I+ Y ++ A+E++
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCG 451
QM G KPD T +SVL C+ L L GKQ+H ++++ + D + ++L+ MYS+CG
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVL 511
EA +FN + KDV++W MI Y SHG +AL F +M++ + P +T ++VL
Sbjct: 460 NEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 512 NACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPD 571
+AC HAGL++EG + F+ M + YGIEP +EH++ +DILGR G+L EA ++I P D
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Query: 572 KA-VWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
A + L +C +H L A+ L+ P+ + Y++L+N+YA+ E WD A RVR+
Sbjct: 579 NAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 631 LMEEKNVKKQTGYSWVDSSNR 651
M+E ++K+ G SW++ S++
Sbjct: 639 KMKEMGLRKKPGCSWIEMSDK 659
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 21/252 (8%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSM----KHRNTVTWNTLISGHVKR 80
F KT + + WN IS I G +A +D M + VT+ +++ +
Sbjct: 367 FSKTQKD---VAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 81 REIAKARQLFDEMPQRDIVSWNLIISGY---FSCCGSKFVEEGRKLFDEMPERDCVSWNT 137
+ K +Q+ + + + + L++S +S CG++ +E ++F+ +P++D VSW
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE--KEAFRIFNSIPKKDVVSWTV 481
Query: 138 VISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMP--- 190
+IS Y +G+ +AL FD M + + V+ AV++ G +D + FF +M
Sbjct: 482 MISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKY 541
Query: 191 --ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
E S +I L R G L A I+ + + + L ++ S
Sbjct: 542 GIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDR 601
Query: 249 EARRLFDRIPND 260
AR L + P+D
Sbjct: 602 IARLLVENYPDD 613
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM----PQRDIVSWN 102
+ G + A T F + +WN +IS ++ KA +++D+M + D+V++
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 103 LIISGYFSCCGSKFVEEGRKLF----DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
++ +C +E+G+++ + E D + + ++ Y+K G +A ++F+++
Sbjct: 415 SVLP---ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSI 471
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAA 214
P+++ VS +I+ + +G A+ F M + D +L A++S G +D
Sbjct: 472 PKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGL 531
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
+ G +++ Y+ +I G++G++ EA + + P + +
Sbjct: 532 KFFSQ-MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAE 581
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 157/411 (38%), Gaps = 58/411 (14%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM-PQRDIVSWNLIISGYFS 110
L AR F M ++ V WN++I G+V + + ++ + M + S + S +
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 111 CCGSKFVEEGR----KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
C S+ + G+ + + D ++I Y K G + A +F + A S
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGD 222
N +I+ ++ G+ AV + +M D + ++++ + L+ I L +
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISE 438
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
+L+ + L+ Y + G +EA R+F+ IP +++VVSW M+
Sbjct: 439 SRLETDELL--LSALLDMYSKCGNEKEAFRIFNSIP-------------KKDVVSWTVMI 483
Query: 283 MCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNS 342
Y G A FD M K PD ++ +
Sbjct: 484 SAYGSHGQPREALYQFDEMQ---------------------------KFGLKPDGVTLLA 516
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG----AIELFSQMQLEG 398
++S G + FF +M K I +I Y D G +E + +Q
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGI--EPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
Query: 399 EKPDR-HTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYS 448
E D LS++ S C ++ LG ++ +L+ + D L +Y+
Sbjct: 575 ETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYA 625
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 406 LSSVLSVCTGLV-DLYLGKQMHQ-LVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM 463
L S+L CT L K +HQ ++T + D+ + SLI +Y C A VF
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 464 KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH-PTYITFISVLNACAHAGLVEE 522
DV WN+++ GY+ + + D LE+FK++ I P TF +V+ A G
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 523 GRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSC 582
G R ++++ G V +S V + + + ++ + + MP + D A W ++
Sbjct: 126 G-RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER-DVASWNTVISCF 183
Query: 583 RVHGNVELA 591
G E A
Sbjct: 184 YQSGEAEKA 192
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 220/347 (63%), Gaps = 5/347 (1%)
Query: 310 NTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
NTMI YV+ ++ A K+F EMP D +SW +I+ +A++G+++ A + FE +P K+++
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
+W +++ G+ +N + A+E F +M+ G + D T++ +S C L + Q+
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 430 TKTVIP---DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAV 486
K+ + I ++LI MYS+CG + EA VF M K+V T+++MI G A+HG A
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN-NKNVFTYSSMILGLATHGRAQ 366
Query: 487 DALELFKQM-KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
+AL LF M + +I P +TF+ L AC+H+GLV++GR+ F+SM +G++P +H+
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 546 FVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPES 605
VD+LGR G+LQEA++LI +M V+P VWGALLG+CR+H N E+A++AA+ L LEP+
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 606 SGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNRQ 652
G Y+LL N+YA+ W RVR L++EK +KK SWV N Q
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQ 533
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 170/410 (41%), Gaps = 77/410 (18%)
Query: 129 ERDCVSWNTVISGYAKNG-RMDQ-ALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF 186
++ C +I K G MD A ++ + + RN AVI G+ + G D A+ +
Sbjct: 78 DQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMY 137
Query: 187 KRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD--------LVQAYNTLI 238
M + + +S S L++ A G + + G + V NT+I
Sbjct: 138 GCMRKEEITPVSFTFSALLK------ACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMI 191
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
Y + ++ AR++FD +P R+V+SW ++ Y +VG++ A ELF
Sbjct: 192 DMYVKCESIDCARKVFDEMP-------------ERDVISWTELIAAYARVGNMECAAELF 238
Query: 299 DSMGERDTCAWNTMISGYVQISDMEEASKLFKEM-------------------------- 332
+S+ +D AW M++G+ Q + +EA + F M
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 333 ---------------PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAG 377
PS + +++I +++ G+++ A + F M KN+ +++S+I G
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 378 YDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKT-- 432
+ + A+ LF M + E KP+ T L C +GLVD G+Q+ + +T
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD--QGRQVFDSMYQTFG 416
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
V P ++ + R G + EA + M W A++G H
Sbjct: 417 VQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 53/298 (17%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS 114
AR + ++ RN W +I G+ + +A ++ M + +I + S CG+
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 115 K--------------------FVEEG----------------RKLFDEMPERDCVSWNTV 138
FV G RK+FDEMPERD +SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDS 194
I+ YA+ G M+ A +LF+++P ++ V+ A++TGF N A+ +F RM + D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
+++ IS + G A + D V + LI Y + G VEEA +F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTM 312
+ N +NV +++SM++ G A LF M + NT+
Sbjct: 342 MSMNN-------------KNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV 386
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 154/352 (43%), Gaps = 33/352 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I ++ + AR FD M R+ ++W LI+ + + + A +LF+ +P +D+V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGY-------AKNGRMDQAL 152
+W +++G+ + +E + FD M + + ++GY + D+A+
Sbjct: 248 AWTAMVTGF---AQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAV 304
Query: 153 KLFDA---MPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGE 209
++ P + V +A+I + G+V+ AV F M + + S++I GL +G
Sbjct: 305 QIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGR 364
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
A + E K + V L+A SG V++ R++FD + Q G + R
Sbjct: 365 AQEALHLFHYMVTQTEIKPNTVTFVGALMAC-SHSGLVDQGRQVFDSMY--QTFGVQPTR 421
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG-ERDTCAWNTMISGYVQISDMEEASKL 328
+ M+ + G + A EL +M E W ++ G +I + E +++
Sbjct: 422 D------HYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALL-GACRIHNNPEIAEI 474
Query: 329 FKEM---PSPDALSWNSIISG-FAQIGD----LKVAKDFFERMPQKN-LISW 371
E PD + ++S +A GD L+V K E+ +K +SW
Sbjct: 475 AAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W + I+ R G + A F+S+ ++ V W +++G + + +A + FD M + I
Sbjct: 218 WTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
Query: 99 VSWNLIISGYFSCC----GSKFVEEGRKLFDE---MPERDCVSWNTVISGYAKNGRMDQA 151
+ + ++GY S C SK+ + ++ + P V + +I Y+K G +++A
Sbjct: 278 RADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEA 337
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
+ +F +M +N + +++I G +G A+ F M
Sbjct: 338 VNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYM 375
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 286/602 (47%), Gaps = 101/602 (16%)
Query: 102 NLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
N +++ Y C + + + RK+FDEM D VSWN++I YAK G+ AL++F M
Sbjct: 166 NALVAMYSRC---RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG 221
+ + L+N +P C S +L G L C
Sbjct: 223 FGCRPDNIT---LVN-----------VLPPCASLGTHSL--------------GKQLHCF 254
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
+ N L+ Y + G ++EA +F + ++VVSWN+M
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMS-------------VKDVVSWNAM 301
Query: 282 MMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS--- 334
+ Y ++G A LF+ M E D W+ ISGY Q EA + ++M S
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 335 -PDALSWNSIISGFAQIGDL---------------------------------------- 353
P+ ++ S++SG A +G L
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 354 --KVAKDFFERMPQK--NLISWNSLIAGYDKNEDYKGAIELFSQMQLEG--EKPDRHTLS 407
A+ F+ + K ++++W +I GY ++ D A+EL S+M E +P+ T+S
Sbjct: 422 KVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 408 SVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP--INNSLITMYSRCGAIGEACTVFNEMKF 465
L C L L +GKQ+H + +P ++N LI MY++CG+I +A VF+ M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM-M 540
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
K+ +TW +++ GY HG +AL +F +M+R+ +T + VL AC+H+G++++G
Sbjct: 541 AKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME 600
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
FN M +G+ P EH+A VD+LGR G+L A+ LI MP++P VW A L CR+H
Sbjct: 601 YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH 660
Query: 586 GNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
G VEL + AA+ + L G Y LL N+YAN W D R+R LM K VKK+ G SW
Sbjct: 661 GKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSW 720
Query: 646 VD 647
V+
Sbjct: 721 VE 722
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 151/580 (26%), Positives = 249/580 (42%), Gaps = 120/580 (20%)
Query: 79 KRREIAKARQLFDEMPQRDIVSWNL---IISGYFSC-CGSKFVEEGRKLFDEMPERDC-- 132
K + I++ + + ++ I++ NL +IS Y S C S V L P D
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVS----LLRRFPPSDAGV 92
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
WN++I Y NG ++ L LF M + N V A G +
Sbjct: 93 YHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPF------VFKACGEISSVRCG 146
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
+SA +L++G + N V N L+A Y + + +AR+
Sbjct: 147 ESAHALSLVTGFISN-----------------------VFVGNALVAMYSRCRSLSDARK 183
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD------------- 299
+FD + +VVSWNS++ Y K+G A E+F
Sbjct: 184 VFDEMS-------------VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI 230
Query: 300 ---------------SMGERDTC------------AWNTMISGYVQISDMEEASKLFKEM 332
S+G++ C N ++ Y + M+EA+ +F M
Sbjct: 231 TLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM 290
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAI 388
D +SWN++++G++QIG + A FE+M ++ ++++W++ I+GY + A+
Sbjct: 291 SVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEAL 350
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPIN-------- 440
+ QM G KP+ TL SVLS C + L GK++H K I DL N
Sbjct: 351 GVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI-DLRKNGHGDENMV 409
Query: 441 -NSLITMYSRCGAIGEACTVFNEMKFY-KDVITWNAMIGGYASHGLAVDALELFKQM--K 496
N LI MY++C + A +F+ + +DV+TW MIGGY+ HG A ALEL +M +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 497 RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR---VEHFAS--FVDILG 551
+ P T L ACA + G++ I+ Y + + V F S +D+
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQ-----IHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 552 RQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+ G + +A + ++M K ++ W +L+ +HG E A
Sbjct: 525 KCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGEEA 563
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 207/515 (40%), Gaps = 90/515 (17%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ---- 95
N ++ R LS+AR FD M + V+WN++I + K + A ++F M
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 96 ------------------------------------RDIVSWNLIISGYFSCCGSKFVEE 119
+++ N ++ Y C ++E
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC---GMMDE 282
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLL 175
+F M +D VSWN +++GY++ GR + A++LF+ M E + V+ +A I+G+
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 176 NGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGI----------LLECG 221
G A+G ++M + +L +++SG G L I L + G
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNG 402
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
GDE N LI Y + KV+ AR +FD + + R+VV+W M
Sbjct: 403 HGDEN-----MVINQLIDMYAKCKKVDTARAMFDSLSPKE-----------RDVVTWTVM 446
Query: 282 MMCYVKVGDIVSARELFDSMGERD----------TCAWNTMIS-GYVQISDMEEASKLFK 330
+ Y + GD A EL M E D +CA S ++I A L
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 331 EMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
+ + N +I +A+ G + A+ F+ M KN ++W SL+ GY + + A+ +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 391 FSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYS 448
F +M+ G K D TL VL C +G++D + V P L+ +
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 449 RCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
R G + A + EM + W A + HG
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 143/364 (39%), Gaps = 53/364 (14%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKR----REIAKARQLF 90
WN ++ + GR +A F+ M+ + VTW+ ISG+ +R + RQ+
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 91 DEMPQRDIVSWNLIISGYFS-----------CCGSKFVEEGRKLFDEMPERDCVSWNTVI 139
+ + V+ ++SG S C K+ + RK + + + V N +I
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK--NGHGDENMV-INQLI 414
Query: 140 SGYAKNGRMDQALKLFDAMP--ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECD---- 193
YAK ++D A +FD++ ER+ V+ +I G+ +GD + A+ M E D
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 194 --SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEAR 251
+ ++S + L + I + L + N LI Y + G + +AR
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDAR 533
Query: 252 RLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTC 307
+FD + +N V+W S+M Y G A +FD M + D
Sbjct: 534 LVFDNM-------------MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 308 AWNTMISGYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFER 362
++ +++ + F M SP + ++ + G L A E
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Query: 363 MPQK 366
MP +
Sbjct: 641 MPME 644
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/656 (29%), Positives = 320/656 (48%), Gaps = 88/656 (13%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
K +S R G + EA F+ + + V ++T++ G K ++ KA Q F M D+
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 100 SWNLIISGYFSCCGSKF-VEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKL 154
+ CG + + G+++ + + D + + + YAK ++++A K+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
FD RMPE D S + +++G +NG MA
Sbjct: 193 FD-------------------------------RMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
++ + +L ++ T+++ A RL G G F
Sbjct: 222 EMV-----KSMCEENLKPSFITIVSVL----PAVSALRLISVGKEIHGYAMRSG--FDSL 270
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM-- 332
V +++ Y K G + +AR+LFD M ER+ +WN+MI YVQ + +EA +F++M
Sbjct: 271 VNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 333 --PSPDALSW-----------------------------------NSIISGFAQIGDLKV 355
P +S NS+IS + + ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
A F ++ + L+SWN++I G+ +N A+ FSQM+ KPD T SV++
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 416 LVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
L + K +H +V ++ + ++ + +L+ MY++CGAI A +F+ M + V TWNA
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNA 509
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
MI GY +HG ALELF++M++ I P +TF+SV++AC+H+GLVE G + F M +Y
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVA 594
IE ++H+ + VD+LGR G+L EA D I MPVKP V+GA+LG+C++H NV A+ A
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
Query: 595 AQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSN 650
A+ L L P+ G +VLL N+Y +W+ +VRV M + ++K G S V+ N
Sbjct: 630 AERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 29/252 (11%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKAR 87
+S L WN I + GR +A +F M+ R +T T+ ++I+ + I
Sbjct: 399 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA-IAELSITHHA 457
Query: 88 QLFDEMPQRDIVSWNLIISG----YFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYA 143
+ + R + N+ ++ ++ CG+ + R +FD M ER +WN +I GY
Sbjct: 458 KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI--ARLIFDMMSERHVTTWNAMIDGYG 515
Query: 144 KNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLS- 198
+G AL+LF+ M + N V+ +VI+ +G V++ + F M E S LS
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 199 ----ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKV----EEA 250
A++ L R G L+ A +++ V Y ++ V + A
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQM-----PVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 251 RRLFDRIPNDQG 262
RLF+ P+D G
Sbjct: 631 ERLFELNPDDGG 642
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 213/732 (29%), Positives = 337/732 (46%), Gaps = 131/732 (17%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N+ + I G AR FD M R+ +WN ++ K ++ +A ++FD MP+RD+V
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 100 SWN---------------LIISGYFSCCG---SKF-----VEEGRKLFDEM--------- 127
SWN L++ C G S+F + K+ D +
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 128 ----PERDCVSWNTVISGYAKNGRM-DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+++ N ++S YAK G + D +++F+++ + N VS AVI G V A
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEA 224
Query: 183 VGFFKRMPE----------------------CDSAS----------LSALISGLVRNGEL 210
V F+ M E CDS S + L L G+L
Sbjct: 225 VQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDL 284
Query: 211 DMAAGIL-LECGDGDEGKHDLVQA---------YNTLIAGYGQSGKVEEARRLFDRIPND 260
+ +L + + D +L+ A +N +I G+GQ + +++ R+ D
Sbjct: 285 HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRM-RD 343
Query: 261 QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQIS 320
G F+ N V+ S++ + GD+ + R +F S+ + AWN M+SGY
Sbjct: 344 SG--------FQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 321 DMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKD------------------ 358
EEA F++M PD + + I+S A++ L+ K
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 359 ------------------FFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM-QLEGE 399
F + + + ++ WNS+I+G+ N A+ LF +M Q
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACT 458
P+ + ++VLS C+ L L G+Q H LV K+ + D + +L MY +CG I A
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQ 575
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
F+ + K+ + WN MI GY +G +A+ L+++M P ITF+SVL AC+H+G
Sbjct: 576 FFDAV-LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSG 634
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
LVE G +SM +GIEP ++H+ VD LGR G+L++A L + P K +W L
Sbjct: 635 LVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEIL 694
Query: 579 LGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
L SCRVHG+V LA+ A+ L+ L+P+SS YVLL N Y++L WDD+ ++ LM + V
Sbjct: 695 LSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVH 754
Query: 639 KQTGYSWVDSSN 650
K G SW N
Sbjct: 755 KTPGQSWTTYGN 766
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/570 (26%), Positives = 265/570 (46%), Gaps = 73/570 (12%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD 125
+T N L+ +++ + AR++FDEM RD+ SWN ++ C + E ++FD
Sbjct: 40 DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFR---CKVGDLGEACEVFD 96
Query: 126 EMPERDCVSWNTVISGYAKNGRMDQALKLFDAM------PERNAVSS------------- 166
MPERD VSWN +IS + G ++AL ++ M P R ++S
Sbjct: 97 GMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVF 156
Query: 167 --------------------NAVITGFLLNG-DVDSAVGFFKRMPECDSASLSALISGLV 205
NA+++ + G VD V F+ + + + S +A+I GL
Sbjct: 157 GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLA 216
Query: 206 R-NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
R N L+ L C G + D V N L + R D + G+
Sbjct: 217 RENKVLEAVQMFRLMCEKGVQ--VDSVCLSNIL--------SISAPREGCDSLSEIYGN- 265
Query: 265 KEDGRR---------FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISG 315
E G++ F ++ NS++ Y K D+ A +F M E + +WN MI G
Sbjct: 266 -ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 316 YVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISW 371
+ Q +++ + M P+ ++ S++ + GD++ + F +PQ ++ +W
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAW 384
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK 431
N++++GY E Y+ AI F QMQ + KPD+ TLS +LS C L L GKQ+H +V +
Sbjct: 385 NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIR 444
Query: 432 TVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
T I + I + LI +YS C + + +F++ D+ WN+MI G+ + L AL
Sbjct: 445 TEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALI 504
Query: 491 LFKQMKRLKI-HPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDI 549
LF++M + + P +F +VL++C+ + G RQF+ ++ G + D+
Sbjct: 505 LFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG-RQFHGLVVKSGYVSDSFVETALTDM 563
Query: 550 LGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ G++ A +++ ++ + +W ++
Sbjct: 564 YCKCGEIDSARQFFDAV-LRKNTVIWNEMI 592
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 195/623 (31%), Positives = 316/623 (50%), Gaps = 53/623 (8%)
Query: 55 ARTFFDSMKHR--NTVTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNLIISGY 108
AR FD + H N + W+ +I + KA L+ +M + ++ ++
Sbjct: 54 ARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLK-- 111
Query: 109 FSCCGSKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDAMPERNAV 164
+C G + +++G+ + + D + ++ YAK G ++ A+K+FD MP+R+ V
Sbjct: 112 -ACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMV 170
Query: 165 SSNAVITGFLLNGDVDSAVGFFKRMPECD--SASLSALISGLVRNGELDMAAGILLECGD 222
+ NA+I+GF L+ + +G F M D S +LS ++ G AG L E G
Sbjct: 171 AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGR----AGALRE-GK 225
Query: 223 GDEGKHDLVQAYNTLIAG------YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
G + N L+ Y +S + ARR+FD F++N V
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDL-------------DFKKNEV 272
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS------GYVQISDMEEASKL-- 328
+W++M+ YV+ I A E+F M D A T ++ G + D+ +
Sbjct: 273 TWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHC 332
Query: 329 --FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG 386
K D N+IIS +A+ G L A F + K++IS+NSLI G N +
Sbjct: 333 YAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEE 392
Query: 387 AIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLIT 445
+ LF +M+ G +PD TL VL+ C+ L L G H V + I N+L+
Sbjct: 393 SFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMD 452
Query: 446 MYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI 505
MY++CG + A VF+ M +D+++WN M+ G+ HGL +AL LF M+ ++P +
Sbjct: 453 MYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEV 511
Query: 506 TFISVLNACAHAGLVEEGRRQFNSMI-NDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
T +++L+AC+H+GLV+EG++ FNSM D+ + PR++H+ D+L R G L EA D +N
Sbjct: 512 TLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVN 571
Query: 565 SMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDD 624
MP +PD V G LL +C + N EL ++ + SL E++ VLL N Y+ E W+D
Sbjct: 572 KMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAAERWED 630
Query: 625 AERVRVLMEEKNVKKQTGYSWVD 647
A R+R++ +++ + K GYSWVD
Sbjct: 631 AARIRMIQKKRGLLKTPGYSWVD 653
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 219/481 (45%), Gaps = 52/481 (10%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNL-IIS 106
+ G L A FD M R+ V WN +ISG + LF +M + D +S NL I
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIV 209
Query: 107 GYFSCCG-SKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
G F G + + EG+ + D V ++ YAK+ + A ++FD ++
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK 269
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSA------LISGLVRNGELDMAAG 215
N V+ +A+I G++ N + A F +M D+ ++ ++ G R G D++ G
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFG--DLSGG 327
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
+ C G + NT+I+ Y + G + +A R F I ++V
Sbjct: 328 RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG-------------LKDV 374
Query: 276 VSWNSMMMCYVKVGDIVSAR-----ELFDSM---GER-DTCAWNTMISGYVQISDMEEAS 326
+S+NS++ G +V+ R LF M G R D +++ ++ + S
Sbjct: 375 ISYNSLI-----TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Query: 327 KLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+ + N+++ + + G L VAK F+ M +++++SWN+++ G+ +
Sbjct: 430 SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTK---TVIPDL 437
K A+ LF+ MQ G PD TL ++LS C +GLVD GKQ+ +++ VIP +
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVD--EGKQLFNSMSRGDFNVIPRI 547
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
N + + +R G + EA N+M F D+ ++ ++ A E+ K+M+
Sbjct: 548 DHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQS 607
Query: 498 L 498
L
Sbjct: 608 L 608
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 126/329 (38%), Gaps = 90/329 (27%)
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
Y +VE AR +FD IP+ R N ++W+ M+ Y A +L+
Sbjct: 45 YASCNEVELARHVFDEIPHP-----------RINPIAWDLMIRAYASNDFAEKALDLYYK 93
Query: 301 M---GERDT----------CA--------------------------WNTMISGYVQISD 321
M G R T CA ++ Y + +
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE 153
Query: 322 MEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKN 381
+E A K+F EMP D ++WN++ISGF+ L
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL---------------------------- 185
Query: 382 EDYKGAIELFSQM-QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPI 439
I LF M +++G P+ T+ + L GK +H T+ DL +
Sbjct: 186 ---TDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 440 NNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM---- 495
++ +Y++ I A VF ++ F K+ +TW+AMIGGY + + +A E+F QM
Sbjct: 243 KTGILDVYAKSKCIIYARRVF-DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGR 524
+ P I I L CA G + GR
Sbjct: 302 NVAMVTPVAIGLI--LMGCARFGDLSGGR 328
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 23/235 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----Q 95
N IS + G L +A F + ++ +++N+LI+G V ++ +LF EM +
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 96 RDIVSW--------NLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGR 147
DI + +L G+ S C V G + + N ++ Y K G+
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI-------CNALMDMYTKCGK 459
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISG 203
+D A ++FD M +R+ VS N ++ GF ++G A+ F M E D +L A++S
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+G +D + GD + YN + ++G ++EA +++P
Sbjct: 520 CSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMP 574
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 16 TLCSRGLASFHKTNDNESSLLHQW-------NKKISHLIRTGRLSEARTFFDSMKHRNTV 68
T CS A H ++ + ++H + N + + G+L A+ FD+M R+ V
Sbjct: 417 TACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIV 476
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG-SKFVEEGRKLFDEM 127
+WNT++ G +A LF+ M + + + + S C S V+EG++LF+ M
Sbjct: 477 SWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSM 536
Query: 128 PERD------CVSWNTVISGYAKNGRMDQALKLFDAMP 159
D +N + A+ G +D+A + MP
Sbjct: 537 SRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMP 574
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 326/637 (51%), Gaps = 50/637 (7%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM-----P 94
N ++ +R G L +A F M RN +WN L+ G+ K+ +A L+ M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQ 150
+ D+ ++ ++ +C G + G+++ + E D N +I+ Y K G +
Sbjct: 193 KPDVYTFPCVLR---TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 151 ALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVR 206
A LFD MP R+ +S NA+I+G+ NG + F M + D +L+++IS
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 207 NGELDMAAGI---LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
G+ + I ++ G + + N+L Y +G EA +LF R+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVD-----ISVCNSLTQMYLNAGSWREAEKLFSRME----- 359
Query: 264 GKEDGRRFRRNVVSWNSMMMCY----VKVGDIVSARELFDSMGERDTCAWNTMISGYVQI 319
R+++VSW +M+ Y + I + R + + D ++S +
Sbjct: 360 --------RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 320 SDMEEASKLFKEMPSPDALSW----NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLI 375
D++ +L K +S+ N++I+ +++ + A D F +P+KN+ISW S+I
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 376 AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VI 434
AG N A+ QM++ +P+ TL++ L+ C + L GK++H V +T V
Sbjct: 472 AGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG 530
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
D + N+L+ MY RCG + A + FN K KDV +WN ++ GY+ G +ELF +
Sbjct: 531 LDDFLPNALLDMYVRCGRMNTAWSQFNSQK--KDVTSWNILLTGYSERGQGSMVVELFDR 588
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
M + ++ P ITFIS+L C+ + +V +G F+ M DYG+ P ++H+A VD+LGR G
Sbjct: 589 MVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAG 647
Query: 555 QLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
+LQEA I MPV PD AVWGALL +CR+H ++L +++AQ + L+ +S G Y+LL N
Sbjct: 648 ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCN 707
Query: 615 MYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+YA+ W + +VR +M+E + G SWV+ +
Sbjct: 708 LYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGK 744
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 233/520 (44%), Gaps = 94/520 (18%)
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLS 198
+ G NG++++A+KL ++M E V + + A ++ +S+S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 199 AL--------ISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
+L ++ VR G L A + G + +L ++N L+ GY + G +EA
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVF-----GKMSERNLF-SWNVLVGGYAKQGYFDEA 179
Query: 251 RRLFDR-----------------------IPNDQGDGKE-------DGRRFRRNVVSWNS 280
L+ R IP D GKE G +VV N+
Sbjct: 180 MCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP-DLARGKEVHVHVVRYGYELDIDVV--NA 236
Query: 281 MMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----PSPD 336
++ YVK GD+ SAR LFD M RD +WN MISGY + E +LF M PD
Sbjct: 237 LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 337 ALSWNSIISGFAQIGDLKVAKD-----------------------------------FFE 361
++ S+IS +GD ++ +D F
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 362 RMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYL 421
RM +K+++SW ++I+GY+ N AI+ + M + KPD T+++VLS C L DL
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 422 GKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYA 480
G ++H+L K +I + + N+LI MYS+C I +A +F+ + K+VI+W ++I G
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLR 475
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI-NDYGIEPR 539
+ +AL +QMK + + P IT + L ACA G + G+ ++ G++
Sbjct: 476 LNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDF 534
Query: 540 VEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ + + +D+ R G++ A NS K D W LL
Sbjct: 535 LPN--ALLDMYVRCGRMNTAWSQFNSQ--KKDVTSWNILL 570
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 283/522 (54%), Gaps = 31/522 (5%)
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERN-AVSSNAVITGFLLNGDVDSAVGFFKRM-P 190
+S + V GYA+ KLFD P+R+ + SN++I +L + ++ +
Sbjct: 19 ISASAVGIGYAR--------KLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRK 70
Query: 191 ECDSASLSALISGLVRNGELDMAA--GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
E A + + L ++ L M G+ L G + ++ Y + GK+
Sbjct: 71 ETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMG 130
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE-RDTC 307
AR FD +P+ R+ VSW +++ Y++ G++ A +LFD M +D
Sbjct: 131 CARNAFDEMPH-------------RSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV 177
Query: 308 AWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKN 367
+N M+ G+V+ DM A +LF EM ++W ++I G+ I D+ A+ F+ MP++N
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 368 LISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMH 426
L+SWN++I GY +N+ + I LF +MQ PD T+ SVL + L LG+ H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 427 QLVT-KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
V K + + + +++ MYS+CG I +A +F+EM K V +WNAMI GYA +G A
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNA 356
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
AL+LF M ++ P IT ++V+ AC H GLVEEGR+ F+ M + G+ ++EH+
Sbjct: 357 RAALDLFVTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGC 414
Query: 546 FVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPES 605
VD+LGR G L+EA DLI +MP +P+ + + L +C + ++E A+ + + LEP++
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 606 SGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
G YVLL N+YA + WDD V+ +M + KK+ G S ++
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 182/374 (48%), Gaps = 33/374 (8%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ-RDIVSWNLIIS 106
+ G++ AR FD M HR+ V+W LISG+++ E+ A +LFD+MP +D+V +N ++
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMD 184
Query: 107 GYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
G+ S + R+LFDEM + ++W T+I GY +D A KLFDAMPERN VS
Sbjct: 185 GFVK---SGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 167 NAVITGFLLNGDVDSAVGFFKRMP-----ECDSASLSALISGLVRNGELDMAAGILLECG 221
N +I G+ N + F+ M + D ++ +++ + G L + G C
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL--GEWCHCF 299
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
+ V+ ++ Y + G++E+A+R+FD +P Q V SWN+M
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ-------------VASWNAM 346
Query: 282 MMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD---MEEASKLFKEMP----S 334
+ Y G+ +A +LF +M + TM++ + +EE K F M +
Sbjct: 347 IHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLN 406
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
+ ++ + G LK A+D MP + N I +S ++ + +D + A + +
Sbjct: 407 AKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKK 466
Query: 394 -MQLEGEKPDRHTL 406
++LE + + L
Sbjct: 467 AVELEPQNDGNYVL 480
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 200/447 (44%), Gaps = 73/447 (16%)
Query: 83 IAKARQLFDEMPQRD--IVSWNLIISGYF------------------------------- 109
I AR+LFD+ PQRD +S N +I Y
Sbjct: 26 IGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTL 84
Query: 110 --SCCGSKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
SC S V +G +L ++ D V+ YAK G+M A FD MP R+
Sbjct: 85 TKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMPEC-DSASLSALISGLVRNGELDMAAGILLECGD 222
VS A+I+G++ G++D A F +MP D +A++ G V++G++ A +
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLF----- 199
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
DE H V + T+I GY ++ AR+LFD +P RN+VSWN+M+
Sbjct: 200 -DEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP-------------ERNLVSWNTMI 245
Query: 283 MCYVKVGDIVSARELFDSMGERDTCAWN--TMISGYVQISD-----MEEASKLFKEMPSP 335
Y + LF M + + T++S ISD + E F +
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 336 D--ALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
D +I+ +++ G+++ AK F+ MP+K + SWN++I GY N + + A++LF
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 394 MQLEGEKPDRHTLSSVLSVCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCG 451
M +E EKPD T+ +V++ C GLV+ K H + + + ++ + R G
Sbjct: 366 MMIE-EKPDEITMLAVITACNHGGLVE-EGRKWFHVMREMGLNAKIEHYGCMVDLLGRAG 423
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGG 478
++ EA + M F + I ++ +
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSA 450
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 58/268 (21%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
+N + +++G ++ AR FD M H+ +TW T+I G+ ++I AR+LFD MP+R++
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNL 238
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEM-------PERDCV----------------SW 135
VSWN +I GY C +K +EG +LF EM P+ + W
Sbjct: 239 VSWNTMIGGY---CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 136 -----------------NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGD 178
++ Y+K G +++A ++FD MPE+ S NA+I G+ LNG+
Sbjct: 296 CHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGN 355
Query: 179 VDSAVGFFKRM---PECDSASLSALIS-----GLVRNGELDMAAGILLECGDGDEGKHDL 230
+A+ F M + D ++ A+I+ GLV G ++ E G + +H
Sbjct: 356 ARAALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGR--KWFHVMREMGLNAKIEH-- 411
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
Y ++ G++G ++EA L +P
Sbjct: 412 ---YGCMVDLLGRAGSLKEAEDLITNMP 436
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/619 (29%), Positives = 313/619 (50%), Gaps = 67/619 (10%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
++A S+ ++++LI K + ++ +F M ++ + ++ F
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 112 CGSKFVEEGRKLFDEMPERDCVS---WNTVISG-----YAKNGRMDQALKLFDAMPERNA 163
C K+ ++ CVS + + G Y + GRM A K+FD M +++
Sbjct: 126 CAEL---SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLEC-GD 222
V+ SAL+ R G L+ IL E
Sbjct: 183 VTC-------------------------------SALLCAYARKGCLEEVVRILSEMESS 211
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
G E + ++N +++G+ +SG +EA +F +I + F + V+ +S++
Sbjct: 212 GIEAN---IVSWNGILSGFNRSGYHKEAVVMFQKIHH---------LGFCPDQVTVSSVL 259
Query: 283 MCY-----VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDA 337
+ +G ++ + + +D C + MI Y + + LF + +A
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQ 393
N+ I+G ++ G + A + FE ++ N++SW S+IAG +N A+ELF +
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFRE 378
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGA 452
MQ+ G KP+ T+ S+L C + L G+ H + ++ ++ + ++LI MY++CG
Sbjct: 379 MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR 438
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
I + VFN M K+++ WN+++ G++ HG A + + +F+ + R ++ P +I+F S+L+
Sbjct: 439 INLSQIVFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDK 572
AC GL +EG + F M +YGI+PR+EH++ V++LGR G+LQEA DLI MP +PD
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 573 AVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLM 632
VWGALL SCR+ NV+LA++AA+ L LEPE+ G YVLL N+YA +W + + +R M
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 633 EEKNVKKQTGYSWVDSSNR 651
E +KK G SW+ NR
Sbjct: 618 ESLGLKKNPGCSWIQVKNR 636
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 190/476 (39%), Gaps = 114/476 (23%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
+ S+ H + +R GR+ +AR FD M ++ VT + L+ + ++ + + ++
Sbjct: 154 QGSMFHMY-------MRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 92 EMP----QRDIVSWNLIISGYF--------------------------------SCCGSK 115
EM + +IVSWN I+SG+ S S+
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISG----YAKNGRMDQALKLFDAMPERNAVSSNAVIT 171
+ GR + + ++ + VIS Y K+G + + LF+ A NA IT
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 172 GFLLNGDVDSAVGFFK----RMPECDSASLSALISGLVRNG----------ELDMAA--- 214
G NG VD A+ F+ + E + S +++I+G +NG E+ +A
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 215 ------GILLECGDGDEGKH--------------DLVQAYNTLIAGYGQSGKVEEARRLF 254
+L CG+ H D V + LI Y + G++ ++ +F
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWN 310
+ +P +N+V WNS+M + G +F+S+ + D ++
Sbjct: 447 NMMPT-------------KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 311 TMISGYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFERMP- 364
+++S Q+ +E K FK M P ++ +++ + G L+ A D + MP
Sbjct: 494 SLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPF 553
Query: 365 QKNLISWNSLIAG--YDKNEDYK--GAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
+ + W +L+ N D A +LF LE E P + L S + G+
Sbjct: 554 EPDSCVWGALLNSCRLQNNVDLAEIAAEKLF---HLEPENPGTYVLLSNIYAAKGM 606
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 8/259 (3%)
Query: 326 SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
+++ K D +I+ ++ A + +P + S++SLI K + +
Sbjct: 39 ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFT 98
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLI 444
+I +FS+M G PD H L ++ VC L +GKQ+H + + + D + S+
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
MY RCG +G+A VF+ M KDV+T +A++ YA G + + + +M+ I
Sbjct: 159 HMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
+++ +L+ +G +E F I+ G P +S + +G L LI+
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMG-RLIH 275
Query: 565 SMPVK----PDKAVWGALL 579
+K DK V A++
Sbjct: 276 GYVIKQGLLKDKCVISAMI 294
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 309/620 (49%), Gaps = 46/620 (7%)
Query: 54 EARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG 113
+AR F M R+ WNTL+ + ++ + F M + + N + CG
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 114 S-KFVEEGRKLF-----DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN 167
+ V G + D D +++I Y K GRM +AL++FD + + + V+ +
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 168 AVITGFLLNGDVDSAVGFFKRMPEC-----DSASLSALISGLVRNGELDMAAGILLECGD 222
++++GF NG AV FF+RM D +L L+S + ++ L C
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK-----LSNSRLGRCVH 186
Query: 223 G---DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
G G + + N+L+ Y +S +EA LF I ++V+SW+
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA-------------EKDVISWS 233
Query: 280 SMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEASK-----LFK 330
+++ CYV+ G A +F+ M E + ++ D+E+ K + K
Sbjct: 234 TVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK 293
Query: 331 EMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
+ + +S +++ + + + A F R+P+K+++SW +LI+G+ N +IE
Sbjct: 294 GLETEVKVS-TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEE 352
Query: 391 FSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYS 448
FS M LE +PD + VL C+ L L K H V K P I SL+ +YS
Sbjct: 353 FSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYS 412
Query: 449 RCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM-KRLKIHPTYITF 507
RCG++G A VFN + KD + W ++I GY HG ALE F M K ++ P +TF
Sbjct: 413 RCGSLGNASKVFNGIAL-KDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTF 471
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
+S+L+AC+HAGL+ EG R F M+NDY + P +EH+A VD+LGR G L A+++ MP
Sbjct: 472 LSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAER 627
P + G LLG+CR+H N E+A+ A+ L LE +G Y+L+ N+Y W++ E+
Sbjct: 532 FSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEK 591
Query: 628 VRVLMEEKNVKKQTGYSWVD 647
+R ++++ +KK S ++
Sbjct: 592 LRNSVKQRGIKKGLAESLIE 611
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 160/342 (46%), Gaps = 45/342 (13%)
Query: 287 KVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA----SKLFKEMPSPDALS--- 339
K V AR++F M +R WNT++ + EE S +F++ PD +
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 340 ------------WNSIISGFA---------------------QIGDLKVAKDFFERMPQK 366
+ +I GF + G + A F+ + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQM 425
++++W+S+++G++KN A+E F +M + + PDR TL +++S CT L + LG+ +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 426 HQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
H V + DL + NSL+ Y++ A EA +F +M KDVI+W+ +I Y +G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF-KMIAEKDVISWSTVIACYVQNGA 244
Query: 485 AVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
A +AL +F M P T + VL ACA A +E+GR+ I G+E V+
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVST 303
Query: 545 SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+ VD+ + +EA + + +P K D W AL+ ++G
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNG 344
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 201/481 (41%), Gaps = 39/481 (8%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIA 84
F K + S L+ + I I+ GR+ EA FD ++ + VTW++++SG K
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 144
Query: 85 KARQLFDEMPQRDIVSWN--LIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTV 138
+A + F M V+ + +I+ +C GR + + R D N++
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSL 204
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDS 194
++ YAK+ +A+ LF + E++ +S + VI ++ NG A+ F M E +
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 195 ASLSALISGLVRNGELDMAAGIL-LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRL 253
A++ ++ +L+ L G E + V+ L+ Y + EEA +
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE---VKVSTALVDMYMKCFSPEEAYAV 321
Query: 254 FDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM-----GERDTCA 308
F RIP R++VVSW +++ + G + E F M D
Sbjct: 322 FSRIP-------------RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 309 WNTMISGYVQISDMEEA----SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP 364
++ ++ +E+A S + K + S++ +++ G L A F +
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGK 423
K+ + W SLI GY + A+E F+ M E KP+ T S+LS C+ ++ G
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 424 QMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
++ +L+ + P+L L+ + R G + A + M F ++G
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRI 548
Query: 482 H 482
H
Sbjct: 549 H 549
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 178/455 (39%), Gaps = 76/455 (16%)
Query: 18 CSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWN-----T 72
C R + + ++ E + W+ +S + G +A FF M + VT + T
Sbjct: 109 CGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLIT 168
Query: 73 LISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEMPERD 131
L+S K R + + +R + +++ +C S+ +E LF + E+D
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKD 228
Query: 132 CVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVS---------------------- 165
+SW+TVI+ Y +NG +AL +F+ M E N +
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 166 -------------SNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG---- 208
S A++ ++ + A F R+P D S ALISG NG
Sbjct: 289 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
++ + +LLE + + D + L + G +E+A + F G
Sbjct: 349 SIEEFSIMLLE----NNTRPDAILMVKVL-GSCSELGFLEQA-KCFHSYVIKYG------ 396
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
F N S++ Y + G + +A ++F+ + +DT W ++I+GY +A +
Sbjct: 397 --FDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALET 454
Query: 329 FKEM-----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQ-----KNLISWNSLIAGY 378
F M P+ +++ SI+S + G + F+ M NL + L+
Sbjct: 455 FNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLL 514
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
+ D AIE+ +M P L ++L C
Sbjct: 515 GRVGDLDTAIEITKRMPF---SPTPQILGTLLGAC 546
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 208/345 (60%), Gaps = 2/345 (0%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
E D A N++I+ Y + + A LF +P PD +SWNS+I G+ + G + +A F +
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG 422
M +KN ISW ++I+GY + + K A++LF +MQ +PD +L++ LS C L L G
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 423 KQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
K +H + KT I D + LI MY++CG + EA VF +K K V W A+I GYA
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISGYAY 325
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
HG +A+ F +M+++ I P ITF +VL AC++ GLVEEG+ F SM DY ++P +E
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 542 HFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISL 601
H+ VD+LGR G L EA I MP+KP+ +WGALL +CR+H N+EL + + LI++
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 602 EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
+P G YV N++A + WD A R LM+E+ V K G S +
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 189/443 (42%), Gaps = 91/443 (20%)
Query: 87 RQLFDEMPQRDIVSWNLIISGYFSCC----GSKFVEEGRKLFDEMPERDCVSWNTVISGY 142
+Q+ M + ++ + I+ + S C S F+ + +FD D WN +I G+
Sbjct: 31 KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGF 90
Query: 143 AKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALIS 202
+ + +++L L+ M +A NA LL S + F+ ++ + A I+
Sbjct: 91 SCSDEPERSLLLYQRMLCSSA-PHNAYTFPSLLKAC--SNLSAFE-----ETTQIHAQIT 142
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
L G + V A N+LI Y +G + A LFDRIP
Sbjct: 143 KL---------------------GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 181
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
VSWNS++ YVK G + A LF M E++ +W TMISGYVQ
Sbjct: 182 -------------VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMN 228
Query: 323 EEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAK--------------------- 357
+EA +LF EM + PD +S + +S AQ+G L+ K
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 358 --------------DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
+ F+ + +K++ +W +LI+GY + + AI F +MQ G KP+
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 404 HTLSSVLSVC--TGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTV 459
T ++VL+ C TGLV+ GK + + + + P + ++ + R G + EA
Sbjct: 349 ITFTAVLTACSYTGLVE--EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 460 FNEMKFYKDVITWNAMIGGYASH 482
EM + + W A++ H
Sbjct: 407 IQEMPLKPNAVIWGALLKACRIH 429
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 28/325 (8%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM-----PQRDIVSWNLIIS 106
L A+ FD +T WN +I G E ++ L+ M P +L+
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLK- 123
Query: 107 GYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
+C EE ++ ++ E D + N++I+ YA G A LFD +PE +
Sbjct: 124 ---ACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGD 222
VS N+VI G++ G +D A+ F++M E ++ S + +ISG V+ +++ A L
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQ-ADMNKEALQLFHEMQ 239
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
+ + D V N L A Q G +E+ + + + + R R + V ++
Sbjct: 240 NSDVEPDNVSLANALSAC-AQLGALEQGKWIHSYL---------NKTRIRMDSVLGCVLI 289
Query: 283 MCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDAL 338
Y K G++ A E+F ++ ++ AW +ISGY EA F EM P+ +
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 339 SWNSIISGFAQIGDLKVAKDFFERM 363
++ ++++ + G ++ K F M
Sbjct: 350 TFTAVLTACSYTGLVEEGKLIFYSM 374
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 140/316 (44%), Gaps = 64/316 (20%)
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
+ D+ + N +I+ Y K LFD +PE D VSWN+VI GY K G+MD AL L
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKL---AHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 203
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGEL 210
F M E+NA+S +I+G++ A+ F M E D+ SL+ +S + G L
Sbjct: 204 FRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 211 -----------------DMAAGILL-----ECGDGDEG-------KHDLVQAYNTLIAGY 241
D G +L +CG+ +E K VQA+ LI+GY
Sbjct: 264 EQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
G EA F + Q G + NV+++ +++ G + + +F SM
Sbjct: 324 AYHGHGREAISKFMEM---QKMG------IKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 302 GERDTCAWNTMISGYVQISD-------MEEASKLFKEMP-SPDALSWNSIISGF------ 347
ERD T I Y I D ++EA + +EMP P+A+ W +++
Sbjct: 375 -ERDYNLKPT-IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 348 ---AQIGDLKVAKDFF 360
+IG++ +A D +
Sbjct: 433 ELGEEIGEILIAIDPY 448
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 36/279 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN I ++ G++ A T F M +N ++W T+ISG+V+ +A QLF EM D+
Sbjct: 184 WNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 99 VSWNLIISGYFSCCGS-KFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALK 153
N+ ++ S C +E+G+ + + + D V +I YAK G M++AL+
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECD--------SASLSAL-ISGL 204
+F + +++ + A+I+G+ +G A+ F M + +A L+A +GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
V G+L + + D ++ Y ++ G++G ++EA+R +P
Sbjct: 364 VEEGKL------IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP------ 411
Query: 265 KEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
+ N V W +++ K I EL + +GE
Sbjct: 412 ------LKPNAVIWGALL----KACRIHKNIELGEEIGE 440
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 35/267 (13%)
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
L A+ F+ + + WN +I G+ +++ + ++ L+ +M + +T S+L
Sbjct: 65 LPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKA 124
Query: 413 CTGLVDLYLGKQMHQLVTK-----------TVI---------------------PDLPIN 440
C+ L Q+H +TK ++I PD
Sbjct: 125 CSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSW 184
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
NS+I Y + G + A T+F +M K+ I+W MI GY + +AL+LF +M+ +
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMA-EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 501 HPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAM 560
P ++ + L+ACA G +E+G + +S +N I +D+ + G+++EA+
Sbjct: 244 EPDNVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 561 DLINSMPVKPDKAVWGALLGSCRVHGN 587
++ ++ K +A W AL+ HG+
Sbjct: 303 EVFKNIKKKSVQA-WTALISGYAYHGH 328
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 193/639 (30%), Positives = 323/639 (50%), Gaps = 60/639 (9%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G FD + RN V+WN+LIS + A + F M ++ + +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 108 YFSCCGSKFVEEGRKLFDEMP-------ERDCVSWNTVISGYAKNGRMDQALKLFDAMPE 160
+ C + + EG + ++ E + NT+++ Y K G++ + L +
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISG-----LVRNG-EL 210
R+ V+ N V++ N + A+ + + M E D ++S+++ ++R G EL
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
A L+ G DE + L+ Y +V RR+FD +
Sbjct: 325 HAYA---LKNGSLDENSF----VGSALVDMYCNCKQVLSGRRVFDGM------------- 364
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN-TMISGYVQIS------DME 323
F R + WN+M+ Y + A LF M E N T ++G V +
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 324 EASKLF--KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKN 381
EA F K D N+++ ++++G + +A F +M ++L++WN++I GY +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 382 EDYKGAIELFSQMQ-LEGE----------KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
E ++ A+ L +MQ LE + KP+ TL ++L C L L GK++H
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 431 KT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDAL 489
K + D+ + ++L+ MY++CG + + VF+++ K+VITWN +I Y HG +A+
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAI 603
Query: 490 ELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDI 549
+L + M + P +TFISV AC+H+G+V+EG R F M DYG+EP +H+A VD+
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 550 LGRQGQLQEAMDLINSMPVKPDKA-VWGALLGSCRVHGNVELAQVAAQALISLEPESSGP 608
LGR G+++EA L+N MP +KA W +LLG+ R+H N+E+ ++AAQ LI LEP +
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 723
Query: 609 YVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
YVLL N+Y++ LWD A VR M+E+ V+K+ G SW++
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 213/487 (43%), Gaps = 60/487 (12%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM-PECDS 194
NT+++ Y K G K+FD + ERN VS N++I+ + A+ F+ M E
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY------------NTLIAGYG 242
S L+S + L M G+++ GK V AY NTL+A YG
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMM-------GKQ--VHAYGLRKGELNSFIINTLVAMYG 247
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM- 301
+ GK+ ++ L G R++V+WN+++ + ++ A E M
Sbjct: 248 KLGKLASSKVLL-------------GSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 302 ---GERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISG-----FAQIGDL 353
E D ++++ + + +L +L NS + + +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 354 KVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE-GEKPDRHTLSSVLSV 412
+ F+ M + + WN++IAGY +NE K A+ LF M+ G + T++ V+
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 413 CTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT 471
C + +H V K + D + N+L+ MYSR G I A +F +M+ +D++T
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DRDLVT 473
Query: 472 WNAMIGGYASHGLAVDALELFKQMK-----------RLKIHPTYITFISVLNACAHAGLV 520
WN MI GY DAL L +M+ R+ + P IT +++L +CA +
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 521 EEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
+G+ I + + V ++ VD+ + G LQ + + + +P K + W ++
Sbjct: 534 AKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIM 591
Query: 581 SCRVHGN 587
+ +HGN
Sbjct: 592 AYGMHGN 598
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 47/373 (12%)
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKV 288
D V NTL+ Y + G ++FDRI RN VSWNS++
Sbjct: 131 DSVTVANTLVNLYRKCGDFGAVYKVFDRIS-------------ERNQVSWNSLISSLCSF 177
Query: 289 GDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSW-------- 340
A E F M + N S + +S + S L P P+ L
Sbjct: 178 EKWEMALEAFRCMLDE-----NVEPSSFTLVSVVTACSNL----PMPEGLMMGKQVHAYG 228
Query: 341 -----------NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
N++++ + ++G L +K ++L++WN++++ +NE A+E
Sbjct: 229 LRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMY 447
+M LEG +PD T+SSVL C+ L L GK++H K ++ + + ++L+ MY
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR-LKIHPTYIT 506
C + VF+ M F + + WNAMI GY+ + +AL LF M+ + T
Sbjct: 349 CNCKQVLSGRRVFDGM-FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 507 FISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM 566
V+ AC +G + + + G++ + +D+ R G++ AM + M
Sbjct: 408 MAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM 466
Query: 567 PVKPDKAVWGALL 579
+ D W ++
Sbjct: 467 EDR-DLVTWNTMI 478
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 305 DTCAWNTMISGYVQISDMEEASKL----FKEMPSPDALS-WNSIISGFAQIGDLKVAKDF 359
D A+ ++ + DME ++ +K D+++ N++++ + + GD
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV-- 417
F+R+ ++N +SWNSLI+ E ++ A+E F M E +P TL SV++ C+ L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 418 -DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
L +GKQ+H + + I N+L+ MY + G + + + +D++TWN ++
Sbjct: 216 EGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVL 274
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
+ ++ALE ++M + P T SVL AC+H ++ G+
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
W L+ ++ + A+ + M + G KPD + ++L L D+ LGKQ+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 431 K--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
K + + + N+L+ +Y +CG G VF+ + ++ ++WN++I S A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS-ERNQVSWNSLISSLCSFEKWEMA 183
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF-- 546
LE F+ M + P+ T +SV+ AC++ + E ++ YG+ R SF
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG--LMMGKQVHAYGL--RKGELNSFII 239
Query: 547 ---VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
V + G+ G+L + L+ S + D W +L S
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 235/423 (55%), Gaps = 24/423 (5%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N+LI+GY SG + A RLFD G ED ++VV+W +M+ +V+ G A
Sbjct: 142 NSLISGYSSSGLFDFASRLFD--------GAED-----KDVVTWTAMIDGFVRNGSASEA 188
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP---------SPDALSWNSIIS 345
F M + A + ++ + E + + + D +S++
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+ + A+ F+ MP +N+++W +LIAGY ++ + + +F +M P+ T
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMK 464
LSSVLS C + L+ G+++H + K I + +LI +Y +CG + EA VF +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 465 FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
K+V TW AMI G+A+HG A DA +LF M + P +TF++VL+ACAH GLVEEGR
Sbjct: 369 -EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Query: 525 RQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRV 584
R F SM + +EP+ +H+A VD+ GR+G L+EA LI MP++P VWGAL GSC +
Sbjct: 428 RLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLL 487
Query: 585 HGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
H + EL + AA +I L+P SG Y LL N+Y+ + WD+ RVR M+++ V K G+S
Sbjct: 488 HKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFS 547
Query: 645 WVD 647
W++
Sbjct: 548 WIE 550
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
+ D N++ISGY + AS+LF D ++W ++I GF
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFV-------------- 180
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG 422
+N A+ F +M+ G + T+ SVL + D+ G
Sbjct: 181 -----------------RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 423 KQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYA 480
+ +H L +T V D+ I +SL+ MY +C +A VF+EM ++V+TW A+I GY
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAGYV 282
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRV 540
+ +F++M + + P T SVL+ACAH G + GRR MI + IE
Sbjct: 283 QSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKN-SIEINT 341
Query: 541 EHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+ +D+ + G L+EA+ + + K + W A++ HG
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEK-NVYTWTAMINGFAAHG 386
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 168/368 (45%), Gaps = 42/368 (11%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECD-S 194
N++ISGY+ +G D A +LFD +++ V+ A+I GF+ NG A+ +F M + +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 195 ASLSALISGLVRNGELD------MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
A+ ++S L G+++ G+ LE G K D+ ++L+ YG+ +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG---RVKCDVFIG-SSLVDMYGKCSCYD 257
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC- 307
+A+++FD +P+ RNVV+W +++ YV+ +F+ M + D
Sbjct: 258 DAQKVFDEMPS-------------RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 308 ---AWNTMISGYVQISDMEEASK----LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
++++S + + + + K + + ++I + + G L+ A F
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 361 ERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLVD 418
ER+ +KN+ +W ++I G+ + + A +LF M P+ T +VLS C GLV+
Sbjct: 365 ERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVE 424
Query: 419 ----LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
L+L + + P ++ ++ R G + EA + M + W A
Sbjct: 425 EGRRLFLSMKGRF----NMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 475 MIGGYASH 482
+ G H
Sbjct: 481 LFGSCLLH 488
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 162/388 (41%), Gaps = 36/388 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N IS +G A FD + ++ VTW +I G V+ ++A F EM + +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 100 SWNLIISGYFSCCGS----KFVEEGRKLFDEMPERDCVSW--NTVISGYAKNGRMDQALK 153
+ + + G +F L+ E C + ++++ Y K D A K
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA----SLSALISGLVRNGE 209
+FD MP RN V+ A+I G++ + D + F+ M + D A +LS+++S G
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
L G + C A TLI Y + G +EEA +F+R+
Sbjct: 322 LH--RGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHE---------- 369
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEA 325
+NV +W +M+ + G A +LF +M + + ++S +EE
Sbjct: 370 ---KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 326 SKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYD 379
+LF M P A + ++ F + G L+ AK ERMP + + W +L
Sbjct: 427 RRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCL 486
Query: 380 KNEDYK-GAIELFSQMQLEGEKPDRHTL 406
++DY+ G ++L+ R+TL
Sbjct: 487 LHKDYELGKYAASRVIKLQPSHSGRYTL 514
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 305/566 (53%), Gaps = 34/566 (6%)
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
+D+ N ++ +++ CG ++ RK+FDEM ER+ VSW ++I GYA+ A+ LF
Sbjct: 167 KDLFVQNSLVH-FYAECGE--LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 156 DAMPERNAVSSNAVITGFLLNG-----DVDSA--VGFFKRMP--ECDSASLSALISGLVR 206
M V+ N+V +++ D+++ V F R E + +SAL+ ++
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+D+A + E G + + N + + Y + G EA +F+ + D G
Sbjct: 284 CNAIDVAKRLFDEYGASN------LDLCNAMASNYVRQGLTREALGVFN-LMMDSG---- 332
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAW----NTMISGYVQISDM 322
R + +S S + ++ +I+ + + +W N +I Y++
Sbjct: 333 ----VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 323 EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+ A ++F M + ++WNSI++G+ + G++ A + FE MP+KN++SWN++I+G +
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 383 DYKGAIELFSQMQ-LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPIN 440
++ AIE+F MQ EG D T+ S+ S C L L L K ++ + K I D+ +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
+L+ M+SRCG A ++FN + +DV W A IG A G A A+ELF M +
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 501 HPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAM 560
P + F+ L AC+H GLV++G+ F SM+ +G+ P H+ VD+LGR G L+EA+
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 561 DLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLE 620
LI MP++P+ +W +LL +CRV GNVE+A AA+ + L PE +G YVLL N+YA+
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 621 LWDDAERVRVLMEEKNVKKQTGYSWV 646
W+D +VR+ M+EK ++K G S +
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 219/501 (43%), Gaps = 77/501 (15%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N + G L AR FD M RN V+W ++I G+ +R A LF M + + V
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 100 SWNLI--ISGYFSCCGSKFVEEGRKLF----DEMPERDCVSWNTVISGYAKNGRMDQALK 153
+ N + + +C + +E G K++ + E + + + ++ Y K +D A +
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGL--VRN 207
LFD N NA+ + ++ G A+G F M + D S+ + IS +RN
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 208 GELDMAA-GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+ G +L +G E ++ N LI Y + + + A R+FDR+ N
Sbjct: 353 ILWGKSCHGYVLR--NGFESWDNIC---NALIDMYMKCHRQDTAFRIFDRMSN------- 400
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
+ VV+WNS++ YV+ G++ +A E F++M E++ +WNT+ISG VQ S EEA
Sbjct: 401 ------KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 327 KLFKEMPS-----PDALSWNSIISGFAQIGDLKVAK----------------------DF 359
++F M S D ++ SI S +G L +AK D
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 360 FER-------------MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
F R + +++ +W + I + + AIELF M +G KPD
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 407 SSVLSVCT--GLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNE 462
L+ C+ GLV GK++ + K V P+ ++ + R G + EA + +
Sbjct: 575 VGALTACSHGGLVQ--QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 463 MKFYKDVITWNAMIGGYASHG 483
M + + WN+++ G
Sbjct: 633 MPMEPNDVIWNSLLAACRVQG 653
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 189/441 (42%), Gaps = 102/441 (23%)
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPND-----------------QGDGKEDGRR------ 270
YN+LI GY SG EA LF R+ N + K +G +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 271 ---FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
+ +++ NS++ Y + G++ SAR++FD M ER+ +W +MI GY + ++A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 328 LFKEM-----PSPDALSWNSIISGFAQIGDLK---------------------------- 354
LF M +P++++ +IS A++ DL+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 355 -------VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS 407
VAK F+ NL N++ + Y + + A+ +F+ M G +PDR ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 408 SVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFY 466
S +S C+ L ++ GK H V + I N+LI MY +C A +F+ M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 467 KDVITWNAMIGGYASHG-------------------------------LAVDALELFKQM 495
K V+TWN+++ GY +G L +A+E+F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 496 KRLK-IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
+ + ++ +T +S+ +AC H G ++ + + I GI+ V + VD+ R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 555 QLQEAMDLINSMPVKPDKAVW 575
+ AM + NS+ + D + W
Sbjct: 520 DPESAMSIFNSLTNR-DVSAW 539
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 39/273 (14%)
Query: 353 LKVAKDFFERMPQ-KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
L AK+ FE +NSLI GY + AI LF +M G PD++T LS
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 412 VCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C G Q+H L+ K DL + NSL+ Y+ CG + A VF+EM ++V+
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVV 201
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKR-LKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+W +MI GYA A DA++LF +M R ++ P +T + V++ACA +E G + + +
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-A 260
Query: 530 MINDYGIE----------------------PRV--EHFASFVDILG-------RQGQLQE 558
I + GIE R+ E+ AS +D+ RQG +E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 559 AMDLINSM---PVKPDKAVWGALLGSCRVHGNV 588
A+ + N M V+PD+ + + SC N+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 33/280 (11%)
Query: 18 CSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGH 77
C R +F + + + WN ++ + G + A F++M +N V+WNT+ISG
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 78 VKRREIAKARQLFDEMPQRDIVSWN-LIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWN 136
V+ +A ++F M ++ V+ + + + S CG + K E++ + +
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 137 -----TVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE 191
T++ +++ G + A+ +F+++ R+ + A I + G+ + A+ F M E
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 192 C-----DSASLSALIS----GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
A + AL + GLV+ G+ ++ +L G E H Y ++ G
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGK-EIFYSMLKLHGVSPEDVH-----YGCMVDLLG 618
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
++G +EEA +L + +P + D V WNS++
Sbjct: 619 RAGLLEEAVQLIEDMPMEPND------------VIWNSLL 646
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 305/566 (53%), Gaps = 34/566 (6%)
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
+D+ N ++ +++ CG ++ RK+FDEM ER+ VSW ++I GYA+ A+ LF
Sbjct: 167 KDLFVQNSLVH-FYAECGE--LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLF 223
Query: 156 DAMPERNAVSSNAVITGFLLNG-----DVDSA--VGFFKRMP--ECDSASLSALISGLVR 206
M V+ N+V +++ D+++ V F R E + +SAL+ ++
Sbjct: 224 FRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK 283
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+D+A + E G + + N + + Y + G EA +F+ + D G
Sbjct: 284 CNAIDVAKRLFDEYGASN------LDLCNAMASNYVRQGLTREALGVFN-LMMDSG---- 332
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAW----NTMISGYVQISDM 322
R + +S S + ++ +I+ + + +W N +I Y++
Sbjct: 333 ----VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 323 EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+ A ++F M + ++WNSI++G+ + G++ A + FE MP+KN++SWN++I+G +
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 383 DYKGAIELFSQMQ-LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPIN 440
++ AIE+F MQ EG D T+ S+ S C L L L K ++ + K I D+ +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
+L+ M+SRCG A ++FN + +DV W A IG A G A A+ELF M +
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 501 HPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAM 560
P + F+ L AC+H GLV++G+ F SM+ +G+ P H+ VD+LGR G L+EA+
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 561 DLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLE 620
LI MP++P+ +W +LL +CRV GNVE+A AA+ + L PE +G YVLL N+YA+
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 621 LWDDAERVRVLMEEKNVKKQTGYSWV 646
W+D +VR+ M+EK ++K G S +
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 219/501 (43%), Gaps = 77/501 (15%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N + G L AR FD M RN V+W ++I G+ +R A LF M + + V
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 100 SWNLI--ISGYFSCCGSKFVEEGRKLF----DEMPERDCVSWNTVISGYAKNGRMDQALK 153
+ N + + +C + +E G K++ + E + + + ++ Y K +D A +
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGL--VRN 207
LFD N NA+ + ++ G A+G F M + D S+ + IS +RN
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 208 GELDMAA-GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+ G +L +G E ++ N LI Y + + + A R+FDR+ N
Sbjct: 353 ILWGKSCHGYVLR--NGFESWDNIC---NALIDMYMKCHRQDTAFRIFDRMSN------- 400
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
+ VV+WNS++ YV+ G++ +A E F++M E++ +WNT+ISG VQ S EEA
Sbjct: 401 ------KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 327 KLFKEMPS-----PDALSWNSIISGFAQIGDLKVAK----------------------DF 359
++F M S D ++ SI S +G L +AK D
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 360 FER-------------MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
F R + +++ +W + I + + AIELF M +G KPD
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 407 SSVLSVCT--GLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNE 462
L+ C+ GLV GK++ + K V P+ ++ + R G + EA + +
Sbjct: 575 VGALTACSHGGLVQ--QGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 463 MKFYKDVITWNAMIGGYASHG 483
M + + WN+++ G
Sbjct: 633 MPMEPNDVIWNSLLAACRVQG 653
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 189/441 (42%), Gaps = 102/441 (23%)
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPND-----------------QGDGKEDGRR------ 270
YN+LI GY SG EA LF R+ N + K +G +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 271 ---FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
+ +++ NS++ Y + G++ SAR++FD M ER+ +W +MI GY + ++A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 328 LFKEM-----PSPDALSWNSIISGFAQIGDLK---------------------------- 354
LF M +P++++ +IS A++ DL+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 355 -------VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS 407
VAK F+ NL N++ + Y + + A+ +F+ M G +PDR ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 408 SVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFY 466
S +S C+ L ++ GK H V + I N+LI MY +C A +F+ M
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS-N 400
Query: 467 KDVITWNAMIGGYASHG-------------------------------LAVDALELFKQM 495
K V+TWN+++ GY +G L +A+E+F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 496 KRLK-IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
+ + ++ +T +S+ +AC H G ++ + + I GI+ V + VD+ R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 555 QLQEAMDLINSMPVKPDKAVW 575
+ AM + NS+ + D + W
Sbjct: 520 DPESAMSIFNSLTNR-DVSAW 539
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 129/273 (47%), Gaps = 39/273 (14%)
Query: 353 LKVAKDFFERMPQ-KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
L AK+ FE +NSLI GY + AI LF +M G PD++T LS
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142
Query: 412 VCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C G Q+H L+ K DL + NSL+ Y+ CG + A VF+EM ++V+
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERNVV 201
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKR-LKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+W +MI GYA A DA++LF +M R ++ P +T + V++ACA +E G + + +
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY-A 260
Query: 530 MINDYGIE----------------------PRV--EHFASFVDILG-------RQGQLQE 558
I + GIE R+ E+ AS +D+ RQG +E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 559 AMDLINSM---PVKPDKAVWGALLGSCRVHGNV 588
A+ + N M V+PD+ + + SC N+
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 126/280 (45%), Gaps = 33/280 (11%)
Query: 18 CSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGH 77
C R +F + + + WN ++ + G + A F++M +N V+WNT+ISG
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 78 VKRREIAKARQLFDEMPQRDIVSWN-LIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWN 136
V+ +A ++F M ++ V+ + + + S CG + K E++ + +
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 137 -----TVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE 191
T++ +++ G + A+ +F+++ R+ + A I + G+ + A+ F M E
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIE 564
Query: 192 C-----DSASLSALIS----GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
A + AL + GLV+ G+ ++ +L G E H Y ++ G
Sbjct: 565 QGLKPDGVAFVGALTACSHGGLVQQGK-EIFYSMLKLHGVSPEDVH-----YGCMVDLLG 618
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
++G +EEA +L + +P + D V WNS++
Sbjct: 619 RAGLLEEAVQLIEDMPMEPND------------VIWNSLL 646
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 192/682 (28%), Positives = 326/682 (47%), Gaps = 89/682 (13%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
L A F ++ RN +W +I + A F EM + +I N ++
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 112 CG----SKF--------------------------------VEEGRKLFDEMPERDCVSW 135
CG S+F +++ K+FDE+P+R+ V+W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 136 NTVISGYAKNGRMDQALKLFDAM------PERNAVS---SNAVITGFLLNGDVDSAVGFF 186
N ++ GY +NG+ ++A++LF M P R VS S + G + G A+
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 187 KRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGK 246
M E D+ ++L++ + G ++ A + + D V +N +I+GY Q G
Sbjct: 303 NGM-ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKD------VVTWNLIISGYVQQGL 355
Query: 247 VEEARRLFD--RIPNDQGD-------------------GKEDG-----RRFRRNVVSWNS 280
VE+A + R+ + D GKE F ++V ++
Sbjct: 356 VEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAST 415
Query: 281 MMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPD 336
+M Y K G IV A+++FDS E+D WNT+++ Y + EA +LF M P+
Sbjct: 416 VMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPN 475
Query: 337 ALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFS 392
++WN II + G + AKD F +M NLISW +++ G +N + AI
Sbjct: 476 VITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD--LPINNSLITMYSRC 450
+MQ G +P+ +++ LS C L L++G+ +H + + + + I SL+ MY++C
Sbjct: 536 KMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKC 595
Query: 451 GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISV 510
G I +A VF K Y ++ NAMI YA +G +A+ L++ ++ + + P IT +V
Sbjct: 596 GDINKAEKVFGS-KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNV 654
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
L+AC HAG + + F +++ ++P +EH+ VD+L G+ ++A+ LI MP KP
Sbjct: 655 LSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKP 714
Query: 571 DKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
D + +L+ SC EL ++ L+ EPE+SG YV + N YA WD+ ++R
Sbjct: 715 DARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMRE 774
Query: 631 LMEEKNVKKQTGYSWVDSSNRQ 652
+M+ K +KK+ G SW+ + +
Sbjct: 775 MMKAKGLKKKPGCSWIQITGEE 796
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 152/651 (23%), Positives = 291/651 (44%), Gaps = 92/651 (14%)
Query: 12 QLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRN----T 67
++P ++ S+ + H + S +++ +S L + G + EA + M RN
Sbjct: 12 KVPFSVSSKPSSKHHDEQAHSPSSTSYFHR-VSSLCKNGEIKEALSLVTEMDFRNLRIGP 70
Query: 68 VTWNTLISGHVKRREIAKARQLF-------DEMPQRDIVSWNLIISGYFSCCGSKFVEEG 120
+ ++ G V R+++ +Q+ D + + + L+I +++ C + +E
Sbjct: 71 EIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVI--FYAKCDA--LEIA 126
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
LF ++ R+ SW +I + G + AL F M E N V+ +V
Sbjct: 127 EVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVP------NVC 180
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG 240
A G K + + G V G D V ++L
Sbjct: 181 KACGALKW------SRFGRGVHGYVVKS-----------------GLEDCVFVASSLADM 217
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
YG+ G +++A ++FD IP+ RN V+WN++M+ YV+ G A LF
Sbjct: 218 YGKCGVLDDASKVFDEIPD-------------RNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 301 MGER---------DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIG 351
M ++ TC + G V+ A + M + L S+++ + ++G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVG 323
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
++ A+ F+RM +K++++WN +I+GY + + AI + M+LE K D TL++++S
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 412 VCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
+L LGK++ + + D+ + ++++ MY++CG+I +A VF+ KD+I
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLI 442
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
WN ++ YA GL+ +AL LF M+ + P IT+ ++ + G V+E + F M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSC----- 582
GI P + + + ++ + + G +EA+ + M ++P+ L +C
Sbjct: 503 -QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 583 -----RVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERV 628
+HG + + + +L+S+E L +MYA + AE+V
Sbjct: 562 LHIGRTIHGYI-IRNLQHSSLVSIETS-------LVDMYAKCGDINKAEKV 604
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
WN I L+R G++ EA+ F M+ N ++W T+++G V+ +A +M
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 95 QRDIVSWNLIISGYFSCCGS-KFVEEGRK----LFDEMPERDCVSWNT-VISGYAKNGRM 148
+ + I+ S C + GR + + VS T ++ YAK G +
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDI 598
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGL 204
++A K+F + SNA+I+ + L G++ A+ ++ + + D+ +++ ++S
Sbjct: 599 NKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
G+++ A I + K L + Y ++ +G+ E+A RL + +P
Sbjct: 659 NHAGDINQAIEIFTDIVSKRSMKPCL-EHYGLMVDLLASAGETEKALRLIEEMP-----F 712
Query: 265 KEDGRRFRRNVVSWN 279
K D R + V S N
Sbjct: 713 KPDARMIQSLVASCN 727
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 253/450 (56%), Gaps = 50/450 (11%)
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
++G V EA+ +I +G +V N ++ Y K G + AR++FD M
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEG---------DVTLLNVLINAYSKCGFVELARQVFDGM 122
Query: 302 GERDTCAWNTMISGYVQISDMEEASKLFKEMPSP--------------------DALSW- 340
ER +WNTMI Y + EA +F EM + DAL
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK 182
Query: 341 ------------------NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+++ +A+ G +K A FE M K+ ++W+S++AGY +N+
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINN 441
+Y+ A+ L+ + Q + ++ TLSSV+ C+ L L GKQMH ++ K+ ++ + +
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
S + MY++CG++ E+ +F+E++ K++ WN +I G+A H + + LF++M++ +H
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P +TF S+L+ C H GLVEEGRR F M YG+ P V H++ VDILGR G L EA +
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLEL 621
LI S+P P ++WG+LL SCRV+ N+ELA+VAA+ L LEPE++G +VLL N+YA +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 622 WDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
W++ + R L+ + +VKK G SW+D ++
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDK 511
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 165/392 (42%), Gaps = 57/392 (14%)
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
D+ N++I+ Y C FVE R++FD M ER VSWNT+I Y +N +AL +F
Sbjct: 95 DVTLLNVLINAYSKC---GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA-- 214
M S I+ L V+ K++ C S ++ V LD+ A
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 215 GILLECGDGDEGKHDLVQ-AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
G++ + E D +++++AGY Q+ EEA L+ R +
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR---------MSLEQ 261
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGE----RDTCAWNTMISGYVQISDMEEASKLF 329
N + +S++ + ++ +++ + + + ++ + Y + + E+ +F
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 321
Query: 330 KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
E+ + WN+IISGFA+ K FE+M Q
Sbjct: 322 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ------------------------ 357
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKT--VIPDLPINNSLIT 445
+G P+ T SS+LSVC TGLV+ G++ +L+ T + P++ + ++
Sbjct: 358 -------DGMHPNEVTFSSLLSVCGHTGLVE--EGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 446 MYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
+ R G + EA + + F W +++
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 163/380 (42%), Gaps = 69/380 (18%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ + G + AR FD M R+ V+WNT+I + + R ++A +F EM
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISG-----YAKNGRMDQALKL 154
IS S CG K + + C+ N + YAK G + A+++
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE--------------CDSASLSAL 200
F++M ++++V+ ++++ G++ N + + A+ ++R C ++L+AL
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
Query: 201 ISG----------------LVRNGELDMAAGILLECGDGDEG-------KHDLVQAYNTL 237
I G V + +DM A +CG E + ++ +NT+
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYA----KCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
I+G+ + + +E LF+++ Q DG N V+++S++ G + R
Sbjct: 336 ISGFAKHARPKEVMILFEKM---QQDG------MHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Query: 298 FDSMGERDTCAWNTMISGYVQISD-------MEEASKLFKEMP-SPDALSWNSIISGFAQ 349
F M R T + + Y + D + EA +L K +P P A W S+++
Sbjct: 387 FKLM--RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRV 444
Query: 350 IGDLKV----AKDFFERMPQ 365
+L++ A+ FE P+
Sbjct: 445 YKNLELAEVAAEKLFELEPE 464
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 268/479 (55%), Gaps = 29/479 (6%)
Query: 171 TGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGE-LDMAAGILLECGDGDEGKHD 229
T L + D+D A F +MP+ + S + +I G + E + A L DE
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
+ +++ ++GK++E +++ G + G F + ++++ YV G
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQI-------HGLALKYG--FGGDEFVMSNLVRMYVMCG 177
Query: 290 DIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQ 349
+ AR LF Y I + + + + + WN +I G+ +
Sbjct: 178 FMKDARVLF-----------------YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMR 220
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
+GD K A+ F++M Q++++SWN++I+GY N +K A+E+F +M+ +P+ TL SV
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
L + L L LG+ +H + I D + ++LI MYS+CG I +A VF + ++
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP-REN 339
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
VITW+AMI G+A HG A DA++ F +M++ + P+ + +I++L AC+H GLVEEGRR F+
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
M++ G+EPR+EH+ VD+LGR G L EA + I +MP+KPD +W ALLG+CR+ GNV
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 589 ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
E+ + A L+ + P SG YV L NMYA+ W + +R+ M+EK+++K G S +D
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 196/450 (43%), Gaps = 60/450 (13%)
Query: 57 TFFDSMKHRNTVTWNTLI----SGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCC 112
F S + R+T+ ++ + + R++ A ++F++MPQR+ SWN II G+
Sbjct: 45 VFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESD 104
Query: 113 GSKFVEEGRKLF----DEMPERDCVSWNTVISGYAKNGRMDQ-----ALKLFDAMPERNA 163
K + + DE E + ++ +V+ AK G++ + L L
Sbjct: 105 EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEF 164
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDG 223
V SN V + D+ V F+K + E D + + R+GE+ +
Sbjct: 165 VMSNLVRMYVMCGFMKDARVLFYKNIIEKD---MVVMTDRRKRDGEIVL----------- 210
Query: 224 DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMM 283
+N +I GY + G + AR LFD++ +R+VVSWN+M+
Sbjct: 211 ----------WNVMIDGYMRLGDCKAARMLFDKMR-------------QRSVVSWNTMIS 247
Query: 284 CYVKVGDIVSARELFDSMGERDTCA-WNTMISGYVQIS-----DMEEASKLFKEMPS--P 335
Y G A E+F M + D + T++S IS ++ E L+ E
Sbjct: 248 GYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI 307
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
D + +++I +++ G ++ A FER+P++N+I+W+++I G+ + AI+ F +M+
Sbjct: 308 DDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 367
Query: 396 LEGEKPDRHTLSSVLSVCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAI 453
G +P ++L+ C+ GLV+ + + P + ++ + R G +
Sbjct: 368 QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLL 427
Query: 454 GEACTVFNEMKFYKDVITWNAMIGGYASHG 483
EA M D + W A++G G
Sbjct: 428 DEAEEFILNMPIKPDDVIWKALLGACRMQG 457
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 161/393 (40%), Gaps = 82/393 (20%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAK--ARQLFDEMPQRDIVSWNLII--SG 107
L A F+ M RN +WNT+I G + E A LF EM + V N S
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 108 YFSCCGSKFVEEGRKL------------------------------------FDEMPERD 131
+C + ++EG+++ + + E+D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 132 CVS-------------WNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGD 178
V WN +I GY + G A LFD M +R+ VS N +I+G+ LNG
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 179 VDSAVGFFKRMPECD----SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY 234
AV F+ M + D +L +++ + R G L++ + L D D++ +
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS- 313
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
LI Y + G +E+A +F+R+P R NV++W++M+ + G A
Sbjct: 314 -ALIDMYSKCGIIEKAIHVFERLP-------------RENVITWSAMINGFAIHGQAGDA 359
Query: 295 RELFDSM---GERDT-CAWNTMISGYVQISDMEEASKLFKEMPSPDALS-----WNSIIS 345
+ F M G R + A+ +++ +EE + F +M S D L + ++
Sbjct: 360 IDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVD 419
Query: 346 GFAQIGDLKVAKDFFERMPQK-NLISWNSLIAG 377
+ G L A++F MP K + + W +L+
Sbjct: 420 LLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN I +R G AR FD M+ R+ V+WNT+ISG+ A ++F EM + DI
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 99 -VSWNLIIS--GYFSCCGSKFVEEGRKLF--DEMPERDCVSWNTVISGYAKNGRMDQALK 153
++ ++S S GS + E L+ D D V + +I Y+K G +++A+
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC-----DSASLSALIS----GL 204
+F+ +P N ++ +A+I GF ++G A+ F +M + D A ++ L + GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
V G + + + DG E + ++ Y ++ G+SG ++EA +P
Sbjct: 391 VEEGRRYFSQMVSV---DGLEPR---IEHYGCMVDLLGRSGLLDEAEEFILNMP 438
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 144/313 (46%), Gaps = 25/313 (7%)
Query: 68 VTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM 127
V WN +I G+++ + AR LFD+M QR +VSWN +ISGY S G F ++ ++F EM
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY-SLNG--FFKDAVEVFREM 265
Query: 128 PERDC----VSWNTVISGYAKNGRMD--QALKLF--DAMPERNAVSSNAVITGFLLNGDV 179
+ D V+ +V+ ++ G ++ + L L+ D+ + V +A+I + G +
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGII 325
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
+ A+ F+R+P + + SA+I+G +G+ A C G AY L+
Sbjct: 326 EKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCF--CKMRQAGVRPSDVAYINLLT 383
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
G VEE RR F ++ + G + + M+ + G + A E
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDG--------LEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 300 SMGER-DTCAWNTMISGYVQISDME---EASKLFKEMPSPDALSWNSIISGFAQIGDLKV 355
+M + D W ++ ++E + + +M D+ ++ ++ + +A G+
Sbjct: 436 NMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 356 AKDFFERMPQKNL 368
+ RM +K++
Sbjct: 496 VSEMRLRMKEKDI 508
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/655 (31%), Positives = 324/655 (49%), Gaps = 94/655 (14%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER 130
NTL+S + + +A ++ FDE+ + D+ SW ++S F +E ++FD+MPER
Sbjct: 96 NTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD---IEYAFEVFDKMPER 152
Query: 131 DCVS-WNTVISGYAKNGRMDQALKLFDAMPE---RNAVSSNAVITGFLLNGDVDSA---- 182
D V+ WN +I+G ++G + +++LF M + R+ A I G +D
Sbjct: 153 DDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVH 212
Query: 183 -----VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
GFF S+ ++ALI+ + N ++ + A ++ E + D D V +N +
Sbjct: 213 SLVIKAGFF-----IASSVVNALIT-MYFNCQVVVDACLVFE--ETDVAVRDQV-TFNVV 263
Query: 238 IAGYGQSGKVEEARRLFDRI------PND-----------------QGDGKEDGRRFRRN 274
I G K +E+ +F ++ P D Q G + +
Sbjct: 264 IDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKY 322
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP- 333
+ N+ M Y D +A ++F+S+ E+D WNTMIS Y Q + A ++K M
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 334 ---SPDALSW--------------------------------NSIISGFAQIGDLKVAKD 358
PD ++ N++IS +++ G ++ A
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADL 442
Query: 359 FFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK---PDRHTLSSVLSVCTG 415
FER +KNLISWN++I+G+ N +E FS + LE E PD +TLS++LS+C
Sbjct: 443 LFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCL-LESEVRILPDAYTLSTLLSICVS 501
Query: 416 LVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
L LG Q H V + + I N+LI MYS+CG I + VFN+M KDV++WN+
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNS 560
Query: 475 MIGGYASHGLAVDALELFKQMK-RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
+I Y+ HG +A+ +K M+ K+ P TF +VL+AC+HAGLVEEG FNSM+
Sbjct: 561 LISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEF 620
Query: 534 YGIEPRVEHFASFVDILGRQGQLQEAMDL--INSMPVKPDKAVWGALLGSCRVHGNVELA 591
+G+ V+HF+ VD+LGR G L EA L I+ + VW AL +C HG+++L
Sbjct: 621 HGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLG 680
Query: 592 QVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
++ A+ L+ E + YV L N+YA +W +AE R + KQ G SW+
Sbjct: 681 KMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 199/465 (42%), Gaps = 82/465 (17%)
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPECD-------SASLSALISGLVRNGELDMAAGILLE 219
N +TG +G+ +A+ F + C S SL+ + +R D G +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLR----DTIFGGQVH 80
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
C G NTL++ Y + G + ++ FD I D+ D V SW
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEI--DEPD-----------VYSWT 127
Query: 280 SMMMCYVKVGDIVSARELFDSMGERDTCA-WNTMISGYVQISDMEEASKLFKEMPS---- 334
+++ K+GDI A E+FD M ERD A WN MI+G + E + +LF+EM
Sbjct: 128 TLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR 187
Query: 335 PDALSWNSIIS-------GFA-QIGDLKVAKDFF-------------------------- 360
D + +I+S F Q+ L + FF
Sbjct: 188 HDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 361 --ERMPQKNLISWNSLI---AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
+ ++ +++N +I AG+ ++E ++ +F +M +P T SV+ C+
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKRDE----SLLVFRKMLEASLRPTDLTFVSVMGSCSC 303
Query: 416 LVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
+G Q+H L KT ++N+ +TMYS G A VF ++ KD++TWN
Sbjct: 304 AA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLE-EKDLVTWNT 359
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
MI Y L A+ ++K+M + + P TF S+L ++E + I +
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKF 415
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
G+ ++E + + + GQ+++A DL+ ++ + W A++
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAII 459
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 194/634 (30%), Positives = 316/634 (49%), Gaps = 48/634 (7%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
++SLL+ + KK G ++ A+ FD M R+TV WN LI G+ + A +LF
Sbjct: 88 KTSLLNLYLKK-------GCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFI 140
Query: 92 EMPQRDIVSWNLIISGYFSCCG-SKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNG 146
M Q+ + CG FV +GR + E D N +IS Y+K
Sbjct: 141 VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALIS 202
+ A LF M +++ VS N +I + +G + A+ FK M E ++ L+S
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
V + L ++++CG ++ + +L+ Y + G + A RL+
Sbjct: 261 AHVSHEPLHC---LVVKCGMVND-----ISVVTSLVCAYSRCGCLVSAERLY-------A 305
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQ 318
K+D ++V S++ CY + GD+ A F + D A ++ G +
Sbjct: 306 SAKQD------SIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 319 ISDMEEASKL----FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
S ++ L K L N +I+ +++ D++ FE++ + LISWNS+
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEK-PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTV 433
I+G ++ A E+F QM L G PD T++S+L+ C+ L L LGK++H +
Sbjct: 420 ISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNN 479
Query: 434 IPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF 492
+ + +LI MY++CG +A +VF +K TWN+MI GY+ GL AL +
Sbjct: 480 FENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSGLQHRALSCY 538
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
+M+ + P ITF+ VL+AC H G V+EG+ F +MI ++GI P ++H+A V +LGR
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 553 QGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLL 612
EA+ LI M +KPD AVWGALL +C +H +E+ + A+ + L+ ++ G YVL+
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLM 658
Query: 613 YNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
N+YA +WDD RVR +M++ G S +
Sbjct: 659 SNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 207/727 (28%), Positives = 334/727 (45%), Gaps = 121/727 (16%)
Query: 43 ISHLIRTGRLSEARTFFDS-------MKHRNTVTWNTLISGHVKRREIAKARQLFDEM-- 93
++ ++ G L A FD + R+ WN++I G+ K R + F M
Sbjct: 102 VNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLV 161
Query: 94 --PQRDIVSWNLIISGYFSCCGSKFV-EEGRKLFDEMP----ERDCVSWNTVISGYAKNG 146
+ D S ++++S C F EEG+++ M + D +I Y K G
Sbjct: 162 FGVRPDAFSLSIVVS--VMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFG 219
Query: 147 RMDQALKLFDAMPER-NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLV 205
A ++F + ++ N V N +I GF +G +S++ + +S +G +
Sbjct: 220 LSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL 279
Query: 206 RNGELDMAAGI--LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI------ 257
+G + C G H+ +L++ Y + G V EA +F +
Sbjct: 280 GACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLE 339
Query: 258 ----------PNDQGDGKEDGRRFRR------------NVVSW----------------- 278
ND G D F R NV+S
Sbjct: 340 IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 279 ------------NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
++++ Y K G A +F SM E+D AW ++ISG + +EA
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 327 KLFKEM--------PSPDALS---------------------------------WNSIIS 345
K+F +M P D ++ +S+I
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLID 519
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+++ G ++A F M +N+++WNS+I+ Y +N + +I+LF+ M +G PD +
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVS 579
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMK 464
++SVL + L GK +H + IP D + N+LI MY +CG A +F +M+
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 465 FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
+K +ITWN MI GY SHG + AL LF +MK+ P +TF+S+++AC H+G VEEG+
Sbjct: 640 -HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGK 698
Query: 525 RQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRV 584
F M DYGIEP +EH+A+ VD+LGR G L+EA I +MP++ D ++W LL + R
Sbjct: 699 NIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRT 758
Query: 585 HGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
H NVEL ++A+ L+ +EPE YV L N+Y L ++A ++ LM+EK + KQ G S
Sbjct: 759 HHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Query: 645 WVDSSNR 651
W++ S+R
Sbjct: 819 WIEVSDR 825
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 142/598 (23%), Positives = 241/598 (40%), Gaps = 119/598 (19%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQ-------RDIVSWNLIISGYFSCCGSKF--VEEGR 121
+L++ +VK + A Q+FD Q RD+ WN +I GYF KF +EG
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYF-----KFRRFKEGV 153
Query: 122 KLFDEM----PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG 177
F M D S + V+S K G + I GF+L
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR--------------EEGKQIHGFMLRN 199
Query: 178 DVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
+D+ DS +ALI + G A + +E D V +N +
Sbjct: 200 SLDT-----------DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSN-----VVLWNVM 243
Query: 238 IAGYGQSGKVEEARRLFDRIPND-----------------QGDGKEDGRRFRRNVVSW-- 278
I G+G SG E + L+ N+ Q + GR+ +VV
Sbjct: 244 IVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGL 303
Query: 279 -------NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKE 331
S++ Y K G + A +F + ++ WN M++ Y + A LF
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 332 MPS----PDALSWNSIISGFAQIGDLKVAKD----------------------------- 358
M PD+ + +++IS + +G K
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 359 ------FFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE--KPDRHTLSSVL 410
F+ M +K++++W SLI+G KN +K A+++F M+ + + KPD ++SV
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 411 SVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDV 469
+ C GL L G Q+H + KT ++ ++ + +SLI +YS+CG A VF M +++
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENM 542
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+ WN+MI Y+ + L +++LF M I P ++ SVL A + + +G+
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
+ GI + +D+ + G + A ++ M K W ++ HG+
Sbjct: 603 TLR-LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGD 658
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 215/476 (45%), Gaps = 40/476 (8%)
Query: 136 NTVISGYAKNGRMDQALKLFDA-------MPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
++++ Y K G +D A+++FD + R+ N++I G+ VG F+R
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 189 M----PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT-LIAGYGQ 243
M D+ SLS ++S + + G G + G D T LI Y +
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIH-GFMLRNSLDTDSFLKTALIDMYFK 217
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
G +A R+F I + + NVV WN M++ + G S+ +L+
Sbjct: 218 FGLSIDAWRVFVEIED------------KSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 304 RDTCAWNTMISGYVQISDMEEASKLFKEMPSP--------DALSWNSIISGFAQIGDLKV 355
+T +G + E S +++ D S++S +++ G +
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
A+ F + K L WN+++A Y +N+ A++LF M+ + PD TLS+V+S C+
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 416 LVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
L GK +H +L + + I ++L+T+YS+CG +A VF M+ KD++ W +
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGS 444
Query: 475 MIGGYASHGLAVDALELFKQMK--RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIN 532
+I G +G +AL++F MK + P SV NACA + G + SMI
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 533 DYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
G+ V +S +D+ + G + A+ + SM + + W +++ SC N+
Sbjct: 505 T-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMI-SCYSRNNL 557
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 159/367 (43%), Gaps = 58/367 (15%)
Query: 26 HKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAK 85
T+ ES+LL ++K G +A F SM+ ++ V W +LISG K + +
Sbjct: 405 QSTSTIESALLTLYSK-------CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKE 457
Query: 86 ARQLFDEM--------PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV---- 133
A ++F +M P DI++ S +C G + + G ++ M + V
Sbjct: 458 ALKVFGDMKDDDDSLKPDSDIMT-----SVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 134 SWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE-- 191
+++I Y+K G + ALK+F +M N V+ N++I+ + N + ++ F M
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 192 --CDSASLSALISGLVRNGEL---DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGK 246
DS S+++++ + L G L G + N LI Y + G
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSD-----THLKNALIDMYVKCGF 627
Query: 247 VEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GE 303
+ A +F ++ + +++++WN M+ Y GD ++A LFD M GE
Sbjct: 628 SKYAENIFKKMQH-------------KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 304 R-DTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLKVAK 357
D + ++IS +EE +F+ M P+ + +++ + G L+ A
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAY 734
Query: 358 DFFERMP 364
F + MP
Sbjct: 735 SFIKAMP 741
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 14/176 (7%)
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP---DRHTLSSVLSVCTGLVDLYLGKQMH 426
S NS I + +Y A+ L+S+ +G P T S+L C+ L +L GK +H
Sbjct: 26 SINSGIRALIQKGEYLQALHLYSKH--DGSSPFWTSVFTFPSLLKACSALTNLSYGKTIH 83
Query: 427 -QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK------FYKDVITWNAMIGGY 479
+V D I SL+ MY +CG + A VF+ +DV WN+MI GY
Sbjct: 84 GSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY 143
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV--EEGRRQFNSMIND 533
+ + F++M + P + V++ G EEG++ M+ +
Sbjct: 144 FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 194/636 (30%), Positives = 318/636 (50%), Gaps = 74/636 (11%)
Query: 43 ISHLIRTGRLSEARTFFDSMKH---RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
IS R G L +AR F+++ + WN+++ +V A +L+ M QR +
Sbjct: 96 ISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLT 155
Query: 100 SWNLIIS---------GYFSCC---GSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGR 147
I+ G F C ++ ++ G K + N +++ Y K GR
Sbjct: 156 GDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLK-------ENLHVVNELLTLYPKAGR 208
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRN 207
M A LF MP RN +S N +I GF D +SAV F+ M
Sbjct: 209 MGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR---------------- 252
Query: 208 GELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD--RIPNDQGDGK 265
+E K D V + ++++ + Q GK E+ + F R+ + G+
Sbjct: 253 ----------------EEFKPDEV-TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA 325
F +V + + KV V + + R N +I Y + +++A
Sbjct: 296 ALAVFF--SVCAELEALSIAEKVHGYVIKGGFEEYLPSR-----NALIHVYGKQGKVKDA 348
Query: 326 SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQ--------KNLISWNSLIAG 377
LF+++ + SWNS+I+ F G L A F + + N+++W S+I G
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG 408
Query: 378 YDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD- 436
+ ++E F QMQ + T+ +LS+C L L LG+++H V +T + +
Sbjct: 409 CNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSEN 468
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
+ + N+L+ MY++CG + E VF ++ KD+I+WN++I GY HG A AL +F +M
Sbjct: 469 ILVQNALVNMYAKCGLLSEGSLVFEAIR-DKDLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 497 RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQL 556
HP I ++VL+AC+HAGLVE+GR F SM +G+EP+ EH+A VD+LGR G L
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFL 587
Query: 557 QEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMY 616
+EA +++ +MP++P V GALL SCR+H NV++A+ A L LEPE +G Y+LL N+Y
Sbjct: 588 KEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIY 647
Query: 617 ANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNRQ 652
+ W+++ VR L ++K++KK +G SW++ ++
Sbjct: 648 SAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKK 683
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 196/499 (39%), Gaps = 127/499 (25%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
LH N+ ++ + GR+ +A F M RN ++WN +I G + + A ++F+ M +
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
+ + D V+W +V+S +++ G+ + LK F
Sbjct: 253 EEF------------------------------KPDEVTWTSVLSCHSQCGKFEDVLKYF 282
Query: 156 DAMP-ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
M NAVS A+ FF E ++ S++ + G V G
Sbjct: 283 HLMRMSGNAVSGEALAV-------------FFSVCAELEALSIAEKVHGYVIKG------ 323
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
G + + + N LI YG+ GKV++A LF +I N +
Sbjct: 324 -----------GFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN-------------KG 359
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGE--------RDTCAWNTMISGYVQISDMEEAS 326
+ SWNS++ +V G + A LF + E + W ++I G +++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 327 KLFKEMP---------------------------------------SPDALSWNSIISGF 347
+ F++M S + L N++++ +
Sbjct: 420 EYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMY 479
Query: 348 AQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS 407
A+ G L FE + K+LISWNS+I GY + + A+ +F +M G PD L
Sbjct: 480 AKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALV 539
Query: 408 SVLSVCT--GLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEM 463
+VLS C+ GLV+ G+++ ++K + P ++ + R G + EA + M
Sbjct: 540 AVLSACSHAGLVE--KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Query: 464 KFYKDVITWNAMIGGYASH 482
V A++ H
Sbjct: 598 PMEPKVCVLGALLNSCRMH 616
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 342 SIISGFAQIGDLKVAKDFFERMPQ---KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
++IS +A++G L A++ FE + +L WNS++ + Y+ A+EL+ M+ G
Sbjct: 94 NLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRG 153
Query: 399 EKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
D + L +L C L L + H Q++ + +L + N L+T+Y + G +G+A
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 458 TVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHA 517
+F EM ++ ++WN MI G++ A+++F+ M+R + P +T+ SVL+ +
Sbjct: 214 NLFVEMPV-RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 518 GLVEEGRRQFNSM 530
G E+ + F+ M
Sbjct: 273 GKFEDVLKYFHLM 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 15/183 (8%)
Query: 404 HTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDL-----PINNSLITMYSRCGAIGEACT 458
H +L +C +Q Q+ + ++ D + +LI++Y+R G + +A
Sbjct: 57 HYFDHLLGLCLT------AQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARN 110
Query: 459 VFN--EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAH 516
VF + D+ WN+++ SHGL +ALEL++ M++ + +L AC +
Sbjct: 111 VFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRY 170
Query: 517 AGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWG 576
G R F++ + G++ + + + + G++ +A +L MPV+ ++ W
Sbjct: 171 LGRFGLC-RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR-NRMSWN 228
Query: 577 ALL 579
++
Sbjct: 229 VMI 231
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 235/389 (60%), Gaps = 12/389 (3%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMG-----ERDTCAWNTMISGYVQISDMEEASKL 328
NV WN+++ Y ++G+ +SA L+ M E DT + +I ++D+ +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 329 FKEMPSPDALSW----NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDY 384
+ S NS++ +A GD+ A F++MP+K+L++WNS+I G+ +N
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 385 KGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSL 443
+ A+ L+++M +G KPD T+ S+LS C + L LGK++H + K + +L +N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHP 502
+ +Y+RCG + EA T+F+EM K+ ++W ++I G A +G +A+ELFK M+ + + P
Sbjct: 264 LDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
ITF+ +L AC+H G+V+EG F M +Y IEPR+EHF VD+L R GQ+++A +
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 563 INSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELW 622
I SMP++P+ +W LLG+C VHG+ +LA+ A ++ LEP SG YVLL NMYA+ + W
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 442
Query: 623 DDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
D +++R M VKK G+S V+ NR
Sbjct: 443 SDVQKIRKQMLRDGVKKVPGHSLVEVGNR 471
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 55/382 (14%)
Query: 52 LSEARTFFDSM-KHRNTVTWNTLISGHVKRREIAKARQLFDEM-----PQRDIVSWNLII 105
+S A F + K N WNTLI G+ + A L+ EM + D ++ +I
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 106 SGYFSCCGSKFVEEGRKLFDEMPERDCVS-WNTVISGYAKNGRMDQALKLFDAMPERNAV 164
+ + E + + N+++ YA G + A K+FD MPE++ V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 165 SSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGI---L 217
+ N+VI GF NG + A+ + M + D ++ +L+S + G L + + +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 218 LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
++ G + + N L+ Y + G+VEEA+ LFD + + +N VS
Sbjct: 249 IKVGLTRN-----LHSSNVLLDLYARCGRVEEAKTLFDEMVD-------------KNSVS 290
Query: 278 WNSMMMCYVKVGDIVSARELFDSM--------------GERDTCAWNTMIS-GYVQISDM 322
W S+++ G A ELF M G C+ M+ G+ M
Sbjct: 291 WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
Query: 323 EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKN 381
E K+ P + ++ A+ G +K A ++ + MP Q N++ W +L+ +
Sbjct: 351 REEYKI-----EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 405
Query: 382 EDYKGAIELFSQMQLEGEKPDR 403
D + F+++Q+ +P+
Sbjct: 406 GD--SDLAEFARIQILQLEPNH 425
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 34 SLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM 93
SL++ N + G ++ A FD M ++ V WN++I+G + + +A L+ EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 94 PQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRM 148
+ I I S C + G+++ M + R+ S N ++ YA+ GR+
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
++A LFD M ++N+VS ++I G +NG A+ FK M
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
LH N + R GR+ EA+T FD M +N+V+W +LI G +A +LF M
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 96 RD-IVSWNLIISG-YFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRM 148
+ ++ + G ++C V+EG + F M E + + ++ A+ G++
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 149 DQALKLFDAMP-ERNAVSSNAVITGFLLNGDVDSA 182
+A + +MP + N V ++ ++GD D A
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 241/426 (56%), Gaps = 21/426 (4%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
LI+ Y + G V +AR++F+ P + V +N+++ Y + A
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSS-----------QLSVCYNALISGYTANSKVTDA 140
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS--------PDALSWNSIISG 346
+F M E + + G V + + E L + + + NS I+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+ + G ++ + F+ MP K LI+WN++I+GY +N +EL+ QM+ G PD TL
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 407 SSVLSVCTGLVDLYLGKQMHQLV-TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
SVLS C L +G ++ +LV + +P++ ++N+ I+MY+RCG + +A VF+ M
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
K +++W AMIG Y HG+ L LF M + I P F+ VL+AC+H+GL ++G
Sbjct: 321 -KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
F +M +Y +EP EH++ VD+LGR G+L EAM+ I SMPV+PD AVWGALLG+C++H
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 586 GNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
NV++A++A +I EP + G YVL+ N+Y++ + + R+RV+M E+ +K+ GYS+
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 646 VDSSNR 651
V+ R
Sbjct: 500 VEHKGR 505
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 192/452 (42%), Gaps = 44/452 (9%)
Query: 83 IAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS----WNTV 138
I+ R + D S+ I+ SC G++L + + C + +
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILK---SCASLSLPVSGQQLHCHVTKGGCETEPFVLTAL 94
Query: 139 ISGYAKNGRMDQALKLFDAMPERN--AVSSNAVITGFLLNGDVDSAVGFFKRMPE----C 192
IS Y K G + A K+F+ P+ + +V NA+I+G+ N V A F+RM E
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
DS ++ L+ L + + +C G G V N+ I Y + G VE RR
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG--GLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC----A 308
LFD +P + +++WN+++ Y + G EL++ M C
Sbjct: 213 LFDEMP-------------VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 309 WNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMP 364
+++S + + ++ K + S P+ N+ IS +A+ G+L A+ F+ MP
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVD--LY 420
K+L+SW ++I Y + + + LF M G +PD VLS C +GL D L
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 421 LGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYA 480
L + M + + P + L+ + R G + EA M D W A++G
Sbjct: 380 LFRAMKR--EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
H VD EL K ++ P I + +++
Sbjct: 438 IHK-NVDMAEL-AFAKVIEFEPNNIGYYVLMS 467
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 158/360 (43%), Gaps = 44/360 (12%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRN--TVTWNTLISGHVKRREIAKARQLFDEMPQRDIVS 100
IS + G +++AR F+ + +V +N LISG+ ++ A +F M + +
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 101 WNLIISGYFSCCG-SKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLF 155
++ + G C +++ GR L + + + N+ I+ Y K G ++ +LF
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNG--E 209
D MP + ++ NAVI+G+ NG + +++M D +L +++S G +
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
+ G L+E G V N I+ Y + G + +AR +FD +P
Sbjct: 275 IGHEVGKLVE----SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP----------- 319
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEA 325
+++VSW +M+ CY G LFD M +R D + ++S ++
Sbjct: 320 --VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 326 SKLFKEM-------PSPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAG 377
+LF+ M P P+ ++ ++ + G L A +F E MP + + W +L+
Sbjct: 378 LELFRAMKREYKLEPGPE--HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
WN + + +I L+ M G PD + +L C L G+Q+H VT
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 431 KTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDV-ITWNAMIGGYASHGLAVDA 488
K P + +LI+MY +CG + +A VF E + + +NA+I GY ++ DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
+F++MK + +T + ++ C + GR + G++ V SF+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLDSEVAVLNSFIT 199
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ + G ++ L + MPVK W A++
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVK-GLITWNAVI 229
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 30 DNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQL 89
D+E ++L N I+ ++ G + R FD M + +TWN +ISG+ + +L
Sbjct: 188 DSEVAVL---NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLEL 244
Query: 90 FDEMPQRDIVSWNLIISGYFSCC---GSKFV--EEGRKLFDEMPERDCVSWNTVISGYAK 144
+++M + + S C G+K + E G+ + + N IS YA+
Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 145 NGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF----KRMPECDSASLSAL 200
G + +A +FD MP ++ VS A+I + ++G + + F KR D A +
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGKHDL---VQAYNTLIAGYGQSGKVEEARRLFDRI 257
+S +G D LE + ++ L + Y+ L+ G++G+++EA + +
Sbjct: 365 LSACSHSGLTDKG----LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESM 420
Query: 258 P 258
P
Sbjct: 421 P 421
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 275 bits (702), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 283/523 (54%), Gaps = 58/523 (11%)
Query: 138 VISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASL 197
+++ Y + G++ A K+FD MP+R+ +I NG ++ FF+ M + D L
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYK-DGLKL 115
Query: 198 SALI-SGLVRNGE--LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
A I L++ LD G ++ C LV ++
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHC---------LVLKFS------------------- 147
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
+ + +S++ Y K G++ +AR++F +GE+D +N MIS
Sbjct: 148 ----------------YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 315 GYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP----QK 366
GY S +EA L K+M PD ++WN++ISGF+ + + + + E M +
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKP 251
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
+++SW S+I+G N + A + F QM G P+ T+ ++L CT L + GK++H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 427 QLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
T + D + ++L+ MY +CG I EA +F + K +T+N+MI YA+HGLA
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP-KKTTVTFNSMIFCYANHGLA 370
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
A+ELF QM+ ++TF ++L AC+HAGL + G+ F M N Y I PR+EH+A
Sbjct: 371 DKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYAC 430
Query: 546 FVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPES 605
VD+LGR G+L EA ++I +M ++PD VWGALL +CR HGN+ELA++AA+ L LEPE+
Sbjct: 431 MVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPEN 490
Query: 606 SGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
SG +LL ++YAN W+ R++ ++++K ++ G SWV++
Sbjct: 491 SGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 165/450 (36%), Gaps = 100/450 (22%)
Query: 15 RTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLI 74
R C + H + L K ++ + G++ +AR FD M R+ +I
Sbjct: 30 RLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMI 89
Query: 75 SGHVKRREIAKARQLFDEM------------PQRDIVSWNLI---ISGYFSCCGSKF--- 116
+ ++ F EM P S NL+ C KF
Sbjct: 90 GACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 117 ------------------VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
V RK+F ++ E+D V +N +ISGYA N + D+AL L M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 159 P----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGEL 210
+ + ++ NA+I+GF + + + M + D S +++ISGLV N +
Sbjct: 210 KLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQN 269
Query: 211 DMA-------------------AGILLECGDGDEGKH-DLVQAYNT-------------L 237
+ A +L C KH + Y+ L
Sbjct: 270 EKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
+ YG+ G + EA LF + P ++ V++NSM+ CY G A EL
Sbjct: 330 LDMYGKCGFISEAMILFRKTP-------------KKTTVTFNSMIFCYANHGLADKAVEL 376
Query: 298 FDSM---GER-DTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIISGFA 348
FD M GE+ D + +++ + LF M + P + ++
Sbjct: 377 FDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLG 436
Query: 349 QIGDLKVAKDFFERMP-QKNLISWNSLIAG 377
+ G L A + + M + +L W +L+A
Sbjct: 437 RAGKLVEAYEMIKAMRMEPDLFVWGALLAA 466
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 198/715 (27%), Positives = 325/715 (45%), Gaps = 123/715 (17%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR-----DIVSWNLI 104
G ++R FD+++ +N WN +IS + + + + F EM D ++ +
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 105 ISGYFSCCGSKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQALKLFDAMPE 160
I +C G V G + + + D N ++S Y +G + AL+LFD MPE
Sbjct: 194 IK---ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250
Query: 161 RNAVSSNAVI----------TGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGEL 210
RN VS N++I FLL G++ G MP D A+L ++ R E+
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP--DVATLVTVLPVCAREREI 308
Query: 211 DMAAGI----------------------LLECGDGDEGKHDL-------VQAYNTLIAGY 241
+ G+ +CG + V ++NT++ G+
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKED----------------------------GRRFRR 273
G + ++ D K D + F
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD------------ 321
N + N+ + Y K G + A+ +F + + +WN +I G+ Q +D
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 322 --------------MEEASKL-------------FKEMPSPDALSWNSIISGFAQIGDLK 354
+ SKL + D + S++S + G+L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
+ F+ M K+L+SWN++I GY +N A+ +F QM L G + ++ V C+
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 415 GLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
L L LG++ H K ++ D I SLI MY++ G+I ++ VFN +K K +WN
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWN 667
Query: 474 AMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
AMI GY HGLA +A++LF++M+R +P +TF+ VL AC H+GL+ EG R + M +
Sbjct: 668 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 727
Query: 534 YGIEPRVEHFASFVDILGRQGQLQEAMDLI-NSMPVKPDKAVWGALLGSCRVHGNVELAQ 592
+G++P ++H+A +D+LGR GQL +A+ ++ M + D +W +LL SCR+H N+E+ +
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 593 VAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
A L LEPE YVLL N+YA L W+D +VR M E +++K G SW++
Sbjct: 788 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 182/432 (42%), Gaps = 64/432 (14%)
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGKHD----LVQAYNTLIAGYGQSGKVEEARRLFDR 256
IS G+LD + + E DE D + +A L+ G+ +E R++
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 257 IPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGY 316
+ R R + V ++ Y G +R +FD++ ++ WN +IS Y
Sbjct: 110 VSGST--------RLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY 161
Query: 317 VQISDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLKV---------------- 355
+ +E + F EM S PD ++ +I A + D+ +
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED 221
Query: 356 -------------------AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
A F+ MP++NL+SWNS+I + N + + L +M
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 397 EGEK----PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCG 451
E PD TL +VL VC ++ LGK +H K + +L +NN+L+ MYS+CG
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCG 341
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR--LKIHPTYITFIS 509
I A +F +M K+V++WN M+GG+++ G ++ +QM + +T ++
Sbjct: 342 CITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 510 VLNACAHAGLVEEGRR-QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPV 568
+ C H + + S+ ++ V + +FV + G L A + + +
Sbjct: 401 AVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIRS 458
Query: 569 KPDKAVWGALLG 580
K + W AL+G
Sbjct: 459 KTVNS-WNALIG 469
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 209/486 (43%), Gaps = 54/486 (11%)
Query: 115 KFVEEGRKLFDEMP-----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAV 169
K +E GRK+ + D V +I+ YA G D + +FDA+ +N NAV
Sbjct: 98 KDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 170 ITGFLLNGDVDSAVGFFKRMPEC-----DSASLSALISGLVRNGELDMAAGILLECGDGD 224
I+ + N D + F M D + +I G D+ G+ +
Sbjct: 158 ISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA--GMSDVGIGLAVHGLVVK 215
Query: 225 EGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMC 284
G + V N L++ YG G V +A +LFD +P RN+VSWNSM+
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP-------------ERNLVSWNSMIRV 262
Query: 285 YVKVGDIVSARELFDSMGERD-----------------TCAWNTMISGYVQISDMEEASK 327
+ G + L M E + CA I + +
Sbjct: 263 FSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLR 322
Query: 328 LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGA 387
L KE+ +AL + +++ G + A+ F+ KN++SWN+++ G+ D G
Sbjct: 323 LDKELVLNNAL-----MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGT 377
Query: 388 IELFSQMQLEGE--KPDRHTLSSVLSVCTGLVDLYLGKQMH--QLVTKTVIPDLPINNSL 443
++ QM GE K D T+ + + VC L K++H L + V +L + N+
Sbjct: 378 FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VANAF 436
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT 503
+ Y++CG++ A VF+ ++ K V +WNA+IGG+A +L+ QMK + P
Sbjct: 437 VASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 495
Query: 504 YITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI 563
T S+L+AC+ + G+ +I ++ +E + + S + + G+L L
Sbjct: 496 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 564 NSMPVK 569
++M K
Sbjct: 555 DAMEDK 560
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 172/408 (42%), Gaps = 58/408 (14%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N ++ + G LS A+ F ++ + +WN LI GH + + + +M ++
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 100 SWNLIISGYFSCCGS-KFVEEGRK----LFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
+ + S C K + G++ + ERD + +V+S Y G + L
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM-- 212
FDAM +++ VS N VITG+L NG D A+G F++M ++ G+ G M
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM----------VLYGIQLCGISMMPV 603
Query: 213 --AAGILLECGDGDEG-----KH---DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
A +L G E KH D +LI Y ++G + ++ ++F+ +
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK---- 659
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQ 318
++ SWN+M+M Y G A +LF+ M D + +++
Sbjct: 660 ---------EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 710
Query: 319 ISDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDL-KVAKDFFERMPQKNLIS-W 371
+ E + +M S P+ + +I + G L K + E M ++ + W
Sbjct: 711 SGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIW 770
Query: 372 NSLIAGYDKNEDY----KGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
SL++ +++ K A +LF +LE EKP+ + L S L G
Sbjct: 771 KSLLSSCRIHQNLEMGEKVAAKLF---ELEPEKPENYVLLSNLYAGLG 815
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 111/536 (20%), Positives = 224/536 (41%), Gaps = 93/536 (17%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM------PQRDIVSW 101
+ G ++ A+ F ++N V+WNT++ G + + +M + D V+
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT- 397
Query: 102 NLIISGYFSCCGSKFVEEGRKLF-----DEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
I++ C F+ ++L E + V+ N ++ YAK G + A ++F
Sbjct: 398 --ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYAQRVFH 454
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISG--------- 203
+ + S NA+I G + D ++ +M DS ++ +L+S
Sbjct: 455 GIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRL 514
Query: 204 -------LVRNG-ELDM-----AAGILLECGD-------GDEGKHDLVQAYNTLIAGYGQ 243
++RN E D+ + + CG+ D + + ++NT+I GY Q
Sbjct: 515 GKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ 574
Query: 244 SGKVEEARRLFDR----------------------IPNDQGDGKEDGRRFRRNVVSWNSM 281
+G + A +F + +P+ + G+E ++++ ++
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR-LGREAHAYALKHLLEDDAF 633
Query: 282 MMC-----YVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP--- 333
+ C Y K G I + ++F+ + E+ T +WN MI GY +EA KLF+EM
Sbjct: 634 IACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTG 693
Query: 334 -SPDALSWNSIISGFAQIGDLKVAKDFFERMP-----QKNLISWNSLIAGYDKNEDYKGA 387
+PD L++ +++ G + + ++M + NL + +I + A
Sbjct: 694 HNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKA 753
Query: 388 IELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLIT-M 446
+ + ++ E+ D S+LS C +L +G+++ + + + P+ P N L++ +
Sbjct: 754 LRVVAEEM--SEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE-LEPEKPENYVLLSNL 810
Query: 447 YSRCGAIGEACTV---FNEMKFYKDV-ITWNAMIGGYASHGLAVDALELFKQMKRL 498
Y+ G + V NEM KD +W + S + L+ F+++K L
Sbjct: 811 YAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSL 866
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 246/429 (57%), Gaps = 10/429 (2%)
Query: 224 DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS--- 280
DE + AYN +I+GY + G V+E L R+ K DG + + NS
Sbjct: 93 DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM--SYSGEKADGYTLSMVLKASNSRGS 150
Query: 281 MMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSW 340
M+ + +V AR + E D ++ YV+ +E A +F+ M + +
Sbjct: 151 TMILPRSLCRLVHAR-IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCC 209
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKN-EDYKGAIELFSQMQLEGE 399
S+ISG+ G ++ A++ F K+++ +N+++ G+ ++ E K +++++ MQ G
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACT 458
P+ T +SV+ C+ L +G+Q+H Q++ V + + +SL+ MY++CG I +A
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
VF++M+ K+V +W +MI GY +G +ALELF +MK +I P Y+TF+ L+AC+H+G
Sbjct: 330 VFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 388
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
LV++G F SM DY ++P++EH+A VD++GR G L +A + +MP +PD +W AL
Sbjct: 389 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAAL 448
Query: 579 LGSCRVHGNVELAQVAAQALISLEPES-SGPYVLLYNMYANLELWDDAERVRVLMEEKNV 637
L SC +HGNVELA +AA L L + G Y+ L N+YA+ + WD+ ++R +M+ + +
Sbjct: 449 LSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRI 508
Query: 638 KKQTGYSWV 646
K G SW
Sbjct: 509 SKTIGRSWT 517
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 177/408 (43%), Gaps = 72/408 (17%)
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASL 197
+ K G + A ++FD +P+ + N +I+G+L +G V + +RM + D +L
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTL 138
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG----YGQSGKVEEARRL 253
S ++ G + L K D V+ + LI Y +SGK+E AR +
Sbjct: 139 SMVLKASNSRGSTMILPRSLCRLVHARIIKCD-VELDDVLITALVDTYVKSGKLESARTV 197
Query: 254 FDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMI 313
F+ + ++ NVV SM+ Y+ G + A E+F++ +D +N M+
Sbjct: 198 FETMKDE-------------NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMV 244
Query: 314 SGYVQISDMEEAS-KLFKEMP----SPDALSWNSIISG---------------------- 346
G+ + + + S ++ M P+ ++ S+I
Sbjct: 245 EGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGV 304
Query: 347 -------------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
+A+ G + A+ F++M +KN+ SW S+I GY KN + + A+ELF++
Sbjct: 305 YTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTR 364
Query: 394 MQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSR 449
M+ +P+ T LS C +GLVD G ++ + + + ++ P + ++ + R
Sbjct: 365 MKEFRIEPNYVTFLGALSACSHSGLVD--KGYEIFESMQRDYSMKPKMEHYACIVDLMGR 422
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG----LAVDALELFK 493
G + +A M D W A++ HG ++ A ELFK
Sbjct: 423 AGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 43/282 (15%)
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ G L A+ F+ +P+ L ++N +I+GY K+ K + L +M GEK D +TLS
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 409 VL--------------SVC-------------------TGLVDLYLGKQMHQLVTKTVIP 435
VL S+C T LVD Y+ K +TV
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYV-KSGKLESARTVFE 199
Query: 436 DLPINN-----SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG-LAVDAL 489
+ N S+I+ Y G + +A +FN K KD++ +NAM+ G++ G A ++
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKV-KDIVVYNAMVEGFSRSGETAKRSV 258
Query: 490 ELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDI 549
+++ M+R HP TF SV+ AC+ E G +Q ++ I G+ ++ +S +D+
Sbjct: 259 DMYISMQRAGFHPNISTFASVIGACSVLTSHEVG-QQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 550 LGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+ G + +A + + M K + W +++ +GN E A
Sbjct: 318 YAKCGGINDARRVFDQMQEK-NVFSWTSMIDGYGKNGNPEEA 358
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 152/384 (39%), Gaps = 95/384 (24%)
Query: 112 CGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP------------ 159
CG + R++FDE+P+ ++N +ISGY K+G + + L L M
Sbjct: 82 CGC--LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLS 139
Query: 160 --------------------------------ERNAVSSNAVITGFLLNGDVDSAVGFFK 187
E + V A++ ++ +G ++SA F+
Sbjct: 140 MVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 188 RMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKV 247
M + + +++ISG + G ++ A I + K + YN ++ G+ +SG
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIF------NTTKVKDIVVYNAMVEGFSRSG-- 251
Query: 248 EEARRLFDRIPNDQGDG--------------------KEDGRRFRRNVVS---------W 278
E A+R D + Q G E G++ ++
Sbjct: 252 ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMG 311
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----S 334
+S++ Y K G I AR +FD M E++ +W +MI GY + + EEA +LF M
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMP-----QKNLISWNSLIAGYDKNEDYKGAIE 389
P+ +++ +S + G + + FE M + + + ++ + D A E
Sbjct: 372 PNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFE 431
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVC 413
M E+PD +++LS C
Sbjct: 432 FARAMP---ERPDSDIWAALLSSC 452
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 127/293 (43%), Gaps = 44/293 (15%)
Query: 7 RLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRN 66
R S + LPR+LC A K + +L + +++G+L ART F++MK N
Sbjct: 148 RGSTMILPRSLCRLVHARIIKCDVELDDVL--ITALVDTYVKSGKLESARTVFETMKDEN 205
Query: 67 TVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY------------------ 108
V ++ISG++ + + A ++F+ +DIV +N ++ G+
Sbjct: 206 VVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQ 265
Query: 109 ---FSCCGSKFV------------EEGRKLFDEMPERDCVSW----NTVISGYAKNGRMD 149
F S F E G+++ ++ + + ++++ YAK G ++
Sbjct: 266 RAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIN 325
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLV 205
A ++FD M E+N S ++I G+ NG+ + A+ F RM E + + +S
Sbjct: 326 DARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS 385
Query: 206 RNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+G +D I E D ++ Y ++ G++G + +A +P
Sbjct: 386 HSGLVDKGYEI-FESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 169/606 (27%), Positives = 295/606 (48%), Gaps = 81/606 (13%)
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
+ ++ R +FD++PE D W ++ Y N + +KL+D + + + V + L
Sbjct: 91 YTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALK 150
Query: 176 NG----DVDSAVGF---FKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKH 228
D+D+ ++P D+ L+ L+ + GE+ A + D
Sbjct: 151 ACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVF-----NDITLR 205
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE-----------------DGRRF 271
++V + ++IAGY ++ EE LF+R+ + G E G+ F
Sbjct: 206 NVV-CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 272 RRNVVS---------WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
+V S++ YVK GDI +AR +F+ D W MI GY +
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 323 EEASKLFKEMPS----PDALSWNSIISGFAQIGDLKV----------------------- 355
EA LF++M P+ ++ S++SG I +L++
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALV 384
Query: 356 -----------AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRH 404
AK FE +K++++WNS+I+G+ +N A+ LF +M E P+
Sbjct: 385 HMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGV 444
Query: 405 TLSSVLSVCTGLVDLYLGKQMHQLVTKT---VIPDLPINNSLITMYSRCGAIGEACTVFN 461
T++S+ S C L L +G +H K + + +L+ Y++CG A +F+
Sbjct: 445 TVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFD 504
Query: 462 EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
++ K+ ITW+AMIGGY G + +LELF++M + + P TF S+L+AC H G+V
Sbjct: 505 TIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 522 EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
EG++ F+SM DY P +H+ VD+L R G+L++A+D+I MP++PD +GA L
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
Query: 582 CRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQT 641
C +H +L ++ + ++ L P+ + YVL+ N+YA+ W+ A+ VR LM+++ + K
Sbjct: 624 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683
Query: 642 GYSWVD 647
G+S ++
Sbjct: 684 GHSTME 689
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 197/443 (44%), Gaps = 57/443 (12%)
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
L++ YG G ++AR +FD+IP + W M+ CY + V +
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIP-------------EPDFYLWKVMLRCYCLNKESVEVVK 128
Query: 297 LFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEM---PSPDALSWNSIISGFAQ 349
L+D + + D ++ + ++ D++ K+ ++ PS D + ++ +A+
Sbjct: 129 LYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAK 188
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
G++K A F + +N++ W S+IAGY KN+ + + LF++M+ + +T ++
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
+ CT L L+ GK H + K+ I + SL+ MY +CG I A VFNE + D
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS-HVD 307
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF- 527
++ W AMI GY +G +AL LF++MK ++I P +T SVL+ C +E GR
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 528 -------------NSMINDYG---------------IEPRVEHFASFVDILGRQGQLQEA 559
N++++ Y E + + S + + G + EA
Sbjct: 368 LSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 560 MDL---INSMPVKPDKAVWGALLGSCRVHGNVELA---QVAAQALISLEPESSGPYVLLY 613
+ L +NS V P+ +L +C G++ + + L L S L
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 614 NMYANLELWDDAERVRVLMEEKN 636
+ YA A + +EEKN
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKN 510
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 169/391 (43%), Gaps = 81/391 (20%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV----SWNL 103
+ G + A F+ + RN V W ++I+G+VK + LF+ M + +++ ++
Sbjct: 188 KCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 104 IISGYFSCCGSKFVEEGR----KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
+I +C + +G+ L E +++ Y K G + A ++F+
Sbjct: 248 LI---MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRM------PECDSASLSALIS--GLVRNGELD 211
+ V A+I G+ NG V+ A+ F++M P C ++++++S GL+ N EL
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC--VTIASVLSGCGLIENLELG 362
Query: 212 MAA-GILLECGDGD--------------------------EGKHDLVQAYNTLIAGYGQS 244
+ G+ ++ G D E + D+V A+N++I+G+ Q+
Sbjct: 363 RSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIV-AWNSIISGFSQN 421
Query: 245 GKVEEARRLFDRI------PND----------------------QGDGKEDGRRFRRNVV 276
G + EA LF R+ PN + G +V
Sbjct: 422 GSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVH 481
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM---- 332
+++ Y K GD SAR +FD++ E++T W+ MI GY + D + +LF+EM
Sbjct: 482 VGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQ 541
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
P+ ++ SI+S G + K +F M
Sbjct: 542 QKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDE 92
SS +H + + G AR FD+++ +NT+TW+ +I G+ K+ + + +LF+E
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 93 MPQRDIVSWNLIISGYFSCCG-SKFVEEGRKLFDEMPER-----DCVSWNTVISGYAKNG 146
M ++ + S CG + V EG+K F M + + ++ A+ G
Sbjct: 537 MLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAG 596
Query: 147 RMDQALKLFDAMPERNAVSS-NAVITGFLLNGDVDSAVGFFKRMPEC--DSASLSALISG 203
++QAL + + MP + V A + G ++ D K+M + D AS L+S
Sbjct: 597 ELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSN 656
Query: 204 L 204
L
Sbjct: 657 L 657
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 247/445 (55%), Gaps = 38/445 (8%)
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPN--------------DQGDGKEDGRRFR---- 272
V ++LI+ YG+ G V AR++FD +P GD F
Sbjct: 81 VMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISV 140
Query: 273 -RNVVSWNSMMMCYVKVGDIVSARELFDSMG--ERDTCAWNTMISGYVQISDMEEASKLF 329
RN V+W M+ Y K +I ARELF+ M ++ AW+ M+ YV ME+A K F
Sbjct: 141 CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFF 200
Query: 330 KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
+++P +A W+ ++SG+ +IGD+ A+ F R+ ++L+ WN+LIAGY +N AI+
Sbjct: 201 EDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAID 260
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYS 448
F MQ EG +PD T+SS+LS C L +G+++H L+ I + ++N+LI MY+
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 449 RCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFI 508
+CG + A +VF + + V N+MI A HG +ALE+F M+ L + P ITFI
Sbjct: 321 KCGDLENATSVFESISV-RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFI 379
Query: 509 SVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPV 568
+VL AC H G + EG + F+ M ++P V+HF + +LGR G+L+EA L+ M V
Sbjct: 380 AVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHV 438
Query: 569 KPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLY---------NMYANL 619
KP+ V GALLG+C+VH + E+A+ + + E++G Y N+YA+
Sbjct: 439 KPNDTVLGALLGACKVHMDTEMAEQVMKII-----ETAGSITNSYSENHLASISNLYAHT 493
Query: 620 ELWDDAERVRVLMEEKNVKKQTGYS 644
E W AE +RV ME++ ++K G S
Sbjct: 494 ERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 190/400 (47%), Gaps = 32/400 (8%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ-RDIVSW 101
IS + G + AR FD M RN TWN +I G++ + A LF+E+ R+ V+W
Sbjct: 88 ISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTW 147
Query: 102 NLIISGYFSCCGSKF-VEEGRKLFDEMP--ERDCVSWNTVISGYAKNGRMDQALKLFDAM 158
+I GY G + +E+ R+LF+ MP ++ +W+ ++ Y N +M+ A K F+ +
Sbjct: 148 IEMIKGY----GKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDI 203
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILL 218
PE+NA + +++G+ GDV A F R+ D + LI+G +NG D A
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 219 EC-GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
G+G E V +++++ QSG+++ R + I + R N
Sbjct: 264 NMQGEGYEPDAVTV---SSILSACAQSGRLDVGREVHSLI---------NHRGIELNQFV 311
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS--- 334
N+++ Y K GD+ +A +F+S+ R N+MIS +EA ++F M S
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 335 -PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIE 389
PD +++ ++++ G L F M + N+ + LI ++ K A
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
L +M + KP+ L ++L C +D + +Q+ +++
Sbjct: 432 LVKEMHV---KPNDTVLGALLGACKVHMDTEMAEQVMKII 468
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 48/318 (15%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP 333
+V+ +S++ Y K G +VSAR++FD M ER+ WN MI GY+ D AS LF+E+
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 334 -SPDALSWNSIISGFAQIGDLKVAKDFFERMP--QKNLISWNSLIAGYDKNEDYKGAIEL 390
+ ++W +I G+ + +++ A++ FERMP KN+ +W+ ++ Y N + A +
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 391 FSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRC 450
F + P+++ L +++ Y R
Sbjct: 200 FEDI------PEKNAFVWSL--------------------------------MMSGYFRI 221
Query: 451 GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISV 510
G + EA +F + F +D++ WN +I GYA +G + DA++ F M+ P +T S+
Sbjct: 222 GDVHEARAIFYRV-FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS--FVDILGRQGQLQEAMDLINSMPV 568
L+ACA +G ++ G R+ +S+IN GIE + F S +D+ + G L+ A + S+ V
Sbjct: 281 LSACAQSGRLDVG-REVHSLINHRGIE--LNQFVSNALIDMYAKCGDLENATSVFESISV 337
Query: 569 KPDKAVWGALLGSCRVHG 586
+ A +++ +HG
Sbjct: 338 R-SVACCNSMISCLAIHG 354
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 47/266 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W+ + + ++ +AR FF+ + +N W+ ++SG+ + ++ +AR +F + RD+
Sbjct: 180 WSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239
Query: 99 VSWNLIISGYF--------------------------------SCCGSKFVEEGRKLFDE 126
V WN +I+GY +C S ++ GR++
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL 299
Query: 127 MPERDC-----VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
+ R VS N +I YAK G ++ A +F+++ R+ N++I+ ++G
Sbjct: 300 INHRGIELNQFVS-NALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE 358
Query: 182 AVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
A+ F M D + A+++ V G L I E D + V+ + L
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPN--VKHFGCL 416
Query: 238 IAGYGQSGKVEEARRLFDRI---PND 260
I G+SGK++EA RL + PND
Sbjct: 417 IHLLGRSGKLKEAYRLVKEMHVKPND 442
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 276/530 (52%), Gaps = 31/530 (5%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC--- 192
N++I+ Y K + A +FD M ER+ +S N+VI G NG AV F ++ C
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 193 -DSASLSALISGLVRNGE-LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
D ++++++ E L ++ + + + V LI Y ++ ++EA
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS--TALIDAYSRNRCMKEA 471
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GERD-- 305
LF+R D +V+WN+MM Y + D +LF M GER
Sbjct: 472 EILFERHNFD--------------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 306 -TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNS--IISGFAQIGDLKVAKDFFER 362
T A G++ + + + D W S I+ + + GD+ A+ F+
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG 422
+P + ++W ++I+G +N + + A +FSQM+L G PD T++++ + L L G
Sbjct: 578 IPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637
Query: 423 KQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
+Q+H K + P + SL+ MY++CG+I +A +F ++ ++ WNAM+ G A
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQ 696
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
HG + L+LFKQMK L I P +TFI VL+AC+H+GLV E + SM DYGI+P +E
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIE 756
Query: 542 HFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISL 601
H++ D LGR G +++A +LI SM ++ +++ LL +CRV G+ E + A L+ L
Sbjct: 757 HYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL 816
Query: 602 EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
EP S YVLL NMYA WD+ + R +M+ VKK G+SW++ N+
Sbjct: 817 EPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNK 866
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/539 (25%), Positives = 238/539 (44%), Gaps = 51/539 (9%)
Query: 73 LISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM----- 127
L++ ++K ++ + + LF+EMP RD+V WNL++ Y F EE L
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE---MGFKEEAIDLSSAFHSSGL 242
Query: 128 -PERDCVSWNTVISGYAKN-GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGF 185
P + ISG + G++ DA + N ++ +L +G + +
Sbjct: 243 NPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKC 302
Query: 186 FKRM----PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGY 241
F M ECD + +++ V+ L A G + C G ++ N+LI Y
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSL--ALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
+ K AR +FD + R+++SWNS++ + G V A LF +
Sbjct: 361 CKLRKFGFARTVFDNMS-------------ERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407
Query: 302 GERDTCAWN----TMISGYVQISDMEEASKLFKEMP--------SPDALSWNSIISGFAQ 349
C TM S S + E L K++ D+ ++I +++
Sbjct: 408 LR---CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
+K A+ FER +L++WN+++AGY ++ D ++LF+ M +GE+ D TL++V
Sbjct: 465 NRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
C L + GKQ+H K+ DL +++ ++ MY +CG + A F+ + D
Sbjct: 524 FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD 583
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR-QF 527
V W MI G +G A +F QM+ + + P T ++ A + +E+GR+
Sbjct: 584 V-AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
N++ + +P V S VD+ + G + +A L + + A W A+L HG
Sbjct: 643 NALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLAQHG 698
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 204/459 (44%), Gaps = 86/459 (18%)
Query: 65 RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLF 124
RN +T + L+ G I F+E P+R ++ N +IS Y S CGS + R++F
Sbjct: 47 RNAITSSDLMLGKCTHARILT----FEENPERFLI--NNLISMY-SKCGS--LTYARRVF 97
Query: 125 DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
D+MP+RD VSWN++++ YA++ V N + FLL + V
Sbjct: 98 DKMPDRDLVSWNSILAAYAQSSE---------------CVVEN-IQQAFLLFRILRQDVV 141
Query: 185 FFKRMPECDSASLSALISGLVRNGEL---DMAAGILLECG-DGDEGKHDLVQAYNTLIAG 240
+ RM +LS ++ + +G + + G + G DGDE L+
Sbjct: 142 YTSRM------TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF------VAGALVNI 189
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG---DIVSAREL 297
Y + GKV+E + LF+ +P R+VV WN M+ Y+++G + +
Sbjct: 190 YLKFGKVKEGKVLFEEMP-------------YRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 298 FDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAK 357
F S G ++ E +L + D+ + + FA D
Sbjct: 237 FHSSG----------------LNPNEITLRLLARISGDDSDAGQ--VKSFANGNDASSVS 278
Query: 358 DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
+ R N ++ Y + Y ++ F+ M + D+ T +L+ +
Sbjct: 279 EIIFR---------NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVD 329
Query: 418 DLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
L LG+Q+H + K + L ++NSLI MY + G A TVF+ M +D+I+WN++I
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-ERDLISWNSVI 388
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACA 515
G A +GL V+A+ LF Q+ R + P T SVL A +
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 178/446 (39%), Gaps = 132/446 (29%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ + + ART FD+M R+ ++WN++I+G + +A LF ++ +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR---- 409
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
CG K P++ M LK ++P
Sbjct: 410 ------------CGLK------------PDQ---------------YTMTSVLKAASSLP 430
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
E ++S + +N DS V +ALI RN + A IL E
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVS-------------TALIDAYSRNRCMK-EAEILFE 476
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKED------------ 267
DLV A+N ++AGY QS + +LF + + QG+ +D
Sbjct: 477 -----RHNFDLV-AWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGF 529
Query: 268 ------GRRFRRNVVS-------WNS--MMMCYVKVGDIVSARELFDSMGERDTCAWNTM 312
G++ + W S ++ YVK GD+ +A+ FDS+ D AW TM
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 313 ISGYVQISDMEEASKLFKEM----PSPD--------------------------ALSWN- 341
ISG ++ + E A +F +M PD AL N
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 342 --------SIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
S++ +A+ G + A F+R+ N+ +WN+++ G ++ + K ++LF Q
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 394 MQLEGEKPDRHTLSSVLSVC--TGLV 417
M+ G KPD+ T VLS C +GLV
Sbjct: 710 MKSLGIKPDKVTFIGVLSACSHSGLV 735
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 9/168 (5%)
Query: 418 DLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
DL LGK H +++T P+ + N+LI+MYS+CG++ A VF++M +D+++WN+++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP-DRDLVSWNSIL 112
Query: 477 GGYASHGLAV-----DALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI 531
YA V A LF+ +++ ++ + +T +L C H+G V F+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYA 171
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
G++ + V+I + G+++E L MP + D +W +L
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLML 218
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 124/281 (44%), Gaps = 29/281 (10%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS 106
++ G +S A+ FDS+ + V W T+ISG ++ E +A +F +M ++ I+
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 107 --GYFSCCGSKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDAMPE 160
S C + +E+GR++ + +C + +++ YAK G +D A LF +
Sbjct: 623 TLAKASSCLTA-LEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM 681
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGI 216
N + NA++ G +G+ + FK+M D + ++S +G L A
Sbjct: 682 MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG-LVSEAYK 740
Query: 217 LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND---------------Q 261
+ GD G ++ Y+ L G++G V++A L + + + Q
Sbjct: 741 HMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQ 800
Query: 262 GDGKEDGRRFRRNVVSWNSM-MMCYVKVGDIVSARELFDSM 301
GD E G+R ++ + YV + ++ +A +D M
Sbjct: 801 GD-TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEM 840
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 171/562 (30%), Positives = 283/562 (50%), Gaps = 90/562 (16%)
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
V WN+++S YAK G++ A+KLFD MP R+ +S N V GFL N + +S KRM
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 193 ---DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
D A+L+ ++S + E + ++ H L +++GY + V
Sbjct: 151 GGFDHATLTIVLS-VCDTPEFCLVTKMI----------HAL-----AILSGYDKEISVG- 193
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAW 309
N ++ Y K G VS R +FD M R+
Sbjct: 194 -----------------------------NKLITSYFKCGCSVSGRGVFDGMSHRNVITL 224
Query: 310 NTMISGYVQISDMEEASKLFKEM----PSPDALSWNS----------IISG--------- 346
+ISG ++ E+ +LF M P+++++ S I+ G
Sbjct: 225 TAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK 284
Query: 347 ----------------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
+++ G ++ A FE + + +S ++ G +N + AI+
Sbjct: 285 YGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQF 344
Query: 391 FSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSR 449
F +M G + D + +S+VL V L LGKQ+H LV K + +NN LI MYS+
Sbjct: 345 FIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSK 404
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
CG + ++ TVF M ++ ++WN+MI +A HG + AL+L+++M L++ PT +TF+S
Sbjct: 405 CGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLS 463
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
+L+AC+H GL+++GR N M +GIEPR EH+ +D+LGR G L+EA I+S+P+K
Sbjct: 464 LLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLK 523
Query: 570 PDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVR 629
PD +W ALLG+C HG+ E+ + AA+ L P+SS ++L+ N+Y++ W + +
Sbjct: 524 PDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTI 583
Query: 630 VLMEEKNVKKQTGYSWVDSSNR 651
M+ V K+TG S ++ ++
Sbjct: 584 KRMKAMGVTKETGISSIEIEHK 605
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 199/515 (38%), Gaps = 109/515 (21%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM----- 93
WN +S + G+L +A FD M R+ ++ N + G ++ RE L M
Sbjct: 93 WNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG 152
Query: 94 ---------------PQ------------------RDIVSWNLIISGYFSCCGSKFVEEG 120
P+ ++I N +I+ YF C S G
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV---SG 209
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVI---------- 170
R +FD M R+ ++ VISG +N + L+LF M R V N+V
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLM-RRGLVHPNSVTYLSALAACSG 268
Query: 171 TGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL 230
+ ++ G A+ +K E + SAL+ + G ++ A I + DE
Sbjct: 269 SQRIVEGQQIHAL-LWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE----- 322
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDR---------------------IPNDQGDGKE--- 266
+ ++ G Q+G EEA + F R I N G GK+
Sbjct: 323 -VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHS 381
Query: 267 --DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEE 324
R+F N N ++ Y K GD+ ++ +F M +R+ +WN+MI+ + +
Sbjct: 382 LVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLA 441
Query: 325 ASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDK 380
A KL++EM + P +++ S++ + +G + ++ M + + I +
Sbjct: 442 ALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIE--------PR 493
Query: 381 NEDYKGAIELFSQMQLEGE----------KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
E Y I++ + L E KPD ++L C+ D +G+ + +
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 431 KTVIPDLPINNSLIT-MYSRCGAIGEACTVFNEMK 464
+T PD + LI +YS G E MK
Sbjct: 554 QTA-PDSSSAHILIANIYSSRGKWKERAKTIKRMK 587
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 316/627 (50%), Gaps = 58/627 (9%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRR-------EIAKARQLFDEMPQRDIVS 100
+ GR A F+++ + V+WNT++SG + + A +FD +S
Sbjct: 123 KAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALS 182
Query: 101 WNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFD 156
+ C GS+ G +L + E D V N+ I+ Y+++G A ++FD
Sbjct: 183 F---------CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 157 AMPERNAVSSNAVITGFLLNGDVD-SAVGFFKRM----PECDSASLSALISGLVRNGELD 211
M ++ +S N++++G G AV F+ M E D S +++I+ +L
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 212 MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
+A I C G L++ N L++ Y + G +E + +F ++
Sbjct: 294 LARQIHGLCIK--RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS------------- 338
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSM--------GERDTCAWNTMISGYVQISDME 323
RNVVSW +M+ + FD + G + N I ++I +
Sbjct: 339 ERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLC 398
Query: 324 EASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNED 383
+ E PS NS I+ +A+ L+ AK FE + + +ISWN++I+G+ +N
Sbjct: 399 IKTGFVSE-PSVG----NSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGF 453
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYL--GKQMHQLVTKTVIPDLPI-N 440
A+++F E P+ +T SVL+ D+ + G++ H + K + P+ +
Sbjct: 454 SHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS 512
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
++L+ MY++ G I E+ VFNEM K+ W ++I Y+SHG + LF +M + +
Sbjct: 513 SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENV 571
Query: 501 HPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAM 560
P +TF+SVL AC G+V++G FN MI Y +EP EH++ VD+LGR G+L+EA
Sbjct: 572 APDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAE 631
Query: 561 DLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLE 620
+L++ +P P +++ ++LGSCR+HGNV++ A+ + ++PE SG YV +YN+YA E
Sbjct: 632 ELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKE 691
Query: 621 LWDDAERVRVLMEEKNVKKQTGYSWVD 647
WD A +R M +KNV K+ G+SW+D
Sbjct: 692 EWDKAAEIRKAMRKKNVSKEAGFSWID 718
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 258/559 (46%), Gaps = 52/559 (9%)
Query: 55 ARTFFDSMKHRN-TVTWNTLISGHVKRREIAKARQLFDEMPQ-------RDIVSWNLIIS 106
A FD RN T + N IS ++R A+A +F E Q D V+ L +
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 107 GYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
G CVS N V+ Y K GR D AL +F+ + + + VS
Sbjct: 87 ACRGDLKRGCQIHGFSTTSGFTSFVCVS-NAVMGMYRKAGRFDNALCIFENLVDPDVVSW 145
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGD 222
N +++GF D A+ F RM D+ + S +S V G G+ L+
Sbjct: 146 NTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCV--GSEGFLLGLQLQSTV 200
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
G + N+ I Y +SG ARR+FD + ++++SWNS++
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMS-------------FKDMISWNSLL 247
Query: 283 MCYVKVGD-----IVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL----FKEMP 333
+ G +V R++ E D ++ ++I+ +D++ A ++ K
Sbjct: 248 SGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
N ++S +++ G L+ K F +M ++N++SW ++I+ N+D A+ +F
Sbjct: 308 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS---SNKD--DAVSIFLN 362
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGA 452
M+ +G P+ T +++ + G ++H L KT P + NS IT+Y++ A
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEA 422
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
+ +A F ++ F +++I+WNAMI G+A +G + +AL++F + P TF SVLN
Sbjct: 423 LEDAKKAFEDITF-REIISWNAMISGFAQNGFSHEALKMFLSAAA-ETMPNEYTFGSVLN 480
Query: 513 ACAHAG--LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
A A A V++G+R ++ G+ ++ +D+ ++G + E+ + N M K
Sbjct: 481 AIAFAEDISVKQGQRCHAHLLK-LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK- 538
Query: 571 DKAVWGALLGSCRVHGNVE 589
++ VW +++ + HG+ E
Sbjct: 539 NQFVWTSIISAYSSHGDFE 557
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 120/551 (21%), Positives = 216/551 (39%), Gaps = 136/551 (24%)
Query: 11 LQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTW 70
LQL T+ GL ES L+ N I+ R+G AR FD M ++ ++W
Sbjct: 194 LQLQSTVVKTGL---------ESDLV-VGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 71 NTLISGHVKR-----REIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD 125
N+L+SG + + R + E + D VS+ +I+ +CC ++ R++
Sbjct: 244 NSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVIT---TCCHETDLKLARQIHG 300
Query: 126 EMPERDCVSW----NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
+R S N ++S Y+K G ++ +F M ERN VS +I+ + D
Sbjct: 301 LCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDD 355
Query: 182 AVGFFKRM------PECDSASLSALISGLVRNGELDMAA---GILLECGDGDEGKHDLVQ 232
AV F M P + + LI+ + N ++ G+ ++ G E
Sbjct: 356 AVSIFLNMRFDGVYP--NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP-----S 408
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
N+ I Y + +E+A++ F+ I R ++SWN+M+ + + G
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDIT-------------FREIISWNAMISGFAQNGFSH 455
Query: 293 SARELFDS----------------------------MGER----------DTC--AWNTM 312
A ++F S G+R ++C + +
Sbjct: 456 EALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSAL 515
Query: 313 ISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWN 372
+ Y + +++E+ K+F EM + W SIIS ++ GD + + F +M ++N+
Sbjct: 516 LDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENV---- 571
Query: 373 SLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLVDLYLGKQMHQLVT 430
PD T SVL+ C G+VD G ++ ++
Sbjct: 572 ---------------------------APDLVTFLSVLTACNRKGMVD--KGYEIFNMMI 602
Query: 431 KT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG---LA 485
+ + P + ++ M R G + EA + +E+ +M+G HG +
Sbjct: 603 EVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMG 662
Query: 486 VDALELFKQMK 496
EL +MK
Sbjct: 663 AKVAELAMEMK 673
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 213/348 (61%), Gaps = 4/348 (1%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
E D NT+I Y D A KLF EMP + ++WNSI+ +A+ GD+ A+ F+
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYL 421
M ++++++W+S+I GY K +Y A+E+F QM G K + T+ SV+ C L L
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 422 GKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYK-DVITWNAMIGGY 479
GK +H+ + +P + + SLI MY++CG+IG+A +VF + D + WNA+IGG
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 319
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR 539
ASHG ++L+LF +M+ KI P ITF+ +L AC+H GLV+E F S+ + G EP+
Sbjct: 320 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPK 378
Query: 540 VEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALI 599
EH+A VD+L R G +++A D I+ MP+KP ++ GALL C HGN+ELA+ + LI
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 600 SLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
L+P + G YV L N+YA + + A +R ME+K VKK G+S +D
Sbjct: 439 ELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILD 486
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 175/425 (41%), Gaps = 72/425 (16%)
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
E VS S + +G +D A K + + N VI GF + + + ++ + +
Sbjct: 39 EEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQ 98
Query: 189 M------PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
M P+ + S + N +L G L C G + NTLI YG
Sbjct: 99 MLRFGLLPDHMTYPFLMKSSSRLSNRKL----GGSLHCSVVKSGLEWDLFICNTLIHMYG 154
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG 302
AR+LFD +P+ +N+V+WNS++ Y K GD+VSAR +FD M
Sbjct: 155 SFRDQASARKLFDEMPH-------------KNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEM-----PSPDALSWNSIISGFAQIGDLKVAK 357
ERD W++MI GYV+ + +A ++F +M + ++ S+I A +G L K
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK 261
Query: 358 ----------------------DFFER---------------MPQKNLISWNSLIAGYDK 380
D + + + + + + WN++I G
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLAS 321
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLVD--LYLGKQMHQLVTKTVIPD 436
+ + +++LF +M+ PD T +L+ C+ GLV + K + + + P
Sbjct: 322 HGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAE---PK 378
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
++ + SR G + +A +EM A++ G +HG A + K++
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 497 RLKIH 501
L+ H
Sbjct: 439 ELQPH 443
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 132/305 (43%), Gaps = 52/305 (17%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER 130
NTLI + R+ A AR+LFDEMP +++V+WN I+ Y S V R +FDEM ER
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY---AKSGDVVSARLVFDEMSER 203
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
D V+W+++I GY K G ++AL++FD M + +N V ++
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVI--------------- 248
Query: 191 ECDSASLSALISG-LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
C A L AL G V LD+ + V +LI Y + G + +
Sbjct: 249 -CACAHLGALNRGKTVHRYILDVHLPL-------------TVILQTSLIDMYAKCGSIGD 294
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----D 305
A +F R + D + WN+++ G I + +LF M E D
Sbjct: 295 AWSVFYRASVKETDA-----------LMWNAIIGGLASHGFIRESLQLFHKMRESKIDPD 343
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFE 361
+ +++ ++EA FK + P + + ++ ++ G +K A DF
Sbjct: 344 EITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFIS 403
Query: 362 RMPQK 366
MP K
Sbjct: 404 EMPIK 408
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 20/235 (8%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN + ++G + AR FD M R+ VTW+++I G+VKR E KA ++FD+M +
Sbjct: 177 WNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGS 236
Query: 99 VSWN--LIISGYFSCCGSKFVEEG----RKLFDEMPERDCVSWNTVISGYAKNGRMDQAL 152
N ++S +C + G R + D + ++I YAK G + A
Sbjct: 237 SKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAW 296
Query: 153 KLF--DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVR 206
+F ++ E +A+ NA+I G +G + ++ F +M E D + L++
Sbjct: 297 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Query: 207 NGELDMAAGI---LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
G + A L E G + +H Y ++ ++G V++A +P
Sbjct: 357 GGLVKEAWHFFKSLKESGAEPKSEH-----YACMVDVLSRAGLVKDAHDFISEMP 406
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 233/382 (60%), Gaps = 6/382 (1%)
Query: 274 NVVSWNSMMM-CYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM 332
N +++S++ C K G ++ L +G D ++ Y + D+ A K+F M
Sbjct: 129 NEFTFSSLLKSCSTKSGKLIHTHVLKFGLG-IDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
P +S ++I+ +A+ G+++ A+ F+ M +++++SWN +I GY ++ A+ LF
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 393 QMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRC 450
++ EG+ KPD T+ + LS C+ + L G+ +H V + I ++ + LI MYS+C
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 451 GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHPTYITFIS 509
G++ EA VFN+ KD++ WNAMI GYA HG + DAL LF +M+ + + PT ITFI
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIG 366
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
L ACAHAGLV EG R F SM +YGI+P++EH+ V +LGR GQL+ A + I +M +
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 570 PDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVR 629
D +W ++LGSC++HG+ L + A+ LI L ++SG YVLL N+YA++ ++ +VR
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 630 VLMEEKNVKKQTGYSWVDSSNR 651
LM+EK + K+ G S ++ N+
Sbjct: 487 NLMKEKGIVKEPGISTIEIENK 508
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 199/458 (43%), Gaps = 88/458 (19%)
Query: 141 GYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSAL 200
YA +G++ +L LF + + A I +NG D A + + L
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ-----------L 121
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGK--HDLVQAY---------NTLIAGYGQSGKVEE 249
+S + E ++ LL+ GK H V + L+ Y + G V
Sbjct: 122 LSSEINPNEFTFSS--LLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAW 309
A+++FDR+P R++VS +M+ CY K G++ +AR LFDSM ERD +W
Sbjct: 180 AQKVFDRMP-------------ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226
Query: 310 NTMISGYVQISDMEEASKLFKEM-----PSPDALSWNSIISGFAQIGDLKVAK------- 357
N MI GY Q +A LF+++ P PD ++ + +S +QIG L+ +
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 358 ---------------DFFER-------------MPQKNLISWNSLIAGYDKNEDYKGAIE 389
D + + P+K++++WN++IAGY + + A+
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 390 LFSQMQ-LEGEKPDRHTLSSVLSVC--TGLVD--LYLGKQMHQLVTKTVIPDLPINNSLI 444
LF++MQ + G +P T L C GLV+ + + + M Q + P + L+
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ--EYGIKPKIEHYGCLV 404
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
++ R G + A M D + W++++G HG V E+ + + L I +
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSG 464
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGI--EPRV 540
I ++ + N A G EG + +++ + GI EP +
Sbjct: 465 I-YVLLSNIYASVGDY-EGVAKVRNLMKEKGIVKEPGI 500
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 156/344 (45%), Gaps = 35/344 (10%)
Query: 73 LISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC 132
L+ + K ++ A+++FD MP+R +VS +I+ Y VE R LFD M ERD
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY---AKQGNVEAARALFDSMCERDI 223
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAM-----PERNAVSSNAVITGFLLNGDVDSA--VGF 185
VSWN +I GYA++G + AL LF + P+ + ++ A ++ G +++ +
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 186 FKRMPEC--DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQ 243
F + + + LI + G L+ A + D + D+V A+N +IAGY
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVF-----NDTPRKDIV-AWNAMIAGYAM 337
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
G ++A RLF+ + G D +++ + G + +F+SMG+
Sbjct: 338 HGYSQDALRLFNEMQGITGLQPTD--------ITFIGTLQACAHAGLVNEGIRIFESMGQ 389
Query: 304 RDTCA-----WNTMISGYVQISDMEEASKLFKEMP-SPDALSWNSIISGFAQIGDLKVAK 357
+ ++S + ++ A + K M D++ W+S++ GD + K
Sbjct: 390 EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGK 449
Query: 358 DFFERMPQKNLIS---WNSLIAGYDKNEDYKGAIELFSQMQLEG 398
+ E + N+ + + L Y DY+G ++ + M+ +G
Sbjct: 450 EIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKG 493
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 58/326 (17%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G + A+ FD M R+ V+ +I+ + K+ + AR LFD M +RDIVSWN++I G
Sbjct: 173 KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDG 232
Query: 108 YFS--------CCGSKFVEEGRKLFDEMPERDCVS------------WNTV--------- 138
Y K + EG+ DE+ +S W V
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 139 --------ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
I Y+K G +++A+ +F+ P ++ V+ NA+I G+ ++G A+ F M
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 191 -----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
+ + + G ++ I G + G ++ Y L++ G++G
Sbjct: 353 GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ-EYGIKPKIEHYGCLVSLLGRAG 411
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD---SMG 302
++ +R ++ I N D + V W+S++ GD V +E+ + +
Sbjct: 412 QL---KRAYETIKNMNMDA---------DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN 459
Query: 303 ERDTCAWNTMISGYVQISDMEEASKL 328
+++ + + + Y + D E +K+
Sbjct: 460 IKNSGIYVLLSNIYASVGDYEGVAKV 485
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 245/429 (57%), Gaps = 20/429 (4%)
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
H V ++N +I GY + G EA +L+ ++ +D + E + S+++C
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDE---------YTVLSLLVCCGH 244
Query: 288 VGDIVSARELFDSMGER------DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWN 341
+ DI + + + R + N ++ Y + + A + F M D SWN
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE-DYKGAIELFSQMQL-EGE 399
+++ GF ++GD++ A+ F++MP+++L+SWNSL+ GY K D + ELF +M + E
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV 364
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACT 458
KPDR T+ S++S +L G+ +H LV + + D ++++LI MY +CG I A
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFM 424
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
VF KDV W +MI G A HG AL+LF +M+ + P +T ++VL AC+H+G
Sbjct: 425 VFKTAT-EKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN-SMPVKPDKAVWGA 577
LVEEG FN M + +G +P EH+ S VD+L R G+++EA D++ MP++P +++WG+
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 543
Query: 578 LLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNV 637
+L +CR ++E A++A L+ LEPE G YVLL N+YA + W +++ R ME + V
Sbjct: 544 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGV 603
Query: 638 KKQTGYSWV 646
KK GYS V
Sbjct: 604 KKTAGYSSV 612
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 148/306 (48%), Gaps = 44/306 (14%)
Query: 340 WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
WNS++ + ++G+ VA+ F RMP ++ S+N +I GY K A++L+ +M +G
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK---TVIPDLPINNSLITMYSRCGAIGEA 456
+PD +T+ S+L C L D+ LGK +H + + +L ++N+L+ MY +C G A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 457 CTVFNEMK-------------FY-----------------KDVITWNAMIGGYASHGLAV 486
F+ MK F +D+++WN+++ GY+ G
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 487 DAL-ELFKQMKRL-KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
+ ELF +M + K+ P +T +S+++ A+ G + GR +I ++ + + F
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR---LQLKGDAFL 405
Query: 545 S--FVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLE 602
S +D+ + G ++ A ++ + D A+W +++ HGN Q A Q ++
Sbjct: 406 SSALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGN---GQQALQLFGRMQ 461
Query: 603 PESSGP 608
E P
Sbjct: 462 EEGVTP 467
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 172/407 (42%), Gaps = 43/407 (10%)
Query: 37 HQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR 96
+ WN + + G A F M H + ++N +I G+ K+ +A +L+ +M
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 97 DIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMPERDCV-SWNTVISG-----YAKNGRMD 149
I + CCG + G+ + + R V S N ++S Y K
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG- 208
A + FDAM +++ S N ++ GF+ GD+++A F +MP+ D S ++L+ G + G
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
+ + E ++ K D V +LI+G +G++ R + + Q G
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMV-SLISGAANNGELSHGRWVHGLVIRLQLKG---- 401
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
+ ++++ Y K G I A +F + E+D W +MI+G + ++A +L
Sbjct: 402 -----DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 329 FKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYD-KNED 383
F M +P+ ++ ++++ + G ++ F M K G+D + E
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK---------FGFDPETEH 507
Query: 384 YKGAIELFSQMQLEGE-----------KPDRHTLSSVLSVCTGLVDL 419
Y ++L + E +P + S+LS C G D+
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 33/294 (11%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF-SCCG 113
A+ FD+MK ++ +WNT++ G V+ ++ A+ +FD+MP+RD+VSWN ++ GY C
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 114 SKFVEEGRKLFDEMP-----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER-----NA 163
+ V R+LF EM + D V+ ++ISG A NG + + + R +A
Sbjct: 348 QRTV---RELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDA 403
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDG 223
S+A+I + G ++ A FK E D A +++I+GL +G A + G
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLF-----G 458
Query: 224 DEGKHDLVQAYNTLIA---GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
+ + TL+A SG VEE +F+ + + G F + S
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFG--------FDPETEHYGS 510
Query: 281 MMMCYVKVGDIVSARELFD-SMGERDT-CAWNTMISGYVQISDMEEASKLFKEM 332
++ + G + A+++ M R + W +++S D+E A E+
Sbjct: 511 LVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 47/229 (20%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRR-EIAKARQLFDEMP 94
+ WN + +R G + A+ FD M R+ V+WN+L+ G+ K+ + R+LF EM
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 95 -----QRDIVSWNLIISG--------------------------YFSC------CGSKFV 117
+ D V+ +ISG + S C +
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGII 419
Query: 118 EEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN----AVITGF 173
E +F E+D W ++I+G A +G QAL+LF M E +N AV+T
Sbjct: 420 ERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTAC 479
Query: 174 LLNGDVDSAVGFFKRMP-----ECDSASLSALISGLVRNGELDMAAGIL 217
+G V+ + F M + ++ +L+ L R G ++ A I+
Sbjct: 480 SHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIV 528
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 215/343 (62%), Gaps = 4/343 (1%)
Query: 312 MISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP--QKNLI 369
+I Y + +A K+F EM D WN++++G+ ++G++ A+ E MP +N +
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
SW +I+GY K+ AIE+F +M +E +PD TL +VLS C L L LG+++ V
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 430 T-KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+ + + +NN++I MY++ G I +A VF E ++V+TW +I G A+HG +A
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVF-ECVNERNVVTWTTIIAGLATHGHGAEA 335
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
L +F +M + + P +TFI++L+AC+H G V+ G+R FNSM + YGI P +EH+ +D
Sbjct: 336 LAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMID 395
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGP 608
+LGR G+L+EA ++I SMP K + A+WG+LL + VH ++EL + A LI LEP +SG
Sbjct: 396 LLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGN 455
Query: 609 YVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
Y+LL N+Y+NL WD++ +R +M+ VKK G S ++ NR
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 37/321 (11%)
Query: 104 IISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP--ER 161
+I YFSC G + + RK+FDEM +D WN +++GY K G MD+A L + MP R
Sbjct: 157 LIQMYFSCGG---LGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR 213
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGIL 217
N VS VI+G+ +G A+ F+RM E D +L A++S G L++ I
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI- 272
Query: 218 LECGDGDE-GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
C D G + V N +I Y +SG + +A +F+ + RNVV
Sbjct: 273 --CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVN-------------ERNVV 317
Query: 277 SWNSMMMCYVKVGDIVSARELFDSM---GER-DTCAWNTMISGYVQISDMEEASKLFKEM 332
+W +++ G A +F+ M G R + + ++S + ++ +LF M
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM 377
Query: 333 PS-----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIAGYDKNEDYK- 385
S P+ + +I + G L+ A + + MP K N W SL+A + + D +
Sbjct: 378 RSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLEL 437
Query: 386 GAIELFSQMQLEGEKPDRHTL 406
G L ++LE + L
Sbjct: 438 GERALSELIKLEPNNSGNYML 458
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 40/289 (13%)
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGY---DKNEDYKGAIELFS 392
D L+ I + G L+ A F P N N++I D+ + AI ++
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCG 451
++ KPD T VL + + D++ G+Q+H Q+V + + LI MY CG
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 452 AIGEACTVFNEMKFYKDVITWNAM---------------------------------IGG 478
+G+A +F+EM KDV WNA+ I G
Sbjct: 166 GLGDARKMFDEM-LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISG 224
Query: 479 YASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEP 538
YA G A +A+E+F++M + P +T ++VL+ACA G +E G R S ++ G+
Sbjct: 225 YAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER-ICSYVDHRGMNR 283
Query: 539 RVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
V + +D+ + G + +A+D+ + + + W ++ HG+
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNER-NVVTWTTIIAGLATHGH 331
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 55/291 (18%)
Query: 34 SLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM 93
S +H I G L +AR FD M ++ WN L++G+ K E+ +AR L + M
Sbjct: 149 SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 94 P--QRDIVSWNLIISGYF-SCCGSKFVEEGRKLFDEMPERDCVSW--------------- 135
P R+ VSW +ISGY S S+ +E +++ E E D V+
Sbjct: 209 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLEL 268
Query: 136 --------------------NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
N VI YAK+G + +AL +F+ + ERN V+ +I G
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLAT 328
Query: 176 NGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
+G A+ F RM + + + A++S G +D+ L G H +
Sbjct: 329 HGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR-LFNSMRSKYGIHPNI 387
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
+ Y +I G++GK+ EA + +P F+ N W S++
Sbjct: 388 EHYGCMIDLLGRAGKLREADEVIKSMP------------FKANAAIWGSLL 426
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 274/527 (51%), Gaps = 32/527 (6%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL-NGDVD--SAVGF--FKRMP 190
N ++ Y K D A KLFD MP RN V+ N +I G + +GD + + +GF R+
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 191 ECDSASLSALISGLVR--NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVE 248
D + GL+R +M AGI L C +G +L+ YG+ G +
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER---- 304
EARR+F+ + + R++V WN+++ YV G I A L MG
Sbjct: 195 EARRVFEAVLD-------------RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRF 241
Query: 305 --DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
D +++++S + + LFK D ++++ +A+ L A++ FE
Sbjct: 242 RGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG 422
M +N++SWN++I G+ +N + + A+ LF QM LE +PD T +SVLS C ++
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 423 KQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
KQ+ +VTK D L + NSLI+ YSR G + EA F+ ++ D+++W ++IG AS
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALAS 420
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
HG A ++L++F+ M + K+ P ITF+ VL+AC+H GLV+EG R F M Y IE E
Sbjct: 421 HGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDE 479
Query: 542 HFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISL 601
H+ +D+LGR G + EA D++NSMP +P A G C +H E + A+ L+ +
Sbjct: 480 HYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEI 539
Query: 602 EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNV--KKQTGYSWV 646
EP Y +L N Y + W+ A +R E +N K G SW+
Sbjct: 540 EPTKPVNYSILSNAYVSEGHWNQAALLRK-RERRNCYNPKTPGCSWL 585
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 225/507 (44%), Gaps = 64/507 (12%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAK----------ARQL 89
NK + + +A FD M RN VTWN LI G ++R +R L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 90 FDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKN 145
F ++ D VS+ +I C S ++ G +L M E C +++ Y K
Sbjct: 135 FTDV-SLDHVSFMGLIR---LCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKC 190
Query: 146 GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP------ECDSASLSA 199
G + +A ++F+A+ +R+ V NA+++ ++LNG +D A G K M D + S+
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 200 LISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPN 259
L+S R + IL + + D+ A L+ Y +S + +AR F+ +
Sbjct: 251 LLSA-CRIEQGKQIHAILFKVS----YQFDIPVA-TALLNMYAKSNHLSDARECFESM-- 302
Query: 260 DQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISG 315
RNVVSWN+M++ + + G+ A LF M + D + +++S
Sbjct: 303 -----------VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 316 YVQIS---DMEEASKLFKEMPSPDALS-WNSIISGFAQIGDLKVAKDFFERMPQKNLISW 371
+ S ++++ + + S D LS NS+IS +++ G+L A F + + +L+SW
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSW 411
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLVD--LYLGKQMHQ 427
S+I + + ++++F M L+ +PD+ T VLS C+ GLV L K+M +
Sbjct: 412 TSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 428 LVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVD 487
+ + LI + R G I EA V N M A GG H +
Sbjct: 471 FY--KIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIH----E 524
Query: 488 ALELFK--QMKRLKIHPTYITFISVLN 512
E K K L+I PT S+L+
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILS 551
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 28 TNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKAR 87
T + L N IS R G LSEA F S++ + V+W ++I ++
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 88 QLFDEMPQR---DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVI 139
Q+F+ M Q+ D +++ ++S +C V+EG + F M E + + +I
Sbjct: 429 QMFESMLQKLQPDKITFLEVLS---ACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLI 485
Query: 140 SGYAKNGRMDQALKLFDAMPERNAVSSNAVITG 172
+ G +D+A + ++MP + + A TG
Sbjct: 486 DLLGRAGFIDEASDVLNSMPTEPSTHALAAFTG 518
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 252/494 (51%), Gaps = 62/494 (12%)
Query: 200 LISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPN 259
LI L + G+L A +L + + Q Y LI G + +A R+ I +
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESSPSQ------QTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 260 DQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQI 319
+ D ++ ++ Y +G + AR++FD +R WN +
Sbjct: 106 NGSD---------QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLA 156
Query: 320 SDMEEASKLFKEM----PSPDALSWNSIISG----------------------------- 346
EE L+ +M D ++ ++
Sbjct: 157 GHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSH 216
Query: 347 ----------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
+A+ G + A F MP +N++SW+++IA Y KN A+ F +M
Sbjct: 217 VYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 397 EGE--KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAI 453
E + P+ T+ SVL C L L GK +H + + + LP+ ++L+TMY RCG +
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKL 336
Query: 454 GEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNA 513
VF+ M +DV++WN++I Y HG A+++F++M PT +TF+SVL A
Sbjct: 337 EVGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA 573
C+H GLVEEG+R F +M D+GI+P++EH+A VD+LGR +L EA ++ M +P
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK 455
Query: 574 VWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLME 633
VWG+LLGSCR+HGNVELA+ A++ L +LEP+++G YVLL ++YA ++WD+ +RV+ L+E
Sbjct: 456 VWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Query: 634 EKNVKKQTGYSWVD 647
+ ++K G W++
Sbjct: 516 HRGLQKLPGRCWME 529
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 188/441 (42%), Gaps = 44/441 (9%)
Query: 68 VTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG-----SKFVEEGRK 122
++ N LI K ++ +A ++ + ++ L+I CCG S + R
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLIL----CCGHRSSLSDALRVHRH 102
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+ D ++D +I Y+ G +D A K+FD +R NA+ L G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 183 VGFFKRM----PECDSASLSALISGLVRNGEL--DMAAGILLECGDGDEGKHDLVQAYNT 236
+G + +M E D + + ++ V + + G + G V T
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
L+ Y + G V+ A +F +P RNVVSW++M+ CY K G A
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPV-------------RNVVSWSAMIACYAKNGKAFEALR 269
Query: 297 LF-DSMGERDTCAWN--TMISGYVQISDME--EASKLFKEMPSPDALS-----WNSIISG 346
F + M E + N TM+S + + E KL L +++++
Sbjct: 270 TFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTM 329
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+ + G L+V + F+RM ++++SWNSLI+ Y + K AI++F +M G P T
Sbjct: 330 YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTF 389
Query: 407 SSVLSVCT--GLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNE 462
SVL C+ GLV+ GK++ + + + + P + ++ + R + EA + +
Sbjct: 390 VSVLGACSHEGLVE--EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 463 MKFYKDVITWNAMIGGYASHG 483
M+ W +++G HG
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHG 468
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 30/300 (10%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM----PQRDIVSWNLII 105
G + AR FD + R WN L + L+ +M + D ++ ++
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 106 SGYFSC-CGSKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDAMPE 160
+ C + +G+++ + R S T++ YA+ G +D A +F MP
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKR-MPECDSASLSALISGLVRNGELDMAA---GI 216
RN VS +A+I + NG A+ F+ M E +S +++ V +AA G
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 217 LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
L+ G ++ + L+ YG+ GK+E +R+FDR+ + R+VV
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD-------------RDVV 352
Query: 277 SWNSMMMCYVKVGDIVSARELFDSM---GERDT-CAWNTMISGYVQISDMEEASKLFKEM 332
SWNS++ Y G A ++F+ M G T + +++ +EE +LF+ M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 39/233 (16%)
Query: 39 WNKKISHLIRTGRLSEA-RTFFDSMKHR-----NTVTWNTLISGHVKRREIAKARQLFDE 92
W+ I+ + G+ EA RTF + M+ N+VT +++ + + + +
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 93 MPQRDIVSWNLIISGY---FSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMD 149
+ +R + S +IS + CG +E G+++FD M +RD VSWN++IS Y +G
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGK--LEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGE 209
+A+++F+ M L NG + V F + C GLV G+
Sbjct: 369 KAIQIFEEM---------------LANGASPTPVTFVSVLGACSH-------EGLVEEGK 406
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
L E D G ++ Y ++ G++ +++EA ++ + + G
Sbjct: 407 R------LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPG 453
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 304/634 (47%), Gaps = 106/634 (16%)
Query: 72 TLISGHVKRREIAKARQL---FDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP 128
TLI + + ++A+QL F S +++IS Y + K P
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP 69
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAM------PERNAVSSNAVITGFLLNGDV--- 179
++W +VI + +AL F M P+ N S V+ + D+
Sbjct: 70 ---VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPS--VLKSCTMMMDLRFG 124
Query: 180 DSAVGFFKRMP-ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLI 238
+S GF R+ +CD L +G N ++M A +L
Sbjct: 125 ESVHGFIVRLGMDCD------LYTG---NALMNMYAKLL--------------------- 154
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGD-GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
G K+ +FD +P + G ED + C + G I S R +
Sbjct: 155 ---GMGSKISVGN-VFDEMPQRTSNSGDEDVK-----------AETCIMPFG-IDSVRRV 198
Query: 298 FDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDL 353
F+ M +D ++NT+I+GY Q E+A ++ +EM + PD+ + +S++ F++ D+
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 354 KVAKDF-----------------------------------FERMPQKNLISWNSLIAGY 378
K+ F R+ ++ ISWNSL+AGY
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDL 437
+N Y A+ LF QM KP SSV+ C L L+LGKQ+H V + ++
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
I ++L+ MYS+CG I A +F+ M D ++W A+I G+A HG +A+ LF++MKR
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVL-DEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
+ P + F++VL AC+H GLV+E FNSM YG+ +EH+A+ D+LGR G+L+
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 558 EAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYA 617
EA + I+ M V+P +VW LL SC VH N+ELA+ A+ + +++ E+ G YVL+ NMYA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 618 NLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+ W + ++R+ M +K ++K+ SW++ N+
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNK 591
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 170/402 (42%), Gaps = 79/402 (19%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
+ R F+ M ++ V++NT+I+G+ + A ++ EM D+ + +S
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 112 CGSKFVE--EGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
S++V+ +G+++ + + D ++++ YAK+ R++ + ++F + R+ +S
Sbjct: 252 F-SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPECD----SASLSALISGLVRNGELDMAA---GILL 218
N+++ G++ NG + A+ F++M + + S++I L + G +L
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
G G + + L+ Y + G ++ AR++FDR+ NV+
Sbjct: 371 RGGFGSN-----IFIASALVDMYSKCGNIKAARKIFDRM----------------NVL-- 407
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----S 334
D +W +I G+ EA LF+EM
Sbjct: 408 --------------------------DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG-------A 387
P+ +++ ++++ + +G + A +F M + + N + Y D G A
Sbjct: 442 PNQVAFVAVLTACSHVGLVDEAWGYFNSMTK--VYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 388 IELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
S+M +E P S++LS C+ +L L +++ + +
Sbjct: 500 YNFISKMCVE---PTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 63/232 (27%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNL 103
++ R+ ++ F + R+ ++WN+L++G+V+ +A +LF +M + V+++
Sbjct: 289 KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSS 348
Query: 104 IIS---------------GY-------------------FSCCGSKFVEEGRKLFDEMPE 129
+I GY +S CG+ ++ RK+FD M
Sbjct: 349 VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN--IKAARKIFDRMNV 406
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGF 185
D VSW +I G+A +G +A+ LF+ M + N V+ AV+T G VD A G+
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGY 466
Query: 186 FKRMPECDSASLSALISGLVRNGELDMAAGI--LLECGDGDEGKHDLVQAYN 235
F M + + GL N EL+ A + LL G GK L +AYN
Sbjct: 467 FNSMTK---------VYGL--NQELEHYAAVADLL----GRAGK--LEEAYN 501
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/420 (33%), Positives = 231/420 (55%), Gaps = 42/420 (10%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFK 330
FR ++V N+++ Y K G + AR++F+ M +RD W T+ISGY Q +A F
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 331 EM----PSPDALSWNSIISG-----------------------------------FAQIG 351
+M SP+ + +S+I + + G
Sbjct: 151 QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 210
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ A+ F+ + +N +SWN+LIAG+ + + A+ELF M +G +P + +S+
Sbjct: 211 LMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFG 270
Query: 412 VCTGLVDLYLGKQMHQLVTKTVIPDLPI-NNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C+ L GK +H + K+ + N+L+ MY++ G+I +A +F+ + +DV+
Sbjct: 271 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVV 329
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
+WN+++ YA HG +A+ F++M+R+ I P I+F+SVL AC+H+GL++EG + M
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM 389
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVEL 590
D GI P H+ + VD+LGR G L A+ I MP++P A+W ALL +CR+H N EL
Sbjct: 390 KKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 591 AQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSN 650
AA+ + L+P+ GP+V+LYN+YA+ W+DA RVR M+E VKK+ SWV+ N
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 42/394 (10%)
Query: 111 CCGSKFVEEGR----KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
C K + +GR + + D V NT+++ YAK G +++A K+F+ MP+R+ V+
Sbjct: 70 CTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTW 129
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA-------GILLE 219
+I+G+ + A+ FF +M + +S +++ + G ++
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
CG V + L+ Y + G +++A+ +FD + + RN VSWN
Sbjct: 190 CGFDSN-----VHVGSALLDLYTRYGLMDDAQLVFDALES-------------RNDVSWN 231
Query: 280 SMMMCYVKVGDIVSARELFDSM---GERDTCAWNTMISGYVQISDMEEASK-----LFKE 331
+++ + + A ELF M G R + + G + E K + K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKS 291
Query: 332 MPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELF 391
A + N+++ +A+ G + A+ F+R+ +++++SWNSL+ Y ++ K A+ F
Sbjct: 292 GEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF 351
Query: 392 SQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYS 448
+M+ G +P+ + SVL+ C +GL+D G ++L+ K ++P+ +++ +
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLD--EGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 449 RCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
R G + A EM W A++ H
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 170/398 (42%), Gaps = 58/398 (14%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N ++ + G L EAR F+ M R+ VTW TLISG+ + A F++M +
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 100 SWNLIISGYFS--------CCGSKF----VEEGRKLFDEMPERDCVSWNTVISGYAKNGR 147
+S CCG + V+ G FD + + ++ Y + G
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG---FDS----NVHVGSALLDLYTRYGL 211
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFK-------RMPECDSASLSAL 200
MD A +FDA+ RN VS NA+I G + A+ F+ R ASL
Sbjct: 212 MDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGA 271
Query: 201 IS--GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
S G + G+ A I G+ + A NTL+ Y +SG + +AR++FDR+
Sbjct: 272 CSSTGFLEQGKWVHAYMI-------KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GER-DTCAWNTMIS 314
+R+VVSWNS++ Y + G A F+ M G R + ++ ++++
Sbjct: 325 -------------KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLT 371
Query: 315 GYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLI 369
++E ++ M P+A + +++ + GDL A F E MP +
Sbjct: 372 ACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 431
Query: 370 SWNSLIAGYDKNEDYK-GAIELFSQMQLEGEKPDRHTL 406
W +L+ +++ + GA +L+ + P H +
Sbjct: 432 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 280/534 (52%), Gaps = 52/534 (9%)
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
LF + +N++I+G+ N + L LF ++ + G L+G
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKH----------GLYLHGFTFPL 116
Query: 183 VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
V + C AS R +D+ + ++++CG HD V A +L++ Y
Sbjct: 117 V-----LKACTRAS--------SRKLGIDLHS-LVVKCG----FNHD-VAAMTSLLSIYS 157
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG 302
SG++ +A +LFD IP+ R+VV+W ++ Y G A +LF M
Sbjct: 158 GSGRLNDAHKLFDEIPD-------------RSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 303 ER----DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLK 354
E D+ ++S V + D++ + K M ++ ++++ +A+ G ++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
A+ F+ M +K++++W+++I GY N K IELF QM E KPD+ ++ LS C
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 415 GLVDLYLGKQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
L L LG+ L+ + + +L + N+LI MY++CGA+ VF EMK KD++ N
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMN 383
Query: 474 AMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
A I G A +G + +F Q ++L I P TF+ +L C HAGL+++G R FN++
Sbjct: 384 AAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCV 443
Query: 534 YGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQV 593
Y ++ VEH+ VD+ GR G L +A LI MP++P+ VWGALL CR+ + +LA+
Sbjct: 444 YALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 594 AAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ LI+LEP ++G YV L N+Y+ WD+A VR +M +K +KK GYSW++
Sbjct: 504 VLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIE 557
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 165/393 (41%), Gaps = 55/393 (13%)
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
D+ + ++S Y GS + + KLFDE+P+R V+W + SGY +GR +A+ LF
Sbjct: 144 HDVAAMTSLLSIY---SGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLF 200
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
M E + DS + ++S V G+LD
Sbjct: 201 KKMVEMGV---------------------------KPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
I+ + + K+ V+ TL+ Y + GK+E+AR +FD + +++
Sbjct: 234 IVKYMEEMEMQKNSFVR--TTLVNLYAKCGKMEKARSVFDSM-------------VEKDI 278
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQIS------DMEE--ASK 327
V+W++M+ Y ELF M + + I G++ D+ E S
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 328 LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGA 387
+ + + N++I +A+ G + + F+ M +K+++ N+ I+G KN K +
Sbjct: 339 IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLS 398
Query: 388 IELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINN--SLIT 445
+F Q + G PD T +L C + G + ++ + + ++
Sbjct: 399 FAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVD 458
Query: 446 MYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
++ R G + +A + +M + I W A++ G
Sbjct: 459 LWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 142/373 (38%), Gaps = 94/373 (25%)
Query: 49 TGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY 108
+GRL++A FD + R+ VTW L SG+ +A LF +M + + + I
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 109 FSCCGS-----------KFVEE-------------------------GRKLFDEMPERDC 132
S C K++EE R +FD M E+D
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFL------------------ 174
V+W+T+I GYA N + ++LF M + N I GFL
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 175 ------------LNGDVD-------SAVGF--FKRMPECDSASLSALISGLVRNGELDMA 213
N +D A GF FK M E D ++A ISGL +NG + ++
Sbjct: 339 IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLS 398
Query: 214 AGILLEC---GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
+ + G +G + L+ G +G +++ R F+ I
Sbjct: 399 FAVFGQTEKLGISPDG-----STFLGLLCGCVHAGLIQDGLRFFNAISCVYA-------- 445
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-DTCAWNTMISGYVQISDMEEASKLF 329
+R V + M+ + + G + A L M R + W ++SG + D + A +
Sbjct: 446 LKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVL 505
Query: 330 KEMPSPDALSWNS 342
KE+ + + WN+
Sbjct: 506 KELIALEP--WNA 516
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G++ +AR+ FDSM ++ VTW+T+I G+ + +LF +M Q ++ I G
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVG 318
Query: 108 YFSCCGS----KFVEEGRKLFDEMP-ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
+ S C S E G L D + N +I YAK G M + ++F M E++
Sbjct: 319 FLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKD 378
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGIL- 217
V NA I+G NG V + F + + D ++ L+ G V G +
Sbjct: 379 IVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN 438
Query: 218 -LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
+ C + V+ Y ++ +G++G +++A RL +P R N +
Sbjct: 439 AISCVYALKRT---VEHYGCMVDLWGRAGMLDDAYRLICDMP------------MRPNAI 483
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
W +++ V D A + + + WN YVQ+S++
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALE--PWNA--GNYVQLSNI 525
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 245/455 (53%), Gaps = 55/455 (12%)
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
+N L+ Y + G + +AR++FD +PN R++ SWN M+ Y +VG +
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPN-------------RDLCSWNVMVNGYAEVGLLEE 169
Query: 294 ARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP-------------------- 333
AR+LFD M E+D+ +W M++GYV+ EEA L+ M
Sbjct: 170 ARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAA 229
Query: 334 --------------------SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNS 373
D + W+S++ + + G + A++ F+++ +K+++SW S
Sbjct: 230 AVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTS 289
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTV 433
+I Y K+ ++ LFS++ E+P+ +T + VL+ C L LGKQ+H +T+
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 434 I-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF 492
P ++SL+ MY++CG I A V + D+++W ++IGG A +G +AL+ F
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEALKYF 408
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
+ + P ++TF++VL+AC HAGLVE+G F S+ + + +H+ VD+L R
Sbjct: 409 DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLAR 468
Query: 553 QGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLL 612
G+ ++ +I+ MP+KP K +W ++LG C +GN++LA+ AAQ L +EPE+ YV +
Sbjct: 469 SGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTM 528
Query: 613 YNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
N+YA W++ ++R M+E V K+ G SW +
Sbjct: 529 ANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTE 563
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 45/368 (12%)
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
K Y LI Q+ +EE +++ + I F +V WN ++ Y
Sbjct: 80 AKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG---------FVPGIVIWNRLLRMY 130
Query: 286 VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIIS 345
K G +V AR++FD M RD C+WN M++GY ++ +EEA KLF EM D+ SW ++++
Sbjct: 131 AKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVT 190
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ-LEGEKPDRH 404
G+ V KD P++ L+ L+S MQ + +P+
Sbjct: 191 GY-------VKKD----QPEEALV--------------------LYSLMQRVPNSRPNIF 219
Query: 405 TLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM 463
T+S ++ + + GK++H +V + D + +SL+ MY +CG I EA +F+++
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Query: 464 KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
KDV++W +MI Y + LF ++ P TF VLNACA E G
Sbjct: 280 -VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELG 338
Query: 524 RRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCR 583
+Q + + G +P +S VD+ + G ++ A +++ P KPD W +L+G C
Sbjct: 339 -KQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCA 396
Query: 584 VHGNVELA 591
+G + A
Sbjct: 397 QNGQPDEA 404
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 235/501 (46%), Gaps = 60/501 (11%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRD----IVSWNLIISG 107
L EA K T+ LI + R + + +++ + + IV WN ++
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 108 YFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN 167
Y C GS + + RK+FDEMP RD SWN +++GYA+ G +++A KLFD M E+++ S
Sbjct: 130 YAKC-GS--LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 168 AVITGFLLNGDVDSAVGFF---KRMPECDSASLSALI-------SGLVRNGELDMAAGIL 217
A++TG++ + A+ + +R+P + I +R G+ ++ I+
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK-EIHGHIV 245
Query: 218 LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
D DE +++L+ YG+ G ++EAR +FD+I ++VVS
Sbjct: 246 RAGLDSDE------VLWSSLMDMYGKCGCIDEARNIFDKI-------------VEKDVVS 286
Query: 278 WNSMMMCYVKVGDIVSARELFDSM---GER-DTCAWNTMISGYVQISDMEEASKLFKEMP 333
W SM+ Y K LF + ER + + +++ ++ E ++ M
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMT 346
Query: 334 ----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
P + + +S++ + + G+++ AK + P+ +L+SW SLI G +N A++
Sbjct: 347 RVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALK 406
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCT--GLVD-----LYLGKQMHQLVTKTVIPDLPINNS 442
F + G KPD T +VLS CT GLV+ Y + H+L +
Sbjct: 407 YFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS-----DHYTC 461
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
L+ + +R G + +V +EM W +++GG +++G A E +++ KI P
Sbjct: 462 LVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL--FKIEP 519
Query: 503 -TYITFISVLNACAHAGLVEE 522
+T++++ N A AG EE
Sbjct: 520 ENPVTYVTMANIYAAAGKWEE 540
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 192/467 (41%), Gaps = 102/467 (21%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN+ + + G L +AR FD M +R+ +WN +++G+ + + +AR+LFDEM ++D
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS 182
Query: 99 VSWNLIISGYFS---------------------------------CCGSKFVEEGRKLFD 125
SW +++GY K + G+++
Sbjct: 183 YSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHG 242
Query: 126 EMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
+ + D V W++++ Y K G +D+A +FD + E++ VS ++I + +
Sbjct: 243 HIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWRE 302
Query: 182 AVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGD-GDEGKHDLVQAYNTLIAG 240
F S L+ R E AG+L C D E V Y T +
Sbjct: 303 GFSLF-----------SELVGSCERPNEYTF-AGVLNACADLTTEELGKQVHGYMTRVG- 349
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
F + +S++ Y K G+I SA+ + D
Sbjct: 350 ------------------------------FDPYSFASSSLVDMYTKCGNIESAKHVVDG 379
Query: 301 MGERDTCAWNTMISGYVQISDMEEASKLF----KEMPSPDALSWNSIISGFAQIGDLKVA 356
+ D +W ++I G Q +EA K F K PD +++ +++S G ++
Sbjct: 380 CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Query: 357 KDFFERMPQKNLISWNS--------LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+FF + +K+ +S S L+A + E K I S+M + KP + +S
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI---SEMPM---KPSKFLWAS 493
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGE 455
VL C+ ++ L ++ Q + K + P+ P+ + +TM + A G+
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFK-IEPENPV--TYVTMANIYAAAGK 537
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 154/378 (40%), Gaps = 74/378 (19%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
L WN ++ G L EAR FD M +++ +W +++G+VK+ + +A L+ M +
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 96 ----------------------------------------RDIVSWNLIISGYFSCCGSK 115
D V W+ ++ Y C
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC---G 267
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
++E R +FD++ E+D VSW ++I Y K+ R + LF + + G +L
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAG-VL 326
Query: 176 NGDVDSAV--------GFFKRMP-ECDSASLSALISGLVRNGELDMAAGILLECGDGDEG 226
N D G+ R+ + S + S+L+ + G ++ A ++ C
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC-----P 381
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV 286
K DLV ++ +LI G Q+G+ +EA + FD + + K D +V N + C
Sbjct: 382 KPDLV-SWTSLIGGCAQNGQPDEALKYFDLLL--KSGTKPD------HVTFVNVLSAC-T 431
Query: 287 KVGDIVSARELFDSMGERDTCA-----WNTMISGYVQISDMEEASKLFKEMP-SPDALSW 340
G + E F S+ E+ + + ++ + E+ + EMP P W
Sbjct: 432 HAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLW 491
Query: 341 NSIISGFAQIGDLKVAKD 358
S++ G + G++ +A++
Sbjct: 492 ASVLGGCSTYGNIDLAEE 509
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 258/477 (54%), Gaps = 25/477 (5%)
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG---ILLECG-DGDEGKHDLVQAYN 235
D ++ F+ E + L+ALI GL N + + ++L G D V N
Sbjct: 77 DYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 236 TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
+ + G+ G+ A L + + D F R S++ Y K G + A
Sbjct: 137 SKL-GFRWLGRALHAATLKNFVDCDS---------FVRL-----SLVDMYAKTGQLKHAF 181
Query: 296 ELF----DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIG 351
++F D + + WN +I+GY + DM A+ LF+ MP ++ SW+++I G+ G
Sbjct: 182 QVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSG 241
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+L AK FE MP+KN++SW +LI G+ + DY+ AI + +M +G KP+ +T+++VLS
Sbjct: 242 ELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLS 301
Query: 412 VCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C+ L G ++H + I D I +L+ MY++CG + A TVF+ M +KD++
Sbjct: 302 ACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN-HKDIL 360
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
+W AMI G+A HG A++ F+QM P + F++VL AC ++ V+ G F+SM
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVEL 590
DY IEP ++H+ VD+LGR G+L EA +L+ +MP+ PD W AL +C+ H
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRR 480
Query: 591 AQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
A+ +Q L+ L+PE G Y+ L +A+ D E+ R+ ++++ ++ G+S+++
Sbjct: 481 AESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE 537
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 191/456 (41%), Gaps = 74/456 (16%)
Query: 81 REIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS--KFVEEGRKLFDEMPERDCVSWNTV 138
++ A R + ++ +R ++S ++ C S K + +F ER+ N +
Sbjct: 40 KDTASLRHVHAQILRRGVLSSR--VAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNAL 97
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGF-----------FK 187
I G +N R + +++ F M R V + + F+L +S +GF K
Sbjct: 98 IRGLTENARFESSVRHFILML-RLGVKPDRLTFPFVLKS--NSKLGFRWLGRALHAATLK 154
Query: 188 RMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKV 247
+CDS +L+ + G+L A + E D K + + +N LI GY ++ +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEE--SPDRIKKESILIWNVLINGYCRAKDM 212
Query: 248 EEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC 307
A LF +P RN SW++++ YV G++ A++LF+ M E++
Sbjct: 213 HMATTLFRSMPE-------------RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 308 AWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISG----------------- 346
+W T+I+G+ Q D E A + EM P+ + +++S
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 347 ------------------FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAI 388
+A+ G+L A F M K+++SW ++I G+ + + AI
Sbjct: 320 LDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAI 379
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITM 446
+ F QM GEKPD +VL+ C + VDL L + + P L ++ +
Sbjct: 380 QCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDL 439
Query: 447 YSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
R G + EA + M D+ TW A+ +H
Sbjct: 440 LGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 167/345 (48%), Gaps = 39/345 (11%)
Query: 72 TLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEM 127
+L+ + K ++ A Q+F+E P R I+ WN++I+GY C +K + LF M
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY---CRAKDMHMATTLFRSM 222
Query: 128 PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFK 187
PER+ SW+T+I GY +G +++A +LF+ MPE+N VS +I GF GD ++A+ +
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 188 RMPE----CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT-LIAGYG 242
M E + +++A++S ++G L +GI + D G L +A T L+ Y
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGAL--GSGIRIHGYILDNGI-KLDRAIGTALVDMYA 339
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM- 301
+ G+++ A +F + + ++++SW +M+ + G A + F M
Sbjct: 340 KCGELDCAATVFSNMNH-------------KDILSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 302 --GER-DTCAWNTMISGYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDL 353
GE+ D + +++ + S+++ F M P + ++ + G L
Sbjct: 387 YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKL 446
Query: 354 KVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
A + E MP +L +W +L ++ Y+ A E SQ LE
Sbjct: 447 NEAHELVENMPINPDLTTWAALYRACKAHKGYRRA-ESVSQNLLE 490
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 40/316 (12%)
Query: 48 RTGRLSEARTFF----DSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNL 103
+TG+L A F D +K + + WN LI+G+ + +++ A LF MP+R+ SW+
Sbjct: 173 KTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWST 232
Query: 104 IISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
+I GY S + ++LF+ MPE++ VSW T+I+G+++ G + A+ + M E+
Sbjct: 233 LIKGYVD---SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGL 289
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMP--------ECDSASLSALISGLVRNGELDMAAG 215
+ I L A+G R+ + D A +AL+ + GELD AA
Sbjct: 290 KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAAT 349
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
+ H + ++ +I G+ G+ +A + F ++ E
Sbjct: 350 VF------SNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDE--------- 394
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD-------MEEASKL 328
V + +++ + ++ FDSM R A + YV + D + EA +L
Sbjct: 395 VVFLAVLTACLNSSEVDLGLNFFDSM--RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Query: 329 FKEMP-SPDALSWNSI 343
+ MP +PD +W ++
Sbjct: 453 VENMPINPDLTTWAAL 468
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 43/261 (16%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN I+ R + A T F SM RN+ +W+TLI G+V E+ +A+QLF+ MP++++
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
Query: 99 VSWNLIISGYFSCCGS---------KFVEEGRK--------------------------- 122
VSW +I+G FS G + +E+G K
Sbjct: 259 VSWTTLING-FSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHG 317
Query: 123 -LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
+ D + D ++ YAK G +D A +F M ++ +S A+I G+ ++G
Sbjct: 318 YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQ 377
Query: 182 AVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
A+ F++M + D A+++ + + E+D+ + D ++ Y +
Sbjct: 378 AIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN-FFDSMRLDYAIEPTLKHYVLV 436
Query: 238 IAGYGQSGKVEEARRLFDRIP 258
+ G++GK+ EA L + +P
Sbjct: 437 VDLLGRAGKLNEAHELVENMP 457
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 313/630 (49%), Gaps = 42/630 (6%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRD-- 97
N + LI G L AR FD M H + V+W ++I +V +A LF M D
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 98 IVSWNLIISGYFSCCG-SKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQAL 152
+ ++S CG S + G L + +S ++++ Y + G++D++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
++F MP RNAV+ A+ITG + G + +F M S LS + + L
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR--SEELSDTYTFAI---ALKA 218
Query: 213 AAGILLECGDGDEGKHDLVQAY-------NTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
AG+ H +V+ + N+L Y + G++++ LF+ +
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS------- 271
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC----AWNTMISGYVQISD 321
R+VVSW S+++ Y ++G V A E F M + +M S +S
Sbjct: 272 ------ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSR 325
Query: 322 MEEASKLFKEMPS---PDALSW-NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAG 377
+ +L + S D+LS NS++ ++ G+L A F+ M +++ISW+++I G
Sbjct: 326 LVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGG 385
Query: 378 YDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQL-VTKTVIPD 436
Y + + + FS M+ G KP L+S+LSV + + G+Q+H L + + +
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
+ +SLI MYS+CG+I EA +F E D+++ AMI GYA HG + +A++LF++
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 497 RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQL 556
++ P +TFISVL AC H+G ++ G FN M Y + P EH+ VD+L R G+L
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 557 QEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMY 616
+A +IN M K D VW LL +C+ G++E + AA+ ++ L+P + V L N+Y
Sbjct: 565 SDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY 624
Query: 617 ANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
++ ++A VR M+ K V K+ G+S +
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEPGWSSI 654
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 126/553 (22%), Positives = 221/553 (39%), Gaps = 108/553 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFDEMP 94
W I+ L+ GR E T+F M +T T+ + R++ + + +
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 95 QRDIVSWNLI---ISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
R V+ + ++ ++ CG +++G LF+ M ERD VSW ++I Y + G+ +A
Sbjct: 237 VRGFVTTLCVANSLATMYTECGE--MQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 152 LKLFDAMPERNA-VSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGEL 210
++ F M RN+ V N + + + + C+ SL S V N +
Sbjct: 295 VETFIKM--RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMM 352
Query: 211 DM--------AAGILLE---CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPN 259
M +A +L + C D + +++T+I GY Q+G EE + F +
Sbjct: 353 KMYSTCGNLVSASVLFQGMRCRD--------IISWSTIIGGYCQAGFGEEGFKYFSWM-R 403
Query: 260 DQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQI 319
G D VS N M ++ G V A L + E+++ +++I+ Y +
Sbjct: 404 QSGTKPTDFALASLLSVSGN---MAVIEGGRQVHALALCFGL-EQNSTVRSSLINMYSKC 459
Query: 320 SDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYD 379
++EAS +F E D +S ++I+G+A+ G K A D FE+ SL G+
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK----------SLKVGF- 508
Query: 380 KNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDL 437
+PD T SVL+ CT L LG ++ +T + P
Sbjct: 509 --------------------RPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK 548
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
++ + R G + +A + NEM + KD + W
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWT------------------------ 584
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR-VEHFASFVDILGRQGQL 556
++L AC G +E GRR ++ ++P + +I G L
Sbjct: 585 -----------TLLIACKAKGDIERGRRAAERILE---LDPTCATALVTLANIYSSTGNL 630
Query: 557 QEAMDLINSMPVK 569
+EA ++ +M K
Sbjct: 631 EEAANVRKNMKAK 643
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/624 (26%), Positives = 318/624 (50%), Gaps = 40/624 (6%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNL 103
+ G L+ AR F+ M+ R+ V W +I + + + +A L +EM + I V+
Sbjct: 93 KFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLE 152
Query: 104 IISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
++SG + + + ++ + D N++++ Y K + A LFD M +R+
Sbjct: 153 MLSGVLEITQLQCLHDFAVIYG--FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDM 210
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRM------PECDSASLSALISGLVRNGELDMAAGIL 217
VS N +I+G+ G++ + RM P+ + S +SG + D+ G +
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTM----CDLEMGRM 266
Query: 218 LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
L C G + LI Y + GK E + R+ + IPN ++VV
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN-------------KDVVC 313
Query: 278 WNSMMMCYVKVG----DIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL----F 329
W M+ +++G ++ E+ S + + A ++++ Q+ + + +
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 330 KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
+ + D + NS+I+ +A+ G L + FERM +++L+SWN++I+GY +N D A+
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 390 LFSQMQLEG-EKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMY 447
LF +M+ + ++ D T+ S+L C+ L +GK +H +V ++ I P ++ +L+ MY
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
S+CG + A F+ + +KDV++W +I GY HG ALE++ + + P ++ F
Sbjct: 494 SKCGYLEAAQRCFDSIS-WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIF 552
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
++VL++C+H G+V++G + F+SM+ D+G+EP EH A VD+L R ++++A
Sbjct: 553 LAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENF 612
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAER 627
+P V G +L +CR +G E+ + + +I L+P +G YV L + +A ++ WDD
Sbjct: 613 TRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSE 672
Query: 628 VRVLMEEKNVKKQTGYSWVDSSNR 651
M +KK G+S ++ + +
Sbjct: 673 SWNQMRSLGLKKLPGWSKIEMNGK 696
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 40/338 (11%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM------ 332
+S++ Y K G + AR++F+ M ERD W MI Y + + EA L EM
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 333 PSP------------------------------DALSWNSIISGFAQIGDLKVAKDFFER 362
P P D NS+++ + + + AKD F++
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQ 204
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG 422
M Q++++SWN++I+GY + ++L +M+ +G +PD+ T + LSV + DL +G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 423 KQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
+ +H + KT D+ + +LITMY +CG EA E KDV+ W MI G
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGK-EEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
G A AL +F +M + + SV+ +CA G + G + + +G
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG-ASVHGYVLRHGYTLDTP 382
Query: 542 HFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
S + + + G L +++ + M + D W A++
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNER-DLVSWNAII 419
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 186/405 (45%), Gaps = 57/405 (14%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM------ 93
N ++ + + +A+ FD M+ R+ V+WNT+ISG+ +++ +L M
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR 242
Query: 94 PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMD 149
P + +L +SG + C +E GR L ++ + D +I+ Y K G+ +
Sbjct: 243 PDQQTFGASLSVSG--TMCD---LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLV 205
+ ++ + +P ++ V +I+G + G + A+ F M + S +++++++
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 206 RNGELDMAAGILLECGDGDEGKHDL---VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
+ G D+ A + G +H A N+LI Y + G ++++ +F+R+
Sbjct: 358 QLGSFDLGASV-----HGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN---- 408
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
R++VSWN+++ Y + D+ A LF+ M + + + +S +
Sbjct: 409 ---------ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV----QQVDSFTVVSLL 455
Query: 323 EEASK-------------LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
+ S + + P +L +++ +++ G L+ A+ F+ + K+++
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
SW LIAGY + A+E++S+ G +P+ +VLS C+
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 134/267 (50%), Gaps = 7/267 (2%)
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
S D +S+++ +A+ G L A+ FE M +++++ W ++I Y + A L ++
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQL-VTKTVIPDLPINNSLITMYSRCGA 452
M+ +G KP TL +LS G++++ + +H V D+ + NS++ +Y +C
Sbjct: 138 MRFQGIKPGPVTLLEMLS---GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
+G+A +F++M+ +D+++WN MI GYAS G + L+L +M+ + P TF + L+
Sbjct: 195 VGDAKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDK 572
+E G R + I G + + + + + + G+ + + ++ ++P K D
Sbjct: 254 VSGTMCDLEMG-RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK-DV 311
Query: 573 AVWGALLGSCRVHGNVELAQVAAQALI 599
W ++ G E A + ++
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEML 338
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLV 429
+NS I + D+K + FS M PD T S+L C L L G +H Q++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 430 TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDAL 489
D I++SL+ +Y++ G + A VF EM+ +DV+ W AMIG Y+ G+ +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR-ERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 490 ELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ-FNSMINDYGIEPRVEHFASFVD 548
L +M+ I P +T + +L +G++E + Q + YG + + S ++
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
+ + + +A DL + M + D W ++ GN+
Sbjct: 188 LYCKCDHVGDAKDLFDQME-QRDMVSWNTMISGYASVGNM 226
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 25/260 (9%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
+H I+ ++ G+ + +++ +++ V W +ISG ++ KA +F EM Q
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 96 R-DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQ 150
+S I S SC + G + + D + N++I+ YAK G +D+
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 151 ALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP-----ECDSASLSALISGLV 205
+L +F+ M ER+ VS NA+I+G+ N D+ A+ F+ M + DS ++ +L+
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 206 RNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
G L G L+ C L+ Y + G +E A+R FD I
Sbjct: 460 SAGAL--PVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSIS------- 510
Query: 266 EDGRRFRRNVVSWNSMMMCY 285
++VVSW ++ Y
Sbjct: 511 ------WKDVVSWGILIAGY 524
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 45/193 (23%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ + G L ++ F+ M R+ V+WN +ISG+ + ++ KA LF+EM + +
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 100 SWN-------------------------LIISGY--------------FSCCGSKFVEEG 120
+ ++I + +S CG ++E
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCG--YLEAA 502
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVITGFLLN 176
++ FD + +D VSW +I+GY +G+ D AL+++ E N V AV++ N
Sbjct: 503 QRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHN 562
Query: 177 GDVDSAVGFFKRM 189
G V + F M
Sbjct: 563 GMVQQGLKIFSSM 575
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 189/622 (30%), Positives = 307/622 (49%), Gaps = 42/622 (6%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNL 103
+ G L +A FD M R+ V W +ISGHV+ E +M D +
Sbjct: 173 KCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 104 IISGYFSCCGSKFVEEGRKLFDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDAMP 159
+ G+ +C ++EGR L + S +++ S Y+K+G +A F +
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
+ + S ++I +GD++ + F M +IS L+ ++ +L+
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLIN----ELGKMMLVP 348
Query: 220 CGDGDEG---KHDLV---QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
G G +H N+L++ Y + + A +LF RI E+G
Sbjct: 349 QGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRI-------SEEG----- 396
Query: 274 NVVSWNSMMMCYVKVGDIVSARELF---DSMG-ERDTCAWNTMISGYVQISDMEEASKL- 328
N +WN+M+ Y K+ V ELF ++G E D+ + ++IS I + L
Sbjct: 397 NKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLH 456
Query: 329 ---FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
K NS+I + ++GDL VA F N+I+WN++IA Y E +
Sbjct: 457 CYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSE 515
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLI 444
AI LF +M E KP TL ++L C L G+ +H+ +T+T +L ++ +LI
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI 575
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
MY++CG + ++ +F+ KD + WN MI GY HG A+ LF QM+ + PT
Sbjct: 576 DMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
TF+++L+AC HAGLVE+G++ F M + Y ++P ++H++ VD+L R G L+EA +
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 565 SMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDD 624
SMP PD +WG LL SC HG E+ A+ ++ +P++ G Y++L NMY+ W++
Sbjct: 694 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEE 753
Query: 625 AERVRVLMEEKNVKKQTGYSWV 646
AER R +M E V K+ G+S V
Sbjct: 754 AERAREMMRESGVGKRAGHSVV 775
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
+IS +A G ++ F + ++++ WNS+I + N DY ++ F M L G+ PD
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPD 124
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD--LPINNSLITMYSRCGAIGEACTVF 460
T V+S C L+ ++G +H LV K D + S + YS+CG + +AC VF
Sbjct: 125 HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVF 184
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI---HPTYITFISVLNACAHA 517
+EM +DV+ W A+I G+ +G + L +M P T AC++
Sbjct: 185 DEMP-DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNL 243
Query: 518 GLVEEGR 524
G ++EGR
Sbjct: 244 GALKEGR 250
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 199/495 (40%), Gaps = 79/495 (15%)
Query: 19 SRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLI 74
S SF + D + + W I+ L R+G + E+ F M+ H + V + LI
Sbjct: 282 SEAYLSFRELGDED---MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI 338
Query: 75 SGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER 130
+ K + + + + + D N ++S Y C + + KLF + E
Sbjct: 339 NELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMY---CKFELLSVAEKLFCRISEE 395
Query: 131 -DCVSWNTVISGYAKNGRMDQALKLF----------DAMPERNAVSSNAVITGFLLNGDV 179
+ +WNT++ GY K + ++LF D+ + +SS + I LL +
Sbjct: 396 GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSL 455
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
V K + + +++LI + G+L +A + E V +N +IA
Sbjct: 456 HCYV--VKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTN-------VITWNAMIA 506
Query: 240 GYGQSGKVEEARRLFDRIPND-----------------QGDGKEDGRRFRR--------- 273
Y + E+A LFDR+ ++ E G+ R
Sbjct: 507 SYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM 566
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP 333
N+ +++ Y K G + +RELFD+ ++D WN MISGY D+E A LF +M
Sbjct: 567 NLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQME 626
Query: 334 ----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQ----KNLISWNSLIAGYDKNEDYK 385
P ++ +++S G ++ K F +M Q NL ++ L+ ++ + +
Sbjct: 627 ESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLE 686
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNS--- 442
A M PD ++LS C + +G +M + + V D P N+
Sbjct: 687 EAESTVMSMPF---SPDGVIWGTLLSSCMTHGEFEMGIRMAE---RAVASD-PQNDGYYI 739
Query: 443 -LITMYSRCGAIGEA 456
L MYS G EA
Sbjct: 740 MLANMYSAAGKWEEA 754
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/313 (41%), Positives = 204/313 (65%), Gaps = 3/313 (0%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
NS++ +A GD+ A F++MP+K+L++WNS+I G+ +N + A+ L+++M +G K
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTV 459
PD T+ S+LS C + L LGK++H + K + +L +N L+ +Y+RCG + EA T+
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHPTYITFISVLNACAHAG 518
F+EM K+ ++W ++I G A +G +A+ELFK M+ + + P ITF+ +L AC+H G
Sbjct: 147 FDEM-VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
+V+EG F M +Y IEPR+EHF VD+L R GQ+++A + I SMP++P+ +W L
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 579 LGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
LG+C VHG+ +LA+ A ++ LEP SG YVLL NMYA+ + W D +++R M VK
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 639 KQTGYSWVDSSNR 651
K G+S V+ NR
Sbjct: 326 KVPGHSLVEVGNR 338
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 116/268 (43%), Gaps = 44/268 (16%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS---- 334
NS++ Y GD+ SA ++FD M E+D AWN++I+G+ + EEA L+ EM S
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 335 PDALSWNSIISGFAQIGDLKV-----------------------------------AKDF 359
PD + S++S A+IG L + AK
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ-LEGEKPDRHTLSSVLSVCT--GL 416
F+ M KN +SW SLI G N K AIELF M+ EG P T +L C+ G+
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 417 VDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
V + P + ++ + +R G + +A M +V+ W ++
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTY 504
G HG + L F +++ L++ P +
Sbjct: 267 GACTVHGDS--DLAEFARIQILQLEPNH 292
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 94/172 (54%), Gaps = 4/172 (2%)
Query: 416 LVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
+ D+ LG+ +H +V ++ L + NSL+ +Y+ CG + A VF++M KD++ WN+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNS 59
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
+I G+A +G +AL L+ +M I P T +S+L+ACA G + G+R MI
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-V 118
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
G+ + +D+ R G+++EA L + M V + W +L+ V+G
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 141/332 (42%), Gaps = 73/332 (21%)
Query: 109 FSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNA 168
++ CG V K+FD+MPE+D V+WN+VI+G+A+NG+ ++AL L+ M +
Sbjct: 33 YANCGD--VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 169 VITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKH 228
I L A+ KR+ + + GL RN
Sbjct: 91 TIVSLLSACAKIGALTLGKRV------HVYMIKVGLTRN--------------------- 123
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKV 288
+ + N L+ Y + G+VEEA+ LFD + + +N VSW S+++
Sbjct: 124 --LHSSNVLLDLYARCGRVEEAKTLFDEMVD-------------KNSVSWTSLIVGLAVN 168
Query: 289 GDIVSARELFDSMGERD--------------TCAWNTMIS-GYVQISDMEEASKLFKEMP 333
G A ELF M + C+ M+ G+ M E K+
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI----- 223
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFS 392
P + ++ A+ G +K A ++ + MP Q N++ W +L+ + D + F+
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD--SDLAEFA 281
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
++Q+ +P+ H+ VL L ++Y +Q
Sbjct: 282 RIQILQLEPN-HSGDYVL-----LSNMYASEQ 307
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 34 SLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM 93
SL++ N + G ++ A FD M ++ V WN++I+G + + +A L+ EM
Sbjct: 21 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 80
Query: 94 PQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRM 148
+ I I S C + G+++ M + R+ S N ++ YA+ GR+
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
++A LFD M ++N+VS ++I G +NG A+ FK M
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 21/252 (8%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER 130
N+L+ + ++A A ++FD+MP++D+V+WN +I+G F+ G EE L+ EM +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING-FAENGKP--EEALALYTEMNSK 83
Query: 131 ----DCVSWNTVISGYAKNGRMDQALKLFDAMPE----RNAVSSNAVITGFLLNGDVDSA 182
D + +++S AK G + ++ M + RN SSN ++ + G V+ A
Sbjct: 84 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 143
Query: 183 VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
F M + +S S ++LI GL NG A L + + EG + ++
Sbjct: 144 KTLFDEMVDKNSVSWTSLIVGLAVNG-FGKEAIELFKYMESTEGLLPCEITFVGILYACS 202
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG 302
G V+E F R+ + + + + M+ + G + A E SM
Sbjct: 203 HCGMVKEGFEYFRRMREEY--------KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 254
Query: 303 -ERDTCAWNTMI 313
+ + W T++
Sbjct: 255 MQPNVVIWRTLL 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
LH N + R GR+ EA+T FD M +N+V+W +LI G +A +LF M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 96 RD-IVSWNLIISG-YFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRM 148
+ ++ + G ++C V+EG + F M E + + ++ A+ G++
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 149 DQALKLFDAMP-ERNAVSSNAVITGFLLNGDVDSA 182
+A + +MP + N V ++ ++GD D A
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 212/346 (61%), Gaps = 2/346 (0%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
+ D N+++ Y + A ++F +M D +SW S+++G+ + G ++ A++ F+
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG 422
MP +NL +W+ +I GY KN ++ AI+LF M+ EG + + SV+S C L L G
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 423 KQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
++ ++ V K+ + +L + +L+ M+ RCG I +A VF + D ++W+++I G A
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP-ETDSLSWSSIIKGLAV 327
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
HG A A+ F QM L P +TF +VL+AC+H GLVE+G + +M D+GIEPR+E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 542 HFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISL 601
H+ VD+LGR G+L EA + I M VKP+ + GALLG+C+++ N E+A+ LI +
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 602 EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+PE SG YVLL N+YA WD E +R +M+EK VKK G+S ++
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 33/280 (11%)
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
L A F ++ NL +N LI + + A ++QM PD T ++
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 413 CTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF------ 465
+ + + +G+Q H Q+V D+ + NSL+ MY+ CG I A +F +M F
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 466 ------------------------YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
++++ TW+ MI GYA + A++LF+ MKR +
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
+SV+++CAH G +E G R + ++ + + + + VD+ R G +++A+
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISL 601
+ +P + D W +++ VHG+ A +ISL
Sbjct: 306 VFEGLP-ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 20/239 (8%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
E+SL+H + G ++ A F M R+ V+W ++++G+ K + AR++FD
Sbjct: 155 ENSLVHMYAN-------CGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 92 EMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNT----VISGYAKNGR 147
EMP R++ +W+++I+GY + E+ LF+ M V+ T VIS A G
Sbjct: 208 EMPHRNLFTWSIMINGY---AKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 148 MDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISG 203
++ + ++ + + N + A++ F GD++ A+ F+ +PE DS S S++I G
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
L +G A + D+ + +++ G VE+ +++ + D G
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFIPRDV--TFTAVLSACSHGGLVEKGLEIYENMKKDHG 381
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 121/279 (43%), Gaps = 49/279 (17%)
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
Q D+ N ++ Y +C F+ ++F +M RD VSW ++++GY K G ++ A ++
Sbjct: 149 QNDVYVENSLVHMYANC---GFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREM 205
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
FD MP RN + + +I G+ N + A+ F+ M G+V N + +
Sbjct: 206 FDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR----------EGVVANETVMV-- 253
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
++I+ G +E R ++ + N
Sbjct: 254 ---------------------SVISSCAHLGALEFGERAYEYVVKSH---------MTVN 283
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS 334
++ +++ + + GDI A +F+ + E D+ +W+++I G +A F +M S
Sbjct: 284 LILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMIS 343
Query: 335 ----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
P +++ +++S + G ++ + +E M + + I
Sbjct: 344 LGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGI 382
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 223/361 (61%), Gaps = 7/361 (1%)
Query: 296 ELFDSMGERDTCAWNTMISGYVQ-ISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
LF S ++ Y +S + A +LF EM + +SW +++SG+A+ GD+
Sbjct: 151 HLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVC 413
A FE MP++++ SWN+++A +N + A+ LF +M E +P+ T+ VLS C
Sbjct: 211 NAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSAC 270
Query: 414 TGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITW 472
L L K +H + + D+ ++NSL+ +Y +CG + EA +VF +M K + W
Sbjct: 271 AQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF-KMASKKSLTAW 329
Query: 473 NAMIGGYASHGLAVDALELFKQMKRLKIH---PTYITFISVLNACAHAGLVEEGRRQFNS 529
N+MI +A HG + +A+ +F++M +L I+ P +ITFI +LNAC H GLV +GR F+
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDL 389
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
M N +GIEPR+EH+ +D+LGR G+ EA++++++M +K D+A+WG+LL +C++HG+++
Sbjct: 390 MTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLD 449
Query: 590 LAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSS 649
LA+VA + L++L P + G ++ N+Y + W++A R R +++ +N K G+S ++
Sbjct: 450 LAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEID 509
Query: 650 N 650
N
Sbjct: 510 N 510
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 151/339 (44%), Gaps = 60/339 (17%)
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
R+LFDEM ER+ VSW ++SGYA++G + A+ LF+ MPER+ S NA++ NG
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 180 DSAVGFFKRM---PEC--DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY 234
AV F+RM P + ++ ++S + G L +A GI D V
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVS-- 298
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N+L+ YG+ G +EEA +F ++++ +WNSM+ C+ G A
Sbjct: 299 NSLVDLYGKCGNLEEASSVFKMAS-------------KKSLTAWNSMINCFALHGRSEEA 345
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
+F+ M + + I+D++ PD +++ +++ G +
Sbjct: 346 IAVFEEMMK-------------LNINDIK-----------PDHITFIGLLNACTHGGLVS 381
Query: 355 VAKDFFERMPQKNLIS-----WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
+ +F+ M + I + LI + + A+E+ S M++ K D S+
Sbjct: 382 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKM---KADEAIWGSL 438
Query: 410 LSVCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSLITM 446
L+ C G +DL ++ K ++ P N + M
Sbjct: 439 LNACKIHGHLDLA------EVAVKNLVALNPNNGGYVAM 471
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIA 84
FH +++LLH + +SH+ + AR FD M RN V+W ++SG+ + +I+
Sbjct: 157 FHLYVVVQTALLHSYASSVSHI------TLARQLFDEMSERNVVSWTAMLSGYARSGDIS 210
Query: 85 KARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWN-----TVI 139
A LF++MP+RD+ SWN I++ +C + E LF M + N V+
Sbjct: 211 NAVALFEDMPERDVPSWNAILA---ACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 140 SGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN-----GDVDSAVGFFKRMPECDS 194
S A+ G + Q K A R +SS+ ++ L++ G+++ A FK +
Sbjct: 268 SACAQTGTL-QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSL 326
Query: 195 ASLSALISGLVRNGELDMAAGILLECG--DGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
+ +++I+ +G + A + E + ++ K D + + L+ G V + R
Sbjct: 327 TAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHI-TFIGLLNACTHGGLVSKGRG 385
Query: 253 LFDRIPNDQG 262
FD + N G
Sbjct: 386 YFDLMTNRFG 395
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 193/660 (29%), Positives = 307/660 (46%), Gaps = 98/660 (14%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIA----------- 84
L N ++ ++ G +A FD M RN V++ TL G+ + I
Sbjct: 84 LFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHE 143
Query: 85 -------KARQLFDEMPQRDIVSW---NLIISGY-------------FSCCGSKFVEEGR 121
+LF + + +I W ++ GY +S CGS V+ R
Sbjct: 144 LNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS--VDSAR 201
Query: 122 KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG-DVD 180
+F+ + +D V W ++S Y +NG + +LKL M + GF+ N D
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR----------MAGFMPNNYTFD 251
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAG----ILLECGDGDEGKHDLVQAYNT 236
+A+ AS+ GL G D A G IL C D +
Sbjct: 252 TAL----------KASI-----GL---GAFDFAKGVHGQILKTCYVLDP------RVGVG 287
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
L+ Y Q G + +A ++F+ +P + +VV W+ M+ + + G A +
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMP-------------KNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 297 LFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP--------DALSWNSIISGFA 348
LF M E +S + + + S L +++ D N++I +A
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYA 394
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ + A F + KN +SWN++I GY+ + A +F + T SS
Sbjct: 395 KCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSS 454
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTV-IPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
L C L + LG Q+H L KT + ++NSLI MY++CG I A +VFNEM+
Sbjct: 455 ALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI- 513
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
DV +WNA+I GY++HGL AL + MK P +TF+ VL+ C++AGL+++G+ F
Sbjct: 514 DVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECF 573
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
SMI D+GIEP +EH+ V +LGR GQL +AM LI +P +P +W A+L + N
Sbjct: 574 ESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNN 633
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
E A+ +A+ ++ + P+ YVL+ NMYA + W + +R M+E VKK+ G SW++
Sbjct: 634 EEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 15/316 (4%)
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSM-GERDTCAWNTMISGYVQISDMEEASKL-- 328
RR ++ N + C V E DS+ D+ A+ M+ +Q +D A +
Sbjct: 14 RRLMIRCNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHC 73
Query: 329 --FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG 386
K+ D + N +++ + + G K A + F+ MP++N +S+ +L GY +
Sbjct: 74 DILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQD---- 129
Query: 387 AIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLIT 445
I L+S++ EG + + H +S L + L + +H + K + + +LI
Sbjct: 130 PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALIN 189
Query: 446 MYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI 505
YS CG++ A TVF E KD++ W ++ Y +G D+L+L M+ P
Sbjct: 190 AYSVCGSVDSARTVF-EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 506 TFISVLNACAHAGLVEEGRRQFNSMIND-YGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
TF + L A G + + ++ Y ++PRV + + + G + +A + N
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFN 306
Query: 565 SMPVKPDKAVWGALLG 580
MP K D W ++
Sbjct: 307 EMP-KNDVVPWSFMIA 321
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 277/540 (51%), Gaps = 46/540 (8%)
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMP--ERNAVSSNAVITGFLLNGDV--DSAVG 184
E + V +++ + Y ++ R+D A F+ +P +RN S N +++G+ + +
Sbjct: 36 EDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLL 95
Query: 185 FFKRMPE----CDSASLSALISGLVRNGELDMAAGILLECGDGDEG--KHDLVQAYNTLI 238
+ RM DS +L I V G L+ GIL+ G K D V +L+
Sbjct: 96 LYNRMRRHCDGVDSFNLVFAIKACVGLGLLE--NGILIHGLAMKNGLDKDDYVAP--SLV 151
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
Y Q G +E A+++FD IP RN V W +M Y+K LF
Sbjct: 152 EMYAQLGTMESAQKVFDEIP-------------VRNSVLWGVLMKGYLKYSKDPEVFRLF 198
Query: 299 DSMGERDT----------C---AWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIIS 345
M RDT C A + +G ++ + + SII
Sbjct: 199 CLM--RDTGLALDALTLICLVKACGNVFAG--KVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+ + L A+ FE +N++ W +LI+G+ K E A +LF QM E P++ T
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPIN-NSLITMYSRCGAIGEACTVFNEMK 464
L+++L C+ L L GK +H + + I +N S I MY+RCG I A TVF+ M
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 465 FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
++VI+W++MI + +GL +AL+ F +MK + P +TF+S+L+AC+H+G V+EG
Sbjct: 375 -ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 525 RQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRV 584
+QF SM DYG+ P EH+A VD+LGR G++ EA I++MPVKP + WGALL +CR+
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
Query: 585 HGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
H V+LA A+ L+S+EPE S YVLL N+YA+ +W+ VR M K +K G S
Sbjct: 494 HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 231/500 (46%), Gaps = 42/500 (8%)
Query: 47 IRTGRLSEARTFFDSMK--HRNTVTWNTLISGHVKRREI--AKARQLFDEMPQR--DIVS 100
I++ RL A + F+ + RN +WNT++SG+ K + + L++ M + + S
Sbjct: 50 IQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDS 109
Query: 101 WNLIISGYFSCCGSKFVE-----EGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
+NL+ + +C G +E G + + + + D V+ +++ YA+ G M+ A K+F
Sbjct: 110 FNLVFA-IKACVGLGLLENGILIHGLAMKNGLDKDDYVA-PSLVEMYAQLGTMESAQKVF 167
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
D +P RN+V ++ G+L F M + A L AL + ++ AG
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA-LDALTLICLVKACGNVFAG 226
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAG----YGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
+ +C G + + + L A Y + ++ AR+LF+ +
Sbjct: 227 KVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVD------------ 274
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASK 327
RNVV W +++ + K V A +LF M + C ++ + +
Sbjct: 275 -RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKS 333
Query: 328 LFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNED 383
+ M DA+++ S I +A+ G++++A+ F+ MP++N+ISW+S+I + N
Sbjct: 334 VHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGL 393
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINN 441
++ A++ F +M+ + P+ T S+LS C+ ++ G + + +T+ V+P+
Sbjct: 394 FEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYA 453
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
++ + R G IGEA + + M W A++ H A E+ +++ ++
Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPE 513
Query: 502 PTYITFISVLNACAHAGLVE 521
+ + ++ + N A AG+ E
Sbjct: 514 KSSV-YVLLSNIYADAGMWE 532
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 222/387 (57%), Gaps = 20/387 (5%)
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP 333
WN++M Y++ + A +++ M D + +I VQI D L KE+
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDF----TLGKELH 140
Query: 334 SP--------DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
S D + I+ + + G+ + A+ F+ P++ L SWN++I G +
Sbjct: 141 SVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRAN 200
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI---PDLPINNS 442
A+E+F M+ G +PD T+ SV + C GL DL L Q+H+ V + D+ + NS
Sbjct: 201 EAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNS 260
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
LI MY +CG + A +F EM+ ++V++W++MI GYA++G ++ALE F+QM+ + P
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
ITF+ VL+AC H GLVEEG+ F M +++ +EP + H+ VD+L R GQL+EA +
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 563 INSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELW 622
+ MP+KP+ VWG L+G C G+VE+A+ A ++ LEP + G YV+L N+YA +W
Sbjct: 380 VEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMW 439
Query: 623 DDAERVRVLMEEKNVKKQTGYSWVDSS 649
D ERVR LM+ K V K YS+ ++
Sbjct: 440 KDVERVRKLMKTKKVAKIPAYSYASTT 466
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 61/367 (16%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTV-----TWNTLISGHVKRREIAKARQLFDEM 93
WN + IR +A + M R+TV + +I V+ + ++L
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMV-RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 94 PQRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQAL 152
+ V SG+ + C + E RK+FDE PER SWN +I G GR ++A+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
++F M +R+ + + + S++A GL G+L +
Sbjct: 204 EMFVDM-KRSGLEPD-----------------------DFTMVSVTASCGGL---GDLSL 236
Query: 213 AAGILLEC--GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
A L +C E K D++ N+LI YG+ G+++ A +F+ +
Sbjct: 237 AFQ-LHKCVLQAKTEEKSDIMM-LNSLIDMYGKCGRMDLASHIFEEMR------------ 282
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE----RDTCAWNTMISGYVQISDMEEAS 326
+RNVVSW+SM++ Y G+ + A E F M E + + ++S V +EE
Sbjct: 283 -QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Query: 327 KLFKEMPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIAGYDK 380
F M S P + I+ ++ G LK AK E MP K N++ W L+ G +K
Sbjct: 342 TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
Query: 381 NEDYKGA 387
D + A
Sbjct: 402 FGDVEMA 408
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 133/309 (43%), Gaps = 44/309 (14%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
I+ + G AR FD R +WN +I G +A ++F +M + + +
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 103 LIISGYFSCCGS------KFVEEGRKLFDEMPER-DCVSWNTVISGYAKNGRMDQALKLF 155
+ + CG F L + E+ D + N++I Y K GRMD A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELD 211
+ M +RN VS +++I G+ NG+ A+ F++M E + + ++S V G ++
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 212 --------MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
M + LE G + Y ++ + G+++EA+++ + +P
Sbjct: 339 EGKTYFAMMKSEFELEPG---------LSHYGCIVDLLSRDGQLKEAKKVVEEMP----- 384
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDME 323
+ NV+ W +M K GD+ A + M E + WN + YV ++++
Sbjct: 385 -------MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELE--PWNDGV--YVVLANVY 433
Query: 324 EASKLFKEM 332
++K++
Sbjct: 434 ALRGMWKDV 442
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 27 KTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKA 86
+ E S + N I + GR+ A F+ M+ RN V+W+++I G+ +A
Sbjct: 246 QAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA 305
Query: 87 RQLFDEMPQRDIVSWNLIISGYFSCC-GSKFVEEGRKLFDEMP-----ERDCVSWNTVIS 140
+ F +M + + + G S C VEEG+ F M E + ++
Sbjct: 306 LECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVD 365
Query: 141 GYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG 177
+++G++ +A K+ + MP + N ++ G L+ G
Sbjct: 366 LLSRDGQLKEAKKVVEEMP----MKPNVMVWGCLMGG 398
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/584 (29%), Positives = 282/584 (48%), Gaps = 63/584 (10%)
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF------DAMPERNAVSS---- 166
+ R++FD MPE D V+WNT+++ Y++ G +A+ LF DA P+ + ++
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 167 -----------------------------NAVITGFLLNGDVDSAVGFFKRMPECDS--- 194
N++I + D SA F+ M CDS
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC-CDSRNE 138
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
+ +L+ + + + A + +E + A+N +I+G+ GK+E LF
Sbjct: 139 VTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAWNIMISGHAHCGKLESCLSLF 192
Query: 255 DRIPNDQGDGKEDGRRFRR--NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTM 312
+ + + K D F N S +S + Y ++ V + + S E A N++
Sbjct: 193 KEML--ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE----AKNSV 246
Query: 313 ISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWN 372
+S Y ++ ++A + + + +SWNSII +IG+ + A + F P+KN+++W
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 373 SLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT 432
++I GY +N D + A+ F +M G D +VL C+GL L GK +H +
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 433 VIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALEL 491
+ N+L+ +Y++CG I EA F ++ KD+++WN M+ + HGLA AL+L
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 492 FKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILG 551
+ M I P +TFI +L C+H+GLVEEG F SM+ DY I V+H +D+ G
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 552 RQGQLQEAMDLINS----MPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG 607
R G L EA DL + + + + W LLG+C H + EL + ++ L EP
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 608 PYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+VLL N+Y + W + E VR M E+ +KK G SW++ N+
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQ 589
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 40/298 (13%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
S I+ A+ G + A+ F+ MP+ + ++WN+++ Y + ++ AI LF+Q++ K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTV 459
PD ++ +++LS C L ++ G+++ LV ++ LP+NNSLI MY +C A V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 460 FNEM---------------------KF-----------YKDVITWNAMIGGYASHGLAVD 487
F +M +F + WN MI G+A G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 488 ALELFKQMKRLKIHPTYITFISVLNAC-AHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
L LFK+M + P TF S++NAC A + V GR M+ + G VE S
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSV 246
Query: 547 VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPE 604
+ + G +AM + S+ V + W +++ +C G E A + L PE
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLT-QVSWNSIIDACMKIGETE----KALEVFHLAPE 299
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 172/416 (41%), Gaps = 106/416 (25%)
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM-- 332
+V S + K G I SAR++FD M E DT AWNTM++ Y ++ +EA LF ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 333 --PSPDALSWNSIISGFAQIGDLKVAKD---------FFERMP----------------- 364
PD S+ +I+S A +G++K + F +P
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 365 -----------QKNLISWNSLIAGYDKNEDYKGAIELFSQM------------------- 394
+N ++W SL+ Y E ++ A+++F +M
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 395 -----------QLEGE-KPDRHTLSSVLSVCTG-LVDLYLGKQMHQLVTKTVIPD-LPIN 440
LE E KPD +T SS+++ C+ ++ G+ +H ++ K +
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 441 NSLITMYSRCG---------------------AIGEACTVFNEMK-----FY----KDVI 470
NS+++ Y++ G +I +AC E + F+ K+++
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
TW MI GY +G AL F +M + + + + +VL+AC+ L+ G+ +
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL 363
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
I+ G + + V++ + G ++EA + K D W +L + VHG
Sbjct: 364 IH-CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFAFGVHG 417
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 131/333 (39%), Gaps = 108/333 (32%)
Query: 52 LSEARTFFD-SMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFS 110
LS + F D RN VTW +L+ ++ + A +F EMP+R +WN++ISG+
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 111 CCGSKFVEEGRKLFDEMPER----DCVSW------------------------------- 135
C +E LF EM E DC ++
Sbjct: 182 C---GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSS 238
Query: 136 -----NTVISGYAKNGRMD-------------------------------QALKLFDAMP 159
N+V+S Y K G D +AL++F P
Sbjct: 239 AVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP 298
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALI---SGLVRNGELDM 212
E+N V+ +ITG+ NGD + A+ FF M + D + A++ SGL G M
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKM 358
Query: 213 AAGILLECGDGDEGKHDLVQAY----NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
G L+ CG Q Y N L+ Y + G ++EA R F I N
Sbjct: 359 IHGCLIHCG---------FQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN--------- 400
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
+++VSWN+M+ + G A +L+D+M
Sbjct: 401 ----KDLVSWNTMLFAFGVHGLADQALKLYDNM 429
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 231/421 (54%), Gaps = 42/421 (9%)
Query: 268 GRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
GR ++N +S N ++ YV+ GD+V+AR++FD M +R WN MI+G +Q EE
Sbjct: 18 GRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLS 77
Query: 328 LFKEMP----SPDALSWNSIISGFAQI--------------------------------- 350
LF+EM SPD + S+ SG A +
Sbjct: 78 LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYM 137
Query: 351 --GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
G L+ + MP +NL++WN+LI G +N + + L+ M++ G +P++ T +
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
VLS C+ L G+Q+H K + + +SLI+MYS+CG +G+A F+E + +
Sbjct: 198 VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DE 256
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQM-KRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
D + W++MI Y HG +A+ELF M ++ + + F+++L AC+H+GL ++G
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLEL 316
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
F+ M+ YG +P ++H+ VD+LGR G L +A +I SMP+K D +W LL +C +H
Sbjct: 317 FDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHK 376
Query: 587 NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
N E+AQ + ++ ++P S YVLL N++A+ + W D VR M +KNVKK+ G SW
Sbjct: 377 NAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWF 436
Query: 647 D 647
+
Sbjct: 437 E 437
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 141/275 (51%), Gaps = 4/275 (1%)
Query: 313 ISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWN 372
+S Y ++ D A ++ M + +S N +I+G+ + GDL A+ F+ MP + L +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 373 SLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT 432
++IAG + E + + LF +M G PD +TL SV S GL + +G+Q+H K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 433 VIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALEL 491
+ DL +N+SL MY R G + + V M ++++ WN +I G A +G L L
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 492 FKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILG 551
+K MK P ITF++VL++C+ + +G +Q ++ G V +S + +
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQG-QQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 552 RQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+ G L +A + D+ +W +++ + HG
Sbjct: 239 KCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHG 272
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 168/415 (40%), Gaps = 100/415 (24%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G A + M+ +N ++ N LI+G+V+ ++ AR++FDEMP R + +WN +I+G
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 108 YFSCCGSKFVEEGRKLFDEMP--------------------------------------- 128
+F EEG LF EM
Sbjct: 66 LIQ---FEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
E D V +++ Y +NG++ + +MP RN V+ N +I G NG ++ + +K
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 189 MPECDSASLSALISGLVRNGELDMAAGILLECGD-GDEGKHDLVQA-------------Y 234
M ISG R ++ +L C D G+ + A
Sbjct: 183 MK----------ISG-CRPNKITFVT-VLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVV 230
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
++LI+ Y + G + +A + F +ED + V W+SM+ Y G A
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSE--------RED-----EDEVMWSSMISAYGFHGQGDEA 277
Query: 295 RELFDSMGERD--------------TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSW 340
ELF++M E+ C+ + + +++ DM FK P +
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK----PGLKHY 333
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIAGYDKNEDYKGAIELFSQM 394
++ + G L A+ MP K +++ W +L++ + +++ + A +F ++
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 244/466 (52%), Gaps = 52/466 (11%)
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
H L ++LIA +E R L ++ +R + + ++ CY++
Sbjct: 28 HSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVS--------YRHGFIG-DQLVGCYLR 78
Query: 288 VGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP------SPDALSWN 341
+G V A +LFD M ERD +WN++ISGY + + ++ M P+ +++
Sbjct: 79 LGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL 138
Query: 342 SIISG-----------------------------------FAQIGDLKVAKDFFERMPQK 366
S+IS + + GDL + FE + K
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
NL+SWN++I + +N + + F+ + G +PD+ T +VL C + + L + +H
Sbjct: 199 NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH 258
Query: 427 QLVT-KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
L+ + I +L+ +YS+ G + ++ TVF+E+ D + W AM+ YA+HG
Sbjct: 259 GLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHGFG 317
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
DA++ F+ M I P ++TF +LNAC+H+GLVEEG+ F +M Y I+PR++H++
Sbjct: 318 RDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC 377
Query: 546 FVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPES 605
VD+LGR G LQ+A LI MP++P VWGALLG+CRV+ + +L AA+ L LEP
Sbjct: 378 MVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRD 437
Query: 606 SGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
YV+L N+Y+ LW DA R+R LM++K + + +G S+++ N+
Sbjct: 438 GRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNK 483
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 167/373 (44%), Gaps = 62/373 (16%)
Query: 122 KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
KLFDEMPERD VSWN++ISGY+ G + + ++ M + S
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRM--------------------MIS 126
Query: 182 AVGFFKRMPECDSASLSALISGLVRNG---ELDMAAGILLECGDGDEGKHDLVQAYNTLI 238
VGF + + ++IS V G E G++++ G +E V+ N I
Sbjct: 127 EVGF-----RPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE-----VKVVNAFI 176
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
YG++G + + +LF+ + +N+VSWN+M++ +++ G F
Sbjct: 177 NWYGKTGDLTSSCKLFEDLSI-------------KNLVSWNTMIVIHLQNGLAEKGLAYF 223
Query: 299 D---SMG-ERDTCAWNTMIS-----GYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQ 349
+ +G E D + ++ G V+++ +F ++ +++ +++
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT-TALLDLYSK 282
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
+G L+ + F + + ++W +++A Y + + AI+ F M G PD T + +
Sbjct: 283 LGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHL 342
Query: 410 LSVC--TGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
L+ C +GLV+ GK + ++K + P L + ++ + R G + +A + EM
Sbjct: 343 LNACSHSGLVE--EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPM 400
Query: 466 YKDVITWNAMIGG 478
W A++G
Sbjct: 401 EPSSGVWGALLGA 413
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 193/507 (38%), Gaps = 110/507 (21%)
Query: 18 CSRGLASFHKTNDNESSLLHQWNKKISHLI---------RTGRLSEARTFFDSMKHRNTV 68
CS+ + + ++SS +H + +S LI RL + S+ +R+
Sbjct: 9 CSKFRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVV-KSVSYRHGF 67
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY-------------------- 108
+ L+ +++ A +LFDEMP+RD+VSWN +ISGY
Sbjct: 68 IGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISE 127
Query: 109 -------------FSCC---GSKFVEEGRKL------FDEMPERDCVSWNTVISGYAKNG 146
S C GSK EEGR + F + E V N I+ Y K G
Sbjct: 128 VGFRPNEVTFLSMISACVYGGSK--EEGRCIHGLVMKFGVLEEVKVV--NAFINWYGKTG 183
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
+ + KLF+ + +N VS N +I L NG + + +F A ++R
Sbjct: 184 DLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLR 243
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+ E D G L Q + LI G SG
Sbjct: 244 SCE--------------DMGVVRLAQGIHGLIMFGGFSG--------------------- 268
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
N +++ Y K+G + + +F + D+ AW M++ Y +A
Sbjct: 269 -------NKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 327 KLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI-----SWNSLIAG 377
K F+ M SPD +++ +++ + G ++ K +FE M ++ I ++ ++
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Query: 378 YDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDL 437
++ + A L +M +E P ++L C D LG + + + + D
Sbjct: 382 LGRSGLLQDAYGLIKEMPME---PSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMK 464
L +YS G +A + N MK
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMK 465
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 189/636 (29%), Positives = 298/636 (46%), Gaps = 117/636 (18%)
Query: 112 CGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVIT 171
C + + R+LFD MPER+ +S+N++ISGY + G +QA++LF A +N +
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF-----LEAREANLKLD 147
Query: 172 GFLLNGDVDSAVGFFKRMPECDSASLSALISGLV--------------------RNGELD 211
F G A+GF + D L L+ GLV + G+LD
Sbjct: 148 KFTYAG----ALGFCGERCDLD---LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLD 200
Query: 212 MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD-------- 263
A + C + D+ ++N+LI+GY + G EE L ++ D +
Sbjct: 201 QAMSLFDRCDERDQ------VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGS 254
Query: 264 -----------------------GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
+ G F ++V +++ Y K G + A +LF
Sbjct: 255 VLKACCINLNEGFIEKGMAIHCYTAKLGMEF--DIVVRTALLDMYAKNGSLKEAIKLFSL 312
Query: 301 MGERDTCAWNTMISGYVQISDM-----EEASKLFKEM------PSPDALS---------- 339
M ++ +N MISG++Q+ ++ EA KLF +M PSP S
Sbjct: 313 MPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK 372
Query: 340 -----------------------WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIA 376
+++I +A +G + F ++++ SW S+I
Sbjct: 373 TLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMID 432
Query: 377 GYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD 436
+ +NE + A +LF Q+ +P+ +T+S ++S C L G+Q+ K+ I
Sbjct: 433 CHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDA 492
Query: 437 LP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
+ S I+MY++ G + A VF E++ DV T++AMI A HG A +AL +F+ M
Sbjct: 493 FTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESM 551
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
K I P F+ VL AC H GLV +G + F M NDY I P +HF VD+LGR G+
Sbjct: 552 KTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGR 611
Query: 556 LQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNM 615
L +A +LI S + W ALL SCRV+ + + + A+ L+ LEPE+SG YVLL+N+
Sbjct: 612 LSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNI 671
Query: 616 YANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
Y + + AE VR LM ++ VKK+ SW+ N+
Sbjct: 672 YNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQ 707
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 209/312 (66%), Gaps = 4/312 (1%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
+S++ + G+++ A FE MP++N++SW ++I+G+ + ++L+S+M+
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTV 459
P+ +T +++LS CTG L G+ +H Q + + L I+NSLI+MY +CG + +A +
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFK-QMKRLKIHPTYITFISVLNACAHAG 518
F++ KDV++WN+MI GYA HGLA+ A+ELF+ M + P IT++ VL++C HAG
Sbjct: 279 FDQFS-NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
LV+EGR+ FN ++ ++G++P + H++ VD+LGR G LQEA++LI +MP+KP+ +WG+L
Sbjct: 338 LVKEGRKFFN-LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 579 LGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
L SCRVHG+V AA+ + LEP+ + +V L N+YA++ W +A VR LM++K +K
Sbjct: 397 LFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLK 456
Query: 639 KQTGYSWVDSSN 650
G SW++ +N
Sbjct: 457 TNPGCSWIEINN 468
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 29/254 (11%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS- 194
++++ Y +G ++ A K+F+ MPERN VS A+I+GF VD + + +M + S
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 195 ---ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEAR 251
+ +AL+S +G L G + C G + N+LI+ Y + G +++A
Sbjct: 219 PNDYTFTALLSACTGSGAL--GQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 252 RLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-----DT 306
R+FD+ N ++VVSWNSM+ Y + G + A ELF+ M + D
Sbjct: 277 RIFDQFSN-------------KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDA 323
Query: 307 CAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFER 362
+ ++S ++E K F M P+ ++ ++ + G L+ A + E
Sbjct: 324 ITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIEN 383
Query: 363 MPQK-NLISWNSLI 375
MP K N + W SL+
Sbjct: 384 MPMKPNSVIWGSLL 397
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 48/297 (16%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFK 330
F +V +S+++ Y G++ +A ++F+ M ER+ +W MISG+ Q ++ KL+
Sbjct: 151 FISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 331 EM----PSPDALSW-----------------------------------NSIISGFAQIG 351
+M P+ ++ NS+IS + + G
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS-QMQLEGEKPDRHTLSSVL 410
DLK A F++ K+++SWNS+IAGY ++ AIELF M G KPD T VL
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 411 SVC--TGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
S C GLV G++ L+ + + P+L + L+ + R G + EA + M
Sbjct: 331 SSCRHAGLVK--EGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP 388
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP-TYITFISVLNACAHAGLVEEG 523
+ + W +++ HG + ++ RL + P T + + N A G +E
Sbjct: 389 NSVIWGSLLFSCRVHGDVWTGIRAAEE--RLMLEPDCAATHVQLANLYASVGYWKEA 443
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 37/302 (12%)
Query: 49 TGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY 108
+G + A F+ M RN V+W +ISG + + +L+ +M + + +
Sbjct: 168 SGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTAL 227
Query: 109 FSCC-GSKFVEEGRKLFDEMPERDCVSW----NTVISGYAKNGRMDQALKLFDAMPERNA 163
S C GS + +GR + + S+ N++IS Y K G + A ++FD ++
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 164 VSSNAVITGFLLNGDVDSAVGFFK-RMPEC----DSASLSALIS-----GLVRNGELDMA 213
VS N++I G+ +G A+ F+ MP+ D+ + ++S GLV+ G
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF- 346
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
++ E G E H Y+ L+ G+ G ++EA L + +P +
Sbjct: 347 -NLMAEHGLKPELNH-----YSCLVDLLGRFGLLQEALELIENMP------------MKP 388
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDS--MGERDTCAWNTMISG-YVQISDMEEASKLFK 330
N V W S++ GD+ + + M E D A + ++ Y + +EA+ + K
Sbjct: 389 NSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRK 448
Query: 331 EM 332
M
Sbjct: 449 LM 450
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 21/164 (12%)
Query: 34 SLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM 93
S LH N IS + G L +A FD +++ V+WN++I+G+ + +A +LF+ M
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 94 -----PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAK 144
+ D +++ ++S SC + V+EGRK F+ M E + ++ ++ +
Sbjct: 314 MPKSGTKPDAITYLGVLS---SCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGR 370
Query: 145 NGRMDQALKLFDAMPERNAVSSNAVITGFLL-----NGDVDSAV 183
G + +AL+L + MP + N+VI G LL +GDV + +
Sbjct: 371 FGLLQEALELIENMP----MKPNSVIWGSLLFSCRVHGDVWTGI 410
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 240/420 (57%), Gaps = 13/420 (3%)
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
+NT+I G+ +S E A +F D + +++ S+ Y ++G
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFI-------DMLCSSPSVKPQRLTYPSVFKAYGRLGQAR 143
Query: 293 SARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFA 348
R+L + E D+ NTM+ YV + EA ++F M D ++WNS+I GFA
Sbjct: 144 DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFA 203
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ G + A++ F+ MPQ+N +SWNS+I+G+ +N +K A+++F +MQ + KPD T+ S
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
+L+ C L G+ +H+ + + + + +LI MY +CG I E VF E K
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-ECAPKK 322
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
+ WN+MI G A++G A++LF +++R + P ++FI VL ACAH+G V F
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
M Y IEP ++H+ V++LG G L+EA LI +MPV+ D +W +LL +CR GN
Sbjct: 383 RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGN 442
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
VE+A+ AA+ L L+P+ + YVLL N YA+ L+++A R+LM+E+ ++K+ G S ++
Sbjct: 443 VEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 210/499 (42%), Gaps = 62/499 (12%)
Query: 1 MSTCLMRLSRLQLPRTLCSRGLA--SFHKTNDNESSLLHQWNKKISHLIRTGRLSEART- 57
MS ++ S + +P S L+ ++ + D + S + + + + LI+TG +S+ T
Sbjct: 1 MSPTILSFSGVTVPAMPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTA 60
Query: 58 -------------------FFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM----- 93
F + H+N WNT+I G + A +F +M
Sbjct: 61 SRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSP 120
Query: 94 ---PQRDIVSWNLIISGYFSCCGSKFVEEGRKL----FDEMPERDCVSWNTVISGYAKNG 146
PQR +++ + Y ++ +GR+L E E D NT++ Y G
Sbjct: 121 SVKPQR--LTYPSVFKAYGRLGQAR---DGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCG 175
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
+ +A ++F M + V+ N++I GF G +D A F MP+ + S +++ISG VR
Sbjct: 176 CLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVR 235
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
NG A + E + D +L+ G E+ R + + I +
Sbjct: 236 NGRFKDALDMFREMQEKDVKPDGFTMV--SLLNACAYLGASEQGRWIHEYIVRN------ 287
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
RF N + +++ Y K G I +F+ ++ WN+MI G E A
Sbjct: 288 ---RFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAM 344
Query: 327 KLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
LF E+ PD++S+ +++ A G++ A +FF M +K +I + I Y
Sbjct: 345 DLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPS--IKHYTLMV 402
Query: 383 DYKGAIELFSQMQ-LEGEKP---DRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP 438
+ G L + + L P D SS+LS C + ++ + K+ + + K + PD
Sbjct: 403 NVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCL-KKLDPDET 461
Query: 439 INNSLIT-MYSRCGAIGEA 456
L++ Y+ G EA
Sbjct: 462 CGYVLLSNAYASYGLFEEA 480
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 247/437 (56%), Gaps = 13/437 (2%)
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
LD A IL D + + A N++I + +S E++ + RI + D K D
Sbjct: 56 LDYANQIL------DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNY 109
Query: 270 RFRRNVVSWNSMMMCYVKVG-DIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
V + + M + ++ R FD+ D +IS Y ++ ++ K+
Sbjct: 110 TVNFLVQACTGLRMRETGLQVHGMTIRRGFDN----DPHVQTGLISLYAELGCLDSCHKV 165
Query: 329 FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAI 388
F +P PD + ++++ A+ GD+ A+ FE MP+++ I+WN++I+GY + + + A+
Sbjct: 166 FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREAL 225
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMY 447
+F MQLEG K + + SVLS CT L L G+ H + + I + + +L+ +Y
Sbjct: 226 NVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLY 285
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
++CG + +A VF M+ K+V TW++ + G A +G LELF MK+ + P +TF
Sbjct: 286 AKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTF 344
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
+SVL C+ G V+EG+R F+SM N++GIEP++EH+ VD+ R G+L++A+ +I MP
Sbjct: 345 VSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP 404
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAER 627
+KP AVW +LL + R++ N+EL +A++ ++ LE + G YVLL N+YA+ WD+
Sbjct: 405 MKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSH 464
Query: 628 VRVLMEEKNVKKQTGYS 644
VR M+ K V+KQ G S
Sbjct: 465 VRQSMKSKGVRKQPGCS 481
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 174/394 (44%), Gaps = 43/394 (10%)
Query: 56 RTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSK 115
R FD+ H T LIS + + + ++F+ +P D V +++ C
Sbjct: 136 RRGFDNDPHVQT----GLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVIT 171
F RKLF+ MPERD ++WN +ISGYA+ G +AL +F M + N V+ +V++
Sbjct: 192 F---ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 172 GFLLNGDVDS---AVGFFKRMPECDSASL-SALISGLVRNGELDMAAGILLECGDGDEGK 227
G +D A + +R + L + L+ + G+++ A + G E K
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFW----GMEEK 304
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
+ V +++ + G +G E+ LF + K+DG N V++ S++
Sbjct: 305 N--VYTWSSALNGLAMNGFGEKCLELFSLM-------KQDG--VTPNAVTFVSVLRGCSV 353
Query: 288 VGDIVSARELFDSMG-----ERDTCAWNTMISGYVQISDMEEASKLFKEMP-SPDALSWN 341
VG + + FDSM E + ++ Y + +E+A + ++MP P A W+
Sbjct: 354 VGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWS 413
Query: 342 SIISGFAQIGDLKV----AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
S++ +L++ +K E + N ++ L Y + D+ + M+ +
Sbjct: 414 SLLHASRMYKNLELGVLASKKMLE-LETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSK 472
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK 431
G + + SV+ V + + ++G + H T+
Sbjct: 473 GVR--KQPGCSVMEVNGEVHEFFVGDKSHPKYTQ 504
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 53/294 (18%)
Query: 6 MRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHR 65
MR + LQ+ RG DN+ H IS G L F+S+
Sbjct: 123 MRETGLQVHGMTIRRGF-------DNDP---HVQTGLISLYAELGCLDSCHKVFNSIPCP 172
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF---------------- 109
+ V +++ + ++ AR+LF+ MP+RD ++WN +ISGY
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 110 ----------------SCCGSKFVEEGRKLFDEMPERDCVSW-----NTVISGYAKNGRM 148
+C +++GR + ER+ + T++ YAK G M
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI-ERNKIKITVRLATTLVDLYAKCGDM 291
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGL 204
++A+++F M E+N + ++ + G +NG + + F M + ++ + +++ G
Sbjct: 292 EKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGC 351
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
G +D + + G ++ Y L+ Y ++G++E+A + ++P
Sbjct: 352 SVVGFVDEGQR-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMP 404
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 276/574 (48%), Gaps = 122/574 (21%)
Query: 123 LFDEMPER-DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
LF+ ++ D SWN+VI+ A++G +AL F +M + + + +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS------------- 77
Query: 182 AVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGY 241
F + C +SL + SG + A + G + + LI Y
Sbjct: 78 --SFPCAIKAC--SSLFDIFSG----KQTHQQAFVF--------GYQSDIFVSSALIVMY 121
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF--- 298
GK+E+AR++FD IP +RN+VSW SM+ Y G+ + A LF
Sbjct: 122 STCGKLEDARKVFDEIP-------------KRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 299 -------------DSMG-----------------------------ERDTCAWNTMISGY 316
DSMG +R NT++ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 317 VQISD--MEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
+ + + A K+F ++ D +S+NSI+S +AQ G A + F R+ + ++++N++
Sbjct: 229 AKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTV 433
TLS+VL + L +GK +H Q++ +
Sbjct: 289 ------------------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318
Query: 434 IPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFK 493
D+ + S+I MY +CG + A F+ MK K+V +W AMI GY HG A ALELF
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 494 QMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQ 553
M + P YITF+SVL AC+HAGL EG R FN+M +G+EP +EH+ VD+LGR
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 554 GQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLY 613
G LQ+A DLI M +KPD +W +LL +CR+H NVELA+++ L L+ + G Y+LL
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 614 NMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
++YA+ W D ERVR++M+ + + K G+S ++
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 204/470 (43%), Gaps = 70/470 (14%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEM- 93
WN I+ L R+G +EA F SM+ + ++ I +I +Q +
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 94 ---PQRDI-VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMD 149
Q DI VS LI+ +S CG +E+ RK+FDE+P+R+ VSW ++I GY NG
Sbjct: 104 VFGYQSDIFVSSALIV--MYSTCGK--LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 150 QALKLF-DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR-- 206
A+ LF D + + N D D A+ DS L ++IS R
Sbjct: 160 DAVSLFKDLLVDEN---------------DDDDAMFL-------DSMGLVSVISACSRVP 197
Query: 207 -NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGY--GQSGKVEEARRLFDRIPNDQGD 263
G + +++ G D G V NTL+ Y G G V AR++FD+I +
Sbjct: 198 AKGLTESIHSFVIKRG-FDRG----VSVGNTLLDAYAKGGEGGVAVARKIFDQIVD---- 248
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDME 323
++ VS+NS+M Y + G A E+F + + +N + V ++
Sbjct: 249 ---------KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSH 299
Query: 324 EAS---------KLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
+ ++ + D + SII + + G ++ A+ F+RM KN+ SW ++
Sbjct: 300 SGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM 359
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-- 432
IAGY + A+ELF M G +P+ T SVL+ C+ G + +
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
V P L ++ + R G + +A + MK D I W++++ H
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 458 TVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHA 517
T+FN DV +WN++I A G + +AL F M++L ++PT +F + AC+
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 518 GLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGA 577
+ G +Q + +G + + ++ + + G+L++A + + +P K + W +
Sbjct: 90 FDIFSG-KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KRNIVSWTS 147
Query: 578 LLGSCRVHGN 587
++ ++GN
Sbjct: 148 MIRGYDLNGN 157
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 232/416 (55%), Gaps = 45/416 (10%)
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM 332
R+V +S++M Y K G + AR+LFD + ERDT +WN+MISGY + ++A LF++M
Sbjct: 165 RDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM 224
Query: 333 PS----PDALSWNS-----------------------------------IISGFAQIGDL 353
PD + S +IS + + GDL
Sbjct: 225 EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDL 284
Query: 354 KVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
A+ F +M +K+ ++W ++I Y +N A +LF +M+ G PD TLS+VLS C
Sbjct: 285 DSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 344
Query: 414 TGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITW 472
+ L LGKQ+ ++ + ++ + L+ MY +CG + EA VF M K+ TW
Sbjct: 345 GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPV-KNEATW 403
Query: 473 NAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIN 532
NAMI YA G A +AL LF R+ + P+ ITFI VL+AC HAGLV +G R F+ M +
Sbjct: 404 NAMITAYAHQGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS 460
Query: 533 DYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQ 592
+G+ P++EH+ + +D+L R G L EA + + P KPD+ + A+LG+C +V + +
Sbjct: 461 MFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIRE 520
Query: 593 VAAQALISL-EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
A + L+ + E +++G YV+ N+ A++++WD++ ++R LM ++ V K G SW++
Sbjct: 521 KAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 205/467 (43%), Gaps = 73/467 (15%)
Query: 66 NTVTWNTLISGHVKRREIAKARQ----LFDEMPQRDI-VSWNLIISGYFSCCGSKFVEEG 120
+ T+N + K EI R LF +RD+ ++ +LI+ ++ CG V
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM--MYAKCGQ--VGYA 186
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
RKLFDE+ ERD VSWN++ISGY++ G A+ LF M E GF
Sbjct: 187 RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEE----------GF------- 229
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY--NTLI 238
E D +L +++ G D+ G LLE + K + + + LI
Sbjct: 230 ----------EPDERTLVSMLGACSHLG--DLRTGRLLE--EMAITKKIGLSTFLGSKLI 275
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
+ YG+ G ++ ARR+F+++ +++ V+W +M+ Y + G A +LF
Sbjct: 276 SMYGKCGDLDSARRVFNQM-------------IKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 299 DSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWN-----SIISGFAQ 349
M + D +T++S + + E K + S +L N ++ + +
Sbjct: 323 FEMEKTGVSPDAGTLSTVLSACGSVGAL-ELGKQIETHASELSLQHNIYVATGLVDMYGK 381
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
G ++ A FE MP KN +WN++I Y K A+ LF +M + P T V
Sbjct: 382 CGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSV---PPSDITFIGV 438
Query: 410 LSVCTGLVDLYLG-KQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
LS C ++ G + H++ + ++P + ++I + SR G + EA
Sbjct: 439 LSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKP 498
Query: 468 DVITWNAMIGG-YASHGLAV--DALELFKQMKRLKIHPTYITFISVL 511
D I A++G + +A+ A+ + +MK K Y+ +VL
Sbjct: 499 DEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL 545
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 32/335 (9%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI-VSWNLIIS 106
+ G++ AR FD + R+TV+WN++ISG+ + A LF +M + ++S
Sbjct: 179 KCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVS 238
Query: 107 GYFSCCGSKFVEEGRKLFDEMPERDCVSWNT-----VISGYAKNGRMDQALKLFDAMPER 161
+C + GR L +EM + +T +IS Y K G +D A ++F+ M ++
Sbjct: 239 MLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKK 297
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGIL 217
+ V+ A+IT + NG A F M + D+ +LS ++S G L++ I
Sbjct: 298 DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIE 357
Query: 218 LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
+ +H++ A L+ YG+ G+VEEA R+F+ +P +N +
Sbjct: 358 THASELSL-QHNIYVA-TGLVDMYGKCGRVEEALRVFEAMPV-------------KNEAT 402
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGERDT-CAWNTMISGYVQISDMEEASKLFKEMPS-- 334
WN+M+ Y G A LFD M + + ++S V + + + F EM S
Sbjct: 403 WNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMF 462
Query: 335 ---PDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
P + +II ++ G L A +F ER P K
Sbjct: 463 GLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
+K IS + G L AR F+ M ++ V W +I+ + + + ++A +LF EM + +
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 100 SWNLIISGYFSCCGS-KFVEEGRKLFDEMPERDCVSWNTVISG----YAKNGRMDQALKL 154
+S S CGS +E G+++ E V +G Y K GR+++AL++
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM--PECD---SASLSALI-SGLVRNG 208
F+AMP +N + NA+IT + G A+ F RM P D LSA + +GLV G
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQG 451
Query: 209 -----ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
E+ G++ + ++ Y +I ++G ++EA +R P
Sbjct: 452 CRYFHEMSSMFGLVPK-----------IEHYTNIIDLLSRAGMLDEAWEFMERFP 495
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 242/426 (56%), Gaps = 35/426 (8%)
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
L+ YG+ +E+AR++ D +P +NVVSW +M+ Y + G A
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPE-------------KNVVSWTAMISRYSQTGHSSEALT 139
Query: 297 LFDSM----GERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWN---------SI 343
+F M G+ + + T+++ ++ S + ++ + + WN S+
Sbjct: 140 VFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI-----VKWNYDSHIFVGSSL 194
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
+ +A+ G +K A++ FE +P+++++S ++IAGY + + A+E+F ++ EG P+
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 404 HTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPI-NNSLITMYSRCGAIGEACTVFNE 462
T +S+L+ +GL L GKQ H V + +P + NSLI MYS+CG + A +F+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHPTYITFISVLNACAHAGLVE 521
M + I+WNAM+ GY+ HGL + LELF+ M+ K + P +T ++VL+ C+H + +
Sbjct: 315 MP-ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMED 373
Query: 522 EGRRQFNSMI-NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
G F+ M+ +YG +P EH+ VD+LGR G++ EA + I MP KP V G+LLG
Sbjct: 374 TGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLG 433
Query: 581 SCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQ 640
+CRVH +V++ + + LI +EPE++G YV+L N+YA+ W D VR +M +K V K+
Sbjct: 434 ACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKE 493
Query: 641 TGYSWV 646
G SW+
Sbjct: 494 PGRSWI 499
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 176/432 (40%), Gaps = 84/432 (19%)
Query: 43 ISHLIRTGRLSEARTFFDSM-KHRNTVTWNTLISGHVKRREIAKARQLFDEM------PQ 95
IS L GRL EA + ++ L++ + +R + +++ M P
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 96 RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF 155
+ + LI G C +E+ RK+ DEMPE++ VSW +IS Y++ G +AL +F
Sbjct: 87 TYLRTRLLIFYGKCDC-----LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP------ECDSASL--SALISGLVRN 207
M + + L + S +G K++ DS S+L+ +
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA 201
Query: 208 GELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI------PN-- 259
G++ A I EC + D+V +IAGY Q G EEA +F R+ PN
Sbjct: 202 GQIKEAREI-FECLP----ERDVVSC-TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYV 255
Query: 260 ---------------DQGDGKEDGRRFRRNV----VSWNSMMMCYVKVGDIVSARELFDS 300
D G + RR + V NS++ Y K G++ AR LFD+
Sbjct: 256 TYASLLTALSGLALLDHGK-QAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 301 MGERDTCAWNTMISGYVQISDMEEASKLFKEM-----PSPDALSWNSIISGFAQIGDLKV 355
M ER +WN M+ GY + E +LF+ M PDA++ +++SG +
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH------ 368
Query: 356 AKDFFERMPQKNLISWNSLIA---GYDKNEDYKGAI-----------ELFSQMQLEGEKP 401
RM L ++ ++A G ++ G I E F ++ KP
Sbjct: 369 -----GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKP 423
Query: 402 DRHTLSSVLSVC 413
L S+L C
Sbjct: 424 TAGVLGSLLGAC 435
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 11/244 (4%)
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMY 447
E +M + G + H ++L+ C L G+++H + KT +P + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
+C + +A V +EM K+V++W AMI Y+ G + +AL +F +M R P TF
Sbjct: 98 GKCDCLEDARKVLDEMP-EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
+VL +C A + G +Q + +I + + + +S +D+ + GQ++EA ++ +P
Sbjct: 157 ATVLTSCIRASGLGLG-KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGP----YVLLYNMYANLELWD 623
+ + + G + + L + A + L E P Y L + L L D
Sbjct: 216 ERDVVSCTAIIAG----YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 624 DAER 627
++
Sbjct: 272 HGKQ 275
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 120/306 (39%), Gaps = 80/306 (26%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMK------------------------------HRNTV 68
W IS +TG SEA T F M H V
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 69 TWN---------TLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY----------- 108
WN +L+ + K +I +AR++F+ +P+RD+VS II+GY
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 109 ---------------------FSCCGSKFVEEGRKLFDEMPERD----CVSWNTVISGYA 143
+ G ++ G++ + R+ V N++I Y+
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE-----CDSASLS 198
K G + A +LFD MPER A+S NA++ G+ +G + F+ M + D+ +L
Sbjct: 301 KCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 360
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
A++SG D I G+ G + Y ++ G++G+++EA R+P
Sbjct: 361 AVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Query: 259 NDQGDG 264
+ G
Sbjct: 421 SKPTAG 426
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 94/256 (36%), Gaps = 93/256 (36%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD- 91
SSLL + K G++ EAR F+ + R+ V+ +I+G+ + +A ++F
Sbjct: 192 SSLLDMYAK-------AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 92 ---------------------------------------EMPQRDIVSWNLIISGYFSCC 112
E+P ++ +LI +S C
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLI--DMYSKC 302
Query: 113 GSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITG 172
G+ + R+LFD MPER +SWN ++ GY+K+G + L+LF M + V +AV
Sbjct: 303 GN--LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 360
Query: 173 FLLNG------------------------------------------DVDSAVGFFKRMP 190
+L+G +D A F KRMP
Sbjct: 361 AVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMP 420
Query: 191 ECDSASLSALISGLVR 206
+A + + G R
Sbjct: 421 SKPTAGVLGSLLGACR 436
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKR---REIAKARQLF--DEMP 94
N I + G LS AR FD+M R ++WN ++ G+ K RE+ + +L ++
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM------PERDCVSWNTVISGYAKNGRM 148
+ D V+ ++SG C + + G +FD M + + ++ + GR+
Sbjct: 353 KPDAVTLLAVLSG---CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRI 409
Query: 149 DQALKLFDAMPERNAVSSNAVITGFL---LNGDVDSAVG 184
D+A + MP + + G L+ D+ +VG
Sbjct: 410 DEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVG 448
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 177/544 (32%), Positives = 277/544 (50%), Gaps = 57/544 (10%)
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
V+ RKLFD + +RD VSW +IS +++ G AL LF M R V +N G +L
Sbjct: 63 VKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM-HREDVKANQFTYGSVLK 121
Query: 177 GDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT 236
D +G K + I G V G AG L+ +
Sbjct: 122 SCKD--LGCLKEGMQ---------IHGSVEKGN---CAGNLI--------------VRSA 153
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
L++ Y + GK+EEAR FD + R++VSWN+M+ Y ++
Sbjct: 154 LLSLYARCGKMEEARLQFDSMK-------------ERDLVSWNAMIDGYTANACADTSFS 200
Query: 297 LFDSM---GERDTC-AWNTMISGYVQISDMEEASKL----FKEMPSPDALSWNSIISGFA 348
LF M G++ C + +++ + + +E S+L K + S+++ +
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYD-KNEDYKGAIELFSQMQLEGEKPDRHTLS 407
+ G L A E +++L+S +LI G+ +N A ++F M K D +S
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 408 SVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
S+L +CT + + +G+Q+H K+ + D+ + NSLI MY++ G I +A F EMK
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK- 379
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
KDV +W ++I GY HG A++L+ +M+ +I P +TF+S+L+AC+H G E G +
Sbjct: 380 EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWK 439
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP--VKPDKAVWGALLGSCR 583
+++MIN +GIE R EH + +D+L R G L+EA LI S V + WGA L +CR
Sbjct: 440 IYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACR 499
Query: 584 VHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEK-NVKKQTG 642
HGNV+L++VAA L+S+EP Y+ L ++YA WD+A R LM+E + K G
Sbjct: 500 RHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPG 559
Query: 643 YSWV 646
YS V
Sbjct: 560 YSLV 563
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 183/404 (45%), Gaps = 58/404 (14%)
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
+Q + LI Y + G V+ AR+LFDRI +R+VVSW +M+ + + G
Sbjct: 47 LQLKDMLIDLYLKQGDVKHARKLFDRIS-------------KRDVVSWTAMISRFSRCGY 93
Query: 291 IVSARELFDSMGERDTCA----WNTMISGYVQISDMEEASKLFKEMPSPDA----LSWNS 342
A LF M D A + +++ + ++E ++ + + + ++
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
++S +A+ G ++ A+ F+ M +++L+SWN++I GY N + LF M EG+KPD
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFN 461
T S+L + L + ++H L K + SL+ Y +CG++ A +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 462 EMKFYKDVITWNAMIGGYA-SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV 520
K +D+++ A+I G++ + DA ++FK M R+K + S+L C V
Sbjct: 274 GTK-KRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 521 EEGRR-----------QF-----NSMINDYG---------------IEPRVEHFASFVDI 549
GR+ +F NS+I+ Y E V + S +
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAG 392
Query: 550 LGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVEL 590
GR G ++A+DL N M +KP+ + +LL +C G EL
Sbjct: 393 YGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTEL 436
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 214/528 (40%), Gaps = 112/528 (21%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS 106
++ G + AR FD + R+ V+W +IS + A LF EM + D+ +
Sbjct: 58 LKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYG 117
Query: 107 GYF-SCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNGRMDQALKLFDAMPER 161
SC ++EG ++ + + +C + + ++S YA+ G+M++A FD+M ER
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER 177
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM------PEC----------------------- 192
+ VS NA+I G+ N D++ F+ M P+C
Sbjct: 178 DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELH 237
Query: 193 ----------DSASLSALISGLVRNGELDMAAGILLECGDGDEG--KHDLVQAYNTLIAG 240
SA + +L++ V+ G L A + EG K DL+ LI G
Sbjct: 238 GLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL-------HEGTKKRDLLSC-TALITG 289
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN---VVSWNSMMMCY----VKVGDIVS 293
+ Q + +D D +D R + VV + + +C V +G +
Sbjct: 290 FSQQ----------NNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIH 339
Query: 294 ARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDL 353
L S D N++I Y + ++E+A F+EM D SW S+I+G+ + G+
Sbjct: 340 GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN- 398
Query: 354 KVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
FE+ AI+L+++M+ E KP+ T S+LS C
Sbjct: 399 ------FEK------------------------AIDLYNRMEHERIKPNDVTFLSLLSAC 428
Query: 414 TGLVDLYLGKQMH-QLVTKTVIPDLPINNS-LITMYSRCGAIGEACTVFNEMKFYKDV-- 469
+ LG +++ ++ K I + S +I M +R G + EA + + +
Sbjct: 429 SHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSS 488
Query: 470 ITWNAMIGGYASHG----LAVDALELFKQMKRLKIHPTYITFISVLNA 513
TW A + HG V A +L R ++ YI SV A
Sbjct: 489 STWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVN--YINLASVYAA 534
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 236/423 (55%), Gaps = 13/423 (3%)
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
V Y +I G+ SG+ + L+ R+ ++ N V + + C +KV
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNS--------VLPDNYVITSVLKACDLKVCR 143
Query: 291 IVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQI 350
+ A+ L G + M+ Y + ++ A K+F EMP D ++ +I+ +++
Sbjct: 144 EIHAQVLKLGFGSSRSVGLK-MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G +K A + F+ + K+ + W ++I G +N++ A+ELF +MQ+E + T VL
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVL 262
Query: 411 SVCTGLVDLYLGKQMHQLVTKTVIPDLP--INNSLITMYSRCGAIGEACTVFNEMKFYKD 468
S C+ L L LG+ +H V + +L + N+LI MYSRCG I EA VF M+ KD
Sbjct: 263 SACSDLGALELGRWVHSFVENQRM-ELSNFVGNALINMYSRCGDINEARRVFRVMR-DKD 320
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
VI++N MI G A HG +V+A+ F+ M P +T +++LNAC+H GL++ G FN
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
SM + +EP++EH+ VD+LGR G+L+EA I ++P++PD + G LL +C++HGN+
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Query: 589 ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
EL + A+ L E SG YVLL N+YA+ W ++ +R M + ++K+ G S ++
Sbjct: 441 ELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Query: 649 SNR 651
N+
Sbjct: 501 DNQ 503
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 188/471 (39%), Gaps = 95/471 (20%)
Query: 111 CCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVI 170
C V+ +F + + + +I G+ +GR + L+ M + + N VI
Sbjct: 71 CSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVI 130
Query: 171 TGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL 230
T L CD + + +L+ G G L
Sbjct: 131 TSVL---------------KACDLKVCREIHAQ-------------VLKLGFGSSRSVGL 162
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
++ YG+SG++ A+++FD +P+ R+ V+ M+ CY + G
Sbjct: 163 -----KMMEIYGKSGELVNAKKMFDEMPD-------------RDHVAATVMINCYSECGF 204
Query: 291 IVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALS----------- 339
I A ELF + +DT W MI G V+ +M +A +LF+EM + +
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 340 -----------W-----------------NSIISGFAQIGDLKVAKDFFERMPQKNLISW 371
W N++I+ +++ GD+ A+ F M K++IS+
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLVDLYLGKQMHQLV 429
N++I+G + AI F M G +P++ TL ++L+ C+ GL+D+ L
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 430 TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDAL 489
V P + ++ + R G + EA + D I ++ HG +
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG----NM 440
Query: 490 ELFKQM-KRL--KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIE 537
EL +++ KRL +P T++ + N A +G +E SM D GIE
Sbjct: 441 ELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESM-RDSGIE 490
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 43/295 (14%)
Query: 326 SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
+K+ + DA +I + + + A D F + N+ + ++I G+ +
Sbjct: 50 AKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSA 109
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV---------------- 429
+ L+ +M PD + ++SVL C DL + +++H V
Sbjct: 110 DGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMM 165
Query: 430 -----------TKTVIPDLPINNS-----LITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
K + ++P + +I YS CG I EA +F ++K KD + W
Sbjct: 166 EIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKI-KDTVCWT 224
Query: 474 AMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
AMI G + ALELF++M+ + T + VL+AC+ G +E G R +S + +
Sbjct: 225 AMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG-RWVHSFVEN 283
Query: 534 YGIEPRVEHFA--SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
+E + +F + +++ R G + EA + M K D + ++ +HG
Sbjct: 284 QRME--LSNFVGNALINMYSRCGDINEARRVFRVMRDK-DVISYNTMISGLAMHG 335
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 189/447 (42%), Gaps = 71/447 (15%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
++ + I + +GR ++ + + M H + + N +I+ +K ++ R++ ++ +
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLK 151
Query: 96 RDIVSWNLIISGYFSCCG-SKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
S + G S + +K+FDEMP+RD V+ +I+ Y++ G + +AL+L
Sbjct: 152 LGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALEL 211
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
F + ++ V A+I G + N +++ A+ F+ M + ++ S + + V + D+ A
Sbjct: 212 FQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGA 270
Query: 215 GILLECGDGDEGKHDLVQ---------AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
LE G H V+ N LI Y + G + EARR+F R+ D
Sbjct: 271 ---LELG---RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF-RVMRD----- 318
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA 325
+D ++NTMISG EA
Sbjct: 319 --------------------------------------KDVISYNTMISGLAMHGASVEA 340
Query: 326 SKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKN 381
F++M + P+ ++ ++++ + G L + + F M K + + I Y
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM--KRVFNVEPQIEHYGCI 398
Query: 382 EDYKGAI----ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDL 437
D G + E + ++ +PD L ++LS C ++ LG+++ + + ++ PD
Sbjct: 399 VDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDS 458
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMK 464
L +Y+ G E+ + M+
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMR 485
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 186/643 (28%), Positives = 317/643 (49%), Gaps = 61/643 (9%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLF- 90
E+SLL + + TG LS+A FD M R+ V W+TL+S ++ E+ KA ++F
Sbjct: 139 ETSLLCMYGQ-------TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFK 191
Query: 91 ---DEMPQRDIVSWNLIISGY--FSCCGSKFVEEG---RKLFDEMPERDCVSWNTVISGY 142
D+ + D V+ ++ G C G RK+FD + E C N++++ Y
Sbjct: 192 CMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD-LDETLC---NSLLTMY 247
Query: 143 AKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLS 198
+K G + + ++F+ + ++NAVS A+I+ + + A+ F M E + +L
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 199 ALIS-----GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRL 253
+++S GL+R G+ + E D L A L+ Y + GK+ + +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRREL---DPNYESLSLA---LVELYAECGKLSDCETV 361
Query: 254 FDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAW 309
R+ +D RN+V+WNS++ Y G ++ A LF M + D
Sbjct: 362 L-RVVSD------------RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTL 408
Query: 310 NTMIS-----GYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP 364
+ IS G V + + ++ D NS+I +++ G + A F ++
Sbjct: 409 ASSISACENAGLVPLGKQIHGHVIRTDVS--DEFVQNSLIDMYSKSGSVDSASTVFNQIK 466
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
+++++WNS++ G+ +N + AI LF M + + T +V+ C+ + L GK
Sbjct: 467 HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKW 526
Query: 425 MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
+H + + + DL + +LI MY++CG + A TVF M V ++MI Y HG
Sbjct: 527 VHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSW-SSMINAYGMHGR 585
Query: 485 AVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
A+ F QM P + F++VL+AC H+G VEEG+ FN ++ +G+ P EHFA
Sbjct: 586 IGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNSEHFA 644
Query: 545 SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPE 604
F+D+L R G L+EA I MP D +VWG+L+ CR+H +++ + L + +
Sbjct: 645 CFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTD 704
Query: 605 SSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+G Y LL N+YA W++ R+R M+ N+KK GYS ++
Sbjct: 705 DTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 154/620 (24%), Positives = 290/620 (46%), Gaps = 93/620 (15%)
Query: 44 SHLIRTGRL--------------------SEARTFFDSMKHRNTVTWNTLISGHVKRREI 83
+HL+ TGRL +R F++ + ++ + LI +V +
Sbjct: 22 AHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLL 81
Query: 84 AKARQLFDEM-PQRDIVSWNLIISGYFSCCGSK-FVEEGRKLFDEM----PERDCVSWNT 137
A L+ + + +S + S +C GS+ + G K+ + + D V +
Sbjct: 82 DAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 138 VISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECD 193
++ Y + G + A K+FD MP R+ V+ + +++ L NG+V A+ FK M E D
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201
Query: 194 SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY-NTLIAGYGQSGKVEEARR 252
+ ++ +++ G G L +A + G DL + N+L+ Y + G + + R
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVH---GQITRKMFDLDETLCNSLLTMYSKCGDLLSSER 258
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD-----IVSARELFDSMGERDTC 307
+F++I ++N VSW +M+ Y + G+ + S E+ S E +
Sbjct: 259 IFEKIA-------------KKNAVSWTAMISSYNR-GEFSEKALRSFSEMIKSGIEPNLV 304
Query: 308 AWNTMISGYVQISDMEEASKLF-----KEM-PSPDALSWNSIISGFAQIGDLKVAKDFFE 361
+++S I + E + +E+ P+ ++LS +++ +A+ G L +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-ALVELYAECGKLSDCETVLR 363
Query: 362 RMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYL 421
+ +N+++WNSLI+ Y A+ LF QM + KPD TL+S +S C + L
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 422 GKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYAS 481
GKQ+H V +T + D + NSLI MYS+ G++ A TVFN++K ++ V+TWN+M+ G++
Sbjct: 424 GKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSMLCGFSQ 482
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI-----NDYGI 536
+G +V+A+ LF M + +TF++V+ AC+ G +E+G+ + +I + +
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD 542
Query: 537 EPRVEHFAS------------------------FVDILGRQGQLQEAMDLINSMP---VK 569
++ +A ++ G G++ A+ N M K
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTK 602
Query: 570 PDKAVWGALLGSCRVHGNVE 589
P++ V+ +L +C G+VE
Sbjct: 603 PNEVVFMNVLSACGHSGSVE 622
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 162/538 (30%), Positives = 291/538 (54%), Gaps = 29/538 (5%)
Query: 128 PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFK 187
P++ + +I Y + G +++A LFD MP+R+ V+ A+ITG+ + A F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 188 RMPECDSA----SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQ 243
M + ++ +LS+++ RN ++ +A G L+ G + N ++ Y
Sbjct: 101 EMVKQGTSPNEFTLSSVLKS-CRNMKV-LAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
EA L R D K +N V+W +++ + +GD + +++ M
Sbjct: 159 CSVTMEAACLIFR------DIK------VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLL 206
Query: 304 RDTCAWNTMISGYVQISDMEEASKLFKEMPS--------PDALSWNSIISGFAQIGDLKV 355
+ I+ V+ S ++ K++ + + NSI+ + + G L
Sbjct: 207 ENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSE 266
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
AK +F M K+LI+WN+LI+ +++ D A+ +F + + +G P+ +T +S+++ C
Sbjct: 267 AKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACAN 325
Query: 416 LVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
+ L G+Q+H ++ + ++ + N+LI MY++CG I ++ VF E+ +++++W +
Sbjct: 326 IAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTS 385
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
M+ GY SHG +A+ELF +M I P I F++VL+AC HAGLVE+G + FN M ++Y
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG-NVELAQV 593
GI P + + VD+LGR G++ EA +L+ MP KPD++ WGA+LG+C+ H N ++++
Sbjct: 446 GINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRL 505
Query: 594 AAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
AA+ ++ L+P+ G YV+L +YA W D RVR +M KK+ G SW+ N+
Sbjct: 506 AARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQ 563
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 202/480 (42%), Gaps = 78/480 (16%)
Query: 59 FDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVE 118
+ KH T LI + ++ + +AR LFDEMP RD+V+W +I+GY S S +
Sbjct: 39 YKPKKHHILAT--NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYAS---SNYNA 93
Query: 119 EGRKLFDEMPERDCVSWNTVISGYAKNGRMDQAL---KLFDAMPERNAVSSNAVITGFLL 175
+ F EM ++ +S K+ R + L L + + + + + ++
Sbjct: 94 RAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMM 153
Query: 176 NG------DVDSAVGFFKRMPECDSASLSALISGLVRNGE----LDMAAGILLECGDGDE 225
N +++A F+ + + + + LI+G G+ L M +LLE
Sbjct: 154 NMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLE------ 207
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
N + Y + V + + Q R F+ N+ NS++ Y
Sbjct: 208 ---------NAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 286 VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWN 341
+ G + A+ F M ++D WNT+IS ++ SD EA +F+ S P+ ++
Sbjct: 259 CRCGYLSEAKHYFHEMEDKDLITWNTLISE-LERSDSSEALLMFQRFESQGFVPNCYTFT 317
Query: 342 SIISGFAQIGDLKVAKD------------------------------------FFERMPQ 365
S+++ A I L + F E + +
Sbjct: 318 SLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR 377
Query: 366 KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGK 423
+NL+SW S++ GY + A+ELF +M G +PDR +VLS C GLV+ L K
Sbjct: 378 RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGL-K 436
Query: 424 QMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
+ + ++ I PD I N ++ + R G IGEA + M F D TW A++G +H
Sbjct: 437 YFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAH 496
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 22/226 (9%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
R G LSEA+ +F M+ ++ +TWNTLIS ++R + ++A +F + V +
Sbjct: 260 RCGYLSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALLMFQRFESQGFVPNCYTFTS 318
Query: 108 YFSCCGS-KFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLF-DAMPER 161
+ C + + G++L + R + N +I YAK G + + ++F + + R
Sbjct: 319 LVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRR 378
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALIS-----GLVRNGELDM 212
N VS +++ G+ +G AV F +M D A++S GLV G +
Sbjct: 379 NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKG---L 435
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
++E G D+ YN ++ G++GK+ EA L +R+P
Sbjct: 436 KYFNVMESEYGINPDRDI---YNCVVDLLGRAGKIGEAYELVERMP 478
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 184/703 (26%), Positives = 317/703 (45%), Gaps = 124/703 (17%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIVSWNLIISG 107
LS A F M+HR+ V+WNT+++ + K+ Q F M + D V+++ +IS
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS- 297
Query: 108 YFSCCGSKFVEEGRKLFDEM------PERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
+C + + G L + PE N++IS Y+K G + A +F+ + R
Sbjct: 298 --ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS--------ASLSALISGL--------- 204
+ +SSNA++ GF NG + A G +M D S++++ L
Sbjct: 356 DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV 415
Query: 205 ---------------VRNGELDMAAGILLECGDGDEGK-------HDLVQAYNTLIAGYG 242
V N +DM +CG + + H + ++N++I+ +
Sbjct: 416 HGYTVRMEMQSRALEVINSVIDMYG----KCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 243 QSGKVEEARRLFDRIPNDQGDGK---------------EDGRRFRRNVVSWNSMMMCYVK 287
Q+G +A+ LF + ++ K D F ++V W K
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCW------LQK 525
Query: 288 VGDIVSARELFDSMGE-RDTCAWNTMISGYVQISDMEEASKLFKEMPSP----------- 335
+GD+ SA ++M E RD +WN++ISG E+ + F+ M
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 336 -----------------------------DALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
D N++I+ + + D++ A F +
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
NL SWN +I+ +N+ + +LF ++LE P+ T +LS T L G Q H
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 427 -QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
L+ + + ++ +L+ MYS CG + VF + WN++I + HG+
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV-NSISAWNSVISAHGFHGMG 761
Query: 486 VDALELFKQMK-RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
A+ELFK++ ++ P +FIS+L+AC+H+G ++EG + M +G++P EH
Sbjct: 762 EKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRV 821
Query: 545 SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPE 604
VD+LGR G+L+EA + I + VWGALL +C HG+ +L + A+ L +EP+
Sbjct: 822 WIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPD 881
Query: 605 SSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
++ Y+ L N Y L W++A R+R ++E+ +KK GYS +D
Sbjct: 882 NASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVID 924
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 45/371 (12%)
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM 332
+++ + + ++ Y + G++VS+ LFD + E+D WN+MI+ Q A LF EM
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 333 PSP---------------------------------------DALSWNSIISGFAQIGDL 353
D+ N++++ +A+ +L
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 354 KVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
A+ F M ++++SWN+++ N + +++ F M G++ D T S V+S C
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 414 TGLVDLYLGKQMHQLVTKT-VIPD--LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
+ + +L LG+ +H LV K+ P+ + + NS+I+MYS+CG A TVF E+ +DVI
Sbjct: 300 SSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL-VCRDVI 358
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRL-KIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+ NA++ G+A++G+ +A + QM+ + KI P T +S+ + C EGR
Sbjct: 359 SSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
+ +E S +D+ G+ G +A +L+ D W +++ + +G
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISAFSQNGFTH 477
Query: 590 LAQVAAQALIS 600
A+ + ++S
Sbjct: 478 KAKNLFKEVVS 488
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 209/472 (44%), Gaps = 65/472 (13%)
Query: 58 FFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFV 117
+F KH+ T + L LFDE+P+R+ N + F F+
Sbjct: 46 YFSKRKHKRHFTSSVL------SPVTPIVHNLFDELPERE----NRTMESSF-----MFL 90
Query: 118 EEGRKLF-----DEMPE------------RDCVSWNTVISGYAKNGRMDQALKLFDAMPE 160
+ + F E P +D + + +++ Y + G + + LFD + E
Sbjct: 91 RDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKE 150
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGI 216
++ + N++IT NG +AVG F M E DS +L S L +
Sbjct: 151 KDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCS-- 208
Query: 217 LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
+L C + G N L+ Y + + A +F + + R++V
Sbjct: 209 MLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH-------------RDIV 255
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL---- 328
SWN++M + G + + F SM E DT ++ +IS I ++ L
Sbjct: 256 SWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLV 315
Query: 329 FKEMPSPDA--LSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKG 386
K SP+A NSIIS +++ GD + A+ FE + +++IS N+++ G+ N ++
Sbjct: 316 IKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEE 375
Query: 387 AIELFSQMQ-LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD--LPINNSL 443
A + +QMQ ++ +PD T+ S+ S+C L G+ +H + + L + NS+
Sbjct: 376 AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSV 435
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
I MY +CG +A +F ++D+++WN+MI ++ +G A LFK++
Sbjct: 436 IDMYGKCGLTTQAELLFKTTT-HRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 161/393 (40%), Gaps = 65/393 (16%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
+S L N I + G ++A F + HR+ V+WN++IS + KA+ LF
Sbjct: 425 QSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFK 484
Query: 92 EMPQR---DIVSWNLIISGYFSCCGSKFVEEGRKL----------------FDEMPE-RD 131
E+ S + +++ SC S + G+ + + M E RD
Sbjct: 485 EVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRD 544
Query: 132 CVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVI----------TGFLLNGDVDS 181
SWN+VISG A +G ++L+ F AM + + + G +L G
Sbjct: 545 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 182 AVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGY 241
+ K + E D+ + LI+ R +++ A + D + + ++N +I+
Sbjct: 605 GLA-IKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN------LCSWNCVISAL 657
Query: 242 GQSGKVEEARRLFDRI---PND--------------------QGDGKEDGRRFRRNVVSW 278
Q+ E +LF + PN+ Q R F+ N
Sbjct: 658 SQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 717
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS---- 334
+++ Y G + + ++F + G AWN++IS + E+A +LFKE+ S
Sbjct: 718 AALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEM 777
Query: 335 -PDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
P+ S+ S++S + G + ++++M +K
Sbjct: 778 EPNKSSFISLLSACSHSGFIDEGLSYYKQMEEK 810
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 129/279 (46%), Gaps = 20/279 (7%)
Query: 297 LFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP--------------DALSWNS 342
LFD + ER+ TM S ++ + D+ + + E +P D + +
Sbjct: 71 LFDELPEREN---RTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSK 127
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
+++ + + G+L + F+ + +K++I WNS+I ++N Y A+ LF +M +G + D
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFN 461
TL S + L +H L +T ++ D + N+L+ +Y++ + A VF
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 462 EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
M+ ++D+++WN ++ ++G +L+ FK M +TF V++AC+ +
Sbjct: 248 HME-HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 522 EGRRQFNSMIND-YGIEPRVEHFASFVDILGRQGQLQEA 559
G +I Y E V S + + + G + A
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 237/431 (54%), Gaps = 23/431 (5%)
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
G +D + N+L+ YG G+ A ++F +P R+VVSW ++ +
Sbjct: 136 GFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP-------------VRDVVSWTGIITGF 182
Query: 286 VKVGDIVSARELFDSMGERDTCAWNTMI---SGYVQISDMEEA--SKLFKEMPSPDALSW 340
+ G A + F M A + SG V + + + K +
Sbjct: 183 TRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE-GE 399
N++I + + L A F + +K+ +SWNS+I+G E K AI+LFS MQ G
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQ-LVTKTVIPDLPINNSLITMYSRCGAIGEACT 458
KPD H L+SVLS C L + G+ +H+ ++T + D I +++ MY++CG I A
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
+FN ++ K+V TWNA++GG A HG +++L F++M +L P +TF++ LNAC H G
Sbjct: 363 IFNGIR-SKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTG 421
Query: 519 LVEEGRRQFNSMIN-DYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGA 577
LV+EGRR F+ M + +Y + P++EH+ +D+L R G L EA++L+ +MPVKPD + GA
Sbjct: 422 LVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGA 481
Query: 578 LLGSCRVHGNV-ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKN 636
+L +C+ G + EL + + + +E E SG YVLL N++A WDD R+R LM+ K
Sbjct: 482 ILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKG 541
Query: 637 VKKQTGYSWVD 647
+ K G S+++
Sbjct: 542 ISKVPGSSYIE 552
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
S+N+L++ Y + + I + G PD T V C + GKQ+H +V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 430 TKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
TK D+ + NSL+ Y CG AC VF EM +DV++W +I G+ GL +A
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPV-RDVVSWTGIITGFTRTGLYKEA 191
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
L+ F +M + P T++ VL + G + G + + +I +E + +D
Sbjct: 192 LDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLG-KGIHGLILKRASLISLETGNALID 247
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG 607
+ + QL +AM + + K DK W +++ S VH E ++ A L SL SSG
Sbjct: 248 MYVKCEQLSDAMRVFGELE-KKDKVSWNSMI-SGLVH--CERSKEAID-LFSLMQTSSG 301
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 167/403 (41%), Gaps = 68/403 (16%)
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
DI N ++ Y C S+ K+F EMP RD VSW +I+G+ + G +AL F
Sbjct: 140 DIYVQNSLVHFYGVCGESR---NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFS 196
Query: 157 AMP-ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
M E N + V+ +G V SL I GL+ L A+
Sbjct: 197 KMDVEPNLATYVCVLVS---SGRV-------------GCLSLGKGIHGLI----LKRASL 236
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
I LE G N LI Y + ++ +A R+F G +++
Sbjct: 237 ISLETG-------------NALIDMYVKCEQLSDAMRVF-------------GELEKKDK 270
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMG-----ERDTCAWNTMISGYVQISDMEEASKLFK 330
VSWNSM+ V A +LF M + D +++S + ++ +
Sbjct: 271 VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG-RWVH 329
Query: 331 EMPSPDALSWNS-----IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
E + W++ I+ +A+ G ++ A + F + KN+ +WN+L+ G +
Sbjct: 330 EYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGL 389
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQ-MHQLVTK--TVIPDLPIN 440
++ F +M G KP+ T + L+ C TGLVD G++ H++ ++ + P L
Sbjct: 390 ESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVD--EGRRYFHKMKSREYNLFPKLEHY 447
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+I + R G + EA + M DV A++ + G
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG 490
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
L N I ++ +LS+A F ++ ++ V+WN++ISG V +A LF M
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 96 RD-IVSWNLIISGYFSCCGS-KFVEEGRKLFDEMPERDCVSWNT-----VISGYAKNGRM 148
I I++ S C S V+ GR + + + + W+T ++ YAK G +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYI 357
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGL 204
+ AL++F+ + +N + NA++ G ++G ++ +F+ M + + + A ++
Sbjct: 358 ETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNAC 417
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
G +D + + ++ Y +I ++G ++EA L +P
Sbjct: 418 CHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMP 471
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/546 (30%), Positives = 277/546 (50%), Gaps = 44/546 (8%)
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
+ D+ P + ++++ YAK G M +A+ +F ER+ NA+I+GF++NG
Sbjct: 89 KGFLDDSPR----AGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPL 143
Query: 181 SAVGFFKRMPE----CDSASLSALISG--LVRNGELDMAAGILLECG-DGDEGKHDLVQA 233
A+ ++ M D + +L+ G + ++ G+ + G D D
Sbjct: 144 DAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSD------CYV 197
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
+ L+ Y + VE+A+++FD +P+ R + V WN+++ Y ++
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPD------------RDDSVLWNALVNGYSQIFRFED 245
Query: 294 ARELFDSMGERDTC----AWNTMISGYVQISDMEEASKL----FKEMPSPDALSWNSIIS 345
A +F M E +++S + D++ + K D + N++I
Sbjct: 246 ALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALID 305
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+ + L+ A FE M +++L +WNS++ +D D+ G + LF +M G +PD T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-----INNSLITMYSRCGAIGEACTVF 460
L++VL C L L G+++H + + + + I+NSL+ MY +CG + +A VF
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV 520
+ M+ KD +WN MI GY AL++F M R + P ITF+ +L AC+H+G +
Sbjct: 426 DSMRV-KDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFL 484
Query: 521 EEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
EGR M Y I P +H+A +D+LGR +L+EA +L S P+ + VW ++L
Sbjct: 485 NEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILS 544
Query: 581 SCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQ 640
SCR+HGN +LA VA + L LEPE G YVL+ N+Y +++ VR M ++NVKK
Sbjct: 545 SCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKT 604
Query: 641 TGYSWV 646
G SW+
Sbjct: 605 PGCSWI 610
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 214/487 (43%), Gaps = 51/487 (10%)
Query: 65 RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKL- 123
R+ +N LISG V A + + EM I+ + + + +K+
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVH 183
Query: 124 ---FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER-NAVSSNAVITGFLLNGDV 179
F + DC + +++ Y+K ++ A K+FD +P+R ++V NA++ G+
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 180 DSAVGFFKRMPE----CDSASLSALISGLVRNGELDMA---AGILLECGDGDEGKHDLVQ 232
+ A+ F +M E ++++++S +G++D G+ ++ G G + +
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD-----IV 298
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
N LI YG+S +EEA +F+ + R++ +WNS++ + GD
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMD-------------ERDLFTWNSVLCVHDYCGDHD 345
Query: 293 SARELFDSM---GER-DTCAWNTMISGYVQISDMEEASKLFKEM--------PSPDALSW 340
LF+ M G R D T++ +++ + + ++ M S +
Sbjct: 346 GTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH 405
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
NS++ + + GDL+ A+ F+ M K+ SWN +I GY + A+++FS M G K
Sbjct: 406 NSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVK 465
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQ-MHQLVTKTVIPDLPINN---SLITMYSRCGAIGEA 456
PD T +L C+ L G+ + Q+ +TV LP ++ +I M R + EA
Sbjct: 466 PDEITFVGLLQACSHSGFLNEGRNFLAQM--ETVYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 457 CTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI-TFISVLNACA 515
+ + + W +++ HG AL K++ L+ P + ++ + N
Sbjct: 524 YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELE--PEHCGGYVLMSNVYV 581
Query: 516 HAGLVEE 522
AG EE
Sbjct: 582 EAGKYEE 588
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 136/353 (38%), Gaps = 90/353 (25%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKH------RNTVTWNTLISGHV 78
F + D + S+L WN ++ + R +A F M+ R+T+T +++S
Sbjct: 218 FDELPDRDDSVL--WNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTIT--SVLSAFT 273
Query: 79 KRREIAKARQLFDEMPQ----RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS 134
+I R + + DIV N +I Y SK++EE +F+ M ERD +
Sbjct: 274 VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGK---SKWLEEANSIFEAMDERDLFT 330
Query: 135 WNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS 194
WN+V+ + G D L LF+ M L +G V +P C
Sbjct: 331 WNSVLCVHDYCGDHDGTLALFERM---------------LCSGIRPDIVTLTTVLPTC-- 373
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
L++L G +G + ++ LL +E H N+L+ Y + G + +AR +F
Sbjct: 374 GRLASLRQGREIHGYMIVSG--LLNRKSSNEFIH------NSLMDMYVKCGDLRDARMVF 425
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
DSM +D+ +WN MI+
Sbjct: 426 --------------------------------------------DSMRVKDSASWNIMIN 441
Query: 315 GYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
GY S E A +F M PD +++ ++ + G L ++F +M
Sbjct: 442 GYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 1 MSTCLMRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFD 60
+ TC RL+ L+ R + + S + + +H N + ++ G L +AR FD
Sbjct: 370 LPTC-GRLASLRQGREIHGYMIVSGLLNRKSSNEFIH--NSLMDMYVKCGDLRDARMVFD 426
Query: 61 SMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG-SKFVEE 119
SM+ +++ +WN +I+G+ + A +F M + + + G C S F+ E
Sbjct: 427 SMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNE 486
Query: 120 GRKLFDEM-------PERDCVSWNTVISGYAKNGRMDQALKLFDAMPE-RNAVSSNAVIT 171
GR +M P D + VI + ++++A +L + P N V ++++
Sbjct: 487 GRNFLAQMETVYNILPTSD--HYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILS 544
Query: 172 GFLLNGDVDSAVGFFKRMPE 191
L+G+ D A+ KR+ E
Sbjct: 545 SCRLHGNKDLALVAGKRLHE 564
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 267/539 (49%), Gaps = 51/539 (9%)
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
+ RK+FDE+P+R +N++I Y++ D+ L+L+D M ++ T
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFT----- 120
Query: 177 GDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT 236
++ A +SGLV + G + C D G + V ++
Sbjct: 121 ------------------MTIKACLSGLV------LEKGEAVWCKAVDFGYKNDVFVCSS 156
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
++ Y + GK++EA LF G+ +R+V+ W +M+ + + G + A E
Sbjct: 157 VLNLYMKCGKMDEAEVLF-------------GKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 297 LFDSMGERDTCAWNTMISGYVQIS-DMEEASK-------LFKEMPSPDALSWNSIISGFA 348
+ M ++ G +Q S D+ + L++ + + S++ +A
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYA 263
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
++G ++VA F RM K +SW SLI+G+ +N A E +MQ G +PD TL
Sbjct: 264 KVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVG 323
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
VL C+ + L G+ +H + K + D +L+ MYS+CGA+ + +F + KD
Sbjct: 324 VLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVG-RKD 382
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
++ WN MI Y HG + + LF +M I P + TF S+L+A +H+GLVE+G+ F+
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
MIN Y I+P +H+ +D+L R G+++EA+D+INS + +W ALL C H N+
Sbjct: 443 VMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNL 502
Query: 589 ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ +AA ++ L P+S G L+ N +A W + +VR LM ++K GYS ++
Sbjct: 503 SVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIE 561
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 108/468 (23%), Positives = 208/468 (44%), Gaps = 63/468 (13%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIVSWNL 103
R G +S AR FD + R +N++I + + + + +L+D+M Q D ++ +
Sbjct: 62 RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTM 121
Query: 104 IISGYFSCCGSKFVEEGR----KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
I +C +E+G K D + D ++V++ Y K G+MD+A LF M
Sbjct: 122 TIK---ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA 178
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
+R+ + ++TGF G AV F++ M ++ GL++ A+G L
Sbjct: 179 KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQ------ASGDL-- 230
Query: 220 CGDGDEGKHDLVQAYNT-----------LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
GD G+ Y T L+ Y + G +E A R+F R+
Sbjct: 231 -GDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM----------- 278
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN----TMISGYVQISDME- 323
+ VSW S++ + + G A + F+++ E + + T++ V S +
Sbjct: 279 --MFKTAVSWGSLISGFAQNG---LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 324 -EASKLFK----EMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGY 378
+ +L + D ++ +++ +++ G L +++ FE + +K+L+ WN++I+ Y
Sbjct: 334 LKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTK--TVI 434
+ + + + LF +M +PD T +S+LS +GLV+ G+ ++ +
Sbjct: 394 GIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVE--QGQHWFSVMINKYKIQ 451
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
P LI + +R G + EA + N K + W A++ G +H
Sbjct: 452 PSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 200/317 (63%), Gaps = 3/317 (0%)
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
D +S++ +A+ G++ A+ F+ MPQ+N+++W+ ++ GY + + + A+ LF +
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 396 LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNS-LITMYSRCGAIG 454
E + ++ SSV+SVC L LG+Q+H L K+ S L+++YS+CG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
A VFNE+ K++ WNAM+ YA H +ELFK+MK + P +ITF++VLNAC
Sbjct: 270 GAYQVFNEVPV-KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAV 574
+HAGLV+EGR F+ M + IEP +H+AS VD+LGR G+LQEA+++I +MP+ P ++V
Sbjct: 329 SHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 575 WGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEE 634
WGALL SC VH N ELA AA + L P SSG ++ L N YA ++DA + R L+ +
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Query: 635 KNVKKQTGYSWVDSSNR 651
+ KK+TG SWV+ N+
Sbjct: 448 RGEKKETGLSWVEERNK 464
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 122/231 (52%), Gaps = 4/231 (1%)
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
FE PQK+ +W+S+I+ + +NE ++E +M +PD H L S C L
Sbjct: 73 FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRC 132
Query: 420 YLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
+G+ +H L KT D+ + +SL+ MY++CG I A +F+EM ++V+TW+ M+ G
Sbjct: 133 DIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMMYG 191
Query: 479 YASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEP 538
YA G +AL LFK+ + +F SV++ CA++ L+E G RQ + + +
Sbjct: 192 YAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG-RQIHGLSIKSSFDS 250
Query: 539 RVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
+S V + + G + A + N +PVK + +W A+L + H + +
Sbjct: 251 SSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 128/296 (43%), Gaps = 49/296 (16%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKE-- 331
+V +S++ Y K G+IV AR++FD M +R+ W+ M+ GY Q+ + EEA LFKE
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 332 ----------MPSPDALSWNS---------------------------IISGFAQIGDLK 354
S ++ NS ++S +++ G +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
A F +P KNL WN+++ Y ++ + IELF +M+L G KP+ T +VL+ C+
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 415 --GLVD--LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
GLVD Y QM + + P SL+ M R G + EA V M
Sbjct: 330 HAGLVDEGRYYFDQMKE---SRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI-TFISVLNACAHAGLVEEGRR 525
W A++ H L F K ++ P IS+ NA A G E+ +
Sbjct: 387 VWGALLTSCTVH--KNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAK 440
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 31/232 (13%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G + AR FD M RN VTW+ ++ G+ + E +A LF E ++ + S
Sbjct: 163 KCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSS 222
Query: 108 YFSCCG-SKFVEEGRKLF----DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
S C S +E GR++ + ++++S Y+K G + A ++F+ +P +N
Sbjct: 223 VISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKN 282
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLEC-- 220
NA++ + + + FKRM +SG+ N +L C
Sbjct: 283 LGIWNAMLKAYAQHSHTQKVIELFKRMK----------LSGMKPN--FITFLNVLNACSH 330
Query: 221 -GDGDEGKHDLVQA-----------YNTLIAGYGQSGKVEEARRLFDRIPND 260
G DEG++ Q Y +L+ G++G+++EA + +P D
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID 382
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 123/298 (41%), Gaps = 65/298 (21%)
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM- 189
D ++++ YAK G + A K+FD MP+RN V+ + ++ G+ G+ + A+ FK
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 190 ---PECDSASLSALISGLVRNGELDMAAGILLECGDGDEG------KHDLVQAYNTLIAG 240
+ S S++IS A LLE G G ++L++
Sbjct: 210 FENLAVNDYSFSSVISVC--------ANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSL 261
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
Y + G E A ++F+ +P +N+ WN+M+ Y + ELF
Sbjct: 262 YSKCGVPEGAYQVFNEVP-------------VKNLGIWNAMLKAYAQHSHTQKVIELFKR 308
Query: 301 MGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
M ++S M+ P+ +++ ++++ + G + + +F
Sbjct: 309 M----------------KLSGMK-----------PNFITFLNVLNACSHAGLVDEGRYYF 341
Query: 361 ERMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
++M + + + SL+ + + A+E+ + M ++ P ++L+ CT
Sbjct: 342 DQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID---PTESVWGALLTSCT 396
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 209/352 (59%), Gaps = 7/352 (1%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
++D ++++ Y D+ A ++F + S D +WNS+++ +A+ G + A+ F+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-----KPDRHTLSSVLSVCTGLV 417
MP++N+ISW+ LI GY YK A++LF +MQL +P+ T+S+VLS C L
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 418 DLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
L GK +H + K + D+ + +LI MY++CG++ A VFN + KDV ++AMI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 477 GGYASHGLAVDALELFKQMKRL-KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYG 535
A +GL + +LF +M I+P +TF+ +L AC H GL+ EG+ F MI ++G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 536 IEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAA 595
I P ++H+ VD+ GR G ++EA I SMP++PD +WG+LL R+ G+++ + A
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 596 QALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ LI L+P +SG YVLL N+YA W + + +R ME K + K G S+V+
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVE 445
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 46/294 (15%)
Query: 109 FSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNA 168
+S CG + +++FD+ +D +WN+V++ YAK G +D A KLFD MPERN +S +
Sbjct: 107 YSSCGD--LRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSC 164
Query: 169 VITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLEC---GDGDE 225
+I G+++ G A+ F+ M L VR E M+ +L C G ++
Sbjct: 165 LINGYVMCGKYKEALDLFREM------QLPKPNEAFVRPNEFTMST-VLSACGRLGALEQ 217
Query: 226 GK--HDLVQAYNT---------LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
GK H + Y+ LI Y + G +E A+R+F+ + + +++
Sbjct: 218 GKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS------------KKD 265
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNT-----MISGYVQISDMEEASKLF 329
V ++++M+ C G +LF M D N+ ++ V + E F
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 330 KEM-----PSPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAG 377
K M +P + ++ + + G +K A+ F MP + +++ W SL++G
Sbjct: 326 KMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 136/329 (41%), Gaps = 58/329 (17%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
G L A+ FD ++ WN++++ + K I AR+LFDEMP+R+++SW+ +I+GY
Sbjct: 111 GDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYV 170
Query: 110 SCCGSKFVEEGRKLFDEM----PERDCVSWN-----TVISGYAKNGRMDQALKLFDAMPE 160
C K E LF EM P V N TV+S + G ++Q K A +
Sbjct: 171 MCGKYK---EALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYID 226
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLEC 220
+ V ++D +G +ALI + G L+ A +
Sbjct: 227 KYHV-------------EIDIVLG-------------TALIDMYAKCGSLERAKRVFNAL 260
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
G + V+AY+ +I G +E +LF + N V++
Sbjct: 261 GSKKD-----VKAYSAMICCLAMYGLTDECFQLFSEMTTSDN--------INPNSVTFVG 307
Query: 281 MMMCYVKVGDIVSARELFDSMGER-----DTCAWNTMISGYVQISDMEEASKLFKEMP-S 334
++ V G I + F M E + M+ Y + ++EA MP
Sbjct: 308 ILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME 367
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERM 363
PD L W S++SG +GD+K + +R+
Sbjct: 368 PDVLIWGSLLSGSRMLGDIKTCEGALKRL 396
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 35/296 (11%)
Query: 29 NDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQ 88
+D+ S L WN ++ + G + +AR FD M RN ++W+ LI+G+V + +A
Sbjct: 121 DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD 180
Query: 89 LFDEM----PQRDIVSWN-LIISGYFSCCGS-KFVEEGRKLFDEMP----ERDCVSWNTV 138
LF EM P V N +S S CG +E+G+ + + E D V +
Sbjct: 181 LFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTAL 240
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSS-NAVITGFLLNGDVDSAVGFFKRMPECD---- 193
I YAK G +++A ++F+A+ + V + +A+I + G D F M D
Sbjct: 241 IDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINP 300
Query: 194 -SASLSALISGLVRNGELDMAAG---ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
S + ++ V G ++ +++E + G +Q Y ++ YG+SG ++E
Sbjct: 301 NSVTFVGILGACVHRGLINEGKSYFKMMIE----EFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERD 305
A +P + +V+ W S++ +GDI + + E D
Sbjct: 357 AESFIASMPMEP------------DVLIWGSLLSGSRMLGDIKTCEGALKRLIELD 400
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 42/256 (16%)
Query: 371 WNSLIAGYDKN---EDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ 427
WN +I N I ++ +M+ PD HT +L + L LG++ H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 428 LV----------TKTVI----------------------PDLPINNSLITMYSRCGAIGE 455
+ +T + DLP NS++ Y++ G I +
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 456 ACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-----IHPTYITFISV 510
A +F+EM ++VI+W+ +I GY G +AL+LF++M+ K + P T +V
Sbjct: 147 ARKLFDEMP-ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
L+AC G +E+G + ++ I+ Y +E + + +D+ + G L+ A + N++ K
Sbjct: 206 LSACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKK 264
Query: 571 DKAVWGALLGSCRVHG 586
D + A++ ++G
Sbjct: 265 DVKAYSAMICCLAMYG 280
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 157/355 (44%), Gaps = 36/355 (10%)
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
++D ++++ Y+ G + A ++FD ++ + N+V+ + G +D A F
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 189 MPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQ----AYNTLIAGYGQS 244
MPE + S S LI+G V G+ A + E + V+ +T+++ G+
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREM-QLPKPNEAFVRPNEFTMSTVLSACGRL 212
Query: 245 GKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG-E 303
G +E+ + + I D ++V +++ Y K G + A+ +F+++G +
Sbjct: 213 GALEQGKWVHAYI---------DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 304 RDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNS-----IISGFAQIGDLKVAKD 358
+D A++ MI +E +LF EM + D ++ NS I+ G + K
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 359 FFERMPQKNLIS-----WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
+F+ M ++ I+ + ++ Y ++ K A + M +E PD S+LS
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME---PDVLIWGSLLSGS 380
Query: 414 TGLVDLYLGKQMHQLVTKTVIPDLPINNS----LITMYSRCGAIGEACTVFNEMK 464
L D+ + + K +I P+N+ L +Y++ G E + +EM+
Sbjct: 381 RMLGDI----KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 273/545 (50%), Gaps = 54/545 (9%)
Query: 118 EEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG 177
E R + P R+ VSW ++ISG A+NG AL F M V ++
Sbjct: 59 ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCA---- 114
Query: 178 DVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
FK + ASL ++G + L + G +L+ G A++
Sbjct: 115 --------FKAV-----ASLRLPVTGKQIHA-LAVKCGRILDVFVG-------CSAFDM- 152
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
Y ++ ++AR+LFD IP RN+ +WN+ + V G A E
Sbjct: 153 ---YCKTRLRDDARKLFDEIP-------------ERNLETWNAFISNSVTDGRPREAIEA 196
Query: 298 FDSMGERDT-------CAWNTMISGYVQIS-DMEEASKLFKEMPSPDALSWNSIISGFAQ 349
F D CA+ S ++ ++ M+ + + D N +I + +
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 256
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
++ ++ F M KN +SW SL+A Y +N + + A L+ + + + + +SSV
Sbjct: 257 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSV 316
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
LS C G+ L LG+ +H K + + + ++L+ MY +CG I ++ F+EM K+
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKN 375
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT--YITFISVLNACAHAGLVEEGRRQ 526
++T N++IGGYA G AL LF++M PT Y+TF+S+L+AC+ AG VE G +
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG 586
F+SM + YGIEP EH++ VD+LGR G ++ A + I MP++P +VWGAL +CR+HG
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Query: 587 NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
+L +AA+ L L+P+ SG +VLL N +A W +A VR ++ +KK GYSW+
Sbjct: 496 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Query: 647 DSSNR 651
N+
Sbjct: 556 TVKNQ 560
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 5/250 (2%)
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
P P L+ N +I+ ++++ + A+ P +N++SW SLI+G +N + A+ F
Sbjct: 39 PPPPFLA-NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFF 97
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCG 451
+M+ EG P+ T L GKQ+H L K I D+ + S MY +
Sbjct: 98 EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVL 511
+A +F+E+ +++ TWNA I + G +A+E F + +R+ HP ITF + L
Sbjct: 158 LRDDARKLFDEIP-ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 512 NACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPD 571
NAC+ + G Q + ++ G + V +D G+ Q++ + + M K +
Sbjct: 217 NACSDWLHLNLG-MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK-N 274
Query: 572 KAVWGALLGS 581
W +L+ +
Sbjct: 275 AVSWCSLVAA 284
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 178/454 (39%), Gaps = 44/454 (9%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS 114
AR RN V+W +LISG + + A F EM + +V + F S
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 115 KFVEEGRKLFDEMPER-----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAV 169
+ K + + D + Y K D A KLFD +PERN + NA
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAF 180
Query: 170 ITGFLLNGDVDSAVGFFKRMPECD----SASLSALISGLVRNGELDMAA---GILLECG- 221
I+ + +G A+ F D S + A ++ L++ G++L G
Sbjct: 181 ISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGF 240
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
D D V N LI YG+ ++ + +F + +N VSW S+
Sbjct: 241 DTD------VSVCNGLIDFYGKCKQIRSSEIIFTEMGT-------------KNAVSWCSL 281
Query: 282 MMCYVKVGDIVSARELF----DSMGERDTCAWNTMISGYVQISDMEEASKL----FKEMP 333
+ YV+ + A L+ + E ++++S ++ +E + K
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
++++ + + G ++ ++ F+ MP+KNL++ NSLI GY A+ LF +
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 394 MQLE--GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSR 449
M G P+ T S+LS C+ + G ++ + T + P + ++ M R
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
G + A +M + W A+ HG
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 44/346 (12%)
Query: 54 EARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG 113
+AR FD + RN TWN IS V +A + F E + D ++ + + C
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Query: 114 SKF-VEEGRKL--------FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV 164
+ G +L FD D N +I Y K ++ + +F M +NAV
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDT----DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAV 276
Query: 165 SSNAVITGFLLNGDVDSAVGFFKR----MPECDSASLSALISGLVRNGELDMAAGILLEC 220
S +++ ++ N + + A + R + E +S+++S L++ I
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHA 336
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
+ V + L+ YG+ G +E++ + FD +P +N+V+ NS
Sbjct: 337 VKACVERTIFVGS--ALVDMYGKCGCIEDSEQAFDEMP-------------EKNLVTRNS 381
Query: 281 MMMCYVKVGDIVSARELFDSMGER------DTCAWNTMISGYVQISDMEEASKLFKEMPS 334
++ Y G + A LF+ M R + + +++S + +E K+F M S
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 335 -----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-WNSL 374
P A ++ I+ + G ++ A +F ++MP + IS W +L
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR---DIVSWNLI 104
+ G + ++ FD M +N VT N+LI G+ + ++ A LF+EM R ++
Sbjct: 357 KCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTF 416
Query: 105 ISGYFSCCGSKFVEEGRKLFDEMP-----ERDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
+S +C + VE G K+FD M E ++ ++ + G +++A + MP
Sbjct: 417 VSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMP 476
Query: 160 ERNAVS 165
+ +S
Sbjct: 477 IQPTIS 482
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 267/561 (47%), Gaps = 88/561 (15%)
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
+ WN +I+ YAKN ++ + + M + + D + K E
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKG------------IRPDAFTYPSVLKACGET 157
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
+ ++ G + E+ L C N LI+ Y + + ARR
Sbjct: 158 LDVAFGRVVHGSI---EVSSYKSSLYVC--------------NALISMYKRFRNMGIARR 200
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCA 308
LFDR+ F R+ VSWN+++ CY G A ELFD M E
Sbjct: 201 LFDRM-------------FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVIT 247
Query: 309 WNTMISGYVQISDMEEASKLFKEMPS-PDALS---------------------------- 339
WN + G +Q + A L M + P +L
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 340 ----------WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
N++I+ +++ DL+ A F + + +L +WNS+I+GY + + A
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASH 367
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPIN-NSLITMY 447
L +M + G +P+ TL+S+L +C + +L GK+ H ++ + D + NSL+ +Y
Sbjct: 368 LLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVY 427
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
++ G I A V + M +D +T+ ++I GY + G AL LFK+M R I P ++T
Sbjct: 428 AKSGKIVAAKQVSDLMS-KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTV 486
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
++VL+AC+H+ LV EG R F M +YGI P ++HF+ VD+ GR G L +A D+I++MP
Sbjct: 487 VAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAER 627
KP A W LL +C +HGN ++ + AA+ L+ ++PE+ G YVL+ NMYA W
Sbjct: 547 YKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAE 606
Query: 628 VRVLMEEKNVKKQTGYSWVDS 648
VR +M + VKK G +W+D+
Sbjct: 607 VRTIMRDLGVKKDPGCAWIDT 627
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 198/458 (43%), Gaps = 81/458 (17%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM--- 127
N LIS + + R + AR+LFD M +RD VSWN +I+ Y S E +LFD+M
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYAS---EGMWSEAFELFDKMWFS 239
Query: 128 -PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS---NAVITGFLLNGDVDSAV 183
E ++WN + G + G AL L M RN +S A+I G S +
Sbjct: 240 GVEVSVITWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIGL----KACSLI 293
Query: 184 GFFKRMPECDSASLSALISGL--VRNGELDMAAGILLECGDGDEGKHDLVQ--------- 232
G + E ++ + G+ VRN + M + +C D +H L+
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYS----KCKD---LRHALIVFRQTEENSL 346
Query: 233 -AYNTLIAGYGQSGKVEEARRLF----------------------DRIPNDQGDGKEDG- 268
+N++I+GY Q K EEA L RI N Q GKE
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ-HGKEFHC 405
Query: 269 ---RR--FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDME 323
RR F+ + WNS++ Y K G IV+A+++ D M +RD + ++I GY +
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 324 EASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP-----QKNLISWNSL 374
A LFKEM PD ++ +++S + + + F +M + L ++ +
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI 434
+ Y + A ++ M KP T +++L+ C + +GK + + + +
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMPY---KPSGATWATLLNACHIHGNTQIGKWAAEKLLE-MK 581
Query: 435 PDLPINNSLIT-MYSRCGA---IGEACTVFNEMKFYKD 468
P+ P LI MY+ G+ + E T+ ++ KD
Sbjct: 582 PENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 12/194 (6%)
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
A+ E + + WN LIA Y KNE ++ I + +M +G +PD T SVL C
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 416 LVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
+D+ G+ +H + + L + N+LI+MY R +G A +F+ M F +D ++WNA
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNA 215
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
+I YAS G+ +A ELF +M + + IT+ + C G + +
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG----------NYVGAL 265
Query: 535 GIEPRVEHFASFVD 548
G+ R+ +F + +D
Sbjct: 266 GLISRMRNFPTSLD 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ + L A F + + TWN++ISG+ + + +A L EM
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 100 SWNLIISGYFSCCGS-KFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRMDQALK 153
++ ++ C ++ G++ + R C WN+++ YAK+G++ A +
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISG-----L 204
+ D M +R+ V+ ++I G+ G+ A+ FK M D ++ A++S L
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKL 498
Query: 205 VRNGE-LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
V GE L M ++C + G +Q ++ ++ YG++G + +A+ + +P
Sbjct: 499 VHEGERLFMK----MQC---EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMP 546
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN + ++G++ A+ D M R+ VT+ +LI G+ + E A LF EM + I
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 99 VSWNLIISGYFSCCG-SKFVEEGRKLFDEMP----ERDCVS-WNTVISGYAKNGRMDQAL 152
++ + S C SK V EG +LF +M R C+ ++ ++ Y + G + +A
Sbjct: 480 KPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAK 539
Query: 153 KLFDAMPER 161
+ MP +
Sbjct: 540 DIIHNMPYK 548
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 195/731 (26%), Positives = 343/731 (46%), Gaps = 132/731 (18%)
Query: 42 KISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR----- 96
++S + + G AR FD++ TV WNT+I G + +A + M +
Sbjct: 45 RLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTN 104
Query: 97 -DIVSW-----------------------------------NLIISGYFSCCGSKFVEEG 120
D ++ N +++ Y SC + E
Sbjct: 105 CDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEY 164
Query: 121 ---RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVITGF 173
RK+FD M ++ V+WNT+IS Y K GR +A + F M + + VS V
Sbjct: 165 DVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAV 224
Query: 174 LLNGDVDSAVGFFKRMPEC------DSASLSALISGLVRNGELDMAAGILLECGDGDEGK 227
++ + A F+ M + D +S+ IS G+++ + + C + +
Sbjct: 225 SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN--- 281
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLF------DRIPNDQG------------DGKEDGR 269
++ +NT+I Y Q+ + E+ LF I +D+ E GR
Sbjct: 282 ---IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 270 RFR----RN-----VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQIS 320
+F +N +V NS+M+ Y + G + + +F SM ERD +WNTMIS +VQ
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 321 DMEEASKLFKEMPSP----DALSWNSIISG------------------------------ 346
+E L EM D ++ +++S
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY 458
Query: 347 ----FAQIGDLKVAKDFFER--MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
+++ G +++++ FE +++ +WNS+I+GY +N + +F +M + +
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTV 459
P+ T++S+L C+ + + LGKQ+H + + ++ + ++L+ MYS+ GAI A +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F++ K ++ +T+ MI GY HG+ A+ LF M+ I P ITF++VL+AC+++GL
Sbjct: 579 FSQTK-ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA-VWGAL 578
++EG + F M Y I+P EH+ D+LGR G++ EA + + + + + A +WG+L
Sbjct: 638 IDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSL 697
Query: 579 LGSCRVHGNVELAQVAAQALISLEPES--SGPYVLLYNMYANLELWDDAERVRVLMEEKN 636
LGSC++HG +ELA+ ++ L + SG VLL NMYA + W ++VR M EK
Sbjct: 698 LGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKG 757
Query: 637 VKKQTGYSWVD 647
+KK+ G S ++
Sbjct: 758 LKKEVGRSGIE 768
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 228/541 (42%), Gaps = 113/541 (20%)
Query: 39 WNKKISHLIRTGRLSEA-RTFFDSMKHR---NTVTWNTLISGHVKRREIAKARQLFDEMP 94
WN IS ++TGR +EA R F M+ + V++ + R I KA + M
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 95 Q------RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRM 148
+ +D+ + IS Y +E R++FD ER+ WNT+I Y +N +
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGD---IESSRRVFDSCVERNIEVWNTMIGVYVQNDCL 298
Query: 149 DQALKLF-DAMPERNAVSSNAVITGFLLNGDVDSAV----------GF----FKRMPECD 193
++++LF +A+ + VS +LL SA+ GF F+ +P
Sbjct: 299 VESIELFLEAIGSKEIVSDEVT---YLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 194 SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRL 253
SL + S R G + + G+ L + D V ++NT+I+ + Q+G +E L
Sbjct: 356 VNSLMVMYS---RCGSVHKSFGVFLSMRERD------VVSWNTMISAFVQNGLDDEGLML 406
Query: 254 ----------FDRIP-----------NDQGDGKEDGRRFRRNVVSWNSM----MMCYVKV 288
D I ++ GK+ R + + M + Y K
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Query: 289 GDIVSARELFDSMG--ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNS 342
G I +++LF+ G ERD WN+MISGY Q E+ +F++M P+A++ S
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVAS 526
Query: 343 IISGFAQIGD-----------------------------------LKVAKDFFERMPQKN 367
I+ +QIG +K A+D F + ++N
Sbjct: 527 ILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERN 586
Query: 368 LISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVD--LYLGK 423
+++ ++I GY ++ + AI LF MQ G KPD T +VLS C +GL+D L + +
Sbjct: 587 SVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFE 646
Query: 424 QMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT-WNAMIGGYASH 482
+M ++ + P + M R G + EA + ++ W +++G H
Sbjct: 647 EMREVY--NIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLH 704
Query: 483 G 483
G
Sbjct: 705 G 705
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 273/558 (48%), Gaps = 56/558 (10%)
Query: 138 VISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF----------- 186
+IS Y + R QAL +FD + RNA S NA++ + A F
Sbjct: 63 LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSS 122
Query: 187 --------------KRMPECDS---ASLSALISGLVRNGELD----MAAGILL---ECGD 222
K + CD SL+ + G V G D + G++ +C +
Sbjct: 123 DAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDN 182
Query: 223 -------GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
DE V ++N++I+GY QSG E+ ++++ + F+ N
Sbjct: 183 IESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLA--------CSDFKPNG 234
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKE 331
V+ S+ + D++ E+ M E D N +I Y + ++ A LF E
Sbjct: 235 VTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDE 294
Query: 332 MPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELF 391
M D++++ +IISG+ G +K A F M L +WN++I+G +N ++ I F
Sbjct: 295 MSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSF 354
Query: 392 SQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRC 450
+M G +P+ TLSS+L T +L GK++H + ++ + S+I Y++
Sbjct: 355 REMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKL 414
Query: 451 GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISV 510
G + A VF+ K + +I W A+I YA HG + A LF QM+ L P +T +V
Sbjct: 415 GFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
L+A AH+G + + F+SM+ Y IEP VEH+A V +L R G+L +AM+ I+ MP+ P
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 571 DKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
VWGALL V G++E+A+ A L +EPE++G Y ++ N+Y W++AE VR
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 631 LMEEKNVKKQTGYSWVDS 648
M+ +KK G SW+++
Sbjct: 594 KMKRIGLKKIPGTSWIET 611
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 200/458 (43%), Gaps = 70/458 (15%)
Query: 56 RTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY------- 108
R FDS + N +I+ + K I AR++FDEM +RD+VSWN +ISGY
Sbjct: 160 RGGFDS----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFE 215
Query: 109 -------------------------FSCCGSKF-----VEEGRKLFDEMPERDCVSWNTV 138
F CG +E +K+ + + D N V
Sbjct: 216 DCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 139 ISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLS 198
I YAK G +D A LFD M E+++V+ A+I+G++ +G V A+ F M ++ +
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 199 ALISGLVRNG---ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
A+ISGL++N E+ + ++ CG ++L+ S ++ + +
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPN-----TVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISG 315
+ D N+ S++ Y K+G ++ A+ +FD+ +R AW +I+
Sbjct: 391 FAIRNGAD---------NNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITA 441
Query: 316 YVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS- 370
Y D + A LF +M PD ++ +++S FA GD +A+ F+ M K I
Sbjct: 442 YAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEP 501
Query: 371 ----WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
+ +++ + A+E S+M ++ P ++L+ + L DL + +
Sbjct: 502 GVEHYACMVSVLSRAGKLSDAMEFISKMPID---PIAKVWGALLNGASVLGDLEIARFAC 558
Query: 427 QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK 464
+ + + + +Y++ G EA V N+MK
Sbjct: 559 DRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMK 596
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 19/284 (6%)
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELF--- 391
PD + +IS + + + A F+ + +N S+N+L+ Y E Y A LF
Sbjct: 55 PDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSW 114
Query: 392 ---SQMQLEGEKPDRHTLSSVLSVCTGLVDLYLG---KQMHQLVTKTVI-PDLPINNSLI 444
S + +PD ++S VL +G D +LG +Q+H V + D+ + N +I
Sbjct: 115 IGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMI 174
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHPT 503
T Y++C I A VF+EM +DV++WN+MI GY+ G D +++K M P
Sbjct: 175 TYYTKCDNIESARKVFDEMS-ERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPN 233
Query: 504 YITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI 563
+T ISV AC + + G MI ++ I+ + + + + G L A L
Sbjct: 234 GVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 564 NSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG 607
+ M K D +GA++ HG V+ A AL S E ES G
Sbjct: 293 DEMSEK-DSVTYGAIISGYMAHGLVK----EAMALFS-EMESIG 330
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 157/568 (27%), Positives = 288/568 (50%), Gaps = 55/568 (9%)
Query: 93 MPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQAL 152
MP D+++ Y + GS+ + + F ++P R V + G +K+ ++D+A+
Sbjct: 64 MPSLDVIT----PQAYLTPLGSQSINHAK--FLQIPWRQFVFTKPL--GLSKSTKLDEAV 115
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
L + + S PE + L A IS + + +
Sbjct: 116 TLIENSSSSPSNLST----------------------PEAYTDLLHACISAKSLHHGIKI 153
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
+ IL + +H+ + + LI + +++ AR++FD + D
Sbjct: 154 CSLIL----NNPSLRHN-PKLLSKLITLFSVCRRLDLARKIFDDV--------TDSSLLT 200
Query: 273 RNVVSWNSMMMCYVKVGD----IVSARELFDSMGERDTCAWNTMISGYVQISDMEEA--- 325
V W +M + Y + G ++ ++ S E + + + V + D+
Sbjct: 201 EKV--WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGI 258
Query: 326 -SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDY 384
+++ K D + +N ++ + + G A+ F+ M ++N+++WNSLI+ K
Sbjct: 259 HAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRV 318
Query: 385 KGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSL 443
LF +MQ E TL+++L C+ + L GK++H Q++ PD+P+ NSL
Sbjct: 319 HEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSL 378
Query: 444 ITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT 503
+ MY +CG + + VF+ M KD+ +WN M+ YA +G + + LF+ M + P
Sbjct: 379 MDMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 437
Query: 504 YITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI 563
ITF+++L+ C+ GL E G F M ++ + P +EH+A VDILGR G+++EA+ +I
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
Query: 564 NSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWD 623
+MP KP ++WG+LL SCR+HGNV + ++AA+ L LEP + G YV++ N+YA+ ++WD
Sbjct: 498 ETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWD 557
Query: 624 DAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+ +++R +M+++ VKK+ G SWV ++
Sbjct: 558 NVDKIREMMKQRGVKKEAGCSWVQVKDK 585
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%), Gaps = 28/274 (10%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
+N + + +G +AR FD M RN VTWN+LIS K+ + + LF +M + I
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI 333
Query: 99 -VSWNLIISGYFSCCGSKFVEEGRKLFDEM----PERDCVSWNTVISGYAKNGRMDQALK 153
SW + + +C + G+++ ++ + D N+++ Y K G ++ + +
Sbjct: 334 GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRR 393
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGE 209
+FD M ++ S N ++ + +NG+++ + F+ M E D + AL+SG G
Sbjct: 394 VFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGL 453
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
+ L E + ++ Y L+ G++GK++EA ++ + +P
Sbjct: 454 TEYGLS-LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMP----------- 501
Query: 270 RFRRNVVSWNSMM-MCY----VKVGDIVSARELF 298
F+ + W S++ C V VG+I +A+ELF
Sbjct: 502 -FKPSASIWGSLLNSCRLHGNVSVGEI-AAKELF 533
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 174/631 (27%), Positives = 316/631 (50%), Gaps = 43/631 (6%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHR-NTVTWNTLISGHVKRREIAKARQLFDEM----P 94
N +S + LS AR FD + + + V WN+++S + + + +LF EM P
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRMD 149
+ + I+S +C G + + G+++ + + S N +I+ Y + G+M
Sbjct: 281 APNSYT---IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLV 205
QA ++ M + V+ N++I G++ N A+ FF M + D S++++I+
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA-- 395
Query: 206 RNGEL-DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
+G L ++ AG+ L G +Q NTLI Y + R F R+ +
Sbjct: 396 -SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD----- 449
Query: 265 KEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEE 324
++++SW +++ Y + V A ELF + ++ ++ ++ S + +
Sbjct: 450 --------KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501
Query: 325 ASKLFKEMPSP-------DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAG 377
+ + KE+ D + N ++ + + ++ A FE + K+++SW S+I+
Sbjct: 502 SMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 378 YDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPD 436
N + A+ELF +M G D L +LS L L G+++H L+ K +
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
I +++ MY+ CG + A VF+ ++ K ++ + +MI Y HG A+ELF +M+
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYTSMINAYGMHGCGKAAVELFDKMR 680
Query: 497 RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQL 556
+ P +I+F+++L AC+HAGL++EGR M ++Y +EP EH+ VD+LGR +
Sbjct: 681 HENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCV 740
Query: 557 QEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMY 616
EA + + M +P VW ALL +CR H E+ ++AAQ L+ LEP++ G VL+ N++
Sbjct: 741 VEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVF 800
Query: 617 ANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
A W+D E+VR M+ ++K G SW++
Sbjct: 801 AEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 153/622 (24%), Positives = 264/622 (42%), Gaps = 125/622 (20%)
Query: 79 KRREIAKARQL----FDEMP--QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC 132
KRR +++ RQL F P + D ++ L+ + CGS +++ K+FDEMP+R
Sbjct: 92 KRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVF--MYGKCGS--LDDAEKVFDEMPDRTA 147
Query: 133 VSWNTVISGYAKNGRMDQALKLF-----DAMPERNAVSSNAVITGFLLNGDVDSAVGFFK 187
+WNT+I Y NG AL L+ + +P S A++ D+ S
Sbjct: 148 FAWNTMIGAYVSNGEPASALALYWNMRVEGVP-LGLSSFPALLKACAKLRDIRSGSELHS 206
Query: 188 RMPECDSAS----LSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQ 243
+ + S ++AL+S +N +L A + DG + K D V +N++++ Y
Sbjct: 207 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF----DGFQEKGDAV-LWNSILSSYST 261
Query: 244 SGKVEEARRLFDRI------PNDQG--------DG---KEDGRRFRRNVVS--------- 277
SGK E LF + PN DG + G+ +V+
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 278 -WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP- 335
N+++ Y + G + A + M D WN++I GYVQ +EA + F +M +
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 336 ---DALSWNSIISGFAQIGDLKVAKDF--------------------------------- 359
D +S SII+ ++ +L +
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG 441
Query: 360 --FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
F RM K+LISW ++IAGY +N+ + A+ELF + + + D L S+L + L
Sbjct: 442 RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLK 501
Query: 418 DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
+ + K++H + + + D I N L+ +Y +C +G A VF +K KDV++W +MI
Sbjct: 502 SMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKG-KDVVSWTSMIS 560
Query: 478 GYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI------ 531
A +G +A+ELF++M + + + +L+A A + +GR ++
Sbjct: 561 SSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCL 620
Query: 532 -------------------NDYGIEPRVE-----HFASFVDILGRQGQLQEAMDLINSM- 566
+ + R+E + S ++ G G + A++L + M
Sbjct: 621 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMR 680
Query: 567 --PVKPDKAVWGALLGSCRVHG 586
V PD + ALL +C G
Sbjct: 681 HENVSPDHISFLALLYACSHAG 702
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/505 (23%), Positives = 199/505 (39%), Gaps = 99/505 (19%)
Query: 29 NDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQ 88
+ SS L+ N I+ R G++ +A M + + VTWN+LI G+V+ +A +
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 89 LF----------DEMPQRDIVS----------------------W-------NLIISGYF 109
F DE+ I++ W N +I Y
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYS 432
Query: 110 SCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAV 169
C + ++ GR F M ++D +SW TVI+GYA+N +AL+LF + ++ +
Sbjct: 433 KCNLTCYM--GRA-FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 170 ITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
+ L V ++ K + C ++R G LD
Sbjct: 490 LGSILRASSVLKSMLIVKEI-HCH----------ILRKGLLD-----------------T 521
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
++Q N L+ YG+ + A R+F+ I ++VVSW SM+ G
Sbjct: 522 VIQ--NELVDVYGKCRNMGYATRVFESIKG-------------KDVVSWTSMISSSALNG 566
Query: 290 DIVSARELFDSMGERD--------TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWN 341
+ A ELF M E C + S E L ++ +
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
+++ +A GDL+ AK F+R+ +K L+ + S+I Y + K A+ELF +M+ E P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 402 DRHTLSSVLSVCT--GLVDLYLG--KQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
D + ++L C+ GL+D G K M P+ + L+ M R + EA
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV--CLVDMLGRANCVVEAF 744
Query: 458 TVFNEMKFYKDVITWNAMIGGYASH 482
MK W A++ SH
Sbjct: 745 EFVKMMKTEPTAEVWCALLAACRSH 769
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 220/404 (54%), Gaps = 43/404 (10%)
Query: 286 VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWN 341
V +GD+ AR++FD M + WNT+ GYV+ E+ L+K+M PD ++
Sbjct: 54 VVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYP 113
Query: 342 SIISGFAQIGD-----------------------------------LKVAKDFFERMPQK 366
++ +Q+GD L A+ FE M K
Sbjct: 114 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK 173
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
+L++WN+ +A + + A+E F++M + + D T+ S+LS C L L +G++++
Sbjct: 174 DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
Query: 427 QLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
K I ++ + N+ + M+ +CG A +F EMK ++V++W+ MI GYA +G +
Sbjct: 234 DRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMIVGYAMNGDS 292
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI--NDYGIEPRVEHF 543
+AL LF M+ + P Y+TF+ VL+AC+HAGLV EG+R F+ M+ ND +EPR EH+
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 544 ASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEP 603
A VD+LGR G L+EA + I MPV+PD +WGALLG+C VH ++ L Q A L+ P
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAP 412
Query: 604 ESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ +VLL N+YA WD ++VR M + KK YS V+
Sbjct: 413 DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVE 456
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 58/377 (15%)
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
R++FDEM + WNT+ GY +N ++L L+ M +
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRP-------------- 107
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
D + ++ + + G D + G L G L L+
Sbjct: 108 -------------DEFTYPFVVKAISQLG--DFSCGFALHAHVVKYGFGCLGIVATELVM 152
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
Y + G++ A LF+ + +++V+WN+ + V+ G+ A E F+
Sbjct: 153 MYMKFGELSSAEFLFESMQ-------------VKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 300 SMG----ERDTCAWNTMISGYVQISDMEEASKLF----KEMPSPDALSWNSIISGFAQIG 351
M + D+ +M+S Q+ +E +++ KE + + N+ + + G
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ + A+ FE M Q+N++SW+++I GY N D + A+ LF+ MQ EG +P+ T VLS
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 412 VCT--GLVDLYLGKQMHQLVT----KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
C+ GLV+ GK+ L+ K + P ++ + R G + EA +M
Sbjct: 320 ACSHAGLVN--EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 466 YKDVITWNAMIGGYASH 482
D W A++G A H
Sbjct: 378 EPDTGIWGALLGACAVH 394
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 186/441 (42%), Gaps = 74/441 (16%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
++SLL Q + +L+ G + AR FD M WNTL G+V+ + ++ L+
Sbjct: 42 KNSLLTQL---LENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYK 98
Query: 92 EM----PQRDIVSWNLIIS-----GYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGY 142
+M + D ++ ++ G FSC + + F + + ++ Y
Sbjct: 99 KMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG----IVATELVMMY 154
Query: 143 AKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALIS 202
K G + A LF++M ++ V+ NA + + G+ A+ +F +M
Sbjct: 155 MKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM------------- 201
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
C D + V ++++ GQ G +E ++DR ++
Sbjct: 202 -----------------CADAVQFDSFTVV---SMLSACGQLGSLEIGEEIYDRARKEEI 241
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
D N++ N+ + ++K G+ +AR LF+ M +R+ +W+TMI GY D
Sbjct: 242 DC---------NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS 292
Query: 323 EEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGY 378
EA LF M + P+ +++ ++S + G + K +F M Q N + Y
Sbjct: 293 REALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHY 352
Query: 379 DKNEDYKG-------AIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK 431
D G A E +M +E PD ++L C D+ LG+++ ++ +
Sbjct: 353 ACMVDLLGRSGLLEEAYEFIKKMPVE---PDTGIWGALLGACAVHRDMILGQKVADVLVE 409
Query: 432 TVIPDLPINNSLIT-MYSRCG 451
T PD+ + L++ +Y+ G
Sbjct: 410 TA-PDIGSYHVLLSNIYAAAG 429
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 2/189 (1%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
++ IGD+ A+ F+ M + + WN+L GY +N+ ++ L+ +M+ G +
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPI-NNSLITMYSRCGAIGEACTV 459
PD T V+ + L D G +H V K L I L+ MY + G + A +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F M+ KD++ WNA + G + ALE F +M + T +S+L+AC G
Sbjct: 167 FESMQV-KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGS 225
Query: 520 VEEGRRQFN 528
+E G ++
Sbjct: 226 LEIGEEIYD 234
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 274/558 (49%), Gaps = 60/558 (10%)
Query: 102 NLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
N ++S YF + E R++FD +D +SW +++SGY +AL++F M
Sbjct: 100 NSLLSLYFKL--GPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM--- 154
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG 221
F L+ + + K E L G+V
Sbjct: 155 ---------VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVIT-------------- 191
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
G E H + +TL YG + + +ARR+FD +P +V+ W ++
Sbjct: 192 HGFEWNHFIS---STLAYLYGVNREPVDARRVFDEMPEP-------------DVICWTAV 235
Query: 282 MMCYVKVGDIVSARELFDSMGE-----RDTCAWNTMISGYVQISDMEEA----SKLFKEM 332
+ + K A LF +M D + T+++ + +++ KL
Sbjct: 236 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 295
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
+ + +S++ + + G ++ A+ F M +KN +SW++L+ GY +N +++ AIE+F
Sbjct: 296 IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCG 451
+M E+ D + +VL C GL + LGK++H Q V + ++ + ++LI +Y + G
Sbjct: 356 EM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSG 411
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVL 511
I A V+++M +++ITWNAM+ A +G +A+ F M + I P YI+FI++L
Sbjct: 412 CIDSASRVYSKMSI-RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 512 NACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPD 571
AC H G+V+EGR F M YGI+P EH++ +D+LGR G +EA +L+ + D
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRND 530
Query: 572 KAVWGALLGSCRVHGNV-ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
++WG LLG C + + +A+ A+ ++ LEP+ YVLL NMY + DA +R
Sbjct: 531 ASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRK 590
Query: 631 LMEEKNVKKQTGYSWVDS 648
LM + V K G SW+D+
Sbjct: 591 LMVRRGVAKTVGQSWIDA 608
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/519 (22%), Positives = 228/519 (43%), Gaps = 100/519 (19%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
+ E R FD ++ ++W +++SG+V +E KA ++F EM + + +S
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 112 CG----------------------SKFVE--------------EGRKLFDEMPERDCVSW 135
C + F+ + R++FDEMPE D + W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA 195
V+S ++KN ++AL LF AM + + G +L +A G +R+ +
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVL-----TACGNLRRLKQGKE- 286
Query: 196 SLSALISG-LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
I G L+ NG + + +++E ++L+ YG+ G V EAR++F
Sbjct: 287 -----IHGKLITNG---IGSNVVVE---------------SSLLDMYGKCGSVREARQVF 323
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
+ + ++N VSW++++ Y + G+ A E+F M E+D + T++
Sbjct: 324 NGMS-------------KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLK 370
Query: 315 GYVQISDMEEASKLFKEMPSP--------DALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
++ A +L KE+ + + +++I + + G + A + +M +
Sbjct: 371 ACAGLA----AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR 426
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQ 424
N+I+WN++++ +N + A+ F+ M +G KPD + ++L+ C TG+VD G+
Sbjct: 427 NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD--EGRN 484
Query: 425 MHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
L+ K+ + P + +I + R G EA + + D W ++G A++
Sbjct: 485 YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAAN 544
Query: 483 GLAVDALE-LFKQMKRL--KIHPTYITFISVLNACAHAG 518
A E + K+M L K H +Y+ ++ A G
Sbjct: 545 ADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHG 583
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 113/233 (48%), Gaps = 19/233 (8%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
ESSLL + K G + EAR F+ M +N+V+W+ L+ G+ + E KA ++F
Sbjct: 303 ESSLLDMYGK-------CGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFR 355
Query: 92 EMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNGR 147
EM ++D+ + ++ +C G V G+++ + R C + + +I Y K+G
Sbjct: 356 EMEEKDLYCFGTVLK---ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGC 412
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF----KRMPECDSASLSALISG 203
+D A +++ M RN ++ NA+++ NG + AV FF K+ + D S A+++
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR 256
G +D + G + Y+ +I G++G EEA L +R
Sbjct: 473 CGHTGMVDEGRNYFVLMAK-SYGIKPGTEHYSCMIDLLGRAGLFEEAENLLER 524
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 245 bits (625), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 241/462 (52%), Gaps = 38/462 (8%)
Query: 193 DSASLSALISGLVRNGE---LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
D+ S S L++ N E + A IL G + H N++I Y S E
Sbjct: 70 DTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTH------NSVIRAYANSSTPEV 123
Query: 250 ARRLFDRI------PNDQGD-----------GKEDGRRFR---------RNVVSWNSMMM 283
A +F + P+ G E+GR+ +V N+++
Sbjct: 124 ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVN 183
Query: 284 CYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSI 343
Y + G AR++ D M RD +WN+++S Y++ ++EA LF EM + SWN +
Sbjct: 184 VYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFM 243
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG-EKPD 402
ISG+A G +K AK+ F+ MP ++++SWN+++ Y Y +E+F++M + EKPD
Sbjct: 244 ISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPD 303
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFN 461
TL SVLS C L L G+ +H + K I + + +L+ MYS+CG I +A VF
Sbjct: 304 GFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR 363
Query: 462 EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
+DV TWN++I + HGL DALE+F +M P ITFI VL+AC H G+++
Sbjct: 364 ATS-KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLD 422
Query: 522 EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
+ R+ F M + Y +EP +EH+ VD+LGR G+++EA +L+N +P + +LLG+
Sbjct: 423 QARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGA 482
Query: 582 CRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWD 623
C+ G +E A+ A L+ L S Y + N+YA+ W+
Sbjct: 483 CKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWE 524
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 197/451 (43%), Gaps = 72/451 (15%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM---PQ-RDIVSWNLIISG 107
+S A + + + N T N++I + A +F EM P D S+ ++
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 108 YFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
+ CG EEGR++ + D NT+++ Y ++G + A K+ D MP R+A
Sbjct: 150 CAAFCG---FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA 206
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDG 223
VS N++++ +L G VD A F M E RN
Sbjct: 207 VSWNSLLSAYLEKGLVDEARALFDEMEE--------------RN---------------- 236
Query: 224 DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMM 283
V+++N +I+GY +G V+EA+ +FD +P R+VVSWN+M+
Sbjct: 237 -------VESWNFMISGYAAAGLVKEAKEVFDSMP-------------VRDVVSWNAMVT 276
Query: 284 CYVKVGDIVSARELF-----DSMGERDTCAWNTMISGYVQISDMEEAS----KLFKEMPS 334
Y VG E+F DS + D +++S + + + + K
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE 336
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
+ +++ +++ G + A + F ++++ +WNS+I+ + K A+E+FS+M
Sbjct: 337 IEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
Query: 395 QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGA 452
EG KP+ T VLS C + L +++ ++++ V P + ++ + R G
Sbjct: 397 VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGK 456
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
I EA + NE+ + I +++G G
Sbjct: 457 IEEAEELVNEIPADEASILLESLLGACKRFG 487
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 164/337 (48%), Gaps = 35/337 (10%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
R+G AR D M R+ V+WN+L+S ++++ + +AR LFDEM +R++ SWN +ISG
Sbjct: 187 RSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISG 246
Query: 108 YFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN----- 162
Y + V+E +++FD MP RD VSWN +++ YA G ++ L++F+ M + +
Sbjct: 247 Y---AAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPD 303
Query: 163 -----AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGIL 217
+V S G L G+ V K E + +AL+ + G++D A +
Sbjct: 304 GFTLVSVLSACASLGSLSQGEW-VHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 218 LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
D V +N++I+ G ++A +F + + F+ N ++
Sbjct: 363 RATSKRD------VSTWNSIISDLSVHGLGKDALEIFSEMVYEG---------FKPNGIT 407
Query: 278 WNSMMMCYVKVGDIVSARELFDSMG-----ERDTCAWNTMISGYVQISDMEEASKLFKEM 332
+ ++ VG + AR+LF+ M E + M+ ++ +EEA +L E+
Sbjct: 408 FIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEI 467
Query: 333 PSPDA-LSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
P+ +A + S++ + G L+ A+ R+ + NL
Sbjct: 468 PADEASILLESLLGACKRFGQLEQAERIANRLLELNL 504
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 42/265 (15%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN +S + G + EAR FD M+ RN +WN +ISG+ + +A+++FD MP RD+
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 99 VSWNLIISGYFSC-CGSKFVEEGRKLFDEMPERD-----------CVSWNTVISG----- 141
VSWN +++ Y C ++ +E K+ D+ E+ C S ++ G
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 142 --------------------YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
Y+K G++D+AL++F A +R+ + N++I+ ++G
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKD 388
Query: 182 AVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
A+ F M + + + ++S G LD A L E ++ Y +
Sbjct: 389 ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARK-LFEMMSSVYRVEPTIEHYGCM 447
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQG 262
+ G+ GK+EEA L + IP D+
Sbjct: 448 VDLLGRMGKIEEAEELVNEIPADEA 472
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 172/573 (30%), Positives = 284/573 (49%), Gaps = 40/573 (6%)
Query: 110 SCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
SC V +GR L ++ + D + ++S Y K ++ ALK+ D MPER S
Sbjct: 40 SCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIAS 99
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDE 225
NA ++G L NG A F + ++++ V G D+ G+ L C
Sbjct: 100 VNAAVSGLLENGFCRDAFRMFGD-ARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKS 158
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ--------GDGKEDG--------- 268
G V +L++ Y + G+ A R+F+++P+ E+G
Sbjct: 159 GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF 218
Query: 269 ---RRFRR---NVVSWNSMMMCYVKVGDIVSARELFDSMGERD----TCAWNTMISGYVQ 318
R+F N V++ + + + ++ R+L + +++ T +I Y +
Sbjct: 219 NLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSK 278
Query: 319 ISDMEEASKLFKEMP-SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----ISWNS 373
+ A +F E+ + + +SWNS+ISG G + A + FE++ + L +WNS
Sbjct: 279 CRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNS 338
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTV 433
LI+G+ + A + F +M P L+S+LS C+ + L GK++H V K
Sbjct: 339 LISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAA 398
Query: 434 IP-DLPINNSLITMYSRCGAIGEACTVFNEMKFY-KDVITWNAMIGGYASHGLAVDALEL 491
D+ + SLI MY +CG A +F+ + KD + WN MI GY HG A+E+
Sbjct: 399 AERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEI 458
Query: 492 FKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILG 551
F+ ++ K+ P+ TF +VL+AC+H G VE+G + F M +YG +P EH +D+LG
Sbjct: 459 FELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLG 518
Query: 552 RQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVL 611
R G+L+EA ++I+ M +LLGSCR H + L + AA L LEPE+ P+V+
Sbjct: 519 RSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVI 577
Query: 612 LYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
L ++YA LE W+D E +R ++++K + K G S
Sbjct: 578 LSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 155/363 (42%), Gaps = 72/363 (19%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
+S R G A F+ + H++ VT+N ISG ++ + +F+ M + N
Sbjct: 171 VSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPN 230
Query: 103 --LIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFD 156
++ +C ++ GR+L + ++ + + +I Y+K A +F
Sbjct: 231 DVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFT 290
Query: 157 AMPE-RNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
+ + RN +S N+VI+G ++NG ++AV F+++ DS
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKL---DS--------------------- 326
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR------IPNDQ-------- 261
EG +N+LI+G+ Q GKV EA + F+R +P+ +
Sbjct: 327 ---------EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSA 377
Query: 262 -------GDGKE-DGRRFR----RNVVSWNSMMMCYVKVGDIVSARELFDSM--GERDTC 307
+GKE G + R++ S++ Y+K G AR +FD +D
Sbjct: 378 CSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPV 437
Query: 308 AWNTMISGYVQISDMEEASKLF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
WN MISGY + + E A ++F +E P ++ +++S + G+++ F M
Sbjct: 438 FWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLM 497
Query: 364 PQK 366
++
Sbjct: 498 QEE 500
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTV----TWNTLISGHVKRREIAKARQLFDEM- 93
WN IS + G++ EA FF+ M V +L+S + +++ +
Sbjct: 336 WNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVI 395
Query: 94 ---PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD--EMPERDCVSWNTVISGYAKNGRM 148
+RDI +I Y C S + R++FD E +D V WN +ISGY K+G
Sbjct: 396 KAAAERDIFVLTSLIDMYMKCGLSSW---ARRIFDRFEPKPKDPVFWNVMISGYGKHGEC 452
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLN----GDVDSAVGFFKRMPE-----CDSASLSA 199
+ A+++F+ + E S A T L G+V+ F+ M E + +
Sbjct: 453 ESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGC 512
Query: 200 LISGLVRNGELDMAAGIL 217
+I L R+G L A ++
Sbjct: 513 MIDLLGRSGRLREAKEVI 530
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 224/413 (54%), Gaps = 57/413 (13%)
Query: 290 DIVSARELFDSMGERDTCAWNTMISGYVQ-ISDMEEASKLFKEM-----PSPDALSW--- 340
D+ A +FDS+ + WNT+I +S EEA L+++M SPD ++
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 341 --------------------------------NSIISGFAQIGDLKVAKDFFERMPQKNL 368
N +I + G L +A+ F+ MP+++L
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 369 ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQL 428
+SWNS+I + +Y A++LF +MQ E PD +T+ SVLS C GL L LG H
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 429 VTKT----VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
+ + V D+ + NSLI MY +CG++ A VF M+ +D+ +WNAMI G+A+HG
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGR 335
Query: 485 AVDALELFKQM--KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
A +A+ F +M KR + P +TF+ +L AC H G V +GR+ F+ M+ DY IEP +EH
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH 395
Query: 543 FASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHG-NVELAQVAAQALISL 601
+ VD++ R G + EA+D++ SMP+KPD +W +LL +C G +VEL++ A+ +I
Sbjct: 396 YGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGT 455
Query: 602 EPES-------SGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+ ++ SG YVLL +YA+ W+D VR LM E ++K+ G S ++
Sbjct: 456 KEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIE 508
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 71/349 (20%)
Query: 59 FDSMKHRNTVTWNTLI---SGHVKRREIAKARQLFDEMPQR-----DIVSWNLIISGYFS 110
FDS+++ ++ WNTLI + V R+E +A L+ +M +R D ++ ++
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKE--EAFMLYRKMLERGESSPDKHTFPFVLKA--- 160
Query: 111 CCGSKF-VEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
C F EG+++ ++ + D N +I Y G +D A K+FD MPER+ VS
Sbjct: 161 -CAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVS 219
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMP---ECDSASLSALISG----------------LVR 206
N++I + G+ DSA+ F+ M E D ++ +++S L+R
Sbjct: 220 WNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 207 NGELDMAAGILL---------ECGDGDEG--------KHDLVQAYNTLIAGYGQSGKVEE 249
++D+A +L+ +CG K DL ++N +I G+ G+ EE
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLA-SWNAMILGFATHGRAEE 338
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCA- 308
A FDR+ D +E+ R N V++ +++ G + R+ FD M RD C
Sbjct: 339 AMNFFDRMV----DKREN---VRPNSVTFVGLLIACNHRGFVNKGRQYFDMM-VRDYCIE 390
Query: 309 -----WNTMISGYVQISDMEEASKLFKEMP-SPDALSWNSIISGFAQIG 351
+ ++ + + EA + MP PDA+ W S++ + G
Sbjct: 391 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 147/413 (35%), Gaps = 114/413 (27%)
Query: 122 KLFDEMPERDCVSWNTVISGYAKN-GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
++FD + WNT+I A + R ++A L+ M ER S + F+L
Sbjct: 104 RVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKA--- 160
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG 240
A I G + G + C G V N LI
Sbjct: 161 -----------------CAYIFGF--------SEGKQVHCQIVKHGFGGDVYVNNGLIHL 195
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
YG G ++ AR++FD +P R++VSWNSM+ V+ G+ SA +LF
Sbjct: 196 YGSCGCLDLARKVFDEMPE-------------RSLVSWNSMIDALVRFGEYDSALQLFRE 242
Query: 301 MGER------------DTCA---------W--------------------NTMISGYVQI 319
M CA W N++I Y +
Sbjct: 243 MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKC 302
Query: 320 SDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYD 379
+ A ++F+ M D SWN++I GFA G + A +FF+RM K
Sbjct: 303 GSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR------------ 350
Query: 380 KNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDL 437
E +P+ T +L C + G+Q ++ + + P L
Sbjct: 351 -----------------ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPAL 393
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
++ + +R G I EA + M D + W +++ G +V+ E
Sbjct: 394 EHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 40 NKKISHLIRT-GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
N + HL + G L AR FD M R+ V+WN++I V+ E A QLF EM QR
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSF 247
Query: 99 VSWNLIISGYFSCC---GSKFVEEGRKLF-----DEMPERDCVSWNTVISGYAKNGRMDQ 150
+ S C GS + F D D + N++I Y K G +
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRM 307
Query: 151 ALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
A ++F M +R+ S NA+I GF +G + A+ FF RM
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHR---NTVTWNTLIS-----GHVKRREI 83
E SL+ WN I L+R G A F M+ + T +++S G +
Sbjct: 214 ERSLV-SWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 84 AKARQL--FDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISG 141
A A L D D++ N +I Y C + E+ +F M +RD SWN +I G
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ---VFQGMQKRDLASWNAMILG 329
Query: 142 YAKNGRMDQALKLFDAMPE-RNAVSSNAV-ITGFLL----NGDVDSAVGFFKRM 189
+A +GR ++A+ FD M + R V N+V G L+ G V+ +F M
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 200/350 (57%), Gaps = 7/350 (2%)
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP 364
D NT+I Y I+ ++ A +LF E P D +++N +I G + ++ A++ F+ MP
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
++L+SWNSLI+GY + + AI+LF +M G KPD + S LS C D GK
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 425 MHQLVT-KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+H K + D + L+ Y++CG I A +F E+ K + TWNAMI G A HG
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF-ELCSDKTLFTWNAMITGLAMHG 329
Query: 484 LAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHF 543
++ F++M I P +TFISVL C+H+GLV+E R F+ M + Y + ++H+
Sbjct: 330 NGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY 389
Query: 544 ASFVDILGRQGQLQEAMDLINSMPV----KPDKAVWGALLGSCRVHGNVELAQVAAQALI 599
D+LGR G ++EA ++I MP + W LLG CR+HGN+E+A+ AA +
Sbjct: 390 GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Query: 600 SLEPESSGPYVLLYNMYANLELWDDAERVRVLME-EKNVKKQTGYSWVDS 648
+L PE G Y ++ MYAN E W++ +VR +++ +K VKK G+S V S
Sbjct: 450 ALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKVLS 499
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 146/326 (44%), Gaps = 64/326 (19%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
+ A FD R+ VT+N LI G VK REI +AR+LFD MP RD+VSWN +ISGY
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGY--- 224
Query: 112 CGSKFVEEGRKLFDEMP----ERDCVSWNTVISG-------------------------- 141
E KLFDEM + D V+ + +S
Sbjct: 225 AQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS 284
Query: 142 ---------YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
YAK G +D A+++F+ ++ + NA+ITG ++G+ + V +F++M
Sbjct: 285 FLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS 344
Query: 193 ----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL---VQAYNTLIAGYGQSG 245
D + +++ G +G +D A + D +D+ ++ Y + G++G
Sbjct: 345 GIKPDGVTFISVLVGCSHSGLVDEARNLF----DQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD---SMG 302
+EEA + +++P D G+ R +++W+ ++ G+I A + + ++
Sbjct: 401 LIEEAAEMIEQMPKDGGN--------REKLLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452
Query: 303 ERDTCAWNTMISGYVQISDMEEASKL 328
D + M+ Y EE K+
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKV 478
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 141/309 (45%), Gaps = 40/309 (12%)
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP 128
T NTLI + I A QLFDE PQRD+V++N++I G ++ + R+LFD MP
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK---AREIVRARELFDSMP 210
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFL----LNGDVDSAVG 184
RD VSWN++ISGYA+ +A+KLFD M N I L +GD
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 185 FF----KRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAG 240
++ DS + L+ + G +D A I C D + +N +I G
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD------KTLFTWNAMITG 324
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
G E F ++ + K DG V++ S+++ G + AR LFD
Sbjct: 325 LAMHGNGELTVDYFRKMVS--SGIKPDG-------VTFISVLVGCSHSGLVDEARNLFDQ 375
Query: 301 MGERDTCAWNTMISGYVQISDM-------EEASKLFKEMPSPDA-----LSWNSIISGFA 348
M R N + Y ++D+ EEA+++ ++MP L+W+ ++ G
Sbjct: 376 M--RSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCR 433
Query: 349 QIGDLKVAK 357
G++++A+
Sbjct: 434 IHGNIEIAE 442
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 47/241 (19%)
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCTGLV--DLYLGKQMH-QLVTKTVIPDLPINNSLITM 446
F +M+ PD HT V C DL L K +H Q + ++ DL N+LI +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 447 YSRCGAIGEACTVFNE-----MKFY-------------------------KDVITWNAMI 476
YS I A +F+E + Y +D+++WN++I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGI 536
GYA +A++LF +M L + P + +S L+ACA +G ++G+ I+DY
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGK-----AIHDYTK 276
Query: 537 EPR--VEHFAS--FVDILGRQGQLQEAMDLINSMPVKPDKAV--WGALLGSCRVHGNVEL 590
R ++ F + VD + G + AM++ + DK + W A++ +HGN EL
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE---LCSDKTLFTWNAMITGLAMHGNGEL 333
Query: 591 A 591
Sbjct: 334 T 334
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 24/279 (8%)
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
D + NT+I Y+ +D AL+LFD P+R+ V+ N +I G + ++ A F MP
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
D S ++LISG + A + E K D V +TL A QSG ++
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMV-ALGLKPDNVAIVSTLSAC-AQSGDWQKG 268
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN 310
+ + D +R + ++ Y K G I +A E+F+ ++ WN
Sbjct: 269 KAIHDYTKR---------KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWN 319
Query: 311 TMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
MI+G + E F++M S PD +++ S++ G + G + A++ F++M +
Sbjct: 320 AMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM--R 377
Query: 367 NLISWNSLIAGYDKNEDYKG-------AIELFSQMQLEG 398
+L N + Y D G A E+ QM +G
Sbjct: 378 SLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 196/316 (62%), Gaps = 6/316 (1%)
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
SP + N II +IG+ +AK +N+I+WN +I GY +N Y+ A++
Sbjct: 95 SPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKN 154
Query: 394 M-QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCG 451
M KP++ + +S L+ C L DL+ K +H L+ + I + ++++L+ +Y++CG
Sbjct: 155 MLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCG 214
Query: 452 AIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVL 511
IG + VF +K DV WNAMI G+A+HGLA +A+ +F +M+ + P ITF+ +L
Sbjct: 215 DIGTSREVFYSVK-RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 512 NACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPD 571
C+H GL+EEG+ F M + I+P++EH+ + VD+LGR G+++EA +LI SMP++PD
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 572 KAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVL 631
+W +LL S R + N EL ++A Q +L SG YVLL N+Y++ + W+ A++VR L
Sbjct: 334 VVIWRSLLSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVREL 390
Query: 632 MEEKNVKKQTGYSWVD 647
M ++ ++K G SW++
Sbjct: 391 MSKEGIRKAKGKSWLE 406
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 42/244 (17%)
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS 334
V + N ++ +K+G+ A+++ + +++ WN MI GYV+ EEA K K M S
Sbjct: 98 VCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLS 157
Query: 335 -----PDALSWNSIISGFAQIGDLKVAK-------------------------------- 357
P+ S+ S ++ A++GDL AK
Sbjct: 158 FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIG 217
Query: 358 ---DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
+ F + + ++ WN++I G+ + AI +FS+M+ E PD T +L+ C+
Sbjct: 218 TSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 415 GLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITW 472
L GK+ L+++ ++ P L +++ + R G + EA + M DV+ W
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 473 NAMI 476
+++
Sbjct: 338 RSLL 341
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 107/252 (42%), Gaps = 45/252 (17%)
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF- 254
+++ +I L++ GE +A +L D + V +N +I GY ++ + EEA +
Sbjct: 100 NINLIIESLMKIGESGLAKKVLRNASDQN------VITWNLMIGGYVRNVQYEEALKALK 153
Query: 255 ------DRIPNDQGDGKEDGRRFRR--------------------NVVSWNSMMMCYVKV 288
D PN R N + ++++ Y K
Sbjct: 154 NMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKC 213
Query: 289 GDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSII 344
GDI ++RE+F S+ D WN MI+G+ EA ++F EM SPD++++ ++
Sbjct: 214 GDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 345 SGFAQIGDLKVAKDFFERMP-----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
+ + G L+ K++F M Q L + +++ + K A EL M +E
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE-- 331
Query: 400 KPDRHTLSSVLS 411
PD S+LS
Sbjct: 332 -PDVVIWRSLLS 342
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 31/239 (12%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ-RDI 98
N I L++ G A+ + +N +TWN +I G+V+ + +A + M DI
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 99 VSWNLIISGYFSCCG-------SKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
+ + C +K+V + D E + + + ++ YAK G + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHS--LMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELD 211
++F ++ + NA+ITGF +G A+ F M + S GL+
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCS-- 277
Query: 212 MAAGILLECGDGDEGKHDL------------VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
CG +EGK ++ Y ++ G++G+V+EA L + +P
Sbjct: 278 -------HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMP 329
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 34/243 (13%)
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF-------DAMPERNAVSSNAVITG 172
+K+ +++ ++WN +I GY +N + ++ALK D P + + +S+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 173 FLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKH 228
L GD+ A M E ++ SAL+ + G++ + + D
Sbjct: 177 RL--GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND---- 230
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKV 288
V +N +I G+ G EA R+F + + + +++ ++
Sbjct: 231 --VSIWNAMITGFATHGLATEAIRVFSEM---------EAEHVSPDSITFLGLLTTCSHC 279
Query: 289 GDIVSARELFDSMGERDTCA-----WNTMISGYVQISDMEEASKLFKEMP-SPDALSWNS 342
G + +E F M R + + M+ + ++EA +L + MP PD + W S
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 343 IIS 345
++S
Sbjct: 340 LLS 342
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 214/378 (56%), Gaps = 34/378 (8%)
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKE 331
R +V+ +++ Y K G AR +FD M ++++ WNTMI GY++ ++ A+K+F +
Sbjct: 106 RNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDK 165
Query: 332 MPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELF 391
MP D +SW ++I+GF + G Q+ + W F
Sbjct: 166 MPERDLISWTAMINGFVKKG------------YQEEALLW-------------------F 194
Query: 392 SQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV-TKTVIPDLPINNSLITMYSRC 450
+MQ+ G KPD + + L+ CT L L G +H+ V ++ ++ ++NSLI +Y RC
Sbjct: 195 REMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 451 GAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISV 510
G + A VF M+ + V++WN++I G+A++G A ++L F++M+ P +TF
Sbjct: 255 GCVEFARQVFYNME-KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGA 313
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
L AC+H GLVEEG R F M DY I PR+EH+ VD+ R G+L++A+ L+ SMP+KP
Sbjct: 314 LTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKP 373
Query: 571 DKAVWGALLGSCRVHG-NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVR 629
++ V G+LL +C HG N+ LA+ + L L +S YV+L NMYA W+ A ++R
Sbjct: 374 NEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMR 433
Query: 630 VLMEEKNVKKQTGYSWVD 647
M+ +KKQ G+S ++
Sbjct: 434 RKMKGLGLKKQPGFSSIE 451
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 162/406 (39%), Gaps = 99/406 (24%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISG---- 76
+ N + S W +I+ L R GRL+EA F M N +T+ L+SG
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDF 84
Query: 77 -----------------------HV-----------KRREIAKARQLFDEMPQRDIVSWN 102
HV KR KAR +FD M ++ V+WN
Sbjct: 85 TSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWN 144
Query: 103 LIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
+I GY S V+ K+FD+MPERD +SW +I+G+ K G ++AL F M
Sbjct: 145 TMIDGYMR---SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ--- 198
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGL-VRNGELDMAAGILLECG 221
++G V + C +L AL GL V L
Sbjct: 199 ------------ISGVKPDYVAIIAALNAC--TNLGALSFGLWVHRYVL----------- 233
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
+ + V+ N+LI Y + G VE AR++F + +R VVSWNS+
Sbjct: 234 --SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-------------KRTVVSWNSV 278
Query: 282 MMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP---- 333
++ + G+ + F M E+ D + ++ + +EE + F+ M
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYR 338
Query: 334 -SPDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIAG 377
SP + ++ +++ G L+ A + MP K N + SL+A
Sbjct: 339 ISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA 384
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 42/315 (13%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN I +R+G++ A FD M R+ ++W +I+G VK+ +A F EM +
Sbjct: 143 WNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV 202
Query: 99 -VSWNLIISGYFSCCGSKFVEEG----RKLFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
+ II+ +C + G R + + + + N++I Y + G ++ A +
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALIS-----GL 204
+F M +R VS N+VI GF NG+ ++ +F++M E D+ + + ++ GL
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
V G + +++C D ++ Y L+ Y ++G++E+A +L +P +
Sbjct: 323 VEEG---LRYFQIMKC---DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE- 375
Query: 265 KEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM-- 322
VV + + C +IV A L + + + + S YV +S+M
Sbjct: 376 ----------VVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSH----SNYVILSNMYA 421
Query: 323 -----EEASKLFKEM 332
E ASK+ ++M
Sbjct: 422 ADGKWEGASKMRRKM 436
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 234/463 (50%), Gaps = 60/463 (12%)
Query: 230 LVQAYNTLIAGY----GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
+ N L+A + G + A R+F I N NV+ +N+M+ CY
Sbjct: 31 FLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNP-------------NVLVFNAMIKCY 77
Query: 286 VKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISD-------------------- 321
VG + + F SM R D + ++ +SD
Sbjct: 78 SLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLG 137
Query: 322 ---------------MEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
M +A K+F EM + + WN +I GF GD++ F++M ++
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
+++SWNS+I+ K + A+ELF +M +G PD T+ +VL + L L GK +H
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIH 257
Query: 427 QLVTKT-VIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
+ + D + + N+L+ Y + G + A +F +M+ ++V++WN +I G A +G
Sbjct: 258 STAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGK 316
Query: 485 AVDALELFKQM-KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHF 543
++LF M + K+ P TF+ VL C++ G VE G F M+ + +E R EH+
Sbjct: 317 GEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 544 ASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEP 603
+ VD++ R G++ EA + +MPV + A+WG+LL +CR HG+V+LA+VAA L+ +EP
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEP 436
Query: 604 ESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
+SG YVLL N+YA W D E+VR LM++ ++K TG S +
Sbjct: 437 GNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 140/324 (43%), Gaps = 65/324 (20%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF 109
GR+ +A+ FD M RN V WN +I G ++ + LF +M +R IVSWN +IS
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISS-L 209
Query: 110 SCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV- 164
S CG E +LF EM ++ D + TV+ A G +D K + E + +
Sbjct: 210 SKCGRD--REALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTG-KWIHSTAESSGLF 266
Query: 165 -----SSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
NA++ + +GD+++A F++M + S + LISG NG+
Sbjct: 267 KDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGK---------- 316
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
G+ G + ++ +I + GKV PN+ ++
Sbjct: 317 ---GEFG----IDLFDAMI----EEGKVA---------PNE---------------ATFL 341
Query: 280 SMMMCYVKVGDIVSARELFDSMGER-----DTCAWNTMISGYVQISDMEEASKLFKEMP- 333
++ C G + ELF M ER T + M+ + + EA K K MP
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPV 401
Query: 334 SPDALSWNSIISGFAQIGDLKVAK 357
+ +A W S++S GD+K+A+
Sbjct: 402 NANAAMWGSLLSACRSHGDVKLAE 425
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 181/476 (38%), Gaps = 107/476 (22%)
Query: 73 LISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMPERD 131
L+ GH R + ++ + + + NL+++ + S CGS + ++F + +
Sbjct: 10 LLHGHNTRTRLP---EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPN 66
Query: 132 CVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE 191
+ +N +I Y+ G ++L F +M R + L + S + F K
Sbjct: 67 VLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK---- 122
Query: 192 CDSASLSALISGLVRNGELDMAAGILLECGDG--------DEGKHDLVQAYNTLIAGYGQ 243
C L + +G R G++ + L G DE V +N +I G+
Sbjct: 123 CVHGEL--IRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF----- 298
SG VE LF ++ R++VSWNSM+ K G A ELF
Sbjct: 181 SGDVERGLHLFKQMSE-------------RSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 299 -----------------DSMGERDTCAW------------------NTMISGYVQISDME 323
S+G DT W N ++ Y + D+E
Sbjct: 228 QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 324 EASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNED 383
A+ +F++M + +SWN++ISG A G + D F+ M ++ ++
Sbjct: 288 AATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA------------- 334
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINN-- 441
P+ T VL+ C+ + G+++ L+ + + +
Sbjct: 335 -----------------PNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYG 377
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG---LA-VDALELFK 493
+++ + SR G I EA M + W +++ SHG LA V A+EL K
Sbjct: 378 AMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 145/346 (41%), Gaps = 24/346 (6%)
Query: 35 LLHQWNKKISHLIRT-GRLSE---ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLF 90
LH N ++H I G LS A F +++ N + +N +I + ++ F
Sbjct: 31 FLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFF 90
Query: 91 DEMPQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMPERDCVSWNTVISG----YAKN 145
M R I + + C S + G+ + E+ + G Y
Sbjct: 91 SSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSG 150
Query: 146 GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLV 205
GRM A K+FD M ERN V N +I GF +GDV+ + FK+M E S +++IS L
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLS 210
Query: 206 RNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
+ G D A + L C D+G D +A + S V + + G
Sbjct: 211 KCGR-DREA-LELFCEMIDQG-FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG--- 264
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA 325
F+ + N+++ Y K GD+ +A +F M R+ +WNT+ISG E
Sbjct: 265 ----LFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFG 320
Query: 326 SKLFKEM-----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
LF M +P+ ++ +++ + G ++ ++ F M ++
Sbjct: 321 IDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/669 (26%), Positives = 311/669 (46%), Gaps = 108/669 (16%)
Query: 54 EARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG 113
+A T FD + ++ V+WN +I+G + +A A + F M + I+ C
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 114 SK----FVEEGRKLFDEMPERDCVSW--------NTVISGYAKNGRMDQALKLFDAMPER 161
S GR++ + +R SW N+++S Y + GR+++A LF M +
Sbjct: 236 SMDKNIACRSGRQIHSYVVQR---SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Query: 162 NAVSSNAVITGFLLN----------------GDVDS-AVGFFKRMPECDSASLSALISGL 204
+ VS N VI G+ N GDV +V +P C A L+ L SG
Sbjct: 293 DLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC--AQLTDLASGK 350
Query: 205 VRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
+ + + LLE D G N LI+ Y + G A F +
Sbjct: 351 EIHSYI-LRHSYLLE--DTSVG--------NALISFYARFGDTSAAYWAFSLMST----- 394
Query: 265 KEDGRRFRRNVVSWNSMMMCYV-------------------------------------- 286
++++SWN+++ +
Sbjct: 395 --------KDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
Query: 287 ---KVGDI----VSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDAL- 338
KV ++ V A L D E + N ++ Y + ++E A K+F + L
Sbjct: 447 GIGKVKEVHGYSVKAGLLHD---EEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLV 503
Query: 339 SWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
S+NS++SG+ G A+ F M +L +W+ ++ Y ++ AI +F ++Q G
Sbjct: 504 SYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARG 563
Query: 399 EKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACT 458
+P+ T+ ++L VC L L+L +Q H + + + D+ + +L+ +Y++CG++ A +
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYS 623
Query: 459 VFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
VF + +D++ + AM+ GYA HG +AL ++ M I P ++ ++L AC HAG
Sbjct: 624 VF-QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 519 LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
L+++G + ++S+ +G++P +E +A VD++ R G+L +A + MPV+P+ +WG L
Sbjct: 683 LIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742
Query: 579 LGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
L +C + ++L A L+ E + +G +VL+ NMYA W+ +R LM++K +K
Sbjct: 743 LRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMK 802
Query: 639 KQTGYSWVD 647
K G SW++
Sbjct: 803 KPAGCSWLE 811
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 172/391 (43%), Gaps = 90/391 (23%)
Query: 137 TVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSAS 196
+V++ YAK RMD K+F M + V N V+TG ++ ++ + FFK M D
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADEPK 119
Query: 197 LSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR 256
S++ +V + + GD GK + ++ I G
Sbjct: 120 PSSVTFAIV--------LPLCVRLGDSYNGK-----SMHSYIIKAG-------------- 152
Query: 257 IPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS-ARELFDSMGERDTCAWNTMISG 315
++ + N+++ Y K G I A FD + ++D +WN +I+G
Sbjct: 153 --------------LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 316 YVQISDMEEASKLF----KEMPSPDAL-------------------------------SW 340
+ + + M +A + F KE P+ SW
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 341 --------NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
NS++S + ++G ++ A F RM K+L+SWN +IAGY N ++ A +LF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 393 QMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSR 449
+ +G+ PD T+ S+L VC L DL GK++H + + ++ D + N+LI+ Y+R
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYA 480
G A F+ M KD+I+WNA++ +A
Sbjct: 379 FGDTSAAYWAFSLMS-TKDIISWNAILDAFA 408
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/607 (19%), Positives = 250/607 (41%), Gaps = 112/607 (18%)
Query: 72 TLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKL-FDEMP-- 128
++++ + K R + +++F +M D V WN++++G CG + + + + F + P
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKP 120
Query: 129 ---------------------------------ERDCVSWNTVISGYAKNGRM-DQALKL 154
E+D + N ++S YAK G + A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 155 FDAMPERNAVSSNAVITGFLLNGDV-DSAVGFFKRMPECDSASLSALISGLVRNGELDMA 213
FD + +++ VS NA+I GF N + D+ F + E + + + + L +D
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 214 AGILLECGDGDEGKHDLVQ---------AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
+ C G + +VQ N+L++ Y + G++EEA LF R+ +
Sbjct: 241 ----IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGS----- 291
Query: 265 KEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-----DTCAWNTMISGYVQI 319
+++VSWN ++ Y + A +LF ++ + D+ +++ Q+
Sbjct: 292 --------KDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQL 343
Query: 320 SDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
+D+ ++ + D N++IS +A+ GD A F M K++ISWN++
Sbjct: 344 TDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAI 403
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI 434
+ + + + L + E D T+ S+L C + + K++H K +
Sbjct: 404 LDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGL 463
Query: 435 ----PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
+ + N+L+ Y++CG + A +F + + ++++N+++ GY + G DA
Sbjct: 464 LHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQM 523
Query: 491 LFKQMKRLKI-------------------------------HPTYITFISVLNACAHAGL 519
LF +M + P +T +++L CA
Sbjct: 524 LFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLAS 583
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ R+ +I + R++ + +D+ + G L+ A + S + D ++ A++
Sbjct: 584 LHLVRQCHGYIIRGGLGDIRLK--GTLLDVYAKCGSLKHAYSVFQS-DARRDLVMFTAMV 640
Query: 580 GSCRVHG 586
VHG
Sbjct: 641 AGYAVHG 647
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 204/499 (40%), Gaps = 84/499 (16%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N +S +R GR+ EA + F M ++ V+WN +I+G+ E KA QLF + + V
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 100 SWN--LIISGYFSCCGSKFVEEGRKLFDEMPER-----DCVSWNTVISGYAKNGRMDQAL 152
S + IIS C + G+++ + D N +IS YA+ G A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGF---------FKRMPECDSASLSALISG 203
F M ++ +S NA++ F DS F DS ++ +L+
Sbjct: 387 WAFSLMSTKDIISWNAILDAF-----ADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 204 LVRN---GELDMAAGILLECG---DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ G++ G ++ G D +E K N L+ Y + G VE A ++F
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG-----NALLDAYAKCGNVEYAHKIF--- 493
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYV 317
G RR +VS+NS++ YV G A+ LF M D W+ M+ Y
Sbjct: 494 ---------LGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYA 544
Query: 318 QISDMEEASKLFKEMPS----PDALSW--------------------------------- 340
+ EA +F+E+ + P+ ++
Sbjct: 545 ESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRL 604
Query: 341 -NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
+++ +A+ G LK A F+ +++L+ + +++AGY + K A+ ++S M
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEAC 457
KPD ++++L+ C + G Q++ + + P + + + +R G + +A
Sbjct: 665 KPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAY 724
Query: 458 TVFNEMKFYKDVITWNAMI 476
+ +M + W ++
Sbjct: 725 SFVTQMPVEPNANIWGTLL 743
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 44/303 (14%)
Query: 288 VGDIVSARELFDSMGERDTCAWN----TMISGYVQISDMEEASKLFKEMPSPDALSWNSI 343
V D+ S R L + + A + ++++ Y + M++ K+F++M S D + WN +
Sbjct: 34 VSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIV 93
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPD 402
++G S+ G + + F M E KP
Sbjct: 94 LTGL-------------------------SVSCG-------RETMRFFKAMHFADEPKPS 121
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAI-GEACTVF 460
T + VL +C L D Y GK MH + K + D + N+L++MY++ G I +A T F
Sbjct: 122 SVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAF 181
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG-- 518
+ + KDV++WNA+I G++ + + DA F M + P Y T +VL CA
Sbjct: 182 DGIA-DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 519 -LVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGA 577
GR+ + ++ ++ V S V R G+++EA L M K D W
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK-DLVSWNV 299
Query: 578 LLG 580
++
Sbjct: 300 VIA 302
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 187/667 (28%), Positives = 308/667 (46%), Gaps = 116/667 (17%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ----RDIVS-WNLIIS 106
L AR FD M ++ VTWNT++SG + + A LF +M D VS +NLI +
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 107 --------------------GYFSCCGSKFVE---------EGRKLFDEMPERDCVSWNT 137
G+ S ++ +F+E+ +D SW T
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 138 VISGYAKNGRMDQALKLFDAM----PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE-- 191
+++ YA NG ++ L+LFD M N V++ + + GD+ + +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 192 --CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEE 249
D + ++L+S + GEL++A + + D D V +++ +IA Y Q+G+ +E
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRD------VVSWSAMIASYEQAGQHDE 384
Query: 250 ARRLFD---RI---PND-------QGDGKEDGRRFRRNVVSW-------------NSMMM 283
A LF RI PN QG R +++ + +++
Sbjct: 385 AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVIS 444
Query: 284 CYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALS 339
Y K G A + F+ + +D A+N + GY QI D +A ++K M PD+ +
Sbjct: 445 MYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRT 504
Query: 340 W-----------------------------------NSIISGFAQIGDLKVAKDFFERMP 364
+++I+ F + L A F++
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 365 -QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
+K+ +SWN ++ GY + + A+ F QM++E +P+ T +++ L L +G
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 424 QMHQ-LVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
+H L+ P+ NSL+ MY++CG I + F E+ K +++WN M+ YA+H
Sbjct: 625 SVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWNTMLSAYAAH 683
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
GLA A+ LF M+ ++ P ++F+SVL+AC HAGLVEEG+R F M + IE VEH
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEH 743
Query: 543 FASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLE 602
+A VD+LG+ G EA++++ M VK VWGALL S R+H N+ L+ A L+ LE
Sbjct: 744 YACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLE 803
Query: 603 PESSGPY 609
P + Y
Sbjct: 804 PLNPSHY 810
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/664 (23%), Positives = 280/664 (42%), Gaps = 122/664 (18%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR-----DIVSWNLIISGYF 109
+R FDS++ V WN++I G+ + +A F M + D S+ +
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALK--- 108
Query: 110 SCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
+C GS ++G ++ D + E D ++ Y K + A ++FD M ++ V+
Sbjct: 109 ACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT 168
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDM--------- 212
N +++G NG +A+ F M C D SL LI + + + D+
Sbjct: 169 WNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI 228
Query: 213 --------AAGIL-LECGDGDEGKHDLV---------QAYNTLIAGYGQSGKVEEARRLF 254
++G++ + C D + V ++ T++A Y +G EE LF
Sbjct: 229 KKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 255 DRIPND-----------------------QGDGKED---GRRFRRNVVSWNSMMMCYVKV 288
D + N +G D + +V S+M Y K
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 289 GDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSII 344
G++ A +LF ++ +RD +W+ MI+ Y Q +EA LF++M P+A++ S++
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 345 SG-----------------------------------FAQIGDLKVAKDFFERMPQKNLI 369
G +A+ G A FER+P K+ +
Sbjct: 409 QGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAV 468
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QL 428
++N+L GY + D A +++ M+L G PD T+ +L C D G ++ Q+
Sbjct: 469 AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI 528
Query: 429 VTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+ + + ++LI M+++C A+ A +F++ F K ++WN M+ GY HG A +A
Sbjct: 529 IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEA 588
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
+ F+QMK K P +TF++++ A A + G +S+I G + S VD
Sbjct: 589 VATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ-CGFCSQTPVGNSLVD 647
Query: 549 ILGRQGQLQEA----MDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPE 604
+ + G ++ + +++ N V W +L + HG LA A +S++
Sbjct: 648 MYAKCGMIESSEKCFIEISNKYIVS-----WNTMLSAYAAHG---LASCAVSLFLSMQEN 699
Query: 605 SSGP 608
P
Sbjct: 700 ELKP 703
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 204/456 (44%), Gaps = 32/456 (7%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE---C 192
N +I+ Y+ R D + +FD++ + V N++I G+ G A+GFF M E
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
D S + G +D G+ + + G V L+ Y ++ + AR+
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTM 312
+FD++ ++VV+WN+M+ + G +A LF M R C
Sbjct: 157 VFDKM-------------HVKDVVTWNTMVSGLAQNGCSSAALLLFHDM--RSCCVDIDH 201
Query: 313 ISGYVQISDMEEASK---------LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
+S Y I + + K L + A S + +I + DL A+ FE +
Sbjct: 202 VSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS-SGLIDMYCNCADLYAAESVFEEV 260
Query: 364 PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
+K+ SW +++A Y N ++ +ELF M+ + ++ +S L + DL G
Sbjct: 261 WRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 424 QMHQL-VTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
+H V + +I D+ + SL++MYS+CG + A +F ++ +DV++W+AMI Y
Sbjct: 321 AIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE-DRDVVSWSAMIASYEQA 379
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
G +A+ LF+ M R+ I P +T SVL CA G+ I IE +E
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELET 438
Query: 543 FASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
+ + + + G+ A+ +P+K D + AL
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIK-DAVAFNAL 473
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 204/349 (58%), Gaps = 5/349 (1%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
E ++ Y+ +M +A K+F EMP + ++WN +I+G +GD + A F E+
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQM-QLEGEKPDRHTLSSVLSVCTGLVDLYL 421
MP + ++SW ++I GY + + K AI LFS+M + KP+ T+ ++L L DL +
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 422 GKQMHQLVTKT-VIP-DLPINNSLITMYSRCGAIGEACTVFNEM-KFYKDVITWNAMIGG 478
+H V K +P D+ + NSLI Y++CG I A F E+ K++++W MI
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 479 YASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF-NSMINDYGIE 537
+A HG+ +A+ +FK M+RL + P +T ISVLNAC+H GL EE +F N+M+N+Y I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 538 PRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQA 597
P V+H+ VD+L R+G+L+EA + +P++ VW LLG+C V+ + ELA+ +
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 598 LISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
L+ LE G YVL+ N++ + DA+R R M+ + V K G+S V
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 137/315 (43%), Gaps = 31/315 (9%)
Query: 119 EGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGD 178
+ K+FDEMPER+ V+WN +I+G G ++AL + MP R VS +I G+
Sbjct: 176 DAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDK 235
Query: 179 VDSAVGFFKRMPECDS-----ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQA 233
A+ F RM CD+ ++ A++ + G+L M + G D ++
Sbjct: 236 PKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD-IRV 294
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
N+LI Y + G ++ A + F IPN R+N+VSW +M+ + G
Sbjct: 295 TNSLIDAYAKCGCIQSAFKFFIEIPNG-----------RKNLVSWTTMISAFAIHGMGKE 343
Query: 294 ARELFDSMGERDTCAWN--TMISGYVQISD----MEEASKLFKEMP-----SPDALSWNS 342
A +F M ER N TMIS S EE + F M +PD +
Sbjct: 344 AVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGC 402
Query: 343 IISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGAIELFSQ-MQLEGEK 400
++ + G L+ A+ +P ++ + W L+ +D + A + + M+LE
Sbjct: 403 LVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSH 462
Query: 401 PDRHTLSSVLSVCTG 415
+ L S + TG
Sbjct: 463 GGDYVLMSNIFCGTG 477
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 55/329 (16%)
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
E + A++ +L+ G++ A F MPE + + + +I+GL G+ + A L
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL-- 212
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
++ + V ++ T+I GY + K +EA LF R+ + N ++
Sbjct: 213 ----EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA--------IKPNEITIL 260
Query: 280 SMMMCYVKVGDIVSARELFDSMGER-----DTCAWNTMISGYVQISDMEEASKLFKEMPS 334
+++ +GD+ + +G+R D N++I Y + ++ A K F E+P+
Sbjct: 261 AILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPN 320
Query: 335 --PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFS 392
+ +SW ++IS FA I G K A+ +F
Sbjct: 321 GRKNLVSWTTMISAFA--------------------------IHGMGKE-----AVSMFK 349
Query: 393 QMQLEGEKPDRHTLSSVLSVCT--GLVDLYLGKQMHQLVTK-TVIPDLPINNSLITMYSR 449
M+ G KP+R T+ SVL+ C+ GL + + + +V + + PD+ L+ M R
Sbjct: 350 DMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRR 409
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGG 478
G + EA + E+ + + W ++G
Sbjct: 410 KGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 49/254 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN I+ L G +A F + M +R V+W T+I G+ + + +A LF M D
Sbjct: 192 WNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA 251
Query: 99 VS-------------WNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKN 145
+ WNL G CGS G++ F D N++I YAK
Sbjct: 252 IKPNEITILAILPAVWNL---GDLKMCGSVHAYVGKRGFVPC---DIRVTNSLIDAYAKC 305
Query: 146 GRMDQALKLFDAMP--ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISG 203
G + A K F +P +N VS +I+ F ++G AV FK M G
Sbjct: 306 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERL----------G 355
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG----------------QSGKV 247
L N + M + +L C G + + ++ +NT++ Y + G++
Sbjct: 356 LKPN-RVTMIS-VLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRL 413
Query: 248 EEARRLFDRIPNDQ 261
EEA ++ IP ++
Sbjct: 414 EEAEKIALEIPIEE 427
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/426 (32%), Positives = 234/426 (54%), Gaps = 23/426 (5%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N ++ + + G + +ARRLFD IP RN+ S+ S++ +V G+ V A
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPE-------------RNLYSYYSIISGFVNFGNYVEA 208
Query: 295 RELFDSMGER----DTCAWNTMISGYVQISDMEEASKL----FKEMPSPDALSWNSIISG 346
ELF M E +T + M+ + + +L K + +I
Sbjct: 209 FELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+++ GD++ A+ FE MP+K ++WN++IAGY + + A+ L M+ G D+ TL
Sbjct: 269 YSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTL 328
Query: 407 SSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
S ++ + T L L L KQ H L+ ++ N +L+ YS+ G + A VF+++
Sbjct: 329 SIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLP- 387
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
K++I+WNA++GGYA+HG DA++LF++M + P ++TF++VL+ACA++GL E+G
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWE 447
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
F SM +GI+PR H+A +++LGR G L EA+ I P+K +W ALL +CR+
Sbjct: 448 IFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQ 507
Query: 586 GNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
N+EL +V A+ L + PE G YV++YNMY ++ +A V +E K + +W
Sbjct: 508 ENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTW 567
Query: 646 VDSSNR 651
V+ ++
Sbjct: 568 VEVGDQ 573
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 17/305 (5%)
Query: 294 ARELFDSMGERDTCAWNTMISGY-------VQISDMEEASKLFKEMPS----PDALSWNS 342
A ELF+ + R C++ +S Y +++ + +++ M S P+ N
Sbjct: 106 AFELFEILEIR--CSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNR 163
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
I+ + G + A+ F+ +P++NL S+ S+I+G+ +Y A ELF M E +
Sbjct: 164 ILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCE 223
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFN 461
HT + +L GL +Y+GKQ+H K V+ + ++ LI MYS+CG I +A F
Sbjct: 224 THTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFE 283
Query: 462 EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
M K + WN +I GYA HG + +AL L M+ + T ++ +E
Sbjct: 284 CMP-EKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLE 342
Query: 522 EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
++ S+I + G E + + VD + G++ A + + +P K + W AL+G
Sbjct: 343 LTKQAHASLIRN-GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRK-NIISWNALMGG 400
Query: 582 CRVHG 586
HG
Sbjct: 401 YANHG 405
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 166/414 (40%), Gaps = 95/414 (22%)
Query: 11 LQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTW 70
++L C + + F +N E + N+ + ++ G + +AR FD + RN ++
Sbjct: 134 IRLKSIRCVKRVYGFMMSNGFEPEQ-YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSY 192
Query: 71 NTLISGHVKRREIAKARQLFDEM----------------------------PQRDIVSWN 102
++ISG V +A +LF M Q + +
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK 252
Query: 103 L-IISGYFSCCG-----SKF--VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
L ++ F CG SK +E+ R F+ MPE+ V+WN VI+GYA +G ++AL L
Sbjct: 253 LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM-- 212
M DS V D +LS +I + +L++
Sbjct: 313 LYDMR--------------------DSGVSI-------DQFTLSIMIRISTKLAKLELTK 345
Query: 213 -AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
A L+ G E + A L+ Y + G+V+ AR +FD++P
Sbjct: 346 QAHASLIRNGFESE-----IVANTALVDFYSKWGRVDTARYVFDKLP------------- 387
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC----AWNTMISGYVQISDMEEASK 327
R+N++SWN++M Y G A +LF+ M + + ++S E+ +
Sbjct: 388 RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWE 447
Query: 328 LFKEMP-----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-WNSLI 375
+F M P A+ + +I + G L A F R P K ++ W +L+
Sbjct: 448 IFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALL 501
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 166/639 (25%), Positives = 285/639 (44%), Gaps = 95/639 (14%)
Query: 62 MKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS-KFVEEG 120
+ H+ N + K R++ +A + EM + + + F C + + G
Sbjct: 43 ISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHG 102
Query: 121 RKLFDEM----PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
R L D M + N V+ Y + ++ A KLFD M E NAVS
Sbjct: 103 RLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSR---------- 152
Query: 177 GDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGI---LLECGDGDEGKHDLVQA 233
+ +IS G LD A G+ +L GD
Sbjct: 153 ---------------------TTMISAYAEQGILDKAVGLFSGMLASGDKPPS-----SM 186
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
Y TL+ ++ R++ + G +V+ YVK G +V
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRA---GLCSNTSIETGIVNM------YVKCGWLVG 237
Query: 294 ARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP----DALSWNSIISGFAQ 349
A+ +FD M + A ++ GY Q +A KLF ++ + D+ ++ ++ A
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 350 IGDLKVAK----------------------DF-------------FERMPQKNLISWNSL 374
+ +L + K DF F+ + + N +SW+++
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 357
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKP-DRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKT 432
I+GY + ++ A++ F ++ + + T +S+ C+ L D +G Q+H + ++
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 417
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF 492
+I ++LITMYS+CG + +A VF M D++ W A I G+A +G A +AL LF
Sbjct: 418 LIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
++M + P +TFI+VL AC+HAGLVE+G+ ++M+ Y + P ++H+ +DI R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 553 QGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLL 612
G L EA+ + +MP +PD W L C H N+EL ++A + L L+PE + YVL
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLP 596
Query: 613 YNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
+N+Y W++A + LM E+ +KK+ SW+ +
Sbjct: 597 FNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGK 635
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 103/486 (21%), Positives = 184/486 (37%), Gaps = 105/486 (21%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEM-PQRDIVSWNLIISGYFS 110
L +A FD M N V+ T+IS + ++ + KA LF M D ++ + S
Sbjct: 134 LEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKS 193
Query: 111 CCGSKFVEEGRKLFDEMPERDCVSWNTVISG----YAKNGRMDQALKLFDAMPERNAVSS 166
+ ++ GR++ + S ++ +G Y K G + A ++FD M + V+
Sbjct: 194 LVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAC 253
Query: 167 NAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILLECGD 222
++ G+ G A+ F + E DS S ++ EL++ G +
Sbjct: 254 TGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL--GKQIHACV 311
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI--PNDQGDGKEDGRRFRRNVVSWNS 280
G V L+ Y + E A R F I PND VSW++
Sbjct: 312 AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND---------------VSWSA 356
Query: 281 MMMCYVKVGDIVSARELFDSMGERDTCAWNT----------------------------- 311
++ Y ++ A + F S+ ++ N+
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 312 -----------MISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
+I+ Y + +++A+++F+ M +PD ++W + ISG A G+
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA------- 469
Query: 361 ERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT--GLVD 418
A+ LF +M G KP+ T +VL+ C+ GLV+
Sbjct: 470 ------------------------SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVE 505
Query: 419 LYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
GK + + V P + + +I +Y+R G + EA M F D ++W +
Sbjct: 506 --QGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 477 GGYASH 482
G +H
Sbjct: 564 SGCWTH 569
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 164/398 (41%), Gaps = 64/398 (16%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN 102
++ ++ G L A+ FD M + V L+ G+ + A +LF ++ + +
Sbjct: 226 VNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDS 285
Query: 103 LIISGYFSCCGSKFVEE---GRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLF 155
+ S C S +EE G+++ + E + ++ Y K + A + F
Sbjct: 286 FVFSVVLKACAS--LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
+ E N VS +A+I+G+ + AV FK + +++ L++ + A
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ-----ACS 398
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAG-YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
+L +C G + D ++ +LI YG+S
Sbjct: 399 VLADCNIGGQVHADAIK--RSLIGSQYGESA----------------------------- 427
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS 334
++ Y K G + A E+F+SM D AW ISG+ + EA +LF++M S
Sbjct: 428 ------LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 335 ----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-----WNSLIAGYDKNEDYK 385
P+++++ ++++ + G ++ K + M +K ++ ++ +I Y ++
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
A++ M E PD + LS C +L LG+
Sbjct: 542 EALKFMKNMPFE---PDAMSWKCFLSGCWTHKNLELGE 576
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 135/308 (43%), Gaps = 36/308 (11%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRD--IVS 100
+ I+ A F ++ N V+W+ +ISG+ + + +A + F + ++ I++
Sbjct: 327 VDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILN 386
Query: 101 WNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSW----NTVISGYAKNGRMDQALKLFD 156
S + +C G ++ + +R + + +I+ Y+K G +D A ++F+
Sbjct: 387 SFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFE 446
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDM 212
+M + V+ A I+G G+ A+ F++M C +S + A+++ G ++
Sbjct: 447 SMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQ 506
Query: 213 AAGILLECGDGDEGKHDL---VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
C D K+++ + Y+ +I Y +SG ++EA + +P
Sbjct: 507 GK----HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP----------- 551
Query: 270 RFRRNVVSWNSMMM-CY----VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEE 324
F + +SW + C+ +++G+I A E + DT + + Y EE
Sbjct: 552 -FEPDAMSWKCFLSGCWTHKNLELGEI--AGEELRQLDPEDTAGYVLPFNLYTWAGKWEE 608
Query: 325 ASKLFKEM 332
A+++ K M
Sbjct: 609 AAEMMKLM 616
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
ES+L+ ++K G L +A F+SM + + V W ISGH ++A +LF+
Sbjct: 425 ESALITMYSK-------CGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 477
Query: 92 EMPQRDIVSWNL-IISGYFSCCGSKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKN 145
+M + ++ I+ +C + VE+G+ D M + V+ ++ +I YA++
Sbjct: 478 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARS 537
Query: 146 GRMDQALKLFDAMP-ERNAVSSNAVITG 172
G +D+ALK MP E +A+S ++G
Sbjct: 538 GLLDEALKFMKNMPFEPDAMSWKCFLSG 565
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 220/397 (55%), Gaps = 41/397 (10%)
Query: 294 ARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSI------ 343
AR LF++M E D +N+M GY + ++ E LF E+ PD ++ S+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 344 -----------------------------ISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
I+ + + D+ A+ F+R+ + ++ +N++
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK-TV 433
I GY + A+ LF +MQ + KP+ TL SVLS C L L LGK +H+ K +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 434 IPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFK 493
+ +N +LI M+++CG++ +A ++F +M+ YKD W+AMI YA+HG A ++ +F+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 494 QMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQ 553
+M+ + P ITF+ +LNAC+H G VEEGR+ F+ M++ +GI P ++H+ S VD+L R
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 554 GQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLY 613
G L++A + I+ +P+ P +W LL +C H N++LA+ ++ + L+ G YV+L
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 440
Query: 614 NMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSN 650
N+YA + W+ + +R +M+++ K G S ++ +N
Sbjct: 441 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 119/238 (50%), Gaps = 4/238 (1%)
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ A+ FE M + +++ +NS+ GY + + LF ++ +G PD +T S+L
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 413 CTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT 471
C L G+Q+H L K + D + + +LI MY+ C + A VF+ + V+
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI-VEPCVVC 197
Query: 472 WNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI 531
+NAMI GYA +AL LF++M+ + P IT +SVL++CA G ++ G + +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYA 256
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
+ V+ + +D+ + G L +A+ + M K D W A++ + HG E
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGKAE 313
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 41/251 (16%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP 333
NV +++ Y + D+ SAR +FD + E +N MI+GY + + EA LF+EM
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 334 ----SPDALSWNSIISG-----------------------------------FAQIGDLK 354
P+ ++ S++S FA+ G L
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLD 282
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
A FE+M K+ +W+++I Y + + ++ +F +M+ E +PD T +L+ C+
Sbjct: 283 DAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACS 342
Query: 415 GLVDLYLG-KQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITW 472
+ G K Q+V+K ++P + S++ + SR G + +A +++ + W
Sbjct: 343 HTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLW 402
Query: 473 NAMIGGYASHG 483
++ +SH
Sbjct: 403 RILLAACSSHN 413
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 153/352 (43%), Gaps = 48/352 (13%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
+S AR F++M + V +N++ G+ + + LF E+ + I+ N
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 112 CG-SKFVEEGRKLFDEMPERDCVSWN-----------TVISGYAKNGRMDQALKLFDAMP 159
C +K +EEGR+L C+S T+I+ Y + +D A +FD +
Sbjct: 139 CAVAKALEEGRQL-------HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAG 215
E V NA+ITG+ + A+ F+ M + + +L +++S G LD+
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
I K+ V+ LI + + G +++A +F+++ R+ ++
Sbjct: 252 IHKYAKKHSFCKY--VKVNTALIDMFAKCGSLDDAVSIFEKM------------RY-KDT 296
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKE 331
+W++M++ Y G + +F+ M + D + +++ +EE K F +
Sbjct: 297 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQ 356
Query: 332 MPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAG 377
M S P + S++ ++ G+L+ A +F +++P + W L+A
Sbjct: 357 MVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAA 408
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 231/411 (56%), Gaps = 50/411 (12%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC--AWNTMISGYVQISDMEEASKL 328
R N+ + ++ Y G A E+FD M +RD+ AWN++ISGY ++ E+A L
Sbjct: 123 LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL 182
Query: 329 FKEMP----SPDALSW-----------------------------------NSIISGFAQ 349
+ +M PD ++ N+++ +A+
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
GD+ A++ F+ +P K+ +SWNS++ GY + A+++F M G +PD+ +SSV
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV 302
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
L+ ++ G+Q+H V + + +L + N+LI +YS+ G +G+AC +F++M +D
Sbjct: 303 LA---RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-LERD 358
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
++WNA+I ++H + L+ F+QM R P ITF+SVL+ CA+ G+VE+G R F+
Sbjct: 359 TVSWNAII---SAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFS 415
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI-NSMPVKPDKAVWGALLGSCRVHGN 587
M +YGI+P++EH+A V++ GR G ++EA +I M ++ VWGALL +C +HGN
Sbjct: 416 LMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGN 475
Query: 588 VELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
++ +VAAQ L LEP++ + LL +Y+ + +D ERVR +M ++ ++
Sbjct: 476 TDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 72/318 (22%)
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPND----------------QGDGK-EDGRRFRRNV 275
A+N+LI+GY + G+ E+A L+ ++ D G G + G R++
Sbjct: 162 AWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDL 221
Query: 276 VS---------WNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
V N++++ Y K GDIV AR +FD + +D +WN+M++GY+ + EA
Sbjct: 222 VKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEAL 281
Query: 327 KLFKEM------PSPDALS-----------------W-------------NSIISGFAQI 350
+F+ M P A+S W N++I +++
Sbjct: 282 DIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKR 341
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G L A F++M +++ +SWN++I+ + KN + ++ F QM KPD T SVL
Sbjct: 342 GQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVL 398
Query: 411 SVC--TGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACT-VFNEMKF 465
S+C TG+V+ G+++ L++K + P + ++ +Y R G + EA + + EM
Sbjct: 399 SLCANTGMVE--DGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGL 456
Query: 466 YKDVITWNAMIGGYASHG 483
W A++ HG
Sbjct: 457 EAGPTVWGALLYACYLHG 474
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEM- 463
+S+L C L + G ++H L+ ++ + L I++ L+ +Y+ CG A VF+ M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 464 KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
K WN++I GYA G DA+ L+ QM + P TF VL AC G V+ G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 524 RRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCR 583
++ + G V + V + + G + +A ++ + +P K D W ++L
Sbjct: 215 EAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHK-DYVSWNSMLTGYL 272
Query: 584 VHG 586
HG
Sbjct: 273 HHG 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 131/295 (44%), Gaps = 30/295 (10%)
Query: 50 GRLSEARTFFDSMKHRNT--VTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
G A FD M R++ WN+LISG+ + + A L+ +M + +
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPR 200
Query: 108 YFSCC---GSKFVEEG--RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
C GS + E R L E D N ++ YAK G + +A +FD +P ++
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILL 218
VS N+++TG+L +G + A+ F+ M E D ++S++++ ++ G ++
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVI 320
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
G E + N LI Y + G++ +A +FD++ R+ VSW
Sbjct: 321 RRGMEWE-----LSVANALIVLYSKRGQLGQACFIFDQM-------------LERDTVSW 362
Query: 279 NSMMMCYVKVGDIVSARE-LFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM 332
N+++ + K + + E + + + D + +++S +E+ +LF M
Sbjct: 363 NAIISAHSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/321 (38%), Positives = 198/321 (61%), Gaps = 6/321 (1%)
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
D ++++ +++ GD++ A+ F+RMP+K++++WNSL++G+++N AI++F QM+
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 396 LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ-LVTKTVIPDLPINNSLITMYSRCGAIG 454
G +PD T S+LS C + LG +HQ ++++ + ++ + +LI +YSRCG +G
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK-RLKIHPTYITFISVLNA 513
+A VF++MK +V W AMI Y +HG A+ELF +M+ P +TF++VL+A
Sbjct: 261 KAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK---P 570
CAHAGLVEEGR + M Y + P VEH VD+LGR G L EA I+ +
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKAT 379
Query: 571 DKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
A+W A+LG+C++H N +L A+ LI+LEP++ G +V+L N+YA D+ +R
Sbjct: 380 APALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRD 439
Query: 631 LMEEKNVKKQTGYSWVDSSNR 651
M N++KQ GYS ++ N+
Sbjct: 440 GMMRNNLRKQVGYSVIEVENK 460
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 49/250 (19%)
Query: 280 SMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SP 335
+++ Y K GD+ AR++FD M E+ AWN+++SG+ Q +EA ++F +M P
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 336 DALSWNSIISGFAQIG-----------------DLKV------------------AKDFF 360
D+ ++ S++S AQ G DL V A++ F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 361 ERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE-GEKPDRHTLSSVLSVC--TGLV 417
++M + N+ +W ++I+ Y + + A+ELF++M+ + G P+ T +VLS C GLV
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 418 DLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT---W 472
+ G+ +++ +TK+ +IP + + ++ M R G + EA +++ W
Sbjct: 327 E--EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALW 384
Query: 473 NAMIGGYASH 482
AM+G H
Sbjct: 385 TAMLGACKMH 394
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 136/328 (41%), Gaps = 63/328 (19%)
Query: 108 YFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN 167
++S CG +E R++FD MPE+ V+WN+++SG+ +NG D+A+++F M E
Sbjct: 151 FYSKCGD--MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE------- 201
Query: 168 AVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGK 227
+GF E DSA+ +L+S + G + + G + EG
Sbjct: 202 ---SGF-----------------EPDSATFVSLLSACAQTGAVSL--GSWVHQYIISEGL 239
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
V+ LI Y + G V +AR +FD++ NV +W +M+ Y
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKET-------------NVAAWTAMISAYGT 286
Query: 288 VGDIVSARELFDSMGERDTC-------AWNTMISGYVQISDMEEASKLFKEMPS-----P 335
G A ELF+ M D C + ++S +EE ++K M P
Sbjct: 287 HGYGQQAVELFNKM--EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIP 344
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS----WNSLIAGYDKNEDYKGAIELF 391
++ + G L A F ++ + W +++ + +Y +E+
Sbjct: 345 GVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIA 404
Query: 392 SQM-QLEGEKPDRHTLSSVLSVCTGLVD 418
++ LE + P H + S + +G D
Sbjct: 405 KRLIALEPDNPGHHVMLSNIYALSGKTD 432
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 45/187 (24%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR----------- 96
+ G + AR FD M ++ V WN+L+SG + +A Q+F +M +
Sbjct: 154 KCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVS 213
Query: 97 -----------DIVSW--NLIIS--------------GYFSCCGSKFVEEGRKLFDEMPE 129
+ SW IIS +S CG V + R++FD+M E
Sbjct: 214 LLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGD--VGKAREVFDKMKE 271
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAM-----PERNAVSSNAVITGFLLNGDVDSAVG 184
+ +W +IS Y +G QA++LF+ M P N V+ AV++ G V+
Sbjct: 272 TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 185 FFKRMPE 191
+KRM +
Sbjct: 332 VYKRMTK 338
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 192/317 (60%), Gaps = 14/317 (4%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQK-NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
S++ ++ +GD+ A+ F+ P+K N++ W ++I+ Y +NE+ AIELF +M+ E
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT---VIPDLPINNSLITMYSRCGAIGEA 456
+ D ++ LS C L + +G++++ K + DL + NSL+ MY + G +A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 457 CTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK------IHPTYITFISV 510
+F+E KDV T+ +MI GYA +G A ++LELFK+MK + I P +TFI V
Sbjct: 224 RKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 511 LNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKP 570
L AC+H+GLVEEG+R F SMI DY ++PR HF VD+ R G L++A + IN MP+KP
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 571 DKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
+ +W LLG+C +HGNVEL + + + L+ + G YV L N+YA+ +WD+ ++R
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMR- 401
Query: 631 LMEEKNVKKQTGYSWVD 647
+ ++ G SW++
Sbjct: 402 --DRVRKRRMPGKSWIE 416
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 139/335 (41%), Gaps = 57/335 (17%)
Query: 49 TGRLSEARTFFDSMKHR-NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
G + AR FD + N V W +IS + + +A +LF M I +I++
Sbjct: 113 VGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTV 172
Query: 108 YFSCCGS-KFVEEGRKLFDEMPER------DCVSWNTVISGYAKNGRMDQALKLFDAMPE 160
S C V+ G +++ +R D N++++ Y K+G ++A KLFD
Sbjct: 173 ALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMR 232
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLEC 220
++ + ++I G+ LNG ++ FK+M D + + + V G+L+ C
Sbjct: 233 KDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDV------TFIGVLMAC 286
Query: 221 ---GDGDEGKH---DLVQAYN---------TLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
G +EGK ++ YN ++ + +SG +++A +++P
Sbjct: 287 SHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP------- 339
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM--- 322
+ N V W +++ G++ E+ + E D + YV +S++
Sbjct: 340 -----IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD----RDHVGDYVALSNIYAS 390
Query: 323 ----EEASKLF-----KEMPSPDALSWNSIISGFA 348
+E SK+ + MP + SII+ F
Sbjct: 391 KGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEFV 425
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 44/312 (14%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPER-NAVSSNAVITGFLLNGDVDSAVGFFKRMP---- 190
+++ Y+ G +D A ++FD PE+ N V A+I+ + N + A+ FKRM
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
E D ++ +S G + M I + N+L+ Y +SG+ E+A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN 310
R+LFD R++V ++ SM+ Y G + ELF M D + +
Sbjct: 224 RKLFD-------------ESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQ-SQD 269
Query: 311 TMIS-------GYVQISD----MEEASKLFKEMP-----SPDALSWNSIISGFAQIGDLK 354
T+I+ G + +EE + FK M P + ++ F + G LK
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 355 VAKDFFERMPQK-NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
A +F +MP K N + W +L+ G +EL ++Q + DR + ++
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGAC----SLHGNVELGEEVQRRIFELDRDHVGDYVA-- 383
Query: 414 TGLVDLYLGKQM 425
L ++Y K M
Sbjct: 384 --LSNIYASKGM 393
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 45/230 (19%)
Query: 422 GKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYA 480
G+Q+H LV K + I SL+ YS G + A VF+E ++++ W AMI Y
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF------------- 527
+ +V+A+ELFK+M+ KI + L+ACA G V+ G +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 528 ----NSMINDY---------------GIEPRVEHFASFVDILGRQGQLQEAMDLINSMP- 567
NS++N Y + V + S + GQ QE+++L M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 568 --------VKPDKAVWGALLGSCRVHGNVELAQVAAQALI---SLEPESS 606
+ P+ + +L +C G VE + +++I +L+P +
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREA 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 107/255 (41%), Gaps = 50/255 (19%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGER-DTCAWNTMISGYVQISDMEEASKLFKEMPSPD- 336
S++ Y VGD+ AR++FD E+ + W MIS Y + + EA +LFK M +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 337 ---------ALSW-------------------------------NSIISGFAQIGDLKVA 356
ALS NS+++ + + G+ + A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 357 KDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK------PDRHTLSSVL 410
+ F+ +K++ ++ S+I GY N + ++ELF +M+ + P+ T VL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 411 SVC--TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
C +GLV+ ++ + P ++ ++ R G + +A N+M +
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 469 VITWNAMIGGYASHG 483
+ W ++G + HG
Sbjct: 344 TVIWRTLLGACSLHG 358
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 183/302 (60%), Gaps = 2/302 (0%)
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+A GDL+ A F + ++LI WN++I+GY + + + ++ M+ PD++T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 407 SSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKF 465
+SV C+ L L GK+ H ++ K I ++ ++++L+ MY +C + + VF+++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS- 271
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
++VITW ++I GY HG + L+ F++MK P +TF+ VL AC H GLV++G
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE 331
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
F SM DYGIEP +H+A+ VD LGR G+LQEA + + P K VWG+LLG+CR+H
Sbjct: 332 HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIH 391
Query: 586 GNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
GNV+L ++AA + L+P + G YV+ N YA+ L + A +VR ME VKK GYS
Sbjct: 392 GNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQ 451
Query: 646 VD 647
++
Sbjct: 452 IE 453
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 22/225 (9%)
Query: 49 TGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY 108
+G L A F S+K R+ + WN +ISG+V++ + ++ +M Q IV +
Sbjct: 156 SGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASV 215
Query: 109 FSCCGS-KFVEEGRKLFDEMPERDCVSWNTVISG-----YAKNGRMDQALKLFDAMPERN 162
F C + +E G++ M +R C+ N ++ Y K ++FD + RN
Sbjct: 216 FRACSALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRN 274
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPE--CDSASLSALI-------SGLVRNGELDMA 213
++ ++I+G+ +G V + F++M E C ++ L+ GLV G +
Sbjct: 275 VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHF 333
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+ + G EG+H Y ++ G++G+++EA + P
Sbjct: 334 YSMKRDYGIEPEGQH-----YAAMVDTLGRAGRLQEAYEFVMKSP 373
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 156/394 (39%), Gaps = 56/394 (14%)
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
+ +G F+ + + L + GL G L A G+L G E + Y L+
Sbjct: 62 EKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWSSGLQVEP-----ETYAVLLQ 116
Query: 240 GYGQSGKVEEARRLFDRI------PND------------QGDGKEDGRRFR----RNVVS 277
Q + + +R+ ++ N+ GD + G FR R+++
Sbjct: 117 ECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIP 176
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASK----LF 329
WN+M+ YV+ G ++ M + D + ++ + +E + +
Sbjct: 177 WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 236
Query: 330 KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
K + + ++++ + + F+++ +N+I+W SLI+GY + ++
Sbjct: 237 KRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLK 296
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCT--GLVD-----LYLGKQMHQLVTKTVIPDLPINNS 442
F +M+ EG +P+ T VL+ C GLVD Y K+ + + P+ +
Sbjct: 297 CFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY-----GIEPEGQHYAA 351
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
++ R G + EA + + W +++G HG V LEL K L++ P
Sbjct: 352 MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG-NVKLLEL-AATKFLELDP 409
Query: 503 T----YITFISVLNACAHAGLVEEGRRQFNSMIN 532
T Y+ F N A GL E + M N
Sbjct: 410 TNGGNYVVFA---NGYASCGLREAASKVRRKMEN 440
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 148/376 (39%), Gaps = 46/376 (12%)
Query: 13 LPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEA-RTFFDSMKHRNTVTWN 71
L R L + + F N ++ L +K + L TGRL EA + S T+
Sbjct: 56 LRRMLAEKRIGRFQVENQRKTEKL---DKTLKGLCVTGRLKEAVGLLWSSGLQVEPETYA 112
Query: 72 TLISGHVKRREIAKARQLFDEM-----PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDE 126
L+ +R+E K +++ +M + + L+I ++ G ++ LF
Sbjct: 113 VLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLI--LYALSGD--LQTAGILFRS 168
Query: 127 MPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF 186
+ RD + WN +ISGY + G + L ++ M + N ++ V A
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQ------NRIVPDQYTFASVFRACSAL 222
Query: 187 KRMPECDSASLSALISGLVRNGELDMA-AGILLECGDGDEGKHDLVQ-------AYNTLI 238
R+ A + + N +D A + +C +G Q + +LI
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
+GYG GKV E + F+++ KE+G R N V++ ++ G + E F
Sbjct: 283 SGYGYHGKVSEVLKCFEKM-------KEEG--CRPNPVTFLVVLTACNHGGLVDKGWEHF 333
Query: 299 DSMG-----ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALS-WNSIISGFAQIGD 352
SM E + + M+ + ++EA + + P + W S++ G+
Sbjct: 334 YSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN 393
Query: 353 LKV----AKDFFERMP 364
+K+ A F E P
Sbjct: 394 VKLLELAATKFLELDP 409
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 202/339 (59%), Gaps = 6/339 (1%)
Query: 311 TMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLI 369
++ Y + + A KLF E+P +A+ WN++IS + G +K A + +E M N
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 370 SWNSLIAGYDKNED--YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ 427
S+N++I G ED Y+ AIE + +M KP+ TL +++S C+ + L K++H
Sbjct: 148 SFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHS 206
Query: 428 LVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAV 486
+ +I P + + L+ Y RCG+I VF+ M+ +DV+ W+++I YA HG A
Sbjct: 207 YAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-DRDVVAWSSLISAYALHGDAE 265
Query: 487 DALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
AL+ F++M+ K+ P I F++VL AC+HAGL +E F M DYG+ +H++
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCL 325
Query: 547 VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
VD+L R G+ +EA +I +MP KP WGALLG+CR +G +ELA++AA+ L+ +EPE+
Sbjct: 326 VDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENP 385
Query: 607 GPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
YVLL +Y ++ ++AER+R+ M+E VK G SW
Sbjct: 386 ANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 156/398 (39%), Gaps = 92/398 (23%)
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
+S +S YA G +QAL LF M A+ +A + L C
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKS--------------C 58
Query: 193 DSASLSALISGLVRNGEL--DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
+A+ ++ G V + + + + C L+ YG+ V A
Sbjct: 59 -AAAFRPVLGGSVHAHSVKSNFLSNPFVGCA---------------LLDMYGKCLSVSHA 102
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-DTCAW 309
R+LFD IP +RN V WN+M+ Y G + A EL+++M + ++
Sbjct: 103 RKLFDEIP-------------QRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF 149
Query: 310 NTMISGYVQISD-----MEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDF----- 359
N +I G V D +E K+ + P+ ++ +++S + IG ++ K+
Sbjct: 150 NAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAF 209
Query: 360 ------------------------------FERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
F+ M +++++W+SLI+ Y + D + A++
Sbjct: 210 RNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALK 269
Query: 390 LFSQMQLEGEKPDRHTLSSVLSVCT--GLVD--LYLGKQMHQLVTKTVIPDLPINNSLIT 445
F +M+L PD +VL C+ GL D L K+M D + L+
Sbjct: 270 TFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDH--YSCLVD 327
Query: 446 MYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+ SR G EA V M TW A++G ++G
Sbjct: 328 VLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 136/307 (44%), Gaps = 32/307 (10%)
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER-NAVSSNAVITGFLL 175
V RKLFDE+P+R+ V WN +IS Y G++ +A++L++AM N S NA+I G +
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 176 NGDVD-SAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL 230
D A+ F+++M E + +L AL+S G + I H
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHP- 217
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
Q + L+ YG+ G + + +FD + ED R+VV+W+S++ Y GD
Sbjct: 218 -QLKSGLVEAYGRCGSIVYVQLVFDSM--------ED-----RDVVAWSSLISAYALHGD 263
Query: 291 IVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDAL-----SWN 341
SA + F M D A+ ++ +EA FK M L ++
Sbjct: 264 AESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYS 323
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLI-SWNSLI-AGYDKNEDYKGAIELFSQMQLEGE 399
++ +++G + A + MP+K +W +L+ A + E I + +E E
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPE 383
Query: 400 KPDRHTL 406
P + L
Sbjct: 384 NPANYVL 390
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 143/317 (45%), Gaps = 45/317 (14%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMK-HRNTVTWNTLISGHV-----KRREIAKARQLFDE 92
WN ISH G++ EA +++M N ++N +I G V R I R++ +
Sbjct: 117 WNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEF 176
Query: 93 MPQRDIVSWNLIISGYFSCCGSKFVEE-----GRKLFDEMPERDCVSWNTVISGYAKNGR 147
+ ++++ ++S + + ++E R L + P+ + ++ Y + G
Sbjct: 177 RFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLK----SGLVEAYGRCGS 232
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM------PECDSASLSALI 201
+ +FD+M +R+ V+ +++I+ + L+GD +SA+ F+ M P+ D A L+ L
Sbjct: 233 IVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPD-DIAFLNVLK 291
Query: 202 SGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ 261
+ + L A + + GD G Y+ L+ + G+ EEA ++ +P
Sbjct: 292 A--CSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPE-- 347
Query: 262 GDGKEDGRRFRRNVVSWNSMMMCYVKVGDI----VSARELFDSMGERDTCAWNTMISG-- 315
+ +W +++ G+I ++AREL M E + A N ++ G
Sbjct: 348 ----------KPTAKTWGALLGACRNYGEIELAEIAARELL--MVEPENPA-NYVLLGKI 394
Query: 316 YVQISDMEEASKLFKEM 332
Y+ + EEA +L +M
Sbjct: 395 YMSVGRQEEAERLRLKM 411
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 297/605 (49%), Gaps = 57/605 (9%)
Query: 78 VKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERD-CVSWN 136
V+ +I +A LF P ++ S + + +C + + +G L M C S N
Sbjct: 37 VRSGDIRRAVSLFYSAPV-ELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 137 TVISG-----YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM-P 190
+++ YAK G + A ++FD MPERN VS A+ITG++ G+ F M
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 191 EC--DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQS---G 245
C + +LS++++ R G+ L+ G H + N +I+ YG+
Sbjct: 156 HCFPNEFTLSSVLTS-CRYEPGKQVHGLALKLG-----LHCSIYVANAVISMYGRCHDGA 209
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV-----KVGDIVSARELFDS 300
EA +F+ I +F+ N+V+WNSM+ + K V R D
Sbjct: 210 AAYEAWTVFEAI------------KFK-NLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDG 256
Query: 301 MGERDTCAWNTMISGYVQISDM--EEASKLFKEMPSPDALS--------WNSIISGFAQI 350
+G N S Y + SD+ E SK ++ S S ++I ++++
Sbjct: 257 VGFDRATLLNICSSLY-KSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM 315
Query: 351 GD--LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ K F E +++++WN +I + D + AI LF Q++ E PD +T SS
Sbjct: 316 LEDYTDCYKLFMEMSHCRDIVAWNGIITAF-AVYDPERAIHLFGQLRQEKLSPDWYTFSS 374
Query: 409 VLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK 467
VL C GLV +H Q++ + D +NNSLI Y++CG++ VF++M +
Sbjct: 375 VLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD-SR 433
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
DV++WN+M+ Y+ HG L +F++M I+P TFI++L+AC+HAG VEEG R F
Sbjct: 434 DVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIF 490
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
SM P++ H+A +D+L R + EA ++I MP+ PD VW ALLGSCR HGN
Sbjct: 491 RSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
Query: 588 VELAQVAAQALISL-EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV 646
L ++AA L L EP +S Y+ + N+Y +++A ME V+K+ SW
Sbjct: 551 TRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWT 610
Query: 647 DSSNR 651
+ N+
Sbjct: 611 EIGNK 615
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 146/342 (42%), Gaps = 42/342 (12%)
Query: 53 SEARTFFDSMKH-RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVS-WNLIISGYFS 110
++ F M H R+ V WN +I+ + +A LF ++ Q + W S +
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITA-FAVYDPERAIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 111 CCGSKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
C G + ++ + D V N++I YAK G +D +++FD M R+ VS
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438
Query: 167 NAVITGFLLNGDVDSAVGFFKRMP-ECDSASLSALISGLVRNGELDMAAGILLECGDGDE 225
N+++ + L+G VDS + F++M DSA+ AL+S G ++ I + E
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPE 498
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
L Y +I ++ + EA + ++P D + V W +++
Sbjct: 499 TLPQL-NHYACVIDMLSRAERFAEAEEVIKQMPMDP------------DAVVWIALLGSC 545
Query: 286 VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM-------EEASKLFKEMPS---- 334
K G+ + D + E N+M Y+Q+S++ EA+ KEM +
Sbjct: 546 RKHGNTRLGKLAADKLKELVE-PTNSM--SYIQMSNIYNAEGSFNEANLSIKEMETWRVR 602
Query: 335 --PDALSWNSI---ISGFAQIGDLKVAKDFFERMPQKNLISW 371
PD LSW I + FA G + K+ R K LISW
Sbjct: 603 KEPD-LSWTEIGNKVHEFASGGRHRPDKEAVYR-ELKRLISW 642
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/597 (29%), Positives = 280/597 (46%), Gaps = 79/597 (13%)
Query: 81 REIAKARQLFDEMPQ----RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWN 136
R + + QL M + R+++ + +I +C + + R +F+ + WN
Sbjct: 17 RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWN 76
Query: 137 TVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL---NGDVDSAVGFFKRMPECD 193
++I GY+ + D+AL + M R S + ++L +G D G
Sbjct: 77 SMIRGYSNSPNPDKALIFYQEML-RKGYSPDYFTFPYVLKACSGLRDIQFG--------- 126
Query: 194 SASLSALISGLVRNG-ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARR 252
S + +V+ G E++M L+ Y G+V R
Sbjct: 127 ----SCVHGFVVKTGFEVNMYVS-------------------TCLLHMYMCCGEVNYGLR 163
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTM 312
+F+ IP + NVV+W S++ +V A E F M A T+
Sbjct: 164 VFEDIP-------------QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETI 210
Query: 313 I-------------------SGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDL 353
+ G++Q + F+ + + S+I +A+ GDL
Sbjct: 211 MVDLLVACGRCKDIVTGKWFHGFLQGLGFD---PYFQSKVGFNVILATSLIDMYAKCGDL 267
Query: 354 KVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
+ A+ F+ MP++ L+SWNS+I GY +N D + A+ +F M G PD+ T SV+
Sbjct: 268 RTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRAS 327
Query: 414 TGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITW 472
LG+ +H V+KT + D I +L+ MY++ G A F +++ KD I W
Sbjct: 328 MIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAW 386
Query: 473 NAMIGGYASHGLAVDALELFKQMK-RLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI 531
+I G ASHG +AL +F++M+ + P IT++ VL AC+H GLVEEG+R F M
Sbjct: 387 TVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMR 446
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+ +G+EP VEH+ VDIL R G+ +EA L+ +MPVKP+ +WGALL C +H N+EL
Sbjct: 447 DLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELT 506
Query: 592 QVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
+ E SG YVLL N+YA W D + +R M+ K V K G+S V++
Sbjct: 507 DRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 215/527 (40%), Gaps = 102/527 (19%)
Query: 49 TGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ------------- 95
T LS AR+ F+S+ + WN++I G+ KA + EM +
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 96 -------RDI-----VSWNLIISGY-------------FSCCGSKFVEEGRKLFDEMPER 130
RDI V ++ +G+ + CCG V G ++F+++P+
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGE--VNYGLRVFEDIPQW 171
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
+ V+W ++ISG+ N R A++ F M + N V +N I VD V +
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREM-QSNGVKANETIM-------VDLLVACGRCKD 223
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
+ GL + G +++ A +LI Y + G + A
Sbjct: 224 IVTGKWFHGFLQGLGFDPYFQSKVGF------------NVILA-TSLIDMYAKCGDLRTA 270
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN 310
R LFD +P R +VSWNS++ Y + GD A +F M +
Sbjct: 271 RYLFDGMP-------------ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDK 317
Query: 311 TMISGYVQISDMEEASKLFKEMPS--------PDALSWNSIISGFAQIGDLKVAKDFFER 362
++ S ++ S+L + + + DA ++++ +A+ GD + AK FE
Sbjct: 318 VTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFED 377
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHTLSSVLSVCT--GLVD- 418
+ +K+ I+W +I G + A+ +F +MQ +G PD T VL C+ GLV+
Sbjct: 378 LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEE 437
Query: 419 --LYLG--KQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
Y + +H L P + ++ + SR G EA + M +V W A
Sbjct: 438 GQRYFAEMRDLHGLE-----PTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGA 492
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYI---TFISVLNACAHAG 518
++ G H + LEL +++ + P + ++ + N A AG
Sbjct: 493 LLNGCDIH----ENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAG 535
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 27/229 (11%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G L AR FD M R V+WN++I+G+ + + +A +F +M I +
Sbjct: 263 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT--- 319
Query: 108 YFSCCGSKFVEEGRKLFDEMPE--------RDCVSWNTVISGYAKNGRMDQALKLFDAMP 159
+ S + ++ +L + +D +++ YAK G + A K F+ +
Sbjct: 320 FLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE 379
Query: 160 ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSAS------LSALIS----GLVRNGE 209
+++ ++ VI G +G + A+ F+RM E +A+ L L + GLV G+
Sbjct: 380 KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQ 439
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
A L G V+ Y ++ ++G+ EEA RL +P
Sbjct: 440 RYFAEMRDL------HGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/634 (28%), Positives = 310/634 (48%), Gaps = 71/634 (11%)
Query: 67 TVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKF--VEEGRKLF 124
V+ N L++ + K + +AR +FDEM +R++ SWN +I+ Y KF V+E R+LF
Sbjct: 23 AVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV-----KFNNVKEARELF 77
Query: 125 D-EMPERDCVSWNTVISGYAK-NGRMDQALKLFDAMPER-------------NAVSSNAV 169
+ + ERD +++NT++SG+AK +G +A+++F M + V +A
Sbjct: 78 ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAK 137
Query: 170 IT---------GFLLNGDVD-------------SAVGFFKRMPE---------CDSASLS 198
+T G L+ D S G FK + DS + +
Sbjct: 138 LTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARN 197
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
A+I+ R G++D A + + ++ ++NTLIAGY Q+G EEA ++ +
Sbjct: 198 AMIAAYCREGDIDKALSVFWRNPELND-----TISWNTLIAGYAQNGYEEEALKM--AVS 250
Query: 259 NDQGDGKEDGRRFRR--NVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGY 316
++ K D F NV+S + +K+G V AR L + + + ++ Y
Sbjct: 251 MEENGLKWDEHSFGAVLNVLS----SLKSLKIGKEVHARVLKNG-SYSNKFVSSGIVDVY 305
Query: 317 VQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIA 376
+ +M+ A + S +S+I G++ G + AK F+ + +KNL+ W ++
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFL 365
Query: 377 GYDKNEDYKGAIELF-SQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VI 434
GY +EL + + E PD + SVL C+ + GK++H +T ++
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL 425
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
D + + + MYS+CG + A +F+ F +D + +NAMI G A HG + + F+
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHHGHEAKSFQHFED 484
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
M P ITF+++L+AC H GLV EG + F SMI Y I P H+ +D+ G+
Sbjct: 485 MTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAY 544
Query: 555 QLQEAMDLINSM-PVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLY 613
+L +A++L+ + V+ D + GA L +C + N EL + + L+ +E + Y+ +
Sbjct: 545 RLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIA 604
Query: 614 NMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
N YA+ WD+ +R+R M K ++ +G SW +
Sbjct: 605 NAYASSGRWDEMQRIRHQMRGKELEIFSGCSWAN 638
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 248/518 (47%), Gaps = 74/518 (14%)
Query: 132 CVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE 191
C NT+++ Y K G AL++FD MP R+ ++ +V+T LN
Sbjct: 38 CPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTA--LN--------------- 80
Query: 192 CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEAR 251
A +SG + + + L D ++ L+ G ++ R
Sbjct: 81 ------QANLSGKTLSVFSSVGSSSGLRPDDF---------VFSALVKACANLGSIDHGR 125
Query: 252 RLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNT 311
++ + + + V +S++ Y K G + SA+ +FDS+ ++T +W
Sbjct: 126 QVHCHFIVSE---------YANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTA 176
Query: 312 MISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISW 371
M+SGY + EEA +LF+ +P + SW ++ISGF Q G A F M ++ +
Sbjct: 177 MVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL 236
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK 431
+ L+ LSS++ C L G+Q+H LV
Sbjct: 237 DPLV------------------------------LSSIVGACANLAASIAGRQVHGLVIA 266
Query: 432 TVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
+ I+N+LI MY++C + A +F+ M+ ++DV++W ++I G A HG A AL
Sbjct: 267 LGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR-HRDVVSWTSLIVGMAQHGQAEKALA 325
Query: 491 LFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDIL 550
L+ M + P +TF+ ++ AC+H G VE+GR F SM DYGI P ++H+ +D+L
Sbjct: 326 LYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLL 385
Query: 551 GRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA-QVAAQALISLEPESSGPY 609
GR G L EA +LI++MP PD+ W ALL +C+ G ++ ++A + S + + Y
Sbjct: 386 GRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTY 445
Query: 610 VLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+LL N+YA+ LW R + E V+K G+S V+
Sbjct: 446 ILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 200/501 (39%), Gaps = 93/501 (18%)
Query: 79 KRREIAKARQLFDEMPQRDIVSW----NLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS 134
+ R + A+ L + + IV N +++ Y C + ++FDEMP RD ++
Sbjct: 15 RNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAA---SHALQVFDEMPHRDHIA 71
Query: 135 WNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDS 194
W +V++ + A ++G L+ R D
Sbjct: 72 WASVLTAL-----------------------NQANLSGKTLSVFSSVGSSSGLRP---DD 105
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
SAL+ G +D + + ++V+ ++L+ Y + G + A+ +F
Sbjct: 106 FVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVF 163
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
D I R + N +SW +M+ Y K G A ELF + ++ +W +IS
Sbjct: 164 DSI------------RVK-NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALIS 210
Query: 315 GYVQISDMEEASKLFKEMP-------SPDALS---------------------------- 339
G+VQ EA +F EM P LS
Sbjct: 211 GFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFD 270
Query: 340 -----WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
N++I +A+ D+ AKD F RM ++++SW SLI G ++ + A+ L+ M
Sbjct: 271 SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Query: 395 QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGA 452
G KP+ T ++ C+ + + G+++ Q +TK + P L L+ + R G
Sbjct: 331 VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGL 390
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMK---RLKIHPTYITFIS 509
+ EA + + M F D TW A++ G + + + +LK TYI +
Sbjct: 391 LDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSN 450
Query: 510 VLNACAHAGLVEEGRRQFNSM 530
+ + + G V E RR+ M
Sbjct: 451 IYASASLWGKVSEARRKLGEM 471
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 155/387 (40%), Gaps = 98/387 (25%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRR-------------------------- 81
+ G S A FD M HR+ + W ++++ +
Sbjct: 50 KCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFS 109
Query: 82 EIAKARQLFDEMPQRDIVSWNLIISGY-------------FSCCGSKFVEEGRKLFDEMP 128
+ KA + V + I+S Y ++ CG + + +FD +
Sbjct: 110 ALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCG--LLNSAKAVFDSIR 167
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
++ +SW ++SGYAK+GR ++AL+LF +P +N S A+I+GF+ +G A F
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 189 M---------PECDS------ASLSALISG----------------LVRNGELDMAAGIL 217
M P S A+L+A I+G + N +DM A
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYA--- 284
Query: 218 LECGDGDEGK-------HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
+C D K H V ++ +LI G Q G+ E+A L+D D G
Sbjct: 285 -KCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD-------DMVSHG-- 334
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISGYVQISD-MEEA 325
+ N V++ ++ VG + RELF SM G R + T + + S ++EA
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 326 SKLFKEMP-SPDALSWNSIISGFAQIG 351
L MP PD +W +++S + G
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQG 421
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 150/347 (43%), Gaps = 58/347 (16%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G L+ A+ FDS++ +NT++W ++SG+ K +A +LF +P +++ SW +ISG
Sbjct: 152 KCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISG 211
Query: 108 YFSCCGSKFVEEGRKL-----FDEM-PER----DCVSWNTVISGYAK-----NGRMDQAL 152
FV+ G+ L F EM ER D + ++++ A GR L
Sbjct: 212 --------FVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 153 KL---FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGE 209
+ FD+ SNA+I + DV +A F RM D S ++LI G+ ++G+
Sbjct: 264 VIALGFDSC----VFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQ 319
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
+ A + + +++ + LI G VE+ R LF + D G
Sbjct: 320 AEKALALYDDMVSHGVKPNEV--TFVGLIYACSHVGFVEKGRELFQSMTKDYG------- 370
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG-ERDTCAWNTMISGY---------VQI 319
R ++ + ++ + G + A L +M D W ++S ++I
Sbjct: 371 -IRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 320 SDMEEASKLFKEMPSPDALS--------WNSIISGFAQIGDLKVAKD 358
+D +S K+ + LS W + ++G+++V KD
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKD 476
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 85/173 (49%), Gaps = 7/173 (4%)
Query: 410 LSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
L +C L K +H + K ++ P+ N+L+ +Y +CGA A VF+EM ++D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP-HRD 68
Query: 469 VITWNAMIGGYASHGLAVDAL-ELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR-Q 526
I W +++ L+ L + P F +++ ACA+ G ++ GR+
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
+ ++++Y + V+ +S VD+ + G L A + +S+ VK + W A++
Sbjct: 129 CHFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMV 178
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 192/323 (59%), Gaps = 8/323 (2%)
Query: 329 FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAI 388
F E + D +++ +A G L+ A+ FER+ + +L +WN+L+A Y +E+
Sbjct: 142 FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDE 201
Query: 389 E---LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLI 444
E LF +MQ+ +P+ +L +++ C L + G H V K + + + SLI
Sbjct: 202 EVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLI 258
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
+YS+CG + A VF+EM +DV +NAMI G A HG + +EL+K + + P
Sbjct: 259 DLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDS 317
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
TF+ ++AC+H+GLV+EG + FNSM YGIEP+VEH+ VD+LGR G+L+EA + I
Sbjct: 318 ATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIK 377
Query: 565 SMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDD 624
MPVKP+ +W + LGS + HG+ E ++A + L+ LE E+SG YVLL N+YA + W D
Sbjct: 378 KMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTD 437
Query: 625 AERVRVLMEEKNVKKQTGYSWVD 647
E+ R LM++ V K G S ++
Sbjct: 438 VEKTRELMKDHRVNKSPGISTLN 460
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 228 HD-LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV 286
HD VQA L+ Y GK+ EAR LF+RI ++ +WN+++ Y
Sbjct: 148 HDRFVQA--ALVGFYANCGKLREARSLFERIREP-------------DLATWNTLLAAYA 192
Query: 287 KVGDIVSARE---LFDSMGER-DTCAWNTMISGYVQISDMEEA----SKLFKEMPSPDAL 338
+I S E LF M R + + +I + + + K + +
Sbjct: 193 NSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 339 SWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
S+I +++ G L A+ F+ M Q+++ +N++I G + + IEL+ + +G
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQG 312
Query: 399 EKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEA 456
PD T +S C +GLVD L + P + L+ + R G + EA
Sbjct: 313 LVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 457 CTVFNEMKFYKDVITWNAMIGGYASHG 483
+M + W + +G +HG
Sbjct: 373 EECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 44/396 (11%)
Query: 42 KISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAK---ARQLFDEM--PQR 96
K+ HL T LS A + + + + +NTLIS V + A L+D++ +
Sbjct: 46 KLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRS 105
Query: 97 DIVSWN-LIISGYFSCCG--SKFVEEGRKL------FDEMPERDCVSWNTVISGYAKNGR 147
+ V N F G +++ GR L F E D ++ YA G+
Sbjct: 106 NFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK 165
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS---AVGFFKRMP-ECDSASLSALISG 203
+ +A LF+ + E + + N ++ + + ++DS + F RM + SL ALI
Sbjct: 166 LREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKS 225
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
GE + + + V +LI Y + G + AR++FD +
Sbjct: 226 CANLGEFVRGVWAHVYVLKNNLTLNQFVGT--SLIDLYSKCGCLSFARKVFDEMS----- 278
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQI 319
+R+V +N+M+ G EL+ S+ + D+ + IS
Sbjct: 279 --------QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
Query: 320 SDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK-NLISWNS 373
++E ++F M + P + ++ + G L+ A++ ++MP K N W S
Sbjct: 331 GLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRS 390
Query: 374 LIAGYDKNEDY-KGAIELFSQMQLEGEKPDRHTLSS 408
+ + D+ +G I L + LE E + L S
Sbjct: 391 FLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLS 426
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/434 (30%), Positives = 236/434 (54%), Gaps = 29/434 (6%)
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRI------PNDQGDGKEDGRRFRRNVVSWNSMM 282
D++ A +I + + + EA + F R+ PN+ G G V +
Sbjct: 57 DVISA-TAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQL 115
Query: 283 MCY-VKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWN 341
CY +K+G A +F + +++ YV++S + +A + F + P+ +S
Sbjct: 116 HCYALKMG---LASNVF---------VGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSIT 163
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK- 400
++ISG+ + + + A F MP++++++WN++I G+ + + A+ F M EG
Sbjct: 164 NLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI 223
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP--DLPINNSLITMYSRCGAIGEACT 458
P+ T ++ + + GK +H K + ++ + NSLI+ YS+CG + ++
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLL 283
Query: 459 VFNEMKF-YKDVITWNAMIGGYASHGLAVDALELFKQM-KRLKIHPTYITFISVLNACAH 516
FN+++ +++++WN+MI GYA +G +A+ +F++M K + P +T + VL AC H
Sbjct: 284 AFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNH 343
Query: 517 AGLVEEGRRQFNSMINDYGIEP---RVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA 573
AGL++EG FN +NDY +P +EH+A VD+L R G+ +EA +LI SMP+ P
Sbjct: 344 AGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 574 VWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLME 633
W ALLG C++H N LA++AA ++ L+P YV+L N Y+ +E W + +R M+
Sbjct: 403 FWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMK 462
Query: 634 EKNVKKQTGYSWVD 647
E +K+ TG SW++
Sbjct: 463 ETGLKRFTGCSWIE 476
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 161/385 (41%), Gaps = 67/385 (17%)
Query: 150 QALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLV---R 206
A K+FD +PE + +S+ AVI F+ A FKR+ C + G V
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL-CLGIRPNEFTFGTVIGSS 103
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
D+ G L C G V + ++ Y + + +ARR FD D D
Sbjct: 104 TTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD----DTRDP-- 157
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
NVVS +++ Y+K + A LF +M ER WN +I G+ Q EEA
Sbjct: 158 -------NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 327 KLFKEM-------PS----PDALS------------------------------WNSIIS 345
F +M P+ P A++ WNS+IS
Sbjct: 211 NTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 270
Query: 346 GFAQIGDLKVAKDFFERM--PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE-KPD 402
+++ G+++ + F ++ Q+N++SWNS+I GY N + A+ +F +M + +P+
Sbjct: 271 FYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPN 330
Query: 403 RHTLSSVLSVC--TGLVD---LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
T+ VL C GL+ +Y K ++ ++ +L ++ M SR G EA
Sbjct: 331 NVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLL-ELEHYACMVDMLSRSGRFKEAE 389
Query: 458 TVFNEMKFYKDVITWNAMIGGYASH 482
+ M + W A++GG H
Sbjct: 390 ELIKSMPLDPGIGFWKALLGGCQIH 414
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 151/362 (41%), Gaps = 43/362 (11%)
Query: 43 ISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
I ++ R EA F + N T+ T+I R++ +QL + +
Sbjct: 65 IGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGL 124
Query: 99 VSWNLIISGYFSC-CGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDA 157
S + S +C + + R+ FD+ + + VS +ISGY K ++AL LF A
Sbjct: 125 ASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRA 184
Query: 158 MPERNAVSSNAVITGFLLNGDVDSAVGFFKRM--------PECDSASLSALISGLVRNGE 209
MPER+ V+ NAVI GF G + AV F M E IS + +G
Sbjct: 185 MPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG- 243
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
A + C GK V +N+LI+ Y + G +E++ F+++ +Q
Sbjct: 244 ---AGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQ-------- 292
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMI----------SGYVQI 319
RN+VSWNSM+ Y G A +F+ M + N + +G +Q
Sbjct: 293 ---RNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQE 349
Query: 320 SDMEEASKLFKEMPSPDALS---WNSIISGFAQIGDLKVAKDFFERMPQKNLIS-WNSLI 375
M +K + P+ L + ++ ++ G K A++ + MP I W +L+
Sbjct: 350 GYM-YFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALL 408
Query: 376 AG 377
G
Sbjct: 409 GG 410
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 146/344 (42%), Gaps = 59/344 (17%)
Query: 45 HLIRTGRLSEARTFFDSMKHRNTVTWNTL--ISGHVKRREIAKARQLFDEMPQRDIVSWN 102
H+I + R+ R + S T + N++ + H+ I A ++FDE+P+ D++S
Sbjct: 3 HMILSQRVILLRKYHSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISAT 62
Query: 103 LIISGYFS---------------CCG-----------------SKFVEEGRKLFDEMPER 130
+I + C G S+ V+ G++L +
Sbjct: 63 AVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKM 122
Query: 131 DCVS----WNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFF 186
S + V++ Y K + A + FD + N VS +I+G+L + + A+ F
Sbjct: 123 GLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLF 182
Query: 187 KRMPECDSASLSALISGLVRNGELDMAAGILLE-CGDG----DEGKHDLVQAYNTLIAGY 241
+ MPE + +A+I G + G + A ++ +G +E + IA +
Sbjct: 183 RAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASH 242
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
G +GK A + K G+RF NV WNS++ Y K G++ + F+ +
Sbjct: 243 G-AGKSIHACAI-----------KFLGKRF--NVFVWNSLISFYSKCGNMEDSLLAFNKL 288
Query: 302 GE--RDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSI 343
E R+ +WN+MI GY EEA +F++M L N++
Sbjct: 289 EEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNV 332
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 46/241 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWN-----------TLISGHVKRREIAKAR 87
WN I +TGR EA F M V N + I+ H + I
Sbjct: 193 WNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 88 QLFDEMPQR-DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPE--RDCVSWNTVISGYAK 144
F + +R ++ WN +IS ++S CG+ +E+ F+++ E R+ VSWN++I GYA
Sbjct: 253 IKF--LGKRFNVFVWNSLIS-FYSKCGN--MEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 145 NGRMDQALKLFDAM-PERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISG 203
NGR ++A+ +F+ M + N +N I G L C+ A G
Sbjct: 308 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF---------------ACNHA-------G 345
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
L++ G + + D D+ ++ Y ++ +SG+ +EA L +P D G
Sbjct: 346 LIQEGYMYFNKAV----NDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 264 G 264
G
Sbjct: 402 G 402
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 40/263 (15%)
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
++ A F+ +P+ ++IS ++I + K + A + F ++ G +P+ T +V+
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 413 CTGLVDLYLGKQMHQLVTK--------------------------------TVIPDLPIN 440
T D+ LGKQ+H K T P++
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 441 NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
+LI+ Y + EA ++F M + V+TWNA+IGG++ G +A+ F M R +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMP-ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 501 H-PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEA 559
P TF + A ++ G+ I G V + S + + G ++++
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDS 281
Query: 560 MDLINSMP------VKPDKAVWG 576
+ N + V + +WG
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWG 304
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 225 bits (574), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/380 (31%), Positives = 209/380 (55%), Gaps = 11/380 (2%)
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKL----F 329
+N+M+ YV V A ++ M +R D + ++ ++ + E ++ F
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 330 KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE 389
K D NS+I+ + + G+++++ FE++ K SW+S+++ + +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 390 LFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMY 447
LF M E K + + S L C L LG +H + + + ++ + SL+ MY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
+CG + +A +F +M+ ++ +T++AMI G A HG AL +F +M + + P ++ +
Sbjct: 280 VKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVY 338
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
+SVLNAC+H+GLV+EGRR F M+ + +EP EH+ VD+LGR G L+EA++ I S+P
Sbjct: 339 VSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIP 398
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAER 627
++ + +W L CRV N+EL Q+AAQ L+ L + G Y+L+ N+Y+ ++WDD R
Sbjct: 399 IEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVAR 458
Query: 628 VRVLMEEKNVKKQTGYSWVD 647
R + K +K+ G+S V+
Sbjct: 459 TRTEIAIKGLKQTPGFSIVE 478
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 8/280 (2%)
Query: 353 LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ A F + +N++I GY ++ A+ +++M G +PD T +L
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 413 CTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVIT 471
CT L + GKQ+H V K + D+ + NSLI MY RCG + + VF +++ K +
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLE-SKTAAS 200
Query: 472 WNAMIGGYASHGLAVDALELFKQM-KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
W++M+ A G+ + L LF+ M + +S L ACA+ G + G +
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVEL 590
+ + E + S VD+ + G L +A+ + M K + + A++ +HG E
Sbjct: 261 LRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGES 318
Query: 591 AQVAAQALIS--LEPESSGPYVLLYNMYANLELWDDAERV 628
A +I LEP+ YV + N ++ L + RV
Sbjct: 319 ALRMFSKMIKEGLEPDHV-VYVSVLNACSHSGLVKEGRRV 357
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 23/240 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N I+ R G + + F+ ++ + +W++++S ++ LF M +
Sbjct: 171 NSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNL 230
Query: 100 SWNL--IISGYFSCCGSKFVEEGRK----LFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
++S +C + + G L + E + + +++ Y K G +D+AL
Sbjct: 231 KAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALH 290
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALI-----SGL 204
+F M +RN ++ +A+I+G L+G+ +SA+ F +M E D +++ SGL
Sbjct: 291 IFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGL 350
Query: 205 VRNGELDMAAGILLECGDGDEGK-HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
V+ G A + EGK + Y L+ G++G +EEA IP ++ D
Sbjct: 351 VKEGRRVFAEML-------KEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND 403
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 165/392 (42%), Gaps = 40/392 (10%)
Query: 42 KISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSW 101
K +H ++ A + F + T +NT+I G+V +A ++EM QR
Sbjct: 72 KCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPD 131
Query: 102 NLIISGYFSCCGS-KFVEEGRKLFDEM----PERDCVSWNTVISGYAKNGRMDQALKLFD 156
N C K + EG+++ ++ E D N++I+ Y + G M+ + +F+
Sbjct: 132 NFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFE 191
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLV-------RNGE 209
+ + A S +++++ G + F+ M C +L A SG+V G
Sbjct: 192 KLESKTAASWSSMVSARAGMGMWSECLLLFRGM--CSETNLKAEESGMVSALLACANTGA 249
Query: 210 LDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGR 269
L++ I + +VQ +L+ Y + G +++A +F ++
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQT--SLVDMYVKCGCLDKALHIFQKME----------- 296
Query: 270 RFRRNVVSWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEA 325
+RN +++++M+ G+ SA +F M E D + ++++ ++E
Sbjct: 297 --KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEG 354
Query: 326 SKLFKEM-----PSPDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYD 379
++F EM P A + ++ + G L+ A + + +P +KN + W + ++
Sbjct: 355 RRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCR 414
Query: 380 KNEDYK-GAIELFSQMQLEGEKPDRHTLSSVL 410
++ + G I ++L P + L S L
Sbjct: 415 VRQNIELGQIAAQELLKLSSHNPGDYLLISNL 446
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 228/422 (54%), Gaps = 22/422 (5%)
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
YNTLI Y +G+ + + LF + + N +++ S++ +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHML---------ASHVQPNNLTFPSLIKAACSSFSVSY 104
Query: 294 ARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQ 349
L +R D + + Y ++ D+E + K+F ++ +P ++ NS++ +
Sbjct: 105 GVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR 164
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK----PDRHT 405
G++ A ++F+RMP +++SW ++I G+ K + A+ +F +M ++ E+ P+ T
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEAT 223
Query: 406 LSSVLSVCTGLVD--LYLGKQMHQLV-TKTVIPDLPINNSLITMYSRCGAIGEACTVFNE 462
SVLS C + LGKQ+H V +K +I + +L+ MY + G + A T+F++
Sbjct: 224 FVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQ 283
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEE 522
++ K V WNA+I AS+G ALE+F+ MK +HP IT +++L ACA + LV+
Sbjct: 284 IR-DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 523 GRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSC 582
G + F+S+ ++Y I P EH+ VD++GR G L +A + I S+P +PD +V GALLG+C
Sbjct: 343 GIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGAC 402
Query: 583 RVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTG 642
++H N EL + LI L+P+ G YV L A W +AE++R M E ++K
Sbjct: 403 KIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPA 462
Query: 643 YS 644
YS
Sbjct: 463 YS 464
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 129/325 (39%), Gaps = 56/325 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSM----KHRNTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I + TG + F M N +T+ +LI ++ L +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 95 QRDIVSWNLIISGYFSCCGSKF------VEEGRKLFDEMPERDCVSWNTVISGYAKNGRM 148
+R + W+ + F +F +E RK+FD++ V+ N+++ +NG M
Sbjct: 114 KRGFL-WDPFVQTSFV----RFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG 208
D A + F MP + VS VI GF G A+ F M + + A ++ + V
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV--- 225
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
+L C + D+G L + I GY S ++ L + + G
Sbjct: 226 ------SVLSSCANFDQGGIRLGKQ----IHGYVMSKEIILTTTLGTALLDMYG------ 269
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
K GD+ A +FD + ++ CAWN +IS ++A ++
Sbjct: 270 ------------------KAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEM 311
Query: 329 FKEMPS----PDALSWNSIISGFAQ 349
F+ M S P+ ++ +I++ A+
Sbjct: 312 FEMMKSSYVHPNGITLLAILTACAR 336
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 239/468 (51%), Gaps = 65/468 (13%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N L Y SG++ A++LFD IP + D V W +++ + + G +V++
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDN-----------VDWTTLLSSFSRYGLLVNS 95
Query: 295 RELFDSMGER-------------DTCA--------------------------WNTMISG 315
+LF M + CA N ++
Sbjct: 96 MKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDM 155
Query: 316 YVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLI 375
Y + + E ++F+E+ +SW ++ + L+ ++ F MP++N ++W ++
Sbjct: 156 YGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMV 215
Query: 376 AGYDKNEDYKGAIELFSQMQLE-GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI 434
AGY + +EL ++M G + TL S+LS C +L +G+ +H K +
Sbjct: 216 AGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEM 275
Query: 435 --------PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAV 486
D+ + +L+ MY++CG I + VF M+ ++V+TWNA+ G A HG
Sbjct: 276 MMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGR 334
Query: 487 DALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
+++F QM R ++ P +TF +VL+AC+H+G+V+EG R F+S+ YG+EP+V+H+A
Sbjct: 335 MVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACM 392
Query: 547 VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
VD+LGR G ++EA L+ MPV P++ V G+LLGSC VHG VE+A+ + LI + P ++
Sbjct: 393 VDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNT 452
Query: 607 GPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWV---DSSNR 651
+L+ NMY D A+ +R + ++ ++K G S + DS +R
Sbjct: 453 EYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHR 500
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 180/432 (41%), Gaps = 105/432 (24%)
Query: 120 GRKLFDEMP--ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG 177
+KLFDE+P E+D V W T++S +++ G + ++KLF M +
Sbjct: 62 AQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRV-------------- 107
Query: 178 DVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL---VQAY 234
E D S+ L + +L A + G G K + V+
Sbjct: 108 -------------EIDDVSVVCLFGVCAKLEDLGFA-----QQGHGVAVKMGVLTSVKVC 149
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N L+ YG+ G V E +R+F+ + ++VVSW ++ VK +
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEE-------------KSVVSWTVVLDTVVKWEGLERG 196
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLF------------------------- 329
RE+F M ER+ AW M++GY+ E +L
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 330 ----------------KEMPSPDALSWNSIISG------FAQIGDLKVAKDFFERMPQKN 367
KEM + S++ ++ G +A+ G++ + + F M ++N
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 368 LISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQM 425
+++WN+L +G + + I++F QM E KPD T ++VLS C +G+VD +
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW-RCF 374
Query: 426 HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
H L + P + ++ + R G I EA + EM + + +++G + HG
Sbjct: 375 HSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG-- 432
Query: 486 VDALELFKQMKR 497
+E+ +++KR
Sbjct: 433 --KVEIAERIKR 442
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 71/269 (26%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G +SE + F+ ++ ++ V+W ++ VK + + R++F EMP+R+ V+W ++++G
Sbjct: 158 KCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAG 217
Query: 108 YFSCCGSKFVEEGRKLFDEMPER------------------------------------- 130
Y G+ F E +L EM R
Sbjct: 218 YL---GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKE 274
Query: 131 ----------DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
D + ++ YAK G +D ++ +F M +RN V+ NA+ +G ++G
Sbjct: 275 MMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGR 334
Query: 181 SAVGFFKRM---PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL------- 230
+ F +M + D + +A++S +G +D +G H L
Sbjct: 335 MVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVD----------EGWRCFHSLRFYGLEP 384
Query: 231 -VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
V Y ++ G++G +EEA L +P
Sbjct: 385 KVDHYACMVDLLGRAGLIEEAEILMREMP 413
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 114/281 (40%), Gaps = 61/281 (21%)
Query: 49 TGRLSEARTFFDS--MKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS 106
+G + A+ FD + ++ V W TL+S + + + +LF EM ++ + ++ +
Sbjct: 56 SGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVV 115
Query: 107 GYFSCCGS------------------------------------KFVEEGRKLFDEMPER 130
F C V E +++F+E+ E+
Sbjct: 116 CLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK 175
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
VSW V+ K +++ ++F MPERNAV+ ++ G+L G + M
Sbjct: 176 SVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMV 235
Query: 191 -EC----DSASLSALISGLVRNGELDMAAGILL-----ECGDGDEGKHDLVQAYNTLIAG 240
C + +L +++S ++G L + + + E G+E +D V L+
Sbjct: 236 FRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDM 295
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
Y + G ++ + +F + +RNVV+WN++
Sbjct: 296 YAKCGNIDSSMNVFRLMR-------------KRNVVTWNAL 323
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 133/317 (41%), Gaps = 42/317 (13%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER 130
N L+ + K +++ +++F+E+ ++ +VSW +++ G +E GR++F EMPER
Sbjct: 150 NALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG---LERGREVFHEMPER 206
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVI----------TGFLLNGDVD 180
+ V+W +++GY G + L+L M R N V +G L+ G
Sbjct: 207 NAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWV 266
Query: 181 SAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL-------VQA 233
K M + AS ++ G +DM A +CG+ D + V
Sbjct: 267 HVYALKKEMMMGEEASYDDVMVG---TALVDMYA----KCGNIDSSMNVFRLMRKRNVVT 319
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
+N L +G GK R + D P + K D +++ +++ G +
Sbjct: 320 WNALFSGLAMHGK---GRMVIDMFPQMIREVKPDD-------LTFTAVLSACSHSGIVDE 369
Query: 294 ARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMP-SPDALSWNSIISGFA 348
F S+ E + M+ + +EEA L +EMP P+ + S++ +
Sbjct: 370 GWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 349 QIGDLKVAKDFFERMPQ 365
G +++A+ + Q
Sbjct: 430 VHGKVEIAERIKRELIQ 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 133/327 (40%), Gaps = 54/327 (16%)
Query: 71 NTLISGHVKRREIAKARQLFDEMP--QRDIVSWNLIISGY-------------------- 108
N L + E+ A++LFDE+P ++D V W ++S +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 109 -----------FSCCGS----KFVEEGRKLFDEMPERDCVS-WNTVISGYAKNGRMDQAL 152
F C F ++G + +M V N ++ Y K G + +
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG---- 208
++F+ + E++ VS V+ + ++ F MPE ++ + + +++G + G
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRL-FDRIPNDQGDGKED 267
L++ A ++ CG G ++++ QSG + R + + + G+E
Sbjct: 227 VLELLAEMVFRCGHGLN-----FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEA 281
Query: 268 GRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
+V+ +++ Y K G+I S+ +F M +R+ WN + SG
Sbjct: 282 S---YDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVID 338
Query: 328 LFKEM---PSPDALSWNSIISGFAQIG 351
+F +M PD L++ +++S + G
Sbjct: 339 MFPQMIREVKPDDLTFTAVLSACSHSG 365
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 263/547 (48%), Gaps = 54/547 (9%)
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
D N++I+ Y K +A KLFD MPERN VS A++ G+ +G + FK M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM- 126
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLEC---GDGDEGK-------------HDLVQAY 234
SG R E +A + C G +EGK H+ V+
Sbjct: 127 ---------FFSGESRPNEF-VATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVR-- 174
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
NTL+ Y EA R+ D +P ++ ++S + Y++ G
Sbjct: 175 NTLVYMYSLCSGNGEAIRVLDDLP-------------YCDLSVFSSALSGYLECGAFKEG 221
Query: 295 RELFDSMGERDTCAWNTM-----ISGYVQISDMEEASKLFKEMP----SPDALSWNSIIS 345
++ D WN + + + + D+ A ++ M + + + ++I+
Sbjct: 222 LDVLRKTANEDF-VWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALIN 280
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+ + G + A+ F+ +N+ +++ Y +++ ++ A+ LFS+M + P+ +T
Sbjct: 281 MYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYT 340
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMK 464
+ +L+ L L G +H LV K+ + + + N+L+ MY++ G+I +A F+ M
Sbjct: 341 FAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT 400
Query: 465 FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
F +D++TWN MI G + HGL +ALE F +M P ITFI VL AC+H G VE+G
Sbjct: 401 F-RDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGL 459
Query: 525 RQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRV 584
FN ++ + ++P ++H+ V +L + G ++A D + + P++ D W LL +C V
Sbjct: 460 HYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYV 519
Query: 585 HGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
N L + A+ I P SG YVLL N++A W+ +VR LM + VKK+ G S
Sbjct: 520 RRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVS 579
Query: 645 WVDSSNR 651
W+ N+
Sbjct: 580 WIGIRNQ 586
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 204/493 (41%), Gaps = 89/493 (18%)
Query: 44 SHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNL 103
+HLI T + S A + N+LI+ +VK RE +AR+LFD MP+R++VSW
Sbjct: 55 AHLIVTNQSSRAE---------DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCA 105
Query: 104 IISGYFSCCGSKFVEEGRKLFDEM-------PERDCVSWNTVISGYAKNGRMDQALKLFD 156
++ GY + S F E KLF M P + V + +GR+++ +
Sbjct: 106 MMKGYQN---SGFDFEVLKLFKSMFFSGESRPNEFVAT--VVFKSCSNSGRIEEGKQFHG 160
Query: 157 AMPERNAVSS----NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
+ +S N ++ + L A+ +P CD + S+ +SG
Sbjct: 161 CFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG--------- 211
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR-- 270
LECG EG L + N + + RLF + + + R
Sbjct: 212 ----YLECGAFKEGLDVLRKTANEDFVWNNLT--YLSSLRLFSNLRDLNLALQVHSRMVR 265
Query: 271 --FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKL 328
F V + +++ Y K G ++ A+ +FD ++ T++ Y Q EEA L
Sbjct: 266 FGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNL 325
Query: 329 F-----KEMPSPDALSW-----------------------------------NSIISGFA 348
F KE+P P+ ++ N++++ +A
Sbjct: 326 FSKMDTKEVP-PNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 349 QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ G ++ A+ F M +++++WN++I+G + + A+E F +M GE P+R T
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 409 VLSVCT--GLVDLYLGKQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
VL C+ G V+ L +QL+ K V PD+ ++ + S+ G +A
Sbjct: 445 VLQACSHIGFVEQGL-HYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPI 503
Query: 466 YKDVITWNAMIGG 478
DV+ W ++
Sbjct: 504 EWDVVAWRTLLNA 516
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 228/456 (50%), Gaps = 57/456 (12%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N+L+ Y GK+E ++FD +P +R+VVSWN ++ YV G A
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMP-------------QRDVVSWNGLISSYVGNGRFEDA 131
Query: 295 RELFDSMGERDTCAW---------------------------------------NTMISG 315
+F M + + N ++
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDM 191
Query: 316 YVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLI 375
+ + +++A +F M + W S++ G+ G + A+ FER P K+++ W +++
Sbjct: 192 FCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMM 251
Query: 376 AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VI 434
GY + + A+ELF MQ G +PD L S+L+ C L GK +H + + V
Sbjct: 252 NGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVT 311
Query: 435 PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
D + +L+ MY++CG I A VF E+K +D +W ++I G A +G++ AL+L+ +
Sbjct: 312 VDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNGMSGRALDLYYE 370
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
M+ + + ITF++VL AC H G V EGR+ F+SM + ++P+ EH + +D+L R G
Sbjct: 371 MENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAG 430
Query: 555 QLQEAMDLINSMPVKPDKA---VWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVL 611
L EA +LI+ M + D+ V+ +LL + R +GNV++A+ A+ L +E S + L
Sbjct: 431 LLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTL 490
Query: 612 LYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
L ++YA+ W+D VR M++ ++K G S ++
Sbjct: 491 LASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIE 526
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 193/446 (43%), Gaps = 67/446 (15%)
Query: 70 WNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMP 128
+N ++ + K LF E+ + + N + G + V EG K+
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 129 ----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
E D N+++ YA G+++ K+FD MP+R+ VS N +I+ ++ NG + A+G
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 185 FFKRMPE-----CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
FKRM + D ++ + +S L++ I E V+ N L+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS---VRIGNALVD 190
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
+ + G +++AR +FD + + +NV W SM+ YV G I AR LF+
Sbjct: 191 MFCKCGCLDKARAVFDSMRD-------------KNVKCWTSMVFGYVSTGRIDEARVLFE 237
Query: 300 SMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKV 355
+D W M++GYVQ + +EA +LF+ M + PD S+++G AQ G L+
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 356 AK-----------------------------------DFFERMPQKNLISWNSLIAGYDK 380
K + F + +++ SW SLI G
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK--TVIPDLP 438
N A++L+ +M+ G + D T +VL+ C + G+++ +T+ V P
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 439 INNSLITMYSRCGAIGEACTVFNEMK 464
+ LI + R G + EA + ++M+
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMR 443
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 190/432 (43%), Gaps = 31/432 (7%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWN--LIISG 107
G++ FD M R+ V+WN LIS +V A +F M Q + ++ I+S
Sbjct: 95 GKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVST 154
Query: 108 YFSCCGSKFVEEGRKLFD------EMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
+C K +E G +++ EM R N ++ + K G +D+A +FD+M ++
Sbjct: 155 LSACSALKNLEIGERIYRFVVTEFEMSVR---IGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG 221
N +++ G++ G +D A F+R P D +A+++G V+ D A L C
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALE-LFRCM 270
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
+ D +L+ G Q+G +E+ + + I + R + V ++
Sbjct: 271 QTAGIRPDNF-VLVSLLTGCAQTGALEQGKWIHGYINEN---------RVTVDKVVGTAL 320
Query: 282 MMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP----DA 337
+ Y K G I +A E+F + ERDT +W ++I G A L+ EM + DA
Sbjct: 321 VDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNS-----LIAGYDKNEDYKGAIELFS 392
+++ ++++ G + + F M +++ + S LI + A EL
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGA 452
+M+ E ++ S+LS ++ + +++ + + K + D + L ++Y+
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Query: 453 IGEACTVFNEMK 464
+ V +MK
Sbjct: 501 WEDVTNVRRKMK 512
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 143/329 (43%), Gaps = 38/329 (11%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N + + G L +AR FDSM+ +N W +++ G+V I +AR LF+ P +D+V
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLF 155
W +++GY ++F +E +LF M D ++++G A+ G ++Q K
Sbjct: 246 LWTAMMNGYVQF--NRF-DEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWI 301
Query: 156 DAMPERNAVSSNAVITGFLLN-----GDVDSAVGFFKRMPECDSASLSALISGLVRNGEL 210
N V+ + V+ L++ G +++A+ F + E D+AS ++LI GL NG
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
A + E + G + ++ G V E R++F +
Sbjct: 362 GRALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE----------- 408
Query: 271 FRRNVVSWNSMMMCYV----KVGDIVSARELFDSM-GERDT------CAWNTMISGYVQI 319
R NV + C + + G + A EL D M GE D C+ + Y +
Sbjct: 409 -RHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNV 467
Query: 320 SDMEEASKLFKEMPSPDALSWNSIISGFA 348
E ++ +++ D+ + + S +A
Sbjct: 468 KIAERVAEKLEKVEVSDSSAHTLLASVYA 496
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 53/267 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W + + TGR+ EAR F+ ++ V W +++G+V+ +A +LF M I
Sbjct: 216 WTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGI 275
Query: 99 VSWNLI-------------------ISGY-------------------FSCCGSKFVEEG 120
N + I GY ++ CG +E
Sbjct: 276 RPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC--IETA 333
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLN 176
++F E+ ERD SW ++I G A NG +AL L+ M +A++ AV+T
Sbjct: 334 LEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHG 393
Query: 177 GDVDSAVGFFKRMPE-----CDSASLSALISGLVRNGELDMAAGILLEC-GDGDEGKHDL 230
G V F M E S S LI L R G LD A ++ + G+ DE L
Sbjct: 394 GFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDE---TL 450
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRI 257
V Y +L++ G V+ A R+ +++
Sbjct: 451 VPVYCSLLSAARNYGNVKIAERVAEKL 477
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 252/495 (50%), Gaps = 16/495 (3%)
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECG 221
N SN+++ + + ++ A F MP+ D S ++L+SG V++G + LE
Sbjct: 89 NTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH 148
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
D ++ ++ +A + + ++ G E G NVV N +
Sbjct: 149 RSDVFPNEF--SFTAALAACARLHLSPLGACIHSKLVKL---GLEKG-----NVVVGNCL 198
Query: 282 MMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWN 341
+ Y K G + A +F M E+DT +WN +++ + +E F +MP+PD +++N
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYN 258
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
+I F + GD A MP N SWN+++ GY +E A E F++M G +
Sbjct: 259 ELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF 318
Query: 402 DRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVF 460
D ++LS VL+ L + G +H K + + + ++LI MYS+CG + A +F
Sbjct: 319 DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF 378
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHPTYITFISVLNACAHAGL 519
M K++I WN MI GYA +G +++A++LF Q+K+ + + P TF+++L C+H +
Sbjct: 379 WTMP-RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEV 437
Query: 520 -VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGAL 578
+E F MIN+Y I+P VEH S + +G++G++ +A +I D W AL
Sbjct: 438 PMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL 497
Query: 579 LGSCRVHGNVELAQVAAQALISL--EPESSGPYVLLYNMYANLELWDDAERVRVLMEEKN 636
LG+C +++ A+ A +I L + Y+++ N+YA E W + ++R +M E
Sbjct: 498 LGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESG 557
Query: 637 VKKQTGYSWVDSSNR 651
V K+ G SW+DS +
Sbjct: 558 VLKEVGSSWIDSRTK 572
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 189/470 (40%), Gaps = 115/470 (24%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD 125
NT N+L+ + + A ++FDEMP D++SWN ++SGY S +EG LF
Sbjct: 89 NTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQ---SGRFQEGICLFL 145
Query: 126 EMPERD----------------------------------------CVSWNTVISGYAKN 145
E+ D V N +I Y K
Sbjct: 146 ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC 205
Query: 146 GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLV 205
G MD A+ +F M E++ VS NA++ NG ++ + FF +MP D+ + + LI V
Sbjct: 206 GFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFV 265
Query: 206 RNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
++G+ + A +L + + + ++NT++ GY S K EA F ++
Sbjct: 266 KSGDFNNAFQVLSDMPNPNS------SSWNTILTGYVNSEKSGEATEFFTKM-------H 312
Query: 266 EDGRRFRRNVVS-------------WNSMM-MCYVKVGDIVSARELFDSMGERDTCAWNT 311
G RF +S W S++ C K+G + R A +
Sbjct: 313 SSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG-----------LDSRVVVA-SA 360
Query: 312 MISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISW 371
+I Y + ++ A +F MP + + WN +ISG+A+ GD A F ++ Q+ +
Sbjct: 361 LIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL-- 418
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL---VDLYLGKQMHQL 428
KPDR T ++L+VC+ +++ LG +
Sbjct: 419 ----------------------------KPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMI 450
Query: 429 VTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
+ P + SLI + G + +A V E F D + W A++G
Sbjct: 451 NEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGA 500
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 161/384 (41%), Gaps = 36/384 (9%)
Query: 45 HLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLI 104
HL G ++ ++ N V N LI + K + A +F M ++D VSWN I
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 105 ISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV 164
++ SC + +E G F +MP D V++N +I + K+G + A ++ MP N+
Sbjct: 230 VA---SCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSS 286
Query: 165 SSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLEC 220
S N ++TG++ + A FF +M D SLS I + G L+
Sbjct: 287 SWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLS--IVLAAVAALAVVPWGSLIHA 344
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
G V + LI Y + G ++ A +F +P R+N++ WN
Sbjct: 345 CAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-------------RKNLIVWNE 391
Query: 281 MMMCYVKVGDIVSARELFDSMGE-------RDTCAWNTMISGYVQISDMEEASKLFKEMP 333
M+ Y + GD + A +LF+ + + R T + + ++ ME F+ M
Sbjct: 392 MISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVP-MEVMLGYFEMMI 450
Query: 334 S-----PDALSWNSIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAGYDKNEDYKGA 387
+ P S+I Q G++ AK + + ++W +L+ +D K A
Sbjct: 451 NEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAA 510
Query: 388 IELFSQMQLEGEKPDRHTLSSVLS 411
+ ++M G+ L V+S
Sbjct: 511 KTVAAKMIELGDADKDEYLYIVMS 534
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 115/237 (48%), Gaps = 32/237 (13%)
Query: 370 SWNSLI---AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
SW++++ A + + A+EL + +GEKPD L +L V + L +Q+H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIN----DGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 427 QLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA 485
VTK + + ++NSL+ Y ++ +A VF+EM DVI+WN+++ GY G
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP-DPDVISWNSLVSGYVQSGRF 137
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACA-----------HAGLVEEGRRQFNSMINDY 534
+ + LF ++ R + P +F + L ACA H+ LV+ G + N ++ +
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN- 196
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
+D+ G+ G + +A+ + M K D W A++ SC +G +EL
Sbjct: 197 ----------CLIDMYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG 242
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 64/266 (24%)
Query: 18 CSR------GLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWN 71
CSR GL FH+ + ++ +N+ I +++G + A M + N+ +WN
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTV---TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN 289
Query: 72 TLISGHVKRREIAKARQLFDEMPQRDI-------------------VSWNLIISG----- 107
T+++G+V + +A + F +M + V W +I
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 108 --------------YFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
+S CG ++ +F MP ++ + WN +ISGYA+NG +A+K
Sbjct: 350 GLDSRVVVASALIDMYSKCG--MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIK 407
Query: 154 LFDAM-------PERN------AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSAL 200
LF+ + P+R AV S+ + ++ G + + ++ P + +L
Sbjct: 408 LFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHC--CSL 465
Query: 201 ISGLVRNGELDMAAGILLECGDGDEG 226
I + + GE+ A ++ E G G +G
Sbjct: 466 IRAMGQRGEVWQAKQVIQEFGFGYDG 491
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 189/316 (59%), Gaps = 6/316 (1%)
Query: 334 SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
S D+L +++ +++ GDL A F+ MP +++ SWN+LIAG A+EL+ +
Sbjct: 141 SADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKR 200
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM-HQLVTKTVIPDLPINNSLITMYSRCGA 452
M+ EG + T+ + L C+ L D+ G+ + H VI ++N+ I MYS+CG
Sbjct: 201 METEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI----VSNAAIDMYSKCGF 256
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
+ +A VF + K V+TWN MI G+A HG A ALE+F +++ I P +++++ L
Sbjct: 257 VDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDK 572
AC HAGLVE G FN+M G+E ++H+ VD+L R G+L+EA D+I SM + PD
Sbjct: 317 ACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP 375
Query: 573 AVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLM 632
+W +LLG+ ++ +VE+A++A++ + + + G +VLL N+YA W D RVR M
Sbjct: 376 VLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDM 435
Query: 633 EEKNVKKQTGYSWVDS 648
E K VKK G S++++
Sbjct: 436 ESKQVKKIPGLSYIEA 451
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSP--- 335
+++ Y K GD++SA +LFD M RD +WN +I+G V + EA +L+K M +
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 336 --------------------------------DALSWNSIISGFAQIGDLKVAKDFFERM 363
+ + N+ I +++ G + A FE+
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQF 267
Query: 364 P-QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLY 420
+K++++WN++I G+ + + A+E+F +++ G KPD + + L+ C GLV+
Sbjct: 268 TGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
Query: 421 LGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
L + + K V ++ ++ + SR G + EA + M D + W +++G
Sbjct: 328 LS-VFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 130/320 (40%), Gaps = 63/320 (19%)
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
D + T++ Y+KNG + A KLFD MP R+ S NA+I G + A+ +KRM
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
+ +R E+ + A + G V+E
Sbjct: 203 -----------TEGIRRSEVTVVAA----------------------LGACSHLGDVKEG 229
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM-GERDTCAW 309
+F ND NV+ N+ + Y K G + A ++F+ G++ W
Sbjct: 230 ENIFHGYSND-------------NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTW 276
Query: 310 NTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP- 364
NTMI+G+ + A ++F ++ PD +S+ + ++ G ++ F M
Sbjct: 277 NTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMAC 336
Query: 365 ---QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYL 421
++N+ + ++ + + A ++ M + PD S+L G ++Y
Sbjct: 337 KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSM---IPDPVLWQSLL----GASEIYS 389
Query: 422 GKQMHQLVTKTVIPDLPINN 441
+M ++ ++ I ++ +NN
Sbjct: 390 DVEMAEIASRE-IKEMGVNN 408
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 14 PRTLCSRGLASFH----KTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVT 69
R LCS + H + + SLL + + G L A FD M R+ +
Sbjct: 120 ARALCSSAMDQLHCQINRRGLSADSLL--CTTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 70 WNTLISGHVKRREIAKARQLFDEMPQRDI-VSWNLIISGYFSCCGSKFVEEGRKLFDEMP 128
WN LI+G V ++A +L+ M I S +++ +C V+EG +F
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAMP-ERNAVSSNAVITGFLLNGDVDSAVGFFK 187
+ + N I Y+K G +D+A ++F+ +++ V+ N +ITGF ++G+ A+ F
Sbjct: 238 NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFD 297
Query: 188 RMPEC-----DSASLSALI----SGLVRNG 208
++ + D + L+AL +GLV G
Sbjct: 298 KLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/701 (26%), Positives = 316/701 (45%), Gaps = 122/701 (17%)
Query: 12 QLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEA-RTF----FDSMKHRN 66
QLPR + KT+D+ES +N H I G+L EA RTF + S H
Sbjct: 28 QLPRPISETS-----KTHDDESVPQVLFNS-FRHCISHGQLYEAFRTFSLLRYQSGSHEF 81
Query: 67 TV-TWNTLISGHVKRREIAKARQL----------FDEMPQRDIVSWNLIISGYFSCCGSK 115
+ + +L+S V E +QL FD + +V++ S + ++
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF---YSAFNLLDEAQ 138
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
+ E ++ +P WN +I Y +N R +++ ++ M +
Sbjct: 139 TITENSEILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMSK-------------- 178
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
G + + C A+L G V +G +++++ C + N
Sbjct: 179 -GIRADEFTYPSVIKAC--AALLDFAYGRVVHGSIEVSSH---RCN---------LYVCN 223
Query: 236 TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
LI+ Y + GKV+ ARRLFDR+ R+ VSWN+++ CY + A
Sbjct: 224 ALISMYKRFGKVDVARRLFDRMS-------------ERDAVSWNAIINCYTSEEKLGEAF 270
Query: 296 ELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL-------------------FKEM 332
+L D M E WNT+ G ++ + A K
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 333 PSPDALSW----------------------NSIISGFAQIGDLKVAKDFFERMPQKNLIS 370
AL W NS+I+ +++ DL+ A F+++ +L +
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
WNS+I+G+ NE + L +M L G P+ TL+S+L + + +L GK+ H +
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 431 K--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+ + L + NSL+ MY++ G I A VF+ M+ +D +T+ ++I GY G A
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVA 509
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
L FK M R I P ++T ++VL+AC+H+ LV EG F M + +GI R+EH++ VD
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAA-QALISLEPESSG 607
+ R G L +A D+ +++P +P A+ LL +C +HGN + + AA + L+ +PE G
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 608 PYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
Y+LL +MYA W V+ L+ + V+K ++ +++
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 187/701 (26%), Positives = 316/701 (45%), Gaps = 122/701 (17%)
Query: 12 QLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEA-RTF----FDSMKHRN 66
QLPR + KT+D+ES +N H I G+L EA RTF + S H
Sbjct: 28 QLPRPISETS-----KTHDDESVPQVLFNS-FRHCISHGQLYEAFRTFSLLRYQSGSHEF 81
Query: 67 TV-TWNTLISGHVKRREIAKARQL----------FDEMPQRDIVSWNLIISGYFSCCGSK 115
+ + +L+S V E +QL FD + +V++ S + ++
Sbjct: 82 VLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTF---YSAFNLLDEAQ 138
Query: 116 FVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
+ E ++ +P WN +I Y +N R +++ ++ M +
Sbjct: 139 TITENSEILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMSK-------------- 178
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
G + + C A+L G V +G +++++ C + N
Sbjct: 179 -GIRADEFTYPSVIKAC--AALLDFAYGRVVHGSIEVSSH---RCN---------LYVCN 223
Query: 236 TLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
LI+ Y + GKV+ ARRLFDR+ R+ VSWN+++ CY + A
Sbjct: 224 ALISMYKRFGKVDVARRLFDRMS-------------ERDAVSWNAIINCYTSEEKLGEAF 270
Query: 296 ELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL-------------------FKEM 332
+L D M E WNT+ G ++ + A K
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 333 PSPDALSW----------------------NSIISGFAQIGDLKVAKDFFERMPQKNLIS 370
AL W NS+I+ +++ DL+ A F+++ +L +
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
WNS+I+G+ NE + L +M L G P+ TL+S+L + + +L GK+ H +
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 431 K--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+ + L + NSL+ MY++ G I A VF+ M+ +D +T+ ++I GY G A
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVA 509
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
L FK M R I P ++T ++VL+AC+H+ LV EG F M + +GI R+EH++ VD
Sbjct: 510 LAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVD 569
Query: 549 ILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAA-QALISLEPESSG 607
+ R G L +A D+ +++P +P A+ LL +C +HGN + + AA + L+ +PE G
Sbjct: 570 LYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLG 629
Query: 608 PYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
Y+LL +MYA W V+ L+ + V+K ++ +++
Sbjct: 630 HYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMET 670
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/618 (25%), Positives = 296/618 (47%), Gaps = 34/618 (5%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G+ EA F S+++ +T++W +IS V R+ +A Q + EM + +
Sbjct: 171 KCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK 230
Query: 108 YFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
+E G+ + + R + V +++ Y++ +M+ A+++ ++ E++
Sbjct: 231 LLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDV 290
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLE 219
+V++GF+ N AVG F M + ++ + SA++S LD G +
Sbjct: 291 FLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF--GKQIH 348
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVE-EARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
G D N L+ Y + E EA R+F G NVVSW
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF-------------GAMVSPNVVSW 395
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD--------MEEASKLFK 330
++++ V G + L M +R+ +SG ++ +E + L +
Sbjct: 396 TTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR 455
Query: 331 EMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
+ + NS++ +A + A + M +++ I++ SL+ +++ ++ A+ +
Sbjct: 456 RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSV 515
Query: 391 FSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP-INNSLITMYSR 449
+ M +G + D+ +L +S L L GK +H K+ + NSL+ MYS+
Sbjct: 516 INYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSK 575
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
CG++ +A VF E+ DV++WN ++ G AS+G AL F++M+ + P +TF+
Sbjct: 576 CGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
+L+AC++ L + G F M Y IEP+VEH+ V ILGR G+L+EA ++ +M +K
Sbjct: 635 LLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLK 694
Query: 570 PDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVR 629
P+ ++ LL +CR GN+ L + A ++L P Y+LL ++Y + A++ R
Sbjct: 695 PNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTR 754
Query: 630 VLMEEKNVKKQTGYSWVD 647
LM EK + K+ G S V+
Sbjct: 755 NLMTEKRLSKKLGKSTVE 772
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 118/226 (52%), Gaps = 4/226 (1%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
N+++S + + + A+ F+ M + + +W +I+ + K++++ A+ LF +M G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTV 459
P+ T SSV+ C GL D+ G ++H V KT + + +SL +YS+CG EAC +
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F+ ++ D I+W MI +AL+ + +M + + P TF+ +L A + GL
Sbjct: 182 FSSLQ-NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINS 565
E + +S I GI V S VD + ++++A+ ++NS
Sbjct: 241 --EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 157/352 (44%), Gaps = 45/352 (12%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS---- 334
N+++ Y+K I +AR+LFD M R AW MIS + + + A LF+EM +
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 335 PDALSWNSII---------------------SGF--------------AQIGDLKVAKDF 359
P+ +++S++ +GF ++ G K A +
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
F + + ISW +I+ ++ A++ +S+M G P+ T +L + + L
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG-ASSFLGL 240
Query: 420 YLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
GK +H + IP ++ + SL+ YS+ + +A V N +DV W +++ G
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTSVVSG 299
Query: 479 YASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEP 538
+ + A +A+ F +M+ L + P T+ ++L+ C+ ++ G +Q +S G E
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG-KQIHSQTIKVGFED 358
Query: 539 RVEHFASFVDILGRQGQLQ-EAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
+ + VD+ + + EA + +M V P+ W L+ HG V+
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQ 409
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 421 LGKQMHQLVTK-TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGY 479
+G +H V K ++ +L + N+L+++Y + I A +F+EM ++ V W MI +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMS-HRTVFAWTVMISAF 99
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR 539
AL LF++M HP TF SV+ +CA + G R S+I G E
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT-GFEGN 158
Query: 540 VEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
+S D+ + GQ +EA +L +S+ D W ++ S
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISS 199
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 190/694 (27%), Positives = 318/694 (45%), Gaps = 91/694 (13%)
Query: 23 ASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRRE 82
ASF K + ++ L N IS ++ G EA F S+ V++ LISG +
Sbjct: 104 ASFLKLREEKTRL---GNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNL 160
Query: 83 IAKARQLFDEMPQRDIVSWN--LIISGYFSCCGSKFVEEGRKLFDEMPERDCVSW----N 136
+A ++F M + +V N ++ +C G ++ + + ++ N
Sbjct: 161 EIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSN 220
Query: 137 TVISGYAKNG--RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC-- 192
+++S Y K+ D LKLFD +P+R+ S N V++ + G A F M
Sbjct: 221 SLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEG 280
Query: 193 ---DSASLSALISG------LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQ 243
DS +LS L+S L+R EL G + G E + N LI Y +
Sbjct: 281 FGVDSFTLSTLLSSCTDSSVLLRGRELH---GRAIRIGLMQE-----LSVNNALIGFYSK 332
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
+++ L++ + ++ V++ M+ Y+ G + SA E+F ++ E
Sbjct: 333 FWDMKKVESLYEMM-------------MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 304 RDTCAWNTMISGYVQISDMEEASKLFKEMPSPDA----LSWNSIISGFAQIGDLKV---- 355
++T +N +++G+ + +A KLF +M S S + + + KV
Sbjct: 380 KNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQI 439
Query: 356 -------------------------------AKDFFERMPQKNLIS---WNSLIAGYDKN 381
A++ F++ P NL S S+I GY +N
Sbjct: 440 HGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPS-NLDSSKATTSIIGGYARN 498
Query: 382 EDYKGAIELFSQMQLEGEK-PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPI 439
A+ LF + E + D +L+ +L+VC L +G Q+H K D+ +
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISL 558
Query: 440 NNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK 499
NSLI+MY++C +A +FN M+ + DVI+WN++I Y +AL L+ +M +
Sbjct: 559 GNSLISMYAKCCDSDDAIKIFNTMREH-DVISWNSLISCYILQRNGDEALALWSRMNEKE 617
Query: 500 IHPTYITFISVLNACAH--AGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
I P IT V++A + + + R F SM Y IEP EH+ +FV +LG G L+
Sbjct: 618 IKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLE 677
Query: 558 EAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYA 617
EA D INSMPV+P+ +V ALL SCR+H N +A+ A+ ++S +PE+ Y+L N+Y+
Sbjct: 678 EAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYS 737
Query: 618 NLELWDDAERVRVLMEEKNVKKQTGYSWVDSSNR 651
W +E +R M E+ +K SW+ N+
Sbjct: 738 ASGFWHRSEMIREEMRERGYRKHPAKSWIIHENK 771
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/411 (29%), Positives = 218/411 (53%), Gaps = 17/411 (4%)
Query: 244 SGKVEEARRLFDRIPND--QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
+G + A+ LFD +D D R F + NS++ R L S+
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILF---------YNRMLLSSV 102
Query: 302 GERDTCAWNTMISGYVQISDMEEASKLFKEMPSP----DALSWNSIISGFAQIGDLKVAK 357
D +N + +I + + ++ + DA+ S++ ++ G +++A
Sbjct: 103 SRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIAS 162
Query: 358 DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
F+ MP ++L+SWN +I + + A+ ++ +M EG D +TL ++LS C +
Sbjct: 163 KVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVS 222
Query: 418 DLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
L +G +H++ + ++N+LI MY++CG++ A VFN M+ +DV+TWN+MI
Sbjct: 223 ALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMI 281
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGI 536
GY HG V+A+ F++M + P ITF+ +L C+H GLV+EG F M + + +
Sbjct: 282 IGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHL 341
Query: 537 EPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQ 596
P V+H+ VD+ GR GQL+ ++++I + D +W LLGSC++H N+EL +VA +
Sbjct: 342 TPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMK 401
Query: 597 ALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
L+ LE ++G YVL+ ++Y+ +R L+ +++ G+SW++
Sbjct: 402 KLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIE 452
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 163/412 (39%), Gaps = 101/412 (24%)
Query: 44 SHLIR------TGRLSEARTFFDSM-KHRNTVTWNTLISGHVKRREIAKA-----RQLFD 91
+HL+R TG LS A+ FD +T WN LI G + R L
Sbjct: 41 NHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLS 100
Query: 92 EMPQRDIVSWN---------------------LIISGY-------------FSCCGSKFV 117
+ + D+ ++N +I SG+ +S GS V
Sbjct: 101 SVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGS--V 158
Query: 118 EEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG 177
E K+FDEMP RD VSWN +I ++ G +QAL ++ M N + G
Sbjct: 159 EIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM-------GNEGVCG----- 206
Query: 178 DVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTL 237
DS +L AL+S L+M G++L D V N L
Sbjct: 207 ---------------DSYTLVALLSSCAHVSALNM--GVMLHRIACDIRCESCVFVSNAL 249
Query: 238 IAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL 297
I Y + G +E A +F +G R +R+V++WNSM++ Y G V A
Sbjct: 250 IDMYAKCGSLENAIGVF------------NGMR-KRDVLTWNSMIIGYGVHGHGVEAISF 296
Query: 298 FDSM---GER-DTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIISGFA 348
F M G R + + ++ G ++E + F+ M S P+ + ++ +
Sbjct: 297 FRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 349 QIGDLKVAKD-FFERMPQKNLISWNSLIAGYDKNEDYK-GAIELFSQMQLEG 398
+ G L+ + + + ++ + W +L+ + + + G + + +QLE
Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEA 408
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 244/506 (48%), Gaps = 53/506 (10%)
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+F+ + + +NT+I GY+ + ++A +F+ + + G L+
Sbjct: 81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAK----------GLTLD-----R 125
Query: 183 VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYG 242
F + C ++ GL GI L G N LI Y
Sbjct: 126 FSFITTLKSCSRELCVSIGEGL---------HGIALR-----SGFMVFTDLRNALIHFYC 171
Query: 243 QSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG 302
GK+ +AR++FD +P + V+++++M Y++V A +LF M
Sbjct: 172 VCGKISDARKVFDEMPQSV------------DAVTFSTLMNGYLQVSKKALALDLFRIMR 219
Query: 303 ERDTCA-WNTMISGYVQISDM------EEASKL-FKEMPSPDALSWNSIISGFAQIGDLK 354
+ + +T++S ISD+ E A L K D ++I + + G +
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGIS 279
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
A+ F+ +K++++WN +I Y K + + L QM+ E KP+ T +LS C
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 415 GLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
++G+ + L+ + I D + +L+ MY++ G + +A +FN MK KDV +W
Sbjct: 340 YSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSWT 398
Query: 474 AMIGGYASHGLAVDALELFKQMKR--LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI 531
AMI GY +HGLA +A+ LF +M+ K+ P ITF+ VLNAC+H GLV EG R F M+
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 532 NDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
Y P+VEH+ VD+LGR GQL+EA +LI ++P+ D W ALL +CRV+GN +L
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 592 QVAAQALISLEPESSGPYVLLYNMYA 617
+ L + +LL +A
Sbjct: 519 ESVMMRLAEMGETHPADAILLAGTHA 544
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 208/487 (42%), Gaps = 109/487 (22%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV-------------SW 101
A + F+ + + N +NT+I G+ E +A +F+++ + + S
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 102 NLIIS-------------------------GYFSCCGSKFVEEGRKLFDEMPER-DCVSW 135
L +S ++ CG + + RK+FDEMP+ D V++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGK--ISDARKVFDEMPQSVDAVTF 195
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA 195
+T+++GY + + AL LF M + V + + + FL SA+ + +SA
Sbjct: 196 STLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL------SAISDLGDLSGAESA 249
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ + GL +LD+ L+ A LI YG++G + ARR+FD
Sbjct: 250 HVLCIKIGL----DLDL----------------HLITA---LIGMYGKTGGISSARRIFD 286
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM-------------G 302
R++VV+WN M+ Y K G + L M G
Sbjct: 287 -------------CAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG 333
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFER 362
+CA++ ++D+ E +E + DA+ +++ +A++G L+ A + F R
Sbjct: 334 LLSSCAYSEAAFVGRTVADLLE-----EERIALDAILGTALVDMYAKVGLLEKAVEIFNR 388
Query: 363 MPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK--PDRHTLSSVLSVCT--GLV- 417
M K++ SW ++I+GY + + A+ LF++M+ E K P+ T VL+ C+ GLV
Sbjct: 389 MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVM 448
Query: 418 -DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
+ K+M + + T P + ++ + R G + EA + + D W A++
Sbjct: 449 EGIRCFKRMVEAYSFT--PKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALL 506
Query: 477 GGYASHG 483
+G
Sbjct: 507 AACRVYG 513
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 151/342 (44%), Gaps = 55/342 (16%)
Query: 346 GFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
F+ + D++ A FE + NL +N++I GY +++ + A +F+Q++ +G DR +
Sbjct: 68 AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFS 127
Query: 406 LSSVLSVCTGLVDLYLGKQMHQLVTKT---VIPDLPINNSLITMYSRCGAIGEACTVFNE 462
+ L C+ + + +G+ +H + ++ V DL N+LI Y CG I +A VF+E
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL--RNALIHFYCVCGKISDARKVFDE 185
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNA--------- 513
M D +T++ ++ GY AL+LF+ M++ ++ T +S L+A
Sbjct: 186 MPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSG 245
Query: 514 -------CAHAGL-------------------VEEGRRQFNSMINDYGIEPRVEHFASFV 547
C GL + RR F D I V + +
Sbjct: 246 AESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF-----DCAIRKDVVTWNCMI 300
Query: 548 DILGRQGQLQEAMDLINSM---PVKPDKAVWGALLGSCRVHGNVELAQVAAQAL----IS 600
D + G L+E + L+ M +KP+ + + LL SC + + A L I+
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 601 LEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTG 642
L+ V +MYA + L + A + M++K+VK T
Sbjct: 361 LDAILGTALV---DMYAKVGLLEKAVEIFNRMKDKDVKSWTA 399
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 156/380 (41%), Gaps = 70/380 (18%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHR-NTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
N I G++S+AR FD M + VT++TL++G+++ + A A LF M + ++
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 99 V-------SWNLIISGYFSCCGSKF-----------------------------VEEGRK 122
V S+ IS G++ + R+
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+FD +D V+WN +I YAK G +++ + L M +++ G LL+ S
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG-LLSSCAYSE 342
Query: 183 VGFFKRMP---------ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQA 233
F R D+ +AL+ + G L+ A I D D V++
Sbjct: 343 AAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD------VKS 396
Query: 234 YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVS 293
+ +I+GYG G EA LF+++ +E+ + R N +++ ++ G ++
Sbjct: 397 WTAMISGYGAHGLAREAVTLFNKM-------EEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 294 ARELFDSMGERDTCAWNTMISGYVQISD-------MEEASKLFKEMP-SPDALSWNSIIS 345
F M E ++ + Y + D +EEA +L + +P + D+ +W ++++
Sbjct: 450 GIRCFKRMVE--AYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLA 507
Query: 346 GFAQIGDLKVAKDFFERMPQ 365
G+ + + R+ +
Sbjct: 508 ACRVYGNADLGESVMMRLAE 527
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
LH I +TG +S AR FD ++ VTWN +I + K + + L +M
Sbjct: 262 LHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKY 321
Query: 96 RDIVSWNLIISGYFSCCG---SKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRM 148
+ + G S C + FV GR + D + E D + ++ YAK G +
Sbjct: 322 EKMKPNSSTFVGLLSSCAYSEAAFV--GRTVADLLEEERIALDAILGTALVDMYAKVGLL 379
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG 208
++A+++F+ M +++ S A+I+G+ +G AV F +M E + I+ LV
Sbjct: 380 EKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYN---------TLIAGYGQSGKVEEARRLFDRIP 258
G+++E G +V+AY+ ++ G++G++EEA L +P
Sbjct: 440 ACS-HGGLVME---GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLP 494
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 227/427 (53%), Gaps = 48/427 (11%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFK 330
F + + N +++ YVK+ +I +AR+LFD M E + +W ++ISGY + + A +F+
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 331 EM----PSP-------------DALSWNSI---------ISG--------------FAQI 350
+M P P AL+ + I ISG + +
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 351 GDLKVAKDFFERMPQ--KNLISWNSLIAGYDKNEDYKGAIELFSQMQ--LEGEKPDRHTL 406
D++ A+ F+ M +N++SW S+I Y +N AIELF L ++ ++ L
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 407 SSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
+SV+S C+ L L GK H LVT+ + + SL+ MY++CG++ A +F ++
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
+ VI++ +MI A HGL A++LF +M +I+P Y+T + VL+AC+H+GLV EG
Sbjct: 300 H-SVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLE 358
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA--VWGALLGSCR 583
+ M YG+ P H+ VD+LGR G++ EA +L ++ V ++ +WGALL + R
Sbjct: 359 YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGR 418
Query: 584 VHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGY 643
+HG VE+ A++ LI + + Y+ L N YA W+D+E +R+ M+ K+
Sbjct: 419 LHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERAC 478
Query: 644 SWVDSSN 650
SW+++ +
Sbjct: 479 SWIENKD 485
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 159/418 (38%), Gaps = 101/418 (24%)
Query: 28 TNDNESSLLHQWNKK---------ISHLI----RTGRLSEARTFFDSMKHRNTVTWNTLI 74
TN ++LLH K ++HL+ + ++ AR FD M N V+W ++I
Sbjct: 43 TNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVI 102
Query: 75 SGHVKRREIAKARQLFDEMPQ--------------------------------------- 95
SG+ + A +F +M +
Sbjct: 103 SGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGL 162
Query: 96 -RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP--ERDCVSWNTVISGYAKNGRMDQAL 152
R+IV + ++ Y C VE R++FD M R+ VSW ++I+ YA+N R +A+
Sbjct: 163 RRNIVVSSSLVDMYGKC---NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP--------------ECDSASLS 198
+LF + NA ++ F+L V SA R+ E ++ +
Sbjct: 220 ELFRSF---NAALTSDRANQFML-ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVAT 275
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+L+ + G L A I L + V +Y ++I + G E A +LFD +
Sbjct: 276 SLLDMYAKCGSLSCAEKIFLRI------RCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER---------DTCAW 309
R N V+ ++ G + E M E+ TC
Sbjct: 330 ---------AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVV 380
Query: 310 NTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKN 367
+ M+ + ++ + E +K + AL W +++S G +++ + +R+ Q N
Sbjct: 381 D-MLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 283/590 (47%), Gaps = 59/590 (10%)
Query: 65 RNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLF 124
R T N + + K + A QLFD++P ++ ++WN+ + G F + ++ LF
Sbjct: 37 RTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK---NGYLNNALDLF 93
Query: 125 DEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVG 184
DEMPERD VSWNT+ISG G + +++F M
Sbjct: 94 DEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEI--------------------- 132
Query: 185 FFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQS 244
R E + L++L++ VR+GE I +++LV +N+++ Y +
Sbjct: 133 ---RPTEFTFSILASLVT-CVRHGEQIHGNAIC-----SGVSRYNLV-VWNSVMDMYRRL 182
Query: 245 GKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER 304
G + A +F + + R+VVSWN +++ G+ A + F M E
Sbjct: 183 GVFDYALSVFLTMED-------------RDVVSWNCLILSCSDSGNKEVALDQFWLMREM 229
Query: 305 DTCAWNTMISGYVQI-SDMEEASKLFKEMPSPDALSW--NSIISG-----FAQIGDLKVA 356
+ +S V I SD+ E SK + + + + NSI+ G F++ L +
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDS 289
Query: 357 KDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
F + + + + NS+I Y + + A+ LF + +PD+ T SSVLS +
Sbjct: 290 VKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV 349
Query: 417 VDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAM 475
+ L G +H LV K D + SL+ MY + G++ A VF + KD+I WN +
Sbjct: 350 M-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTD-GKDLIFWNTV 407
Query: 476 IGGYASHGLAVDALELFKQ-MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
I G A + AV++L +F Q + + P +T + +L AC +AG V EG + F+SM +
Sbjct: 408 IMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAH 467
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVA 594
G+ P EH+A +++L R G + EA D+ + +P +P +W +L + G+ LA+
Sbjct: 468 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 527
Query: 595 AQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
A+ ++ EP+SS PY++L +Y W+++ ++R M E +K G S
Sbjct: 528 AKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSS 577
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 174/406 (42%), Gaps = 76/406 (18%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFK 330
F R N + Y K G +++A +LFD + +++T WN + G + + A LF
Sbjct: 35 FVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFD 94
Query: 331 EMPSPDALSWNSIISGFAQIG----DLKVAKDF--FERMPQK------------------ 366
EMP D +SWN++ISG G ++V D +E P +
Sbjct: 95 EMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQ 154
Query: 367 -------------NLISWNSLIAGYDKNEDYKGAIELFSQMQ------------------ 395
NL+ WNS++ Y + + A+ +F M+
Sbjct: 155 IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSG 214
Query: 396 ----------LEGE---KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINN 441
L E +PD +T+S V+S+C+ L +L GKQ L K + + +
Sbjct: 215 NKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLG 274
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
+ I M+S+C + ++ +F E++ + V+ N+MIG Y+ H DAL LF +
Sbjct: 275 AGIDMFSKCNRLDDSVKLFRELEKWDSVLC-NSMIGSYSWHCCGEDALRLFILAMTQSVR 333
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P TF SVL++ +A +++ G +S++ G + S +++ + G + AM
Sbjct: 334 PDKFTFSSVLSS-MNAVMLDHG-ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMG 391
Query: 562 LINSMPVKPDKAVWG-ALLGSCRVHGNVELAQVAAQALI--SLEPE 604
+ K D W ++G R VE + Q L+ SL+P+
Sbjct: 392 VFAKTDGK-DLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPD 436
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 199/512 (38%), Gaps = 117/512 (22%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N+ + ++G + A FD + +NT+TWN + G K + A LFDEMP+RD+V
Sbjct: 43 NRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVV 102
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEM-------------------------------- 127
SWN +ISG SC F E G ++F +M
Sbjct: 103 SWNTMISGLVSC---GFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNA 159
Query: 128 -----PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+ V WN+V+ Y + G D AL +F M +R+ VS N +I +G+ + A
Sbjct: 160 ICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVA 219
Query: 183 VGFFKRMPEC----DSASLSALIS---------------------GLVRNGELDMAAGI- 216
+ F M E D ++S ++S G + N + + AGI
Sbjct: 220 LDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNS-IVLGAGID 278
Query: 217 -LLECGDGDEG--------KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKED 267
+C D+ K D V N++I Y E+A RLF I + D
Sbjct: 279 MFSKCNRLDDSVKLFRELEKWDSVLC-NSMIGSYSWHCCGEDALRLF--ILAMTQSVRPD 335
Query: 268 GRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
F + S N++M+ + + + FD DT +++ Y + ++ A
Sbjct: 336 KFTFSSVLSSMNAVMLDHGADVHSLVIKLGFD----LDTAVATSLMEMYFKTGSVDLAMG 391
Query: 328 LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGA 387
+F + D + WN++I G A +N +
Sbjct: 392 VFAKTDGKDLIFWNTVIMGLA-------------------------------RNSRAVES 420
Query: 388 IELFSQMQL-EGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLI 444
+ +F+Q+ + + KPDR TL +L C + G Q+ + K V P +I
Sbjct: 421 LAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACII 480
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
+ R G I EA + +++ F W ++
Sbjct: 481 ELLCRVGMINEAKDIADKIPFEPSSHIWEPIL 512
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 9/300 (3%)
Query: 288 VGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGF 347
+ IV A +L ++ R T N + Y + + A +LF ++P + ++WN + G
Sbjct: 22 LAKIVHA-QLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGL 80
Query: 348 AQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS 407
+ G L A D F+ MP+++++SWN++I+G ++ I +F MQ +P T S
Sbjct: 81 FKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 408 SVLSVCTGLVDLYLGKQMH--QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
+ S+ T + G+Q+H + + +L + NS++ MY R G A +VF M+
Sbjct: 141 ILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME- 196
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
+DV++WN +I + G AL+ F M+ ++I P T V++ C+ + +G++
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVH 585
I G + +D+ + +L +++ L + K D + +++GS H
Sbjct: 257 ALALCIK-MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIGSYSWH 314
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 218/418 (52%), Gaps = 41/418 (9%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
NT+I + S E RLF + + N +S + + C +K GD++
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSS--------LPANPLSSSFALKCCIKSGDLL-- 130
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
G +QI K+F + D+L +++ ++ +
Sbjct: 131 --------------------GGLQIH-----GKIFSDGFLSDSLLMTTLMDLYSTCENST 165
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE---KPDRHTLSSVLS 411
A F+ +P+++ +SWN L + Y +N+ + + LF +M+ + + KPD T L
Sbjct: 166 DACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQ 225
Query: 412 VCTGLVDLYLGKQMHQLVTKTVIPD-LPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C L L GKQ+H + + + L ++N+L++MYSRCG++ +A VF M+ ++V+
Sbjct: 226 ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVV 284
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
+W A+I G A +G +A+E F +M + I P T +L+AC+H+GLV EG F+ M
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
Query: 531 IN-DYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
+ ++ I+P + H+ VD+LGR L +A LI SM +KPD +W LLG+CRVHG+VE
Sbjct: 345 RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
Query: 590 LAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
L + LI L+ E +G YVLL N Y+ + W+ +R LM+EK + + G S ++
Sbjct: 405 LGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIE 462
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 22/173 (12%)
Query: 53 SEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMP-------QRDIVSWNLII 105
++A FD + R+TV+WN L S +++ + LFD+M + D V+ L +
Sbjct: 165 TDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLAL 224
Query: 106 SGYFSCCGSKFVEEGRKLFDEMPERDCVSW----NTVISGYAKNGRMDQALKLFDAMPER 161
+C ++ G+++ D + E NT++S Y++ G MD+A ++F M ER
Sbjct: 225 Q---ACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER 281
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM------PECDSASLSALISGLVRNG 208
N VS A+I+G +NG A+ F M PE +L+ L+S +G
Sbjct: 282 NVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPE--EQTLTGLLSACSHSG 332
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 159/396 (40%), Gaps = 80/396 (20%)
Query: 38 QWNKKISH---LIRTGRLS----EARTFFDSMKHRNTVTWNTLISGH-----VKRREIAK 85
+ N +SH +IR LS E F S++ +++ N L S +K ++
Sbjct: 72 RLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLG 131
Query: 86 ARQLFDEMPQRDIVSWNLIISG----YFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISG 141
Q+ ++ +S +L+++ Y +C S + K+FDE+P+RD VSWN + S
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENST---DACKVFDEIPKRDTVSWNVLFSC 188
Query: 142 YAKNGRMDQALKLFDAMP-------------------------------------ERNAV 164
Y +N R L LFD M + N +
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 165 S-----SNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG---ELDMAAGI 216
S SN +++ + G +D A F M E + S +ALISGL NG E A
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 217 LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
+L+ G E Q L++ SG V E FDR+ + + + + N+
Sbjct: 309 MLKFGISPEE-----QTLTGLLSACSHSGLVAEGMMFFDRMRSGE-------FKIKPNLH 356
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMGER-DTCAWNTMISGYVQISDMEEASKLFK---EM 332
+ ++ + + A L SM + D+ W T++ D+E ++ E+
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
+ +A + +++ ++ +G + + M +K +
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRI 452
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 268/559 (47%), Gaps = 84/559 (15%)
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
D V N++IS YAK R K+FD M R+ VS ++I +G + A+ K M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM- 139
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
G + K +LV + L G S KV A
Sbjct: 140 ---------YFYGFI--------------------PKSELVASLLALCTRMGSSSKV--A 168
Query: 251 RRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWN 310
R + D+ R + +V+ +++ Y+K D +A +FD M ++ +W
Sbjct: 169 RMFHALVLVDE--------RMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWT 220
Query: 311 TMISGYVQISDMEEASKLFKEM----------------PSPDALSWNSI----ISGFA-- 348
MISG V + E LF+ M P+ L++ S I GF+
Sbjct: 221 AMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFR 280
Query: 349 ------------------QIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
+ G++ +++ FE ++++ W+S+I+GY + D + L
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNL 340
Query: 391 FSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSR 449
+QM+ EG + + TL +++S CT L +H + K + + + N+LI MY++
Sbjct: 341 LNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAK 400
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
CG++ A VF E+ KD+++W++MI Y HG +ALE+FK M + + F++
Sbjct: 401 CGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLA 459
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
+L+AC HAGLVEE + F + Y + +EH+A ++++LGR G++ +A ++ +MP+K
Sbjct: 460 ILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMK 518
Query: 570 PDKAVWGALLGSCRVHGNVELA-QVAAQALISLEPESSGPYVLLYNMYANLELWDDAERV 628
P +W +LL +C HG +++A ++ A L+ EP++ YVLL ++ + AE V
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEV 578
Query: 629 RVLMEEKNVKKQTGYSWVD 647
R +M+ + + K G+S ++
Sbjct: 579 RRVMQRRKLNKCYGFSKIE 597
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 196/479 (40%), Gaps = 85/479 (17%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFD 125
+TV N+LIS + K R++FDEM RD VS+ II+ SCC + E KL
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIIN---SCCQDGLLYEAMKLIK 137
Query: 126 EM------PERDCVS----WNTVISGYAKNGRMDQALKL--------------------- 154
EM P+ + V+ T + +K RM AL L
Sbjct: 138 EMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK 197
Query: 155 ----------FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP-ECDSASLSALISG 203
FD M +N VS A+I+G + N + + V F+ M E + L+S
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 204 LVRNGELDMAAGILLECG-----DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
L EL+ + ++ E G L A+ T+ Y + G V +R LF+
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTM---YCRCGNVSLSRVLFETSK 314
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMIS 314
R+VV W+SM+ Y + GD L + M E ++ ++S
Sbjct: 315 -------------VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 315 GYVQISDMEEASKLFKEMPSPDALSW----NSIISGFAQIGDLKVAKDFFERMPQKNLIS 370
+ + AS + ++ +S N++I +A+ G L A++ F + +K+L+S
Sbjct: 362 ACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVS 421
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQL 428
W+S+I Y + A+E+F M G + D ++LS C GLV+ + +
Sbjct: 422 WSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVE-----EAQTI 476
Query: 429 VTKTVIPDLPIN----NSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
T+ +P+ I + R G I +A V M W++++ +HG
Sbjct: 477 FTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHG 535
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 154/408 (37%), Gaps = 96/408 (23%)
Query: 59 FDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCC-----G 113
FD M+ +N V+W +ISG V + LF M + ++ + + C G
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYG 267
Query: 114 SKFVEE--------------------------------GRKLFDEMPERDCVSWNTVISG 141
S V+E R LF+ RD V W+++ISG
Sbjct: 268 SSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISG 327
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALI 201
YA+ G + + L + M K E +S +L A++
Sbjct: 328 YAETGDCSEVMNLLNQMR---------------------------KEGIEANSVTLLAIV 360
Query: 202 SGLVRNGELDMAAGI---LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
S + L A+ + +L+CG H L+ N LI Y + G + AR +F +
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMS---HILLG--NALIDMYAKCGSLSAAREVFYELT 415
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMIS 314
+++VSW+SM+ Y G A E+F M E D A+ ++S
Sbjct: 416 -------------EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILS 462
Query: 315 GYVQISDMEEASKLFKEMPS---PDALS-WNSIISGFAQIGDLKVAKDFFERMPQK-NLI 369
+EEA +F + P L + I+ + G + A + MP K +
Sbjct: 463 ACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSAR 522
Query: 370 SWNSLIAGYDKNE--DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
W+SL++ + + D G I M+ E + P + L S + +G
Sbjct: 523 IWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 108/223 (48%), Gaps = 17/223 (7%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
R G +S +R F++ K R+ V W+++ISG+ + + ++ L ++M + I + ++ +
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 108 YFSCC-GSKFVEEGRKLFDEMPERDCVSW----NTVISGYAKNGRMDQALKLFDAMPERN 162
S C S + + ++ + +S N +I YAK G + A ++F + E++
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILL 218
VS +++I + L+G A+ FK M E D + A++S G ++ A I
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 219 ECGDGDEGKHDL---VQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+ GK+ + ++ Y I G+ GK+++A + +P
Sbjct: 479 Q-----AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMP 516
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 262/536 (48%), Gaps = 53/536 (9%)
Query: 120 GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDV 179
RKLFD PER WN++I YAK + L LF + + N L G
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDN-FTYACLARGFS 117
Query: 180 DSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIA 239
+S F + C A++SGL G CG + ++
Sbjct: 118 ES---FDTKGLRCIHGI--AIVSGL----------GFDQICG-------------SAIVK 149
Query: 240 GYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD 299
Y ++G + EA +LF IP+ ++ WN M++ Y G LF+
Sbjct: 150 AYSKAGLIVEASKLFCSIPDP-------------DLALWNVMILGYGCCGFWDKGINLFN 196
Query: 300 SM---GERDTC-AWNTMISGYVQISDMEEASKL--FKEMPSPDALSW--NSIISGFAQIG 351
M G + C + SG + S + A + F + D+ S+ ++++ +++
Sbjct: 197 LMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCM 256
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ A F + + +L++ +SLI GY + ++K A+ LF+++++ G+KPD ++ VL
Sbjct: 257 CIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLG 316
Query: 412 VCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVI 470
C L D GK++H V + + D+ + ++LI MYS+CG + A ++F + K+++
Sbjct: 317 SCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIV 375
Query: 471 TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSM 530
++N++I G HG A A E F ++ + + P ITF ++L C H+GL+ +G+ F M
Sbjct: 376 SFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
Query: 531 INDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVEL 590
+++GIEP+ EH+ V ++G G+L+EA + + S+ D + GALL C VH N L
Sbjct: 436 KSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHL 495
Query: 591 AQVAAQALISLEPESSGPY-VLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSW 645
A+V A+ + E Y V+L N+YA WD+ ER+R + E K G SW
Sbjct: 496 AEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 165/396 (41%), Gaps = 54/396 (13%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
L AR FD R+ WN++I + K + LF ++ + D N ++C
Sbjct: 56 LISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFT----YAC 111
Query: 112 CGSKFVEEGRKLFDEMPER-------------DCVSWNTVISGYAKNGRMDQALKLFDAM 158
F E FD R D + + ++ Y+K G + +A KLF ++
Sbjct: 112 LARGFSES----FDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSI 167
Query: 159 PERNAVSSNAVITGFLLNGDVDSAVGFFKRM------PECDSASLSALISGLVRNGELDM 212
P+ + N +I G+ G D + F M P C ++ AL SGL+ L +
Sbjct: 168 PDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNC--YTMVALTSGLIDPSLLLV 225
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
A + C + H V L+ Y + + A +F+ I
Sbjct: 226 AWSVHAFCLKINLDSHSYVGC--ALVNMYSRCMCIASACSVFNSISEP------------ 271
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSM---GERDTCAWNTMISGYV-----QISDMEE 324
++V+ +S++ Y + G+ A LF + G++ C ++ G +S E
Sbjct: 272 -DLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 325 ASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDY 384
S + + D +++I +++ G LK A F +P+KN++S+NSLI G +
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFA 390
Query: 385 KGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVD 418
A E F+++ G PD T S++L C +GL++
Sbjct: 391 STAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLN 426
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 170/593 (28%), Positives = 256/593 (43%), Gaps = 94/593 (15%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAK----ARQLFD 91
L WN +S L G L E FF + + G +K K ++QL
Sbjct: 180 LETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHC 239
Query: 92 EMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGR 147
++ +I N +IS Y C + E ++F + D VSWN +I AK+
Sbjct: 240 SATKKGLDCEISVVNSLISAYGKCGNTHMAE---RMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISG-LVR 206
+ALKLF +MPE + L V S V S I G L++
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVL---GVSSLVQLL---------SCGRQIHGMLIK 344
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
NG GI+L N LI Y + G +E++R FD I +
Sbjct: 345 NG---CETGIVLG---------------NALIDFYAKCGNLEDSRLCFDYIRD------- 379
Query: 267 DGRRFRRNVVSWNSMMMCYVK---------------------------------VGDIVS 293
+N+V WN+++ Y V ++
Sbjct: 380 ------KNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ 433
Query: 294 ARELFDSMGERDT-CAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISG-FAQIG 351
+ MG D ++++ Y + M +A L P ++ +I++G +++ G
Sbjct: 434 LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRG 493
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ + Q + +SWN IA +++ ++ IELF M +PD++T S+LS
Sbjct: 494 QYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILS 553
Query: 412 VCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDV 469
+C+ L DL LG +H L+TKT D + N LI MY +CG+I VF E + K++
Sbjct: 554 LCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNL 612
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
ITW A+I HG +ALE FK+ L P ++FIS+L AC H G+V+EG F
Sbjct: 613 ITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK 672
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSC 582
M DYG+EP ++H+ VD+L R G L+EA LI MP D VW L C
Sbjct: 673 M-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 226/492 (45%), Gaps = 69/492 (14%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSA 195
N +IS Y K G + A K+FD MPERN VS N +I G+ GDVD A G F M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQA----YNTLIAGYGQSGKVEEAR 251
+ +SGL+ LD+ AG L G K+ L A L+ YG+ +E A
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLH---GLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 252 RLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA----RELFDSMGERDTC 307
++F+ +P +++ +WN MM G + REL
Sbjct: 170 QVFEDMP-------------FKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES 216
Query: 308 AWNTMISGYVQISDMEEASKLF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
++ ++ G + D++ + +L K+ + NS+IS + + G+ +A+ F+
Sbjct: 217 SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 364 PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
+++SWN++I K+E+ A++LF M G P++ T SVL V + + L G+
Sbjct: 277 GSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 424 QMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASH 482
Q+H ++ K + + N+LI Y++CG + ++ F+ ++ K+++ WNA++ GYA+
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR-DKNIVCWNALLSGYANK 395
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI-------NDYG 535
+ L LF QM ++ PT TF + L +C L +Q +S+I NDY
Sbjct: 396 DGPI-CLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL-----QQLHSVIVRMGYEDNDYV 449
Query: 536 IEPRVEHFAS-------------------------FVDILGRQGQLQEAMDLINSMPVKP 570
+ + +A I R+GQ E++ LI+++ +P
Sbjct: 450 LSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QP 508
Query: 571 DKAVWGALLGSC 582
D W + +C
Sbjct: 509 DTVSWNIAIAAC 520
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 155/651 (23%), Positives = 278/651 (42%), Gaps = 108/651 (16%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N IS + G +S A FD M RN V++NT+I G+ K ++ KA +F EM +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFD-----EMPERDCVSWNTVISGYAKNGRMDQALKL 154
+SG S C S V G +L + D ++ Y + ++ A ++
Sbjct: 113 PNQSTVSGLLS-CASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGEL 210
F+ MP ++ + N +++ G + + FF+ + +S ++ G+ +L
Sbjct: 172 FEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDL 231
Query: 211 DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
D++ L C +G + N+LI+ YG+ G A R+F Q G D
Sbjct: 232 DISKQ--LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF------QDAGSWD--- 280
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE------RDTCAWNTMISGYVQI--SDM 322
+VSWN+++ K + + A +LF SM E + T +S VQ+
Sbjct: 281 ----IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
Query: 323 EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+ L K + N++I +A+ G+L+ ++ F+ + KN++ WN+L++GY N+
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGY-ANK 395
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-------VIP 435
D + LF QM G +P +T S+ L C + +L +Q+H ++ + V+
Sbjct: 396 DGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VTEL---QQLHSVIVRMGYEDNDYVLS 451
Query: 436 DLP--------INNSLITM------------------YSRCGAIGEACTVFNEMKFYKDV 469
L +N++L+ + YSR G E+ + + ++ D
Sbjct: 452 SLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDT 510
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHA----------GL 519
++WN I + + +ELFK M + I P TF+S+L+ C+ GL
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGL 570
Query: 520 VEEGRRQ------FNSMINDYGI---------------EPRVEHFASFVDILGRQGQLQE 558
+ + N +I+ YG E + + + + LG G QE
Sbjct: 571 ITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQE 630
Query: 559 AMDLIN---SMPVKPDKAVWGALLGSCRVHGNVELAQVAAQAL--ISLEPE 604
A++ S+ KPD+ + ++L +CR G V+ Q + +EPE
Sbjct: 631 ALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPE 681
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 24/357 (6%)
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
V N +I+ Y + G+V A ++FD++P RN VS+N+++ Y K GD
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMP-------------ERNKVSFNTIIKGYSKYGD 95
Query: 291 IVSARELFDSMGERDTCAWNTMISGYVQISDME-------EASKLFKEMPSPDALSWNSI 343
+ A +F M + +SG + + ++ L + DA +
Sbjct: 96 VDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCL 155
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
+ + ++ L++A+ FE MP K+L +WN +++ K + F ++ G
Sbjct: 156 LCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTE 215
Query: 404 HTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNE 462
+ VL + + DL + KQ+H TK + ++ + NSLI+ Y +CG A +F +
Sbjct: 216 SSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD 275
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEE 522
+ D+++WNA+I A + AL+LF M P T++SVL + L+
Sbjct: 276 AGSW-DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSC 334
Query: 523 GRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
G RQ + M+ G E + + +D + G L+++ + + K + W ALL
Sbjct: 335 G-RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDK-NIVCWNALL 389
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 178/662 (26%), Positives = 307/662 (46%), Gaps = 76/662 (11%)
Query: 30 DNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQL 89
+N S L++ N++I LI++G L A FD M R+ VT+N LISG+ + +A +L
Sbjct: 40 ENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIEL 99
Query: 90 FDEMPQRDIVSWNLIISGYFSCCGSK-FVEEGRKLFDEMPER----DCVSWNTVISGYAK 144
+ EM + S C + F EG ++ + + + ++ YA
Sbjct: 100 YAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYAC 159
Query: 145 NGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGL 204
+D ALKLFD M +RN N ++ F G+ + RM + G+
Sbjct: 160 LRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME----------LEGV 209
Query: 205 VRNGELDMAAGILLECGDGD----EGK--HDLVQ----------AYNTLIAGYGQSGKVE 248
+NG + ++ D EGK H LV N L+ Y G +
Sbjct: 210 AKNG---LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLS 266
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM---GERD 305
+ R F+ +P ++V+SWNS++ G ++ + +LF M G+R
Sbjct: 267 GSMRSFNAVP-------------EKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRP 313
Query: 306 T----------CAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKV 355
+ C+ N+ I QI K+ ++ S S ++I + + ++
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQIHCY--VLKMGFDVSSLHVQS--ALIDMYGKCNGIEN 369
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
+ ++ +P NL NSL+ K IE+F M EG D TLS+VL
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA--- 426
Query: 416 LVDLYLGKQMHQ--LVTKTVI-----PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
+ L L + +H LV I D+ ++ SLI Y++ G + VF+E+ +
Sbjct: 427 -LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD-TPN 484
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
+ ++I GYA +G+ D +++ ++M R+ + P +T +SVL+ C+H+GLVEEG F+
Sbjct: 485 IFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFD 544
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNV 588
S+ + YGI P + +A VD+LGR G +++A L+ D W +LL SCR+H N
Sbjct: 545 SLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNE 604
Query: 589 ELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDS 648
+ + AA+ L++LEPE+ Y+ + Y + ++ + ++R + + + ++ GYS V
Sbjct: 605 TIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Query: 649 SN 650
N
Sbjct: 665 KN 666
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 119/560 (21%), Positives = 227/560 (40%), Gaps = 72/560 (12%)
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSA 182
+E P + N I K+G + A + FD M R+ V+ N +I+G G A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 183 VGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLI 238
+ + M C +++ +++S V + EL GI + C G + + L+
Sbjct: 97 IELYAEMVSCGLRESASTFPSVLS--VCSDELFCREGIQVHCRVISLGFGCNMFVRSALV 154
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
Y V+ A +LFD + + RN+ N ++ C+ + G+ E++
Sbjct: 155 GLYACLRLVDVALKLFDEMLD-------------RNLAVCNLLLRCFCQTGESKRLFEVY 201
Query: 299 DSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIISGFAQ 349
M ++ + MI G + E +L + + N ++ ++
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 350 IGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
GDL + F +P+K++ISWNS+++ +++LFS+MQ G++P S
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 410 LSVCTGLVDLYLGKQMHQLVTKTV--IPDLPINNSLITMYSRCGAIGEACTVFNEMK--- 464
L+ C+ D+ GKQ+H V K + L + ++LI MY +C I + ++ +
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLN 381
Query: 465 ---------------FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH-PTYITFI 508
KD+I M G G +D + L +K L + P +
Sbjct: 382 LECCNSLMTSLMHCGITKDII---EMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSC 438
Query: 509 SVLNACA-----------HAGLVE----EGRRQFNSMINDYGIEPRVEHFASFVDILGRQ 553
++++ CA L++ G+ + + + D P + S ++ R
Sbjct: 439 TLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARN 498
Query: 554 GQLQEAMDLI---NSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGP-- 608
G + + ++ + M + PD+ ++L C G VE ++ +L S S G
Sbjct: 499 GMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKL 558
Query: 609 YVLLYNMYANLELWDDAERV 628
Y + ++ L + AER+
Sbjct: 559 YACMVDLLGRAGLVEKAERL 578
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 131/265 (49%), Gaps = 5/265 (1%)
Query: 326 SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
S +E PS + N I + G+L A + F+ M ++++++N LI+G +
Sbjct: 35 SSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSL 94
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLI 444
AIEL+++M G + T SVLSVC+ + G Q+H ++++ ++ + ++L+
Sbjct: 95 RAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALV 154
Query: 445 TMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
+Y+ + A +F+EM +++ N ++ + G + E++ +M+ +
Sbjct: 155 GLYACLRLVDVALKLFDEM-LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS-FVDILGRQGQLQEAMDLI 563
+T+ ++ C+H LV EG +Q +S++ G A+ VD G L +M
Sbjct: 214 LTYCYMIRGCSHDRLVYEG-KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSF 272
Query: 564 NSMPVKPDKAVWGALLGSCRVHGNV 588
N++P K D W +++ C +G+V
Sbjct: 273 NAVPEK-DVISWNSIVSVCADYGSV 296
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 255/510 (50%), Gaps = 54/510 (10%)
Query: 55 ARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDE------MPQRDIVSWNLII--S 106
R FDS+ N N++ K +L+++ MP D S+ ++I +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMP--DAFSFPVVIKSA 116
Query: 107 GYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
G F VE+ F +D N ++ Y K+ ++ A K+FD + +R
Sbjct: 117 GRFGILFQALVEK-LGFF-----KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEG 226
N +I+G+ G+ + A F MPE D S + +I+G + +L+ A D
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYF------DRM 224
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF--RRNVVSWNSMMMC 284
V ++N +++GY Q+G E+A RLF+ D R R N +W ++
Sbjct: 225 PEKSVVSWNAMLSGYAQNGFTEDALRLFN-----------DMLRLGVRPNETTWVIVISA 273
Query: 285 YVKVGDIVSARELFDSMGE---RDTCAWNT-MISGYVQISDMEEASKLFKEMPSP-DALS 339
D R L + E R C T ++ + + D++ A ++F E+ + + ++
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 340 WNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
WN++ISG+ +IGD+ A+ F+ MP++N++SWNSLIAGY N AIE F M G+
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 400 -KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNS----LITMYSRCGAIG 454
KPD T+ SVLS C + DL LG + + K I +N+S LI MY+R G +
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIK---LNDSGYRSLIFMYARGGNLW 450
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
EA VF+EMK +DV+++N + +A++G V+ L L +MK I P +T+ SVL AC
Sbjct: 451 EAKRVFDEMK-ERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTAC 509
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
AGL++EG+R F S+ N P +H+A
Sbjct: 510 NRAGLLKEGQRIFKSIRN-----PLADHYA 534
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 196/391 (50%), Gaps = 52/391 (13%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS 106
++ + AR FD + R WN +ISG+ K +A +LFD MP+ D+VSW ++I+
Sbjct: 147 VKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMIT 206
Query: 107 GYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSS 166
G+ K +E RK FD MPE+ VSWN ++SGYA+NG + AL+LF+ M R V
Sbjct: 207 GF---AKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML-RLGVRP 262
Query: 167 NAVITGFLLNGDVDSAVGFFKRMPECDSASLSALI-------SGLVRNGELDMAAGILLE 219
N T +++ V SA F R + SL LI + V+ LDM A +
Sbjct: 263 NE--TTWVI---VISACSF--RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHA----K 311
Query: 220 CGD--------GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
C D + G + +N +I+GY + G + AR+LFD +P
Sbjct: 312 CRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP------------- 358
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSM-----GERDTCAWNTMISGYVQISDMEEAS 326
+RNVVSWNS++ Y G A E F+ M + D +++S ++D+E
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 327 KLF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNE 382
+ K + + S+I +A+ G+L AK F+ M +++++S+N+L + N
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANG 478
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
D + L S+M+ EG +PDR T +SVL+ C
Sbjct: 479 DGVETLNLLSKMKDEGIEPDRVTYTSVLTAC 509
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 167/392 (42%), Gaps = 91/392 (23%)
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N ++ Y + VE AR++FD+I +G WN M+ Y K G+ A
Sbjct: 140 NVIMDMYVKHESVESARKVFDQISQRKGS-------------DWNVMISGYWKWGNKEEA 186
Query: 295 RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLK 354
+LFD M E D +W MI+G+ ++ D+E A K F MP +SWN+++SG+AQ G
Sbjct: 187 CKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNG--- 243
Query: 355 VAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
ED A+ LF+ M G +P+ T V+S C+
Sbjct: 244 -------------------------FTED---ALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 415 GLVDLYLGKQMHQLV-TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
D L + + +L+ K V + + +L+ M+++C I A +FNE+ ++++TWN
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
Query: 474 AMIGGYASHGLAVDALELFKQMKRLKI--------------------------------H 501
AMI GY G A +LF M + +
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 502 PTYITFISVLNACAHAGLVEEGR------RQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
P +T ISVL+AC H +E G R+ +ND G + S + + R G
Sbjct: 396 PDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSG-------YRSLIFMYARGGN 448
Query: 556 LQEAMDLINSMPVKPDKAVWGALLGSCRVHGN 587
L EA + + M + D + L + +G+
Sbjct: 449 LWEAKRVFDEMKER-DVVSYNTLFTAFAANGD 479
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 57/367 (15%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
WN IS + G EA FD M + V+W +I+G K +++ AR+ FD MP++ +
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV 229
Query: 99 VSWNLIISGYFSCCGSKFVEEGRKLFDEM----PERDCVSWNTVISG------------- 141
VSWN ++SGY + F E+ +LF++M + +W VIS
Sbjct: 230 VSWNAMLSGY---AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSL 286
Query: 142 ----------------------YAKNGRMDQALKLFDAM-PERNAVSSNAVITGFLLNGD 178
+AK + A ++F+ + +RN V+ NA+I+G+ GD
Sbjct: 287 VKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGD 346
Query: 179 VDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLI 238
+ SA F MP+ + S ++LI+G NG+ +A + D + K D V + L
Sbjct: 347 MSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
A G +E + D I +Q + G R S++ Y + G++ A+ +F
Sbjct: 407 AC-GHMADLELGDCIVDYIRKNQIKLNDSGYR---------SLIFMYARGGNLWEAKRVF 456
Query: 299 DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLK 354
D M ERD ++NT+ + + D E L +M PD +++ S+++ + G LK
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLK 516
Query: 355 VAKDFFE 361
+ F+
Sbjct: 517 EGQRIFK 523
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 185/318 (58%), Gaps = 17/318 (5%)
Query: 346 GFAQIGDLKV---------AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
G Q G L++ A+ F+ +PQ +++ W+ L+ GY + +E+F +M +
Sbjct: 152 GHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV 211
Query: 397 EGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIG 454
G +PD ++++ L+ C + L GK +H+ V K + D+ + +L+ MY++CG I
Sbjct: 212 RGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIE 271
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK-IHPTYITFISVLNA 513
A VF ++ ++V +W A+IGGYA++G A A +++R I P + + VL A
Sbjct: 272 TAVEVFEKLT-RRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA 573
CAH G +EEGR +M YGI P+ EH++ VD++ R G+L +A+DLI MP+KP +
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 574 VWGALLGSCRVHGNVELAQVAAQALISLEP----ESSGPYVLLYNMYANLELWDDAERVR 629
VWGALL CR H NVEL ++A Q L+ LE E V L N+Y +++ +A +VR
Sbjct: 391 VWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVR 450
Query: 630 VLMEEKNVKKQTGYSWVD 647
++E++ ++K G+S ++
Sbjct: 451 GMIEQRGIRKTPGWSLLE 468
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----PS 334
++ YV+ + AR++FD + + D W+ +++GYV+ E ++FKEM
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 335 PDALSWNSIISGFAQIGDL------------------------------------KVAKD 358
PD S + ++ AQ+G L + A +
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 359 FFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE-GEKPDRHTLSSVLSVCTGLV 417
FE++ ++N+ SW +LI GY K A +++ E G KPD L VL+ C
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 418 DLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAM 475
L G+ M + + + P + ++ + R G + +A + +M W A+
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Query: 476 IGGYASH 482
+ G +H
Sbjct: 396 LNGCRTH 402
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
Query: 77 HVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEM----PERD 131
+V+ + + AR++FDE+PQ D+V W+++++GY C GS EG ++F EM E D
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGS----EGLEVFKEMLVRGIEPD 217
Query: 132 CVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN-----GDVDSAVGFF 186
S T ++ A+ G + Q + + + ++ + S+ + L++ G +++AV F
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 187 KRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGK 246
+++ + S +ALI G G A L D K D V L A G
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVL-AACAHGGF 336
Query: 247 VEEARRLFDRIPNDQG 262
+EE R + + + G
Sbjct: 337 LEEGRTMLENMEARYG 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 118/307 (38%), Gaps = 73/307 (23%)
Query: 115 KFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFL 174
K + + RK+FDE+P+ D V W+ +++GY + G + L++F M R
Sbjct: 166 KLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI----------- 214
Query: 175 LNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY 234
E D S++ ++ + G L I H+ V+
Sbjct: 215 ----------------EPDEFSVTTALTACAQVGALAQGKWI-----------HEFVKKK 247
Query: 235 ----------NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMC 284
L+ Y + G +E A +F+++ RRNV SW +++
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT-------------RRNVFSWAALIGG 294
Query: 285 YVKVGDIVSARELFDSMGERDTCAWNTMI-----SGYVQISDMEEASKLFKEMP-----S 334
Y G A D + D ++++ + +EE + + M +
Sbjct: 295 YAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGIT 354
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS-WNSLIAGYDKNEDYKGAIELFSQ 393
P ++ I+ + G L A D E+MP K L S W +L+ G +++ + EL Q
Sbjct: 355 PKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG-ELAVQ 413
Query: 394 MQLEGEK 400
L+ EK
Sbjct: 414 NLLDLEK 420
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
L +AR FD + + V W+ L++G+V+ ++ ++F EM R I ++ +
Sbjct: 168 LFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTA 227
Query: 112 CGS-----------KFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPE 160
C +FV++ R + E D ++ YAK G ++ A+++F+ +
Sbjct: 228 CAQVGALAQGKWIHEFVKKKRWI-----ESDVFVGTALVDMYAKCGCIETAVEVFEKLTR 282
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRMP-----ECDSASLSALISGLVRNGELDMAAG 215
RN S A+I G+ G A R+ + DS L +++ G L+
Sbjct: 283 RNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRT 342
Query: 216 IL--LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+L +E G KH + Y+ ++ ++G++++A L +++P
Sbjct: 343 MLENMEARYGITPKH---EHYSCIVDLMCRAGRLDDALDLIEKMP 384
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRD-IVSWNLIIS 106
+ G + A F+ + RN +W LI G+ KA D + + D I ++++
Sbjct: 266 KCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLL 325
Query: 107 GYFSCCG-SKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRMDQALKLFDAMPE 160
G + C F+EEGR + + M R ++ ++ ++ + GR+D AL L + MP
Sbjct: 326 GVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPM 385
Query: 161 RNAVSSNAVITGFLLNG 177
+ S + G LLNG
Sbjct: 386 KPLAS----VWGALLNG 398
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 180/728 (24%), Positives = 320/728 (43%), Gaps = 151/728 (20%)
Query: 71 NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYF------SCCGSKFVEEGR-KL 123
N LIS +V+ + +AR++FD+MPQR+IV+ +S F S S+ ++ G ++
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTL-FGLSAVFEYVSMGSSLHSQIIKLGSFQM 84
Query: 124 FDEMP-----------ERDCVSW----------------------------NTVISGYAK 144
MP R CVS N +IS Y +
Sbjct: 85 IFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 145 NGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS-AVGFFKRMPECDSASLSALISG 203
G ++QA K+FD MP RN VS NA+ + + N D S A M S+ +
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 204 LVRNGEL--DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND- 260
LV+ + D+ G L G D V +++ Y G +E ARR+FD + N
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 261 ------------QGDGKEDGRRFRRNVV----------------------SW-------- 278
+ D EDG F RN++ S+
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 279 --------------NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEE 324
N+++ Y GD+ A +F + + +WN++ISG + E+
Sbjct: 325 RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQ 384
Query: 325 ASKLFKEM-----PSPDALSWNSIISGFAQ------------------------IG---- 351
A +++ + P PD ++++ IS A+ +G
Sbjct: 385 AMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLL 444
Query: 352 -------DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRH 404
+ + A+ F+ M +++++ W +I G+ + + + A++ F +M E + D
Sbjct: 445 SMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGF 504
Query: 405 TLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEM 463
+LSSV+ C+ + L G+ H L +T + + +L+ MY + G A T+F+ +
Sbjct: 505 SLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFS-L 563
Query: 464 KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
D+ WN+M+G Y+ HG+ AL F+Q+ P +T++S+L AC+H G +G
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQG 623
Query: 524 RRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA-VWGALLGSC 582
+ +N M + GI+ +H++ V+++ + G + EA++LI P ++A +W LL +C
Sbjct: 624 KFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSAC 682
Query: 583 RVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTG 642
N+++ AA+ ++ L+PE + ++LL N+YA W+D +R + K G
Sbjct: 683 VNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPG 742
Query: 643 YSWVDSSN 650
SW++ +N
Sbjct: 743 LSWIEVNN 750
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 178/427 (41%), Gaps = 76/427 (17%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNLII 105
G L AR FD + +R+ V WNT+I G +K +I F M + ++++++
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 106 SGYFSCCGSKFVEEGRKLFDEMPERDCVSW----NTVISGYAKNGRMDQALKLFDAMPER 161
+G C G+ + + D ++ N ++ Y G M +A +F +
Sbjct: 308 NG---CSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP 364
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM-----PECDSASLSALISGLVRNGELDMAAGI 216
N VS N++I+G NG + A+ ++R+ P D + SA IS G
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERF--VHGK 422
Query: 217 LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
LL G V TL++ Y ++ + E A+++FD + KE R+VV
Sbjct: 423 LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM-------KE------RDVV 469
Query: 277 SWNSMMMCYVKVGDIVSARELFDSM---------------------------GERDTC-- 307
W M++ + ++G+ A + F M GE C
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 308 ---AWNTMISGYVQISDM-------EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAK 357
++ ++S + DM E A +F +PD WNS++ ++Q G ++ A
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 358 DFFERMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC 413
FFE++ + +++ SL+A L++QM+ +G K S ++++
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLV 649
Query: 414 T--GLVD 418
+ GLVD
Sbjct: 650 SKAGLVD 656
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 179/296 (60%), Gaps = 8/296 (2%)
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
A+ F+ +PQ +++ W+ L+ GY + +E+F +M ++G +PD ++++ L+ C
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 416 LVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWN 473
+ L GK +H+ V K + D+ + +L+ MY++CG I A VF ++ ++V +W
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNVFSWA 289
Query: 474 AMIGGYASHGLAVDALELFKQMKRLK-IHPTYITFISVLNACAHAGLVEEGRRQFNSMIN 532
A+IGGYA++G A A+ ++++R I P + + VL ACAH G +EEGR +M
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 533 DYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQ 592
Y I P+ EH++ VD++ R G+L +A++LI MP+KP +VWGALL CR H NVEL +
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 593 VAAQALISLEP----ESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
+A + L+ LE E V L N+Y +++ +A +VR ++E++ V+K G+S
Sbjct: 410 LAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWS 465
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 25/254 (9%)
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
Y + + +AR++FD IP + +VV W+ +M YV+ G E+F
Sbjct: 162 YVEDKLLLDARKVFDEIP-------------QPDVVKWDVLMNGYVRCGLGSEGLEVFRE 208
Query: 301 MG----ERDTCAWNTMISGYVQISDMEEASKLF-----KEMPSPDALSWNSIISGFAQIG 351
M E D + T ++ Q+ + + + K D +++ +A+ G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 352 DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE-GEKPDRHTLSSVL 410
++ A + F+++ ++N+ SW +LI GY K A+ +++ E G KPD L VL
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL 328
Query: 411 SVCTGLVDLYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKD 468
+ C L G+ M + + + P + ++ + R G + +A + +M
Sbjct: 329 AACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL 388
Query: 469 VITWNAMIGGYASH 482
W A++ G +H
Sbjct: 389 ASVWGALLNGCRTH 402
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 94/187 (50%), Gaps = 7/187 (3%)
Query: 77 HVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEMPERDCVSW 135
+V+ + + AR++FDE+PQ D+V W+++++GY C GS+ +E R++ + E D S
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN-----GDVDSAVGFFKRMP 190
T ++ A+ G + Q + + + +++ + S+ + L++ G +++AV FK++
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 191 ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
+ S +ALI G G A L D K D V L A G +EE
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL-AACAHGGFLEEG 340
Query: 251 RRLFDRI 257
R + + +
Sbjct: 341 RSMLENM 347
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 52 LSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSC 111
L +AR FD + + V W+ L++G+V+ ++ ++F EM + + ++ +
Sbjct: 168 LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 112 CGS-------KFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV 164
C K++ E K E D ++ YAK G ++ A+++F + RN
Sbjct: 228 CAQVGALAQGKWIHEFVKK-KSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVF 286
Query: 165 SSNAVITGFLLNGDVDSAVGFFKRMP-----ECDSASLSALISGLVRNGELDMAAGILLE 219
S A+I G+ G A+ +R+ + DS L +++ G L+ +L
Sbjct: 287 SWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSML-- 344
Query: 220 CGDGDEGKHDLV---QAYNTLIAGYGQSGKVEEARRLFDRIP 258
+ E ++++ + Y+ ++ ++G++++A L +++P
Sbjct: 345 --ENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMP 384
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRD-IVSWNLIIS 106
+ G + A F + RN +W LI G+ KA + + + D I ++++
Sbjct: 266 KCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLL 325
Query: 107 GYFSCCG-SKFVEEGRKLFDEMPERDCVS-----WNTVISGYAKNGRMDQALKLFDAMPE 160
G + C F+EEGR + + M R ++ ++ ++ + GR+D AL L + MP
Sbjct: 326 GVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPM 385
Query: 161 RNAVSSNAVITGFLLNG 177
+ S + G LLNG
Sbjct: 386 KPLAS----VWGALLNG 398
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 181/317 (57%), Gaps = 8/317 (2%)
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
D N++I + A+ F+ M ++N++SWNS++ +N E F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 396 LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIG 454
+ PD T+ +LS C G +L LGK +H Q++ + + + + +L+ MY++ G +
Sbjct: 207 GKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 455 EACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELF-KQMKRLKIHPTYITFISVLNA 513
A VF M K+V TW+AMI G A +G A +AL+LF K MK + P Y+TF+ VL A
Sbjct: 265 YARLVFERM-VDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKA 573
C+H GLV++G + F+ M + I+P + H+ + VDILGR G+L EA D I MP +PD
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 574 VWGALLGSCRVHGNVE---LAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRV 630
VW LL +C +H + + + + + LI LEP+ SG V++ N +A +W +A VR
Sbjct: 384 VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRR 443
Query: 631 LMEEKNVKKQTGYSWVD 647
+M+E +KK G S ++
Sbjct: 444 VMKETKMKKIAGESCLE 460
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 20/296 (6%)
Query: 313 ISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWN 372
I G + +S ++ S + E+ +LS DL A+ +WN
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAK---------DLAFARTLLLHSSDSTPSTWN 82
Query: 373 SLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT 432
L GY ++ +I ++S+M+ G KP++ T +L C + L G+Q+ V K
Sbjct: 83 MLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKH 142
Query: 433 VIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALEL 491
D+ + N+LI +Y C +A VF+EM ++V++WN+++ +G E
Sbjct: 143 GFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMT-ERNVVSWNSIMTALVENGKLNLVFEC 201
Query: 492 FKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS-MINDYGIEPRVEHFASFVDIL 550
F +M + P T + +L+AC G + G+ + M+ + + R+ + VD+
Sbjct: 202 FCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVRELELNCRLG--TALVDMY 257
Query: 551 GRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
+ G L+ A + M V + W A++ +G A+ A Q + ESS
Sbjct: 258 AKSGGLEYARLVFERM-VDKNVWTWSAMIVGLAQYG---FAEEALQLFSKMMKESS 309
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 174/425 (40%), Gaps = 83/425 (19%)
Query: 5 LMRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKH 64
L+R+S L L + L H ++ S+ WN + E+ + MK
Sbjct: 51 LVRVSSLSLAKDLAFARTLLLHSSDSTPST----WNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 65 R----NTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKF 116
R N +T+ L+ + RQ+ E+ + D+ N +I Y +C K
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTC---KK 163
Query: 117 VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
+ RK+FDEM ER+ VSWN++++ +NG+++ + F M + + L
Sbjct: 164 TSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLL-- 221
Query: 177 GDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT 236
SA G + SL L+ V EL+ L C G
Sbjct: 222 ----SACG--------GNLSLGKLVHSQVMVRELE------LNCRLG-----------TA 252
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
L+ Y +SG +E AR +F+R+ + +NV +W++M++ + G A +
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVD-------------KNVWTWSAMIVGLAQYGFAEEALQ 299
Query: 297 LFDSMGERDT--------------CAWNTMI-SGYVQISDMEEASKLFKEMPSPDALSWN 341
LF M + + C+ ++ GY +ME+ K+ P + +
Sbjct: 300 LFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI-----KPMMIHYG 354
Query: 342 SIISGFAQIGDLKVAKDFFERMP-QKNLISWNSLIAG--YDKNEDYKGAIELFSQMQLEG 398
+++ + G L A DF ++MP + + + W +L++ +ED +G E + +E
Sbjct: 355 AMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIEL 414
Query: 399 EKPDR 403
E P R
Sbjct: 415 E-PKR 418
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 184/711 (25%), Positives = 325/711 (45%), Gaps = 116/711 (16%)
Query: 17 LCSRGLASFHKTNDNESSLLHQWNKKIS---HLIRTG-RLSEARTFFDSMKHRNTVTW-- 70
LCS+ A K ++S+ +W + +S + R G + ++ F K ++W
Sbjct: 5 LCSKLQALSSKIK--QASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLF 62
Query: 71 --NTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM- 127
N++ ++K ++ + FD M RD VSWN+I+ G F EEG F ++
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLD---YGFEEEGLWWFSKLR 119
Query: 128 -----PERD--------CVS-W----------------------NTVISGYAKNGRMDQA 151
P C S W N+++ YA + + A
Sbjct: 120 VWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SA 178
Query: 152 LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM-----PECDSASLSALISGLVR 206
KLFD M ER+ +S + VI ++ + + + FK M E D ++++++
Sbjct: 179 RKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAY--NTLIAGYGQSGKVEEARRLFDRIPNDQGDG 264
++D+ + G DL + N+LI Y + V+ A R+FD
Sbjct: 239 MEDIDVGRSVH---GFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTC----- 290
Query: 265 KEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEE 324
RN+VSWNS++ +V A E+F + M+ V++ ++
Sbjct: 291 --------RNIVSWNSILAGFVHNQRYDEALEMF-----------HLMVQEAVEVDEVTV 331
Query: 325 ASKL----FKEMPSP---------------DALSWNSIISGFAQIGDLKVAKDFFERMPQ 365
S L F E P P + ++ +S+I + + A + M
Sbjct: 332 VSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTY 391
Query: 366 KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM 425
K+++S +++I+G AI +F M+ + P+ T+ S+L+ C+ DL K
Sbjct: 392 KDVVSCSTMISGLAHAGRSDEAISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWA 448
Query: 426 HQLVTK--TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
H + + I D+ + S++ Y++CGAI A F+++ K++I+W +I YA +G
Sbjct: 449 HGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAING 507
Query: 484 LAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHF 543
L AL LF +MK+ P +T+++ L+AC H GLV++G F SM+ + +P ++H+
Sbjct: 508 LPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHY 566
Query: 544 ASFVDILGRQGQLQEAMDLINSMP--VKPDKAVWGALLGSC--RVHGNVELAQVAAQALI 599
+ VD+L R G++ A++LI ++P VK + WGA+L C R + ++V A+ L
Sbjct: 567 SCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL- 625
Query: 600 SLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVDSSN 650
LEP S Y+L + +A + W+D +R L++E+ V+ GYS V N
Sbjct: 626 ELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGN 676
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 185/342 (54%), Gaps = 5/342 (1%)
Query: 310 NTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
N+++ Y ++ A KLF E+P D +SWNSII+G + GD+ A F+ MP KN+I
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 370 SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
SWN +I+ Y + +I LF +M G + + TL +L+ C L G+ +H +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 430 TKTVI-PDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA 488
+T + + I+ +LI MY +C +G A +F+ + ++ +TWN MI + HG
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSI-RNKVTWNVMILAHCLHGRPEGG 335
Query: 489 LELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVD 548
LELF+ M + P +TF+ VL CA AGLV +G+ ++ M++++ I+P H +
Sbjct: 336 LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 549 ILGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPES 605
+ G +EA + + ++P V P+ W LL S R GN L + A++LI +P +
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLN 455
Query: 606 SGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
Y LL N+Y+ W+D RVR +++E+ + + G VD
Sbjct: 456 YKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVD 497
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 64/267 (23%)
Query: 109 FSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNA 168
++CCG+ ++ +KLF E+P+RD VSWN++I+G +NG + A KLFD MP++N +S N
Sbjct: 163 YTCCGA--LDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 169 VITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGD 224
+I+ +L + ++ F+ M + ++L L++ R+ L +G
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLK----------EGR 270
Query: 225 EGKHDLVQAY--------NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
L++ + LI YG+ +V ARR+FD + RN V
Sbjct: 271 SVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS-------------IRNKV 317
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPD 336
+WN M++ + G ELF++ MI+G M PD
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEA-----------MING----------------MLRPD 350
Query: 337 ALSWNSIISGFAQIGDLKVAKDFFERM 363
+++ ++ G A+ G + + ++ M
Sbjct: 351 EVTFVGVLCGCARAGLVSQGQSYYSLM 377
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 68/340 (20%)
Query: 166 SNAVITGFLLNGDVDSAVGF------FKRMPECDSASLSALISGLVRNGELDMAAGILLE 219
+N V +L++ A+GF F +P DS + +LIS + + +D +G +
Sbjct: 86 ANPVFKAYLVSSSPKQALGFYFDILRFGFVP--DSYTFVSLISCIEKTCCVD--SGKMCH 141
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
G ++ N+L+ Y G ++ A++LF IP +R++VSWN
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIP-------------KRDIVSWN 188
Query: 280 SMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM------- 332
S++ V+ GD+++A +LFD M +++ +WN MIS Y+ ++ + LF+EM
Sbjct: 189 SIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG 248
Query: 333 -PSPDALSWN-------------------------------SIISGFAQIGDLKVAKDFF 360
S L N ++I + + ++ +A+ F
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF 308
Query: 361 ERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVD 418
+ + +N ++WN +I + + +G +ELF M +PD T VL C GLV
Sbjct: 309 DSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVS 368
Query: 419 LYLGKQMHQLVTK--TVIPDLPINNSLITMYSRCGAIGEA 456
G+ + L+ + P+ + +YS G EA
Sbjct: 369 --QGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 74/282 (26%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
++SL+H + G L A+ F + R+ V+WN++I+G V+ ++ A +LFD
Sbjct: 156 QNSLMHMYTC-------CGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 92 EMPQRDIVSWNLIISGYF--------------------------------SCCGSKFVEE 119
EMP ++I+SWN++IS Y +C S ++E
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 120 GR----KLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
GR L V +I Y K + A ++FD++ RN V+ N +I L
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYN 235
+G + + F+ A+I+G++R E+ G+L CG G Q+Y
Sbjct: 329 HGRPEGGLELFE-----------AMINGMLRPDEVTF-VGVL--CGCARAGLVSQGQSYY 374
Query: 236 TLIAG-----------------YGQSGKVEEARRLFDRIPND 260
+L+ Y +G EEA +P++
Sbjct: 375 SLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDE 416
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 132/309 (42%), Gaps = 39/309 (12%)
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVT 430
N + Y + K A+ + + G PD +T S++S + GK H Q +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 431 KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDA-- 488
LP+ NSL+ MY+ CGA+ A +F E+ +D+++WN++I G +G + A
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIP-KRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 489 -----------------------------LELFKQMKRLKIHPTYITFISVLNACAHAGL 519
+ LF++M R T + +LNAC +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
++EGR S+I + + V + +D+ G+ ++ A + +S+ ++ +K W ++
Sbjct: 266 LKEGRSVHASLIRTF-LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMI 323
Query: 580 GSCRVHGNVELAQVAAQALIS--LEPESSGPYVLLYNMYANLELWDDAERVRVLM-EEKN 636
+ +HG E +A+I+ L P+ +V + A L + LM +E
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEV-TFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 637 VKKQTGYSW 645
+K G+ W
Sbjct: 383 IKPNFGHQW 391
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/588 (27%), Positives = 280/588 (47%), Gaps = 85/588 (14%)
Query: 68 VTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM 127
++ + L+ +K +I ARQ+FD M +R IV+WN +I+ SK E +L
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM--- 156
Query: 128 PERDCVSWNTVISGYAKNGRMDQALKLF-DAMPERNAVSSN--AVITGFLLNGDVDSAVG 184
++ N + Y + K F D E+ A S+ AVI G ++ + VG
Sbjct: 157 -----ITNNVLPDEYT----LSSVFKAFSDLSLEKEAQRSHGLAVILGLEVS---NVFVG 204
Query: 185 FFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQS 244
SAL+ V+ G+ A +L + D V LI GY Q
Sbjct: 205 -------------SALVDMYVKFGKTREAKLVLDRVEEKD------VVLITALIVGYSQK 245
Query: 245 GKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM--- 301
G+ EA + F + + + + N ++ S+++ + DI + + + M
Sbjct: 246 GEDTEAVKAFQSMLVE---------KVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS 296
Query: 302 -GERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
E + ++++ Y++ S ++++ ++FK + P+ +SW S+ISG Q G ++A F
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEF 356
Query: 361 ERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLY 420
+M + ++ KP+ TLSS L C+ L
Sbjct: 357 RKMMRDSI-------------------------------KPNSFTLSSALRGCSNLAMFE 385
Query: 421 LGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGY 479
G+Q+H +VTK D + LI +Y +CG A VF+ + DVI+ N MI Y
Sbjct: 386 EGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEV-DVISLNTMIYSY 444
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR 539
A +G +AL+LF++M L + P +T +SVL AC ++ LVEEG F+S D I
Sbjct: 445 AQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLT 503
Query: 540 VEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALI 599
+H+A VD+LGR G+L+EA +++ + + PD +W LL +C+VH VE+A+ + ++
Sbjct: 504 NDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKIL 562
Query: 600 SLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYSWVD 647
+EP G +L+ N+YA+ W+ ++ M++ +KK SWV+
Sbjct: 563 EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVE 610
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 13/278 (4%)
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
P +S + ++ + GD+ A+ F+ M ++++++WNSLIA K+ K A+E++ M
Sbjct: 97 PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 395 QLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINN-----SLITMYSR 449
PD +TLSSV DL L K+ + VI L ++N +L+ MY +
Sbjct: 157 ITNNVLPDEYTLSSVFK---AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVK 213
Query: 450 CGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
G EA V + ++ KDV+ A+I GY+ G +A++ F+ M K+ P T+ S
Sbjct: 214 FGKTREAKLVLDRVE-EKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
VL +C + + G+ M+ G E + S + + R + +++ + +
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKS-GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEY- 330
Query: 570 PDKAVWGALLGSCRVHGNVELAQVAAQALI--SLEPES 605
P++ W +L+ +G E+A + + ++ S++P S
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNS 368
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/484 (21%), Positives = 211/484 (43%), Gaps = 41/484 (8%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
+K + ++ G + AR FD M R+ VTWN+LI+ +K R +A +++ M +++
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 100 SWNLIISGYFSCCGSKFVEE------GRKLFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
+S F +E+ G + + + + ++ Y K G+ +A
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRM-PECDSASLSALISGLVRNGEL-D 211
+ D + E++ V A+I G+ G+ AV F+ M E + S L+ G L D
Sbjct: 223 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
Query: 212 MAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
+ G L+ G + + +L+ Y + V+++ R+F I
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYP----------- 331
Query: 272 RRNVVSWNSMMMCYVKVGD----IVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
N VSW S++ V+ G ++ R++ + ++ ++ + G ++ EE +
Sbjct: 332 --NQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 328 LF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNED 383
+ K D + + +I + + G +A+ F+ + + ++IS N++I Y +N
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINN-- 441
+ A++LF +M G +P+ T+ SVL C + G ++ K I + N+
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKI--MLTNDHY 507
Query: 442 -SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKR--L 498
++ + R G + EA + E+ D++ W ++ H +E+ +++ R L
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACKVH----RKVEMAERITRKIL 562
Query: 499 KIHP 502
+I P
Sbjct: 563 EIEP 566
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 30/246 (12%)
Query: 32 ESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFD 91
ES+L Q ++ +R + ++ F +++ N V+W +LISG V+ A F
Sbjct: 299 ESALASQ-TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 92 EMPQRDIVSWNLIISGYFSCCGS-KFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNG 146
+M + I + +S C + EEGR++ + +RD + + +I Y K G
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC-----DSASLSALI 201
D A +FD + E + +S N +I + NG A+ F+RM D LS L+
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 202 ----SGLVRNGELDMAAGILLECGDGDEGKHDLVQA----YNTLIAGYGQSGKVEEARRL 253
S LV G C D + D + Y ++ G++G++EEA L
Sbjct: 478 ACNNSRLVEEG-----------CELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEML 526
Query: 254 FDRIPN 259
+ N
Sbjct: 527 TTEVIN 532
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 154/644 (23%), Positives = 277/644 (43%), Gaps = 124/644 (19%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N+ I + G + +AR F+ M R+ +WN +I+ + + ++F M + +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 100 SWNLIISGYFSCCG------------------------------------SKFVEEGRKL 123
+ +G CG + + + R++
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 124 FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAV 183
FDE+ VSWN ++ Y + G D+A+ +F M E N N ++ +L A+
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 184 GFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQ 243
K + + LS + +V DM Y +
Sbjct: 280 EVGKVI-HAIAVKLSVVADTVVSTSVFDM----------------------------YVK 310
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
++E ARR+FD+ + +++ SW S M Y G ARELFD M E
Sbjct: 311 CDRLESARRVFDQTRS-------------KDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 304 RDTCAWNTMISGYVQISDMEEA----SKLFKEMPSPD--ALSW----------------- 340
R+ +WN M+ GYV + +EA + + +E+ + D L W
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 341 ----------------NSIISGFAQIGDLKVAKDFFERMPQ-KNLISWNSLIAGYDKNED 383
N+++ + + G L+ A +F +M + ++ +SWN+L+ G +
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGR 477
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ-LVTKTVIPDLPINNS 442
+ A+ F MQ+E KP ++TL+++L+ C + L LGK +H L+ D+ I +
Sbjct: 478 SEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGA 536
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
++ MYS+C A VF E +D+I WN++I G +G + + ELF ++ + P
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
++TF+ +L AC G VE G + F+SM Y I P+VEH+ +++ + G L + +
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEF 655
Query: 563 INSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALIS---LEP 603
+ MP P + + +C+ + +L AA+ L++ L+P
Sbjct: 656 LLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 165/618 (26%), Positives = 283/618 (45%), Gaps = 80/618 (12%)
Query: 77 HVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM----PERDC 132
H++ ++KA + P+ VS+ L + SC V + RK+ + P
Sbjct: 39 HLEGGNVSKAVSVLFASPEP--VSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPI 96
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC 192
N I Y K G +D A +LF+ MPER+ S NAVIT NG D F+RM
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 193 DSASLSALISGLVRNGELDMAAGIL--LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEA 250
+ +G++++ L + +L L C G V +++ YG+ + +A
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 251 RRLFDRIPN--------------DQGDGKEDGRRFRR----NVVSWNS-----MMMC--- 284
RR+FD I N + G E F + NV N M+ C
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 285 -YVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSI 343
++VG ++ A + S+ DT ++ YV+ +E A ++F + S D SW S
Sbjct: 277 LALEVGKVIHAIAVKLSVVA-DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 344 ISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
+SG+A G + A++ F+ MP++N++SWN+++ GY ++ A++ + M+ E E D
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 404 HTLSSVLSVCTGLVDLYLGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVFNE 462
TL +L+VC+G+ D+ +GKQ H + + ++ + N+L+ MY +CG + A F +
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 463 MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACA------- 515
M +D ++WNA++ G A G + AL F+ M+ ++ P+ T ++L CA
Sbjct: 456 MSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNL 514
Query: 516 ----HAGLVEEGRR----QFNSMIN--------DYGIEPRVEHFASFVDIL--------- 550
H L+ +G + +M++ DY IE E A+ D++
Sbjct: 515 GKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKE--AATRDLILWNSIIRGC 572
Query: 551 ---GRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVEL-----AQVAAQALISLE 602
GR ++ E L+ + VKPD + +L +C G+VEL + ++ + IS +
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQ 632
Query: 603 PESSGPYVLLYNMYANLE 620
E + LY Y L
Sbjct: 633 VEHYDCMIELYCKYGCLH 650
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 151/392 (38%), Gaps = 73/392 (18%)
Query: 18 CSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGH 77
C R ++ + S L W +S +G EAR FD M RN V+WN ++ G+
Sbjct: 311 CDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGY 370
Query: 78 VKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRK----LFDEMPE 129
V E +A M Q D V+ I++ C G V+ G++ ++ +
Sbjct: 371 VHAHEWDEALDFLTLMRQEIENIDNVTLVWILN---VCSGISDVQMGKQAHGFIYRHGYD 427
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAMPE-RNAVSSNAVITGFLLNGDVDSAVGFFKR 188
+ + N ++ Y K G + A F M E R+ VS NA++TG G + A+ FF+
Sbjct: 428 TNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEG 487
Query: 189 M---PECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
M + +L+ L++G L++ I
Sbjct: 488 MQVEAKPSKYTLATLLAGCANIPALNLGKAI----------------------------- 518
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERD 305
G DG ++ +VV +M+ Y K A E+F RD
Sbjct: 519 ---------------HGFLIRDG--YKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRD 561
Query: 306 TCAWNTMISGYVQISDMEEASKLF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFFE 361
WN++I G + +E +LF E PD +++ I+ + G +++ +F
Sbjct: 562 LILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFS 621
Query: 362 RMPQKNLISWNSLIAGYDKNEDYKGAIELFSQ 393
M K IS + E Y IEL+ +
Sbjct: 622 SMSTKYHIS--------PQVEHYDCMIELYCK 645
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 181/326 (55%), Gaps = 18/326 (5%)
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGY----DK-NEDYKGAIELFS 392
L +++ +A+ GDL+ A+ F+ MP++ ++WN++I GY DK N + + A+ LF
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 393 QMQL--EGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTK---TVIPDLPINNSLITMY 447
+ G +P T+ VLS + L +G +H + K T D+ I +L+ MY
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
S+CG + A +VF MK K+V TW +M G A +G + L +M I P ITF
Sbjct: 268 SKCGCLNNAFSVFELMKV-KNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITF 326
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
S+L+A H GLVEEG F SM +G+ P +EH+ VD+LG+ G++QEA I +MP
Sbjct: 327 TSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPES---SGP----YVLLYNMYANLE 620
+KPD + +L +C ++G + + +AL+ +E E SG YV L N+ A+
Sbjct: 387 IKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKG 446
Query: 621 LWDDAERVRVLMEEKNVKKQTGYSWV 646
W + E++R M+E+ +K + GYS+V
Sbjct: 447 KWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 52/262 (19%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS 106
+R GR+ + + + TL+ + K ++ AR++FDEMP+R V+WN +I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 107 GY--------------------FSCCGS-------------------KFVEEGRKLFDEM 127
GY FSCCGS +E G + +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 128 ------PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDS 181
PE D ++ Y+K G ++ A +F+ M +N + ++ TG LNG +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 182 AVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGI-LLECGDGDEGKHDLVQAYNT 236
RM E + + ++L+S G ++ GI L + G +++ Y
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVE--EGIELFKSMKTRFGVTPVIEHYGC 364
Query: 237 LIAGYGQSGKVEEARRLFDRIP 258
++ G++G+++EA + +P
Sbjct: 365 IVDLLGKAGRIQEAYQFILAMP 386
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 111/298 (37%), Gaps = 60/298 (20%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD-----MEEASKLFKEM- 332
+++ Y K GD+ AR++FD M ER + WN MI GY D +A LF+
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 333 ------------------------------------------PSPDALSWNSIISGFAQI 350
P D +++ +++
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 351 GDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
G L A FE M KN+ +W S+ G N L ++M G KP+ T +S+L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 411 SVC--TGLVD--LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFY 466
S GLV+ + L K M V P + ++ + + G I EA M
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRF--GVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYIT------FISVLNACAHAG 518
D I ++ + +G V E+ K + ++ ++ ++++ N AH G
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKG 446
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 172/305 (56%), Gaps = 3/305 (0%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
++++ + +G L A+ F+ MP ++ + + ++ GY + + + +F +M G
Sbjct: 173 SALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFA 232
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQ-LVTKTVIPDLPINNSLITMYSRCGAIGEACTV 459
D + S+L C L L GK +H + + L + N++ MY +C + A TV
Sbjct: 233 LDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTV 292
Query: 460 FNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
F M +DVI+W+++I GY G V + +LF +M + I P +TF+ VL+ACAH GL
Sbjct: 293 FVNMS-RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGL 351
Query: 520 VEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
VE+ F ++ +Y I P ++H+AS D + R G L+EA + MPVKPD+AV GA+L
Sbjct: 352 VEKSWLYFR-LMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVL 410
Query: 580 GSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKK 639
C+V+GNVE+ + A+ LI L+P + YV L +Y+ +D+AE +R M+EK + K
Sbjct: 411 SGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 470
Query: 640 QTGYS 644
G S
Sbjct: 471 VPGCS 475
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 45/424 (10%)
Query: 64 HRNTVTWNTLISGHVKRREI-AKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRK 122
+ N V + L+ + K + + +F MP R+I SWN+II G FS G F +
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIII-GEFSRSG--FASKSID 119
Query: 123 LFDEMPERDCVSWNTVI----------SGYAKNGRMDQALKLFDAMPERNAVSSNAVITG 172
LF M CV + S AK+G + L L VSS VI
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIM- 178
Query: 173 FLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQ 232
++ G + A F MP DS +A+ G V+ GE + + E G +V
Sbjct: 179 YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVM 238
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR----NVVSWNSMMMCYVKV 288
+L+ GQ G ++ + + G RR + N++ YVK
Sbjct: 239 V--SLLMACGQLGALKHGKSV-------------HGWCIRRCSCLGLNLGNAITDMYVKC 283
Query: 289 GDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSII 344
+ A +F +M RD +W+++I GY D+ + KLF EM P+A+++ ++
Sbjct: 284 SILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVL 343
Query: 345 SGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIE----LFSQMQLEGEK 400
S A G ++ + +F M + N++ A G +E M + K
Sbjct: 344 SACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPV---K 400
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVF 460
PD + +VLS C ++ +G+++ + + + +L +YS G EA ++
Sbjct: 401 PDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLR 460
Query: 461 NEMK 464
MK
Sbjct: 461 QWMK 464
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG-EKPDRHTLSSVLSVCTGLVD 418
F MP +N+ SWN +I + ++ +I+LF +M E +PD TL +L C+ +
Sbjct: 90 FWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASRE 149
Query: 419 LYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
G +H L K L ++++L+ MY G + A +F++M +D + + AM G
Sbjct: 150 AKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV-RDSVLYTAMFG 208
Query: 478 GYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
GY G A+ L +F++M + +S+L AC G ++ G+
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 157/403 (38%), Gaps = 86/403 (21%)
Query: 24 SFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREI 83
+F +N SS L K++HL T + + F M +RN +WN +I +
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLNHLFPT-----SLSVFWHMPYRNIFSWNIIIGEFSRSGFA 114
Query: 84 AKARQLFDEMPQRDIV-----SWNLIISGYFSCCGSKFVEEG------------------ 120
+K+ LF M + V + LI+ +C S+ + G
Sbjct: 115 SKSIDLFLRMWRESCVRPDDFTLPLILR---ACSASREAKSGDLIHVLCLKLGFSSSLFV 171
Query: 121 -----------------RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNA 163
RKLFD+MP RD V + + GY + G L +F M
Sbjct: 172 SSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGF 231
Query: 164 VSSNAVITGFLLN-GDV------DSAVGFFKRMPECDSASLSALISGL-VRNGELDMAAG 215
+ V+ L+ G + S G+ R C +L I+ + V+ LD A
Sbjct: 232 ALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHT 291
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
+ + D V ++++LI GYG G V + +LFD + +G E N
Sbjct: 292 VFVNMSRRD------VISWSSLILGYGLDGDVVMSFKLFDEMLK---EGIEP------NA 336
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD-------MEEASKL 328
V++ ++ G + + F M E + + Y ++D +EEA K
Sbjct: 337 VTFLGVLSACAHGGLVEKSWLYFRLMQEYNIV---PELKHYASVADCMSRAGLLEEAEKF 393
Query: 329 FKEMP-SPDALSWNSIISGFAQIGDL----KVAKDFFERMPQK 366
++MP PD +++SG G++ +VA++ + P+K
Sbjct: 394 LEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRK 436
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 217/416 (52%), Gaps = 53/416 (12%)
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEA----SKLFKE 331
+S +++ Y K G +V + +F+S+ E+D +WN ++SG+++ +EA + +++E
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 332 MPSPDALSWNSIISGFAQIGDLKVAK---------------------DFF-------ERM 363
+ +S++ A + L+ K F+ E M
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 364 PQKNLIS-------WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
N ++ NSLI+G +N +YK A L S+ ++P+ LSS L+ C+
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR-----QRPNVRVLSSSLAGCSDN 294
Query: 417 VDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAM 475
DL++GKQ+H + + + D + N L+ MY +CG I +A T+F + K V++W +M
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP-SKSVVSWTSM 353
Query: 476 IGGYASHGLAVDALELFKQM--KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
I YA +G V ALE+F++M + + P +TF+ V++ACAHAGLV+EG+ F M
Sbjct: 354 IDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Query: 534 YGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDK----AVWGALLGSCRVHGNVE 589
Y + P EH+ F+DIL + G+ +E L+ M ++ A+W A+L +C ++ ++
Sbjct: 414 YRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLT 473
Query: 590 LAQVAAQALI-SLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVKKQTGYS 644
+ A+ L+ PE++ YVL+ N YA + WD E +R ++ K + K G+S
Sbjct: 474 RGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 128/260 (49%), Gaps = 7/260 (2%)
Query: 328 LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGA 387
+ K+ +S ++I +++ G L + FE + +K+L+SWN+L++G+ +N K A
Sbjct: 110 MIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEA 169
Query: 388 IELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMY 447
+ +F+ M E + TLSSV+ C L L GKQ+H +V T + + ++I+ Y
Sbjct: 170 LGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFY 229
Query: 448 SRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
S G I EA V+N + + D + N++I G + + E F M R + P
Sbjct: 230 SSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNR---NYKEAFLLMSRQR--PNVRVL 284
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP 567
S L C+ + G +Q + + G + +D+ G+ GQ+ +A + ++P
Sbjct: 285 SSSLAGCSDNSDLWIG-KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Query: 568 VKPDKAVWGALLGSCRVHGN 587
K + W +++ + V+G+
Sbjct: 344 SKSVVS-WTSMIDAYAVNGD 362
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 46/324 (14%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G L ++ F+S++ ++ V+WN L+SG ++ + +A +F M + + +S
Sbjct: 131 KYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSS 190
Query: 108 YFSCCGS-KFVEEGRKLFDE--MPERDCVSWNT-VISGYAKNGRMDQALKLFDAM-PERN 162
C S K +++G+++ + RD V T +IS Y+ G +++A+K+++++ +
Sbjct: 191 VVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTD 250
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGD 222
V N++I+G + N + A R + LS+ ++G N D+ G + C
Sbjct: 251 EVMLNSLISGCIRNRNYKEAFLLMSRQRP-NVRVLSSSLAGCSDNS--DLWIGKQIHCVA 307
Query: 223 GDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM 282
G + N L+ YG+ G++ +AR +F IP+ ++VVSW SM+
Sbjct: 308 LRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPS-------------KSVVSWTSMI 354
Query: 283 MCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNS 342
Y GD V A E+F R+ C EE S + P+++++
Sbjct: 355 DAYAVNGDGVKALEIF-----REMC---------------EEGSGVL-----PNSVTFLV 389
Query: 343 IISGFAQIGDLKVAKDFFERMPQK 366
+IS A G +K K+ F M +K
Sbjct: 390 VISACAHAGLVKEGKECFGMMKEK 413
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 170/401 (42%), Gaps = 83/401 (20%)
Query: 90 FDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMD 149
F + + S NL++ F F LFDE+P+RD S N+ +S + ++G +
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFI---RNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPN 66
Query: 150 QALKLF----DAMPERNAVSSNAVITGFLL-----NGDVDSAVGFFKRMPECDSASLSAL 200
L LF A P+ ++ + V+ L G A+ K+ E + S +AL
Sbjct: 67 DTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHAL-MIKQGAETGTISKTAL 125
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND 260
I + G L + + + E K DLV ++N L++G+ ++GK +EA +F + +
Sbjct: 126 IDMYSKYGHLVDSVRVF----ESVEEK-DLV-SWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 261 QGDGKE-----------------DGRRF--------RRNVVSWNSMMMCYVKVGDIVSAR 295
+ + E G++ R VV +M+ Y VG I A
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 296 ELFDSMG-ERDTCAWNTMISGYVQISDMEEASKLF-KEMPSPDALS------------W- 340
++++S+ D N++ISG ++ + +EA L ++ P+ LS W
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWI 299
Query: 341 --------------------NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDK 380
N ++ + + G + A+ F +P K+++SW S+I Y
Sbjct: 300 GKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAV 359
Query: 381 NEDYKGAIELFSQMQLEGEK--PDRHTLSSVLSVC--TGLV 417
N D A+E+F +M EG P+ T V+S C GLV
Sbjct: 360 NGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLV 400
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 34/235 (14%)
Query: 43 ISHLIRTGRLSEARTFFDSMK-HRNTVTWNTLISGHVKRREIAKARQLFD-EMPQRDIVS 100
IS G ++EA ++S+ H + V N+LISG ++ R +A L + P ++S
Sbjct: 226 ISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLS 285
Query: 101 WNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISG----YAKNGRMDQALKLFD 156
+L C + + G+++ VS + + +G Y K G++ QA +F
Sbjct: 286 SSLA-----GCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFR 340
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE------CDSASLSALIS-----GLV 205
A+P ++ VS ++I + +NGD A+ F+ M E +S + +IS GLV
Sbjct: 341 AIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLV 400
Query: 206 RNGELDMAAGILLECGDGDEGKHDLV---QAYNTLIAGYGQSGKVEEARRLFDRI 257
+ G+ EC + K+ LV + Y I ++G+ EE RL +R+
Sbjct: 401 KEGK---------ECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 273/570 (47%), Gaps = 59/570 (10%)
Query: 50 GRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV----SWNLII 105
G +S +R F+ M RN V+W +L+ G+ + E + ++ M + S +L+I
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 106 SGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
S SC K GR++ ++ E N++IS G +D A +FD M ER
Sbjct: 151 S---SCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER 207
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAA--- 214
+ +S N++ + NG ++ + F M E +S ++S L+S L G +D
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL---GHVDHQKWGR 264
Query: 215 ---GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRF 271
G++++ G +V NTL+ Y +G+ EA +F ++P
Sbjct: 265 GIHGLVVKM-----GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT------------ 307
Query: 272 RRNVVSWNSMMMCYVKVGDIVSARELFDSM-GERDTCAWNTMISGYVQ--ISDMEEASKL 328
++++SWNS+M +V G + A L SM + + T S D E ++
Sbjct: 308 -KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366
Query: 329 FKEMPSPDALSWNSII-----SGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNED 383
+ L +N II S + +IG++ ++ +MP++++++WN+LI GY ++ED
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLY-LGKQMHQ-LVTKTVIPDLPINN 441
A+ F M++EG + T+ SVLS C DL GK +H +V+ D + N
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKN 486
Query: 442 SLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
SLITMY++CG + + +FN + +++ITWNAM+ A HG + L+L +M+ +
Sbjct: 487 SLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
+F L+A A ++EEG +Q + + G E F + D+ + G++ E +
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 604
Query: 562 LINSMPVKPDKAV--WGALLGSCRVHGNVE 589
+ +P ++++ W L+ + HG E
Sbjct: 605 M---LPPSVNRSLPSWNILISALGRHGYFE 631
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 144/580 (24%), Positives = 244/580 (42%), Gaps = 102/580 (17%)
Query: 62 MKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG--SKFVEE 119
M RN V+WNT++SG V+ + + F +M I + +I+ + CG E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 120 GRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
G ++ + + D ++ Y G + + K+F+ MP+RN VS +++ G+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 176 NGDVDSAVGFFKRM----PECDSASLSALIS--GLVRNGELDMAAGILLECGDGDEGKHD 229
G+ + + +K M C+ S+S +IS GL+++ L I G E K
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQI-IGQVVKSGLESK-- 177
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
+ N+LI+ G G V+ A +FD++ R+ +SWNS+ Y + G
Sbjct: 178 -LAVENSLISMLGSMGNVDYANYIFDQMS-------------ERDTISWNSIAAAYAQNG 223
Query: 290 DIVSARELFDSM-------------------GERD--------------------TCAWN 310
I + +F M G D C N
Sbjct: 224 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 283
Query: 311 TMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS 370
T++ Y EA+ +FK+MP+ D +SWNS+++ F G
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG------------------- 324
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
++ D A+ L M G+ + T +S L+ C G+ +H LV
Sbjct: 325 ---------RSLD---ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 372
Query: 431 KT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDAL 489
+ + + I N+L++MY + G + E+ V +M +DV+ WNA+IGGYA AL
Sbjct: 373 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKAL 431
Query: 490 ELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDI 549
F+ M+ + YIT +SVL+AC G + E + ++ I G E S + +
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 491
Query: 550 LGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
+ G L + DL N + + + W A+L + HG+ E
Sbjct: 492 YAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 530
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 223/564 (39%), Gaps = 134/564 (23%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLIS-----GHVKR--REIAKARQLFDE 92
N IS L G + A FD M R+T++WN++ + GH++ R + R+ DE
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 93 MPQRDIVS------------WNLIISGYFSCCGSKFV-----------------EEGRKL 123
+ + + W I G G V E +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 124 FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVIT-------- 171
F +MP +D +SWN++++ + +GR AL L +M N V+ + +
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 172 --GFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
G +L+G V + F+ ++ +AL+S + GE+ + +LL+ D
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGEMSESRRVLLQMPRRD----- 410
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPND------------------QGDGKEDGRRF 271
V A+N LI GY + ++A F + + GD E G+
Sbjct: 411 -VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 469
Query: 272 RRNVVSW---------NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
+VS NS++ Y K GD+ S+++LF+ + R+ WN M++
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 529
Query: 323 EEASKLFKEM----PSPDALSWNSIISGFAQIGDLK----------------------VA 356
EE KL +M S D S++ +S A++ L+ A
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 357 KDFFER----------MP---QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
D + + +P ++L SWN LI+ ++ ++ F +M G KP
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Query: 404 HTLSSVLSVCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSL--ITMYSRCGAIGEACTV 459
T S+L+ C+ GLVD G + ++ + + I + + I + R G + EA T
Sbjct: 650 VTFVSLLTACSHGGLVD--KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 707
Query: 460 FNEMKFYKDVITWNAMIGGYASHG 483
++M + + W +++ HG
Sbjct: 708 ISKMPMKPNDLVWRSLLASCKIHG 731
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 13/272 (4%)
Query: 3 TCLMRLSRLQLPRTLCSRG--LASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFD 60
T + LS LP L RG L ++ + ES H N I+ + G LS ++ F+
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMYAKCGDLSSSQDLFN 506
Query: 61 SMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS-GYFSCCGSKFVEE 119
+ +RN +TWN +++ + + +L +M + S G + +EE
Sbjct: 507 GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 566
Query: 120 GRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
G++L E D +N Y+K G + + +K+ R+ S N +I+
Sbjct: 567 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 626
Query: 176 NGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
+G + F M E + +L++ G +D + D G +
Sbjct: 627 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA-YYDMIARDFGLEPAI 685
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
+ +I G+SG++ EA ++P D
Sbjct: 686 EHCICVIDLLGRSGRLAEAETFISKMPMKPND 717
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/547 (25%), Positives = 254/547 (46%), Gaps = 45/547 (8%)
Query: 42 KISHLIRT-GRLSEARTFFDSMKHRNTVTWNTLISGHV--KRREIAKARQLFDEMPQRDI 98
K+ H+ G + +A+ FD N +WN L+ G V ++ F EM + +
Sbjct: 151 KLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGV 210
Query: 99 VSWNLIISGYF-SCCGSKFVEEGRK---------LFDEMPERDCVSWNTVISGYAKNGRM 148
+S F S G+ + +G K LF+ + + +++ Y K G++
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK-----TSLVDMYFKCGKV 265
Query: 149 DQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNG 208
A ++FD + ER+ V A+I G N A+G F+ M + +++I +
Sbjct: 266 GLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
D+ A L G E ++++ N + + SG ++ L+ + GD
Sbjct: 326 LGDVKALKL-----GKEVHAHVLKSKNYVEQPFVHSGLID----LYCKC----GDMASGR 372
Query: 269 RRF----RRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQIS 320
R F +RN +SW ++M Y G A M + D T++ ++
Sbjct: 373 RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 321 DMEEASKL----FKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIA 376
+++ ++ K + P+ S++ +++ G + F+R+ Q+N+ +W ++I
Sbjct: 433 AIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMID 492
Query: 377 GYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPD 436
Y +N D + IE+F M L +PD T+ VL+VC+ L L LGK++H + K
Sbjct: 493 CYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFES 552
Query: 437 LP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
+P ++ +I MY +CG + A F+ + K +TW A+I Y + L DA+ F+QM
Sbjct: 553 IPFVSARIIKMYGKCGDLRSANFSFDAVAV-KGSLTWTAIIEAYGCNELFRDAINCFEQM 611
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
P TF +VL+ C+ AG V+E R FN M+ Y ++P EH++ +++L R G+
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGR 671
Query: 556 LQEAMDL 562
++EA L
Sbjct: 672 VEEAQRL 678
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 47/344 (13%)
Query: 279 NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDAL 338
S++ Y K G + AR +FD + ERD W MI+G EA LF+ M S + +
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 339 SWNSII-------------------------------------SG----FAQIGDLKVAK 357
NS+I SG + + GD+ +
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGR 372
Query: 358 DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
F Q+N ISW +L++GY N + A+ MQ EG +PD T+++VL VC L
Sbjct: 373 RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 418 DLYLGKQMHQLVTKTV-IPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMI 476
+ GK++H K + +P++ + SL+ MYS+CG +F+ ++ ++V W AMI
Sbjct: 433 AIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAWTAMI 491
Query: 477 GGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI-NDYG 535
Y + +E+F+ M K P +T VL C+ ++ G+ ++ ++
Sbjct: 492 DCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFE 551
Query: 536 IEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL 579
P V A + + G+ G L+ A +++ VK W A++
Sbjct: 552 SIPFVS--ARIIKMYGKCGDLRSANFSFDAVAVK-GSLTWTAII 592
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 6/209 (2%)
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTV 433
I + + + + A+ + ++ G + T S++L C L GKQ+H + +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 434 IPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLA--VDALEL 491
+ + L+ MY+ CG++ +A VF+E +V +WNA++ G G D L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDEST-SSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 492 FKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILG 551
F +M+ L + + +V + A A + +G + I + G+ V S VD+
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKN-GLFNSVFLKTSLVDMYF 260
Query: 552 RQGQLQEAMDLINSMPVKPDKAVWGALLG 580
+ G++ A + + + V+ D VWGA++
Sbjct: 261 KCGKVGLARRVFDEI-VERDIVVWGAMIA 288
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 151/269 (56%), Gaps = 3/269 (1%)
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP 364
D NT++ Y + + K+F +MP +SW +++ G L A+ F +MP
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMP 212
Query: 365 QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
+N++SW ++I Y KN A +LF +MQ++ KP+ T+ ++L T L L +G+
Sbjct: 213 MRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRW 272
Query: 425 MHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHG 483
+H K + D + +LI MYS+CG++ +A VF+ M+ K + TWN+MI HG
Sbjct: 273 VHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ-GKSLATWNSMITSLGVHG 331
Query: 484 LAVDALELFKQMKRL-KIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
+AL LF++M+ + P ITF+ VL+ACA+ G V++G R F MI YGI P EH
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREH 391
Query: 543 FASFVDILGRQGQLQEAMDLINSMPVKPD 571
A + +L + ++++A +L+ SM PD
Sbjct: 392 NACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 125/287 (43%), Gaps = 76/287 (26%)
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
D+ N ++ YF C + GRK+FD+MP R VSW T++ G N ++D A +F+
Sbjct: 153 DVFFQNTLMDLYFKCGKP---DSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFN 209
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECD----SASLSALISGLVRNGELDM 212
MP RN VS A+IT ++ N D A F+RM D ++ L+ + G L M
Sbjct: 210 QMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSM 269
Query: 213 AA---------GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
G +L+C G LI Y + G +++AR++FD + QG
Sbjct: 270 GRWVHDYAHKNGFVLDCFLG-----------TALIDMYSKCGSLQDARKVFDVM---QG- 314
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDME 323
+++ +WNSM+ S+G C E
Sbjct: 315 ---------KSLATWNSMI----------------TSLGVHG-CG--------------E 334
Query: 324 EASKLFKEMPS-----PDALSWNSIISGFAQIGDLKVAKDFFERMPQ 365
EA LF+EM PDA+++ ++S A G++K +F RM Q
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 54/237 (22%)
Query: 47 IRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS 106
+ G+ R FD M R+ V+W T++ G V ++ A +F++MP R++VSW +I+
Sbjct: 165 FKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMIT 224
Query: 107 GYFSCCGSKFVEEGRKLFDEM------PER------------------------------ 130
Y ++ +E +LF M P
Sbjct: 225 AY---VKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNG 281
Query: 131 ---DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFK 187
DC +I Y+K G + A K+FD M ++ + N++IT ++G + A+ F+
Sbjct: 282 FVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFE 341
Query: 188 RMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQS 244
M E S A+ G+L C + K D ++ + +I YG S
Sbjct: 342 EMEEEASVEPDAIT-----------FVGVLSACANTGNVK-DGLRYFTRMIQVYGIS 386
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 45/194 (23%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
W + L+ +L A F+ M RN V+W +I+ +VK R +A QLF M D+
Sbjct: 188 WTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV 247
Query: 99 VSWNLII-------------------------SGY-------------FSCCGSKFVEEG 120
I +G+ +S CGS +++
Sbjct: 248 KPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGS--LQDA 305
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLF-----DAMPERNAVSSNAVITGFLL 175
RK+FD M + +WN++I+ +G ++AL LF +A E +A++ V++
Sbjct: 306 RKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACAN 365
Query: 176 NGDVDSAVGFFKRM 189
G+V + +F RM
Sbjct: 366 TGNVKDGLRYFTRM 379
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 150/595 (25%), Positives = 255/595 (42%), Gaps = 104/595 (17%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ GR+ AR FD M RN V+WNT++SG V+ + + F +M I + +I+
Sbjct: 4 KFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 108 YFSCCG--SKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQALKLFDAMPER 161
+ CG EG ++ + + D ++ Y G + + K+F+ MP+R
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 162 NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALIS--GLVRNGELD-MAA 214
N VS +++ G+ G+ + + +K M C+ S+S +IS GL+++ L
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 215 GILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
G +++ G E K + N+LI+ G G V+ A +FD++ R+
Sbjct: 184 GQVVK--SGLESK---LAVENSLISMLGSMGNVDYANYIFDQMS-------------ERD 225
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSM-------------------GERD---------- 305
+SWNS+ Y + G I + +F M G D
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 306 ----------TCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKV 355
C NT++ Y EA+ +FK+MP+ D +SWNS+++ F G
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG---- 341
Query: 356 AKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
++ D A+ L M G+ + T +S L+ C
Sbjct: 342 ------------------------RSLD---ALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 416 LVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA 474
G+ +H LV + + + I N+L++MY + G + E+ V +M +DV+ WNA
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNA 433
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDY 534
+IGGYA AL F+ M+ + YIT +SVL+AC G + E + ++ I
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 535 GIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVE 589
G E S + + + G L + DL N + + + W A+L + HG+ E
Sbjct: 494 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHHGHGE 547
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 220/454 (48%), Gaps = 34/454 (7%)
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECD------SA 195
Y K GR+ A LFD MP RN VS N +++G + G + FF++M CD S
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM--CDLGIKPSSF 59
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+++L++ R+G + G+ + G V ++ YG G V +R++F+
Sbjct: 60 VIASLVTACGRSGSM-FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM-GERDTCAWNTM-- 312
+P+ RNVVSW S+M+ Y G+ +++ M GE C N+M
Sbjct: 119 EMPD-------------RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL 165
Query: 313 -ISGYVQISDMEEASKLFKEMPSPDALSW----NSIISGFAQIGDLKVAKDFFERMPQKN 367
IS + D ++ ++ S NS+IS +G++ A F++M +++
Sbjct: 166 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 225
Query: 368 LISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQ 427
ISWNS+ A Y +N + + +FS M+ ++ + T+S++LSV + G+ +H
Sbjct: 226 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 428 LVTKTVIPDLP-INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAV 486
LV K + + N+L+ MY+ G EA VF +M KD+I+WN+++ + + G ++
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMASFVNDGRSL 344
Query: 487 DALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
DAL L M Y+TF S L AC E+G R + ++ G+ +
Sbjct: 345 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNAL 403
Query: 547 VDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
V + G+ G++ E+ ++ MP + D W AL+G
Sbjct: 404 VSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 162/356 (45%), Gaps = 36/356 (10%)
Query: 241 YGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDS 300
Y + G+V+ AR LFD +P RN VSWN+MM V+VG + E F
Sbjct: 2 YTKFGRVKPARHLFDIMP-------------VRNEVSWNTMMSGIVRVGLYLEGMEFF-- 46
Query: 301 MGERDTCAWNTMISGYV---QISDMEEASKLFKEMPS-----------PDALSWNSIISG 346
R C S +V ++ + +F+E D +I+
Sbjct: 47 ---RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHL 103
Query: 347 FAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
+ G + ++ FE MP +N++SW SL+ GY + + I+++ M+ EG + +++
Sbjct: 104 YGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSM 163
Query: 407 SSVLSVCTGLVDLYLGKQ-MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF 465
S V+S C L D LG+Q + Q+V + L + NSLI+M G + A +F++M
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS- 222
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR 525
+D I+WN++ YA +G ++ +F M+R T ++L+ H + G R
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG-R 281
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGS 581
+ ++ G + V + + + G+ EA + MP K D W +L+ S
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 126/564 (22%), Positives = 224/564 (39%), Gaps = 134/564 (23%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLIS-----GHVKR--REIAKARQLFDE 92
N IS L G + A FD M R+T++WN++ + GH++ R + R+ DE
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 93 MPQRDIVS------------WNLIISGY---------FSCC--------GSKFVEEGRKL 123
+ + + W I G C G+ E +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 124 FDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVIT-------- 171
F +MP +D +SWN++++ + +GR AL L +M N V+ + +
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 172 --GFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
G +L+G V + F+ ++ +AL+S + GE+ + +LL+ D
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGEMSESRRVLLQMPRRD----- 427
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPND------------------QGDGKEDGRRF 271
V A+N LI GY + ++A F + + GD E G+
Sbjct: 428 -VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 486
Query: 272 RRNVVSW---------NSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
+VS NS++ Y K GD+ S+++LF+ + R+ WN M++
Sbjct: 487 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 546
Query: 323 EEASKLFKEM----PSPDALSWNSIISGFAQIGDLK----------------------VA 356
EE KL +M S D S++ +S A++ L+ A
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 357 KDFFER----------MP---QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDR 403
D + + +P ++L SWN LI+ ++ ++ F +M G KP
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Query: 404 HTLSSVLSVCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSL--ITMYSRCGAIGEACTV 459
T S+L+ C+ GLVD G + ++ + + I + + I + R G + EA T
Sbjct: 667 VTFVSLLTACSHGGLVD--KGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 724
Query: 460 FNEMKFYKDVITWNAMIGGYASHG 483
++M + + W +++ HG
Sbjct: 725 ISKMPMKPNDLVWRSLLASCKIHG 748
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 13/272 (4%)
Query: 3 TCLMRLSRLQLPRTLCSRG--LASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFD 60
T + LS LP L RG L ++ + ES H N I+ + G LS ++ F+
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE-HVKNSLITMYAKCGDLSSSQDLFN 523
Query: 61 SMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIIS-GYFSCCGSKFVEE 119
+ +RN +TWN +++ + + +L +M + S G + +EE
Sbjct: 524 GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 583
Query: 120 GRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLL 175
G++L E D +N Y+K G + + +K+ R+ S N +I+
Sbjct: 584 GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 643
Query: 176 NGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
+G + F M E + +L++ G +D + D G +
Sbjct: 644 HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA-YYDMIARDFGLEPAI 702
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
+ +I G+SG++ EA ++P D
Sbjct: 703 EHCICVIDLLGRSGRLAEAETFISKMPMKPND 734
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 233/510 (45%), Gaps = 54/510 (10%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIV 99
N IS +R G L AR FDSM +NTVTW +I G++K +A LF++ + I
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 100 SWN--LIISGYFSCCGSKFVEEGRKLFDEMPER---DCVSWNTVISGYAKNGRMDQALKL 154
N + + C E GR++ M + + + ++++ YA+ G + AL+
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRA 240
Query: 155 FDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAA 214
FD M E++ +S AVI+ G A+G F M ++ E + +
Sbjct: 241 FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM-----------LNHWFLPNEFTVCS 289
Query: 215 GILLECGDGDEGK-----HDLVQAY---------NTLIAGYGQSGKVEEARRLFDRIPND 260
IL C + + H LV +L+ Y + G++ + R++FD + N
Sbjct: 290 -ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSN- 347
Query: 261 QGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQIS 320
RN V+W S++ + + G A LF M R A N + ++
Sbjct: 348 ------------RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Query: 321 DMEEASKLFKEMPS---PDALSWNSIISG-----FAQIGDLKVAKDFFERMPQKNLISWN 372
A L KE+ + +++ N I + + G+ + A + +++P ++++SW
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWT 455
Query: 373 SLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT 432
++I+G A++ +M EG +P+ T SS L C L +G+ +H + K
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 433 -VIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALEL 491
+ ++ + ++LI MY++CG + EA VF+ M K++++W AMI GYA +G +AL+L
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALKL 574
Query: 492 FKQMKRLKIHPTYITFISVLNACAHAGLVE 521
+M+ F ++L+ C L E
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 219/471 (46%), Gaps = 45/471 (9%)
Query: 136 NTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE---- 191
N +IS + G + A K+FD+MPE+N V+ A+I G+L G D A F+ +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 192 -CDSASLSALISGLVRNGELDMA---AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKV 247
+ L++ R E ++ G +++ G G+ + ++L+ Y Q G++
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN------LIVESSLVYFYAQCGEL 234
Query: 248 EEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC 307
A R FD + ++V+SW +++ + G + A +F M
Sbjct: 235 TSALRAFDMMEE-------------KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 308 AWNTMISGYVQISDMEEA--------SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDF 359
+ ++ E+A S + K M D S++ +A+ G++ +
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
F+ M +N ++W S+IA + + + AI LF M+ + T+ S+L C + L
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 420 YLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGG 478
LGK++H Q++ ++ ++ I ++L+ +Y +CG +A V ++ +DV++W AMI G
Sbjct: 402 LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISG 460
Query: 479 YASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEP 538
+S G +AL+ K+M + + P T+ S L ACA++ + G R +S+
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG-RSIHSIAKKNHALS 519
Query: 539 RVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL------GSCR 583
V ++ + + + G + EA + +SMP K + W A++ G CR
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMPEK-NLVSWKAMIMGYARNGFCR 569
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 48 RTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISG 107
+ G +S+ R FD M +RNTVTW ++I+ H + +A LF M +R +++ NL +
Sbjct: 331 KCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVS 390
Query: 108 YFSCCGS-KFVEEGRKLFDEM----PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERN 162
CGS + G++L ++ E++ +T++ Y K G A + +P R+
Sbjct: 391 ILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRD 450
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGILL 218
VS A+I+G G A+ F K M E + + S+ + + L + I
Sbjct: 451 VVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI-- 508
Query: 219 ECGDGDEGKHDLVQAY--NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVV 276
+ H L + + LI Y + G V EA R+FD +P +N+V
Sbjct: 509 --HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE-------------KNLV 553
Query: 277 SWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMIS--GYVQISDMEEAS 326
SW +M+M Y + G A +L M E D + T++S G +++ + E+S
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVESS 609
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/567 (24%), Positives = 255/567 (44%), Gaps = 52/567 (9%)
Query: 37 HQWNKKIS-HLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFD 91
+ + +K+S +++ +L +A F M + V +N L+S K + L +
Sbjct: 45 YDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGE 104
Query: 92 EMPQ----RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYA 143
M D+ S+N++I+ + C + + +M E D V+ +++++GY
Sbjct: 105 RMQNLRISYDLYSYNILINCF---CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 144 KNGRMDQALKLFDAM----PERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSA 195
R+ +A+ L D M + N V+ N +I G L+ AV RM + D
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ +++GL + G++D+A +L + G + + D+V Y T+I V +A LF
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKG-KIEADVV-IYTTIIDALCNYKNVNDALNLFT 279
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNT 311
+ D + R NVV++NS++ C G A L M ER + ++
Sbjct: 280 EM---------DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 312 MISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK- 366
+I +V+ + EA KL+ EM PD +++S+I+GF L AK FE M K
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 367 ---NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
N++++N+LI G+ K + + +ELF +M G + T ++++ D + +
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 424 QM-HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGY 479
++ ++V+ V PD+ + L+ + G + +A VF + K D+ T+N MI G
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPR 539
G D +LF + + P I + ++++ GL EE F M D G P
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPN 569
Query: 540 VEHFASFVDILGRQGQLQEAMDLINSM 566
+ + + R G + +LI M
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 186/432 (43%), Gaps = 63/432 (14%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I L + SEA D M R + T+ T+++G KR +I A L +M
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 95 ----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG 146
+ D+V + II + C K V + LF EM + + V++N++I G
Sbjct: 248 KGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 304
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFF----KRMPECDSASLS 198
R A +L M ER N V+ +A+I F+ G + A + KR + D + S
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+LI+G + LD A + D + V YNTLI G+ ++ +VEE LF +
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPN--VVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 259 N------------------DQGDGKEDGRRFRR--------NVVSWNSMMMCYVKVGDIV 292
GD + F++ ++++++ ++ K G +
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 293 SARELFD----SMGERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSII 344
A +F+ S E D +N MI G + +E+ LF + P+ + + ++I
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 345 SGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
SGF + G + A F M + + ++N+LI ++ D + EL +M+ G
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Query: 401 PDRHTLSSVLSV 412
D T+S V+++
Sbjct: 603 GDASTISMVINM 614
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 163/351 (46%), Gaps = 34/351 (9%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGER--------DTCAWNTMISGYVQISDMEEA 325
++V +N ++ K+ +L S+GER D ++N +I+ + + S + A
Sbjct: 79 SIVEFNKLLSAIAKMNKF----DLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLA 134
Query: 326 ----SKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERM----PQKNLISWNSLIAG 377
K+ K PD ++ +S+++G+ + A ++M Q N +++N+LI G
Sbjct: 135 LAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHG 194
Query: 378 YDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCT-GLVDLYLGKQMHQLVTKTVIP 435
+ A+ L +M G +PD T +V++ +C G +DL L + ++ +
Sbjct: 195 LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS-LLKKMEKGKIEA 253
Query: 436 DLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELF 492
D+ I ++I + +A +F EM +V+T+N++I ++G DA L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
M KI+P +TF ++++A G + E + ++ MI I+P + ++S ++
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCM 372
Query: 553 QGQLQEAMDLINSMPVK---PDKAVWGALL-GSC---RVHGNVELAQVAAQ 596
+L EA + M K P+ + L+ G C RV +EL + +Q
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 251/534 (47%), Gaps = 68/534 (12%)
Query: 38 QWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEM 93
++NK +S + + + + + M+ + T++ I+ +R +++ A + +M
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 94 P----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKN 145
+ DIV+ + +++GY C SK + + L D+M E D ++ T+I G +
Sbjct: 145 MKLGYEPDIVTLSSLLNGY---CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 146 GRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASL 197
+ +A+ L D M +R + V+ V+ G GD+D A+ +M + +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ +I L + +++A + E +G V YN+LI G+ +A RL +
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMET--KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
++ NVV++N+++ + K G +V A +L + M +R DT +N +I
Sbjct: 320 LE---------KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 314 SGYVQISDMEEASKLFKEMPSPDAL----SWNSIISGFAQIGDLKVAKDFFERMPQK--- 366
+G+ + ++EA ++FK M S D L ++N++I+GF + ++ + F M Q+
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 367 -NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVC------TGLVD 418
N +++ ++I G+ + D A +F QM D T S +L +C T LV
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 419 L-YLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIG 477
YL K +L ++ I N++I + G +GEA +F + DV+T+N MI
Sbjct: 491 FKYLQKSEMEL-------NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Query: 478 GYASHGLAVDALELFKQMKRLKIHP---TYITFISV-LNAC---AHAGLVEEGR 524
G S L +A +LF++MK P TY T I L C A A L++E R
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 140/587 (23%), Positives = 251/587 (42%), Gaps = 94/587 (16%)
Query: 58 FFDSMKHR---NTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIVSWNLIISGYFS 110
F D +K R + V +N L+S K + L ++M D+ ++++ I+ +
Sbjct: 71 FGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF-- 128
Query: 111 CCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----N 162
C + + +M E D V+ +++++GY + R+ A+ L D M E +
Sbjct: 129 -CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 163 AVSSNAVITGFLLNGDVDSAVGFFKRMPE--C--DSASLSALISGLVRNGELDMAAGILL 218
+ +I G L+ AV +M + C D + +++GL + G++D+A LL
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN-LL 246
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSW 278
+ K ++V +NT+I + VE A LF + + + R NVV++
Sbjct: 247 NKMEAARIKANVV-IFNTIIDSLCKYRHVEVAVDLFTEM---------ETKGIRPNVVTY 296
Query: 279 NSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS 334
NS++ C G A L +M E+ + +N +I + + + EA KL +EM
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 335 ----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKG 386
PD +++N +I+GF L AK F+ M K N+ ++N+LI G+ K + +
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 387 AIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITM 446
+ELF +M G LV TV ++I
Sbjct: 417 GVELFREMSQRG-----------------------------LVGNTVT-----YTTIIQG 442
Query: 447 YSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT 503
+ + G A VF +M + D++T++ ++ G S+G AL +FK +++ ++
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELN 502
Query: 504 YITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI 563
+ +++ AG V E F S+ I+P V + + + L + LQEA DL
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 564 NSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG 607
M P+ + L + N+ AA A + E SSG
Sbjct: 559 RKMKEDGTLPNSGTYNTL-----IRANLRDCDRAASAELIKEMRSSG 600
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 184/431 (42%), Gaps = 78/431 (18%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP---- 94
I L + SEA D M R + VT+ T+++G KR +I A L ++M
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI 254
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQ 150
+ ++V +N II S C + VE LF EM + + V++N++I+ GR
Sbjct: 255 KANVVIFNTIID---SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 151 ALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGF----FKRMPECDSASLSALIS 202
A +L M E+ N V+ NA+I F G + A +R + D+ + + LI+
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
G + LD A + D + +Q YNTLI G+ + +VE+ LF +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPN--IQTYNTLINGFCKCKRVEDGVELFREMSQ--- 426
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM--------------------- 301
R N V++ +++ + + GD SA+ +F M
Sbjct: 427 ------RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 302 -GERDTC-----------------AWNTMISGYVQISDMEEASKLFKEMP-SPDALSWNS 342
G+ DT +NTMI G + + EA LF + PD +++N+
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNT 540
Query: 343 IISGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
+ISG L+ A D F +M + + ++N+LI ++ D + EL +M+ G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 399 EKPDRHTLSSV 409
D T+S V
Sbjct: 601 FVGDASTISLV 611
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 193/455 (42%), Gaps = 94/455 (20%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEAS 326
+ ++V+ +S++ Y I A L D M E DT + T+I G + EA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 327 KLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGY 378
L +M PD +++ ++++G + GD+ +A + +M + N++ +N++I
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCT----------------------- 414
K + A++LF++M+ +G +P+ T +S+++ +C
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 415 ----GLVDLYL-------GKQMHQ-LVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNE 462
L+D + +++H+ ++ +++ PD N LI + + EA +F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 463 MKFYKDVI----TWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAG 518
M KD + T+N +I G+ D +ELF++M + + +T+ +++ AG
Sbjct: 389 M-VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 519 LVEEGRRQFNSMIND------------------YG----------------IEPRVEHFA 544
+ + F M+++ YG +E + +
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 545 SFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALL-GSCRVHGNVELAQVAAQALISLEP 603
+ ++ + + G++ EA DL S+ +KPD + ++ G C + L Q A ++
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC----SKRLLQEADDLFRKMKE 563
Query: 604 ESSGPYVLLYN--MYANLELWDDAERVRVLMEEKN 636
+ + P YN + ANL D A ++ E ++
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 151/629 (24%), Positives = 272/629 (43%), Gaps = 84/629 (13%)
Query: 37 HQWNKKISHLIRTGRLSEARTFFDSMKHRNTV----TWNTLISGHVKRREIAKARQLFDE 92
+ ++ I + + G + +A+ FD M + + +LI G+ + + + + +L E
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 93 MPQRDIV----SWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAK 144
M +R+IV ++ ++ G C S ++ + EM C V + T+I + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGM---CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 145 NGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSAS 196
N R A+++ M E+ + N++I G +D A F M E ++ +
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 197 LSALISGLVRNGEL---DMAAGILLECGDGDEGKHDLVQAYNTLIAG----YGQSGKVEE 249
A ISG + E D + ECG V L G Y + GKV E
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECG---------VLPNKVLCTGLINEYCKKGKVIE 575
Query: 250 ARRLFDRIPNDQG---DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-- 304
A + R DQG D K ++ +M K + A E+F M +
Sbjct: 576 ACSAY-RSMVDQGILGDAK-----------TYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 305 --DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKD 358
D ++ +I+G+ ++ +M++AS +F EM +P+ + +N ++ GF + G+++ AK+
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 359 FFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
+ M K N +++ ++I GY K+ D A LF +M+L+G PD ++++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 415 GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM------KFYK- 467
L D+ + K N+LI + G V N + +F K
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
+ +T+N MI G A ELF QM+ + PT IT+ S+LN G E F
Sbjct: 804 NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVF 863
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM--------PVKPDKAVWGALL 579
+ I GIEP ++ ++ ++G +A+ L++ M K + ALL
Sbjct: 864 DEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 580 GSCRVHGNVELAQVAAQALISLE--PESS 606
G +E+A+ + ++ L+ P+S+
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 134/611 (21%), Positives = 240/611 (39%), Gaps = 119/611 (19%)
Query: 11 LQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTV-- 68
L+L ++ +GL L + ++ I L + RL +A++ M
Sbjct: 262 LKLKESMICKGLVP----------LKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 69 --TWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGY-FSCCGSKFVEEG----- 120
T++ LI G +K R A+ L EM VS + I Y + CC +EG
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEM-----VSHGINIKPYMYDCCICVMSKEGVMEKA 366
Query: 121 RKLFDEMPERDCV----SWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN 176
+ LFD M + ++ ++I GY + + Q +L M +RN V S
Sbjct: 367 KALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS---------- 416
Query: 177 GDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNT 236
+ ++ G+ +G+LD A I+ E G V Y T
Sbjct: 417 -----------------PYTYGTVVKGMCSSGDLDGAYNIVKEMIAS--GCRPNVVIYTT 457
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
LI + Q+ + +A R+ + KE G ++ +NS+++ K + AR
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEM-------KEQG--IAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 297 LFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFA 348
M E + + ISGY++ S+ A K KEM P+ + +I+ +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 349 QIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRH 404
+ G + A + M + ++ ++ L+ G KN+ A E+F +M+ +G
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG------ 622
Query: 405 TLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM- 463
+ PD+ LI +S+ G + +A ++F+EM
Sbjct: 623 ----------------------------IAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 464 --KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
+VI +N ++GG+ G A EL +M +HP +T+ ++++ +G +
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 522 EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI--NSMPVKPDKAVWGALL 579
E R F+ M G+ P + + VD R ++ A+ + N A + AL+
Sbjct: 715 EAFRLFDEM-KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 580 GSCRVHGNVEL 590
G EL
Sbjct: 774 NWVFKFGKTEL 784
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 256/563 (45%), Gaps = 69/563 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I G + A T FD M+ + N VT+NTLI G+ K R+I +L M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG 146
+ +++S+N++I+G C ++E + EM R D V++NT+I GY K G
Sbjct: 268 LKGLEPNLISYNVVINGL---CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE---C-DSASLS 198
QAL + M + ++ ++I G+++ A+ F +M C + + +
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
L+ G + G ++ A +L E D G V YN LI G+ +GK+E+A + +
Sbjct: 385 TLVDGFSQKGYMNEAYRVLREMNDN--GFSPSVVTYNALINGHCVTGKMEDAIAVLE--- 439
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA----RELFDSMGERDTCAWNTMIS 314
D KE G +VVS+++++ + + D+ A RE+ + + DT ++++I
Sbjct: 440 ----DMKEKG--LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 315 GYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK---- 366
G+ + +EA L++EM PD ++ ++I+ + GDL+ A M +K
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
++++++ LI G +K + A L ++ E P T +++ C+
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS------------ 601
Query: 427 QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM--KFYK-DVITWNAMIGGYASHG 483
+ K+V+ SLI + G + EA VF M K +K D +N MI G+ G
Sbjct: 602 NIEFKSVV-------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 484 LAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHF 543
A L+K+M + +T I+++ A G V E ++ + E
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELS-EAEQA 713
Query: 544 ASFVDILGRQGQLQEAMDLINSM 566
V+I R+G + +D++ M
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEM 736
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 167/337 (49%), Gaps = 20/337 (5%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLF 329
NV ++N ++ + G+I A LFD M + + +NT+I GY ++ +++ KL
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 330 KEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----ISWNSLIAGYDKN 381
+ M P+ +S+N +I+G + G +K M ++ +++N+LI GY K
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 382 EDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVCTGLVDLYLGKQMHQLVTKTVIPDLPIN 440
++ A+ + ++M G P T +S++ S+C + + Q+ + + P+
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 441 NSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
+L+ +S+ G + EA V EM F V+T+NA+I G+ G DA+ + + MK
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
+ P +++ +VL+ + V+E R M+ + GI+P ++S + Q + +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 558 EAMDLINSM---PVKPDKAVWGALLGSCRVHGNVELA 591
EA DL M + PD+ + AL+ + + G++E A
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 225/494 (45%), Gaps = 53/494 (10%)
Query: 135 WNTVISGYAKNGRMDQALKLFDA------MPERNAVSSNAVITGFLLNG-DVDSAVGFFK 187
++ V+ Y++ +D+AL + MP +S NAV+ + + ++ A FK
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMP--GVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 188 RMPECDSA----SLSALISGLVRNGELDMAAGILLECGDGDEGKHDL--VQAYNTLIAGY 241
M E + + + LI G G +D+A + D E K L V YNTLI GY
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF----DKMETKGCLPNVVTYNTLIDGY 250
Query: 242 GQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
+ K+++ +L + + N++S+N ++ + G + + M
Sbjct: 251 CKLRKIDDGFKLLRSMA---------LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 302 GER----DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDL 353
R D +NT+I GY + + +A + EM +P +++ S+I + G++
Sbjct: 302 NRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM 361
Query: 354 KVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
A +F ++M + L ++ +L+ G+ + A + +M G P T +++
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 410 LS--VCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---K 464
++ TG ++ + + + K + PD+ +++++ + R + EA V EM
Sbjct: 422 INGHCVTGKMEDAIA-VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 465 FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGR 524
D IT++++I G+ +A +L+++M R+ + P T+ +++NA G +E+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 525 RQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK---PDKAVWGALLGS 581
+ N M+ + G+ P V ++ ++ L +Q + +EA L+ + + P + L+ +
Sbjct: 541 QLHNEMV-EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 582 CRVHGNVELAQVAA 595
C N+E V +
Sbjct: 600 C---SNIEFKSVVS 610
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 243/530 (45%), Gaps = 57/530 (10%)
Query: 38 QWNKKISHLIRTGRLSEARTFFDSMKHRNTV----TWNTLISGHVKRREIAKARQLFDEM 93
++NK +S + + + + + M+ V T+N LI+ +R +I+ A L +M
Sbjct: 87 EFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM 146
Query: 94 P----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKN 145
+ IV+ + +++GY C K + + L D+M E D +++ T+I G +
Sbjct: 147 MKLGYEPSIVTLSSLLNGY---CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 146 GRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASL 197
+ +A+ L D M +R N V+ V+ G GD D A+ +M E D
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ +I L + +D A + E +G V Y++LI+ G+ +A +L +
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMET--KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
++ N+V++N+++ +VK G V A +L+D M +R D +N+++
Sbjct: 322 IE---------KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 314 SGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI 369
+G+ +++A ++F+ M S PD +++N++I GF + ++ + F M + L+
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 370 ----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM 425
++ +LI G + D A ++F QM +G PD T S +L L ++
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 492
Query: 426 HQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFY---KDVITWNAMIGGYAS 481
+ K+ I D+ I ++I + G + + +F + +V+T+N MI G S
Sbjct: 493 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 552
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNA-------CAHAGLVEEGR 524
L +A L K+MK P T+ +++ A A A L+ E R
Sbjct: 553 KRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 172/351 (49%), Gaps = 41/351 (11%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ IS L GR S+A M + N VT+N LI VK + +A +L+D+M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNG 146
+R DI ++N +++G+ C +++ +++F+ M +DC V++NT+I G+ K+
Sbjct: 358 KRSIDPDIFTYNSLVNGF---CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM-----PECDSASL 197
R++ +LF M R + V+ +I G +GD D+A FK+M P D +
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTY 473
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
S L+ GL NG+L+ A + + E K D + Y T+I G ++GKV++ LF +
Sbjct: 474 SILLDGLCNNGKLEKALEV-FDYMQKSEIKLD-IYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
+ + NVV++N+M+ + A L M E ++ +NT+I
Sbjct: 532 SL---------KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 314 SGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQ-IGDLKVAKDFFERM 363
+++ D +++L +EM S + S I A + D ++ K F + +
Sbjct: 583 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 218/517 (42%), Gaps = 83/517 (16%)
Query: 128 PERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV----SSNAVITGFLLNGDVDSAV 183
P V +N ++S AK + D + L + M V + N +I F + A+
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 184 GFFKRMP----ECDSASLSALISGLVRNGELDMAAGI---LLECGDGDEGKHDLVQAYNT 236
+M E +LS+L++G + A + ++E G + D + + T
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG----YRPDTI-TFTT 195
Query: 237 LIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARE 296
LI G K EA L DR+ R + N+V++ ++ K GD A
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQ---------RGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 297 LFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFA 348
L + M E D +NT+I + +++A LFKEM + P+ ++++S+IS
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 349 QIG----DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRH 404
G ++ D E+ NL+++N+LI + K + A +L+ M
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM---------- 356
Query: 405 TLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM- 463
+ +++ PD+ NSL+ + + +A +F M
Sbjct: 357 ------------------------IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 464 --KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVE 521
+ DV+T+N +I G+ D ELF++M + +T+ +++ H G +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 522 EGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM---PVKPDKAVWGAL 578
++ F M++D G+ P + ++ +D L G+L++A+++ + M +K D ++ +
Sbjct: 453 NAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 579 L-GSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
+ G C+ G V+ SL + P V+ YN
Sbjct: 512 IEGMCKA-GKVD---DGWDLFCSLSLKGVKPNVVTYN 544
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 158/654 (24%), Positives = 286/654 (43%), Gaps = 83/654 (12%)
Query: 15 RTLC-------SRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNT 67
R+LC ++ F + D+ SSL N ++ L+R+ A +F+ M +T
Sbjct: 44 RSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDT 103
Query: 68 ----VTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEE 119
V+ + L+ +V+ R+ A + M +R ++ + N+++ G C + +
Sbjct: 104 FINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGL---CRNLECGK 160
Query: 120 GRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNA----VSSNAVIT 171
L EM D S+NTVI G+ + +++AL+L + M V+ +I
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 172 GFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGK 227
F G +D A+GF K M E D ++LI G GELD + E + G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV--LERGD 278
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRI------PN------------DQGDGKEDGR 269
YNTLI G+ + G+++EA +F+ + PN G KE +
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 270 RF--------RRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYV 317
N V++N ++ K G + A E+ + M +R D +N ++ G
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 318 QISDMEEASKLFKEM------PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----N 367
D++EASKL M PD +S+N++I G + L A D ++ + +K +
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 368 LISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VC-TGLVDLYLGKQM 425
++ N L+ K D A+EL+ Q+ + T ++++ C TG++++ G +
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG-LL 517
Query: 426 HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF---YKDVITWNAMIGGYASH 482
++ + P + N L++ + G++ +A +F EM+ + DV+++N MI G
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
G A L M R + P T+ ++N G ++E F+ M+ D G EP
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV-DSGFEPDAHI 636
Query: 543 FASFVDILGRQGQLQEAMDLINSMPVKP---DKAVWGALLG-SCRVHGNVELAQ 592
S + QG+ + +L+ + K DK + ++ C N++LA+
Sbjct: 637 CDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK 690
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/565 (23%), Positives = 248/565 (43%), Gaps = 86/565 (15%)
Query: 38 QWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFDEM 93
+++K +S + + + + + M++ N T++ LI+ +R +++ A + +M
Sbjct: 83 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 94 P----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKN 145
+ DIV+ N +++G+ C G++ + + L +M E D ++NT+I G ++
Sbjct: 143 MKLGYEPDIVTLNSLLNGF--CHGNR-ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 146 GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLV 205
R +A+ L D M V+ G + D + +++GL
Sbjct: 200 NRASEAVALVDRM----------VVKG-----------------CQPDLVTYGIVVNGLC 232
Query: 206 RNGELDMAAGIL--LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
+ G++D+A +L +E G + G V YNT+I V +A LF +
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPG----VVIYNTIIDALCNYKNVNDALNLFTEM------ 282
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQI 319
D + R NVV++NS++ C G A L M ER + ++ +I +V+
Sbjct: 283 ---DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 320 SDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISW 371
+ EA KL+ EM PD +++S+I+GF L AK FE M K N++++
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ------- 424
N+LI G+ K + +ELF +M G + + ++ T + + ++
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRG------LVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 425 MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYAS 481
Q+V+ V+PD+ + L+ G + A VF + K D+ T+N MI G
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 482 HGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVE 541
G D +LF + + P +T+ ++++ GL EE F M + G P
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM-KEEGPLPDSG 572
Query: 542 HFASFVDILGRQGQLQEAMDLINSM 566
+ + + R G + +LI M
Sbjct: 573 TYNTLIRAHLRDGDKAASAELIREM 597
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 162/320 (50%), Gaps = 38/320 (11%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I L GR S+A M R N VT++ LI VK ++ +A +L+DEM
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNG 146
+R DI +++ +I+G+ C ++E + +F+ M +DC V++NT+I G+ K
Sbjct: 354 KRSIDPDIFTYSSLINGF---CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLS 198
R+D+ ++LF M +R N V+ +I GF + D+A FK+M D + S
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
L+ GL NG+++ A ++ E + + D + YN +I G ++GKVE+ LF +
Sbjct: 471 ILLDGLCNNGKVETAL-VVFEYLQRSKMEPD-IYTYNIMIEGMCKAGKVEDGWDLFCSL- 527
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMIS 314
+ + NVV++ +MM + + G A LF M E D+ +NT+I
Sbjct: 528 --------SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 315 GYVQISDMEEASKLFKEMPS 334
+++ D +++L +EM S
Sbjct: 580 AHLRDGDKAASAELIREMRS 599
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 218/498 (43%), Gaps = 61/498 (12%)
Query: 4 CLMRLSRLQLPRTLCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSM- 62
C R S+L L + ++ + ++ + + N ++ R+S+A + M
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPD------IVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 63 ---KHRNTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIVSWNLIISGYFSCCGSK 115
++ T+NTLI G + ++A L D M Q D+V++ ++++G C
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL---CKRG 235
Query: 116 FVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSN 167
++ L +M E V +NT+I ++ AL LF M + N V+ N
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 168 AVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDMAAGILLE---- 219
++I G A M E + + SALI V+ G+L A + E
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 220 CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
D D + Y++LI G+ +++EA+ +F+ + + + NVV++N
Sbjct: 356 SIDPD------IFTYSSLINGFCMHDRLDEAKHMFELMIS---------KDCFPNVVTYN 400
Query: 280 SMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS- 334
+++ + K + ELF M +R +T + T+I G+ Q + + A +FK+M S
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 335 ---PDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYKGA 387
PD ++++ ++ G G ++ A FE + + ++ ++N +I G K +
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 388 IELFSQMQLEGEKPDRHTLSSVLS-VCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITM 446
+LF + L+G KP+ T ++++S C + ++ + +PD N+LI
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 447 YSRCGAIGEACTVFNEMK 464
+ R G + + EM+
Sbjct: 581 HLRDGDKAASAELIREMR 598
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 158/329 (48%), Gaps = 27/329 (8%)
Query: 291 IVSARELFDSMG-ERDTCAWNTMISGYVQISDMEEA----SKLFKEMPSPDALSWNSIIS 345
++S E ++G + ++ +I+ + + S + A +K+ K PD ++ NS+++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 346 GFA---QIGD-LKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
GF +I D + + E Q + ++N+LI G ++ A+ L +M ++G +P
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
Query: 402 DRHTLSSVLS-VCT-GLVDLYLG--KQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
D T V++ +C G +DL L K+M Q + P + I N++I + +A
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQ---GKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 458 TVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
+F EM +V+T+N++I ++G DA L M KI+P +TF ++++A
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK---PD 571
G + E + ++ MI I+P + ++S ++ +L EA + M K P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 572 KAVWGALL-GSC---RVHGNVELAQVAAQ 596
+ L+ G C RV +EL + +Q
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 242/532 (45%), Gaps = 57/532 (10%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFD 91
+ ++NK +S + + + + + M+ N T+N LI+ +R +I+ A L
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYA 143
+M + IV+ + +++GY C K + + L D+M E D +++ T+I G
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGY---CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 144 KNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSA 195
+ + +A+ L D M +R N V+ V+ G GD+D A +M E D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ +I L + +D A + E +G V Y++LI+ G+ +A +L
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMET--KGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNT 311
+ ++ N+V++N+++ +VK G V A +L D M +R D +N+
Sbjct: 245 DMIE---------KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 312 MISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKN 367
+I+G+ +++A ++F+ M S PD ++N++I GF + ++ + F M +
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 368 LI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
L+ ++ +LI G + D A ++F QM +G PD T S +L L
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 424 QMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVFNEMKFY---KDVITWNAMIGGY 479
++ + K+ I D+ I ++I + G + + +F + +V+T+N MI G
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 480 ASHGLAVDALELFKQMKRLKIHPTYITFISVLNA-------CAHAGLVEEGR 524
S L +A L K+MK P T+ +++ A A A L+ E R
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 170/351 (48%), Gaps = 41/351 (11%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ IS L GR S+A M + N VT+N LI VK + +A +L D+M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----SWNTVISGYAKNG 146
+R DI ++N +I+G+ C +++ +++F+ M +DC ++NT+I G+ K+
Sbjct: 283 KRSIDPDIFTYNSLINGF---CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM-----PECDSASL 197
R++ +LF M R + V+ +I G +GD D+A FK+M P D +
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP-DIMTY 398
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
S L+ GL NG+L+ A + + E K D + Y T+I G ++GKV++ LF +
Sbjct: 399 SILLDGLCNNGKLEKALEV-FDYMQKSEIKLD-IYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
+ + NVV++N+M+ + A L M E D+ +NT+I
Sbjct: 457 S---------LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 314 SGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQ-IGDLKVAKDFFERM 363
+++ D +++L +EM S + S I A + D ++ K F + +
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 558
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 177/392 (45%), Gaps = 36/392 (9%)
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL 328
N+ ++N ++ C+ + I A L M E +++++GY + +A L
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 329 FKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDK 380
+M PD +++ ++I G A +RM Q+ NL+++ ++ G K
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVCT-GLVD--LYLGKQMHQLVTKTVIPD 436
D A L ++M+ + D ++++ S+C VD L L K+M TK + P+
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME---TKGIRPN 219
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFK 493
+ +SLI+ G +A + ++M K +++T+NA+I + G V+A +L
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 494 QMKRLKIHPTYITFISVLNA-CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
M + I P T+ S++N C H L ++ ++ F M++ P ++ + + + +
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRL-DKAKQMFEFMVSK-DCFPDLDTYNTLIKGFCK 337
Query: 553 QGQLQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALIS--LEPESSG 607
++++ +L M + D + L+ G+ + AQ + ++S + P+
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 608 PYVLLYNMYAN------LELWDDAERVRVLME 633
+LL + N LE++D ++ + ++
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 127/564 (22%), Positives = 247/564 (43%), Gaps = 84/564 (14%)
Query: 38 QWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEM 93
++NK +S + + + + + M+ + T++ I+ +R +++ A + +M
Sbjct: 85 EFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 94 P----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKN 145
+ DIV+ + +++GY C SK + + L D+M E D ++ T+I G +
Sbjct: 145 MKLGYEPDIVTLSSLLNGY---CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 146 GRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASL 197
+ +A+ L D M +R + V+ V+ G GD+D A+ K+M E D
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ +I GL + +D A + E + +G V Y++LI+ G+ +A RL +
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDN--KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
R+ NVV++++++ +VK G +V A +L+D M +R D ++++I
Sbjct: 320 IE---------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 314 SGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK--- 366
+G+ ++EA +F+ M S P+ ++++++I GF + ++ + F M Q+
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 367 -NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM 425
N +++ +LI G+ + D A +F QM
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQM------------------------------- 459
Query: 426 HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASH 482
V+ V P++ N L+ + G + +A VF ++ D+ T+N MI G
Sbjct: 460 ---VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
G D ELF + + P I + ++++ G EE M D G P
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED-GPLPNSGT 575
Query: 543 FASFVDILGRQGQLQEAMDLINSM 566
+ + + R G + + +LI M
Sbjct: 576 YNTLIRARLRDGDREASAELIKEM 599
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 161/320 (50%), Gaps = 38/320 (11%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ IS L GR S+A M R N VT++ LI VK ++ +A +L+DEM
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNG 146
+R DI +++ +I+G+ C ++E + +F+ M +DC V+++T+I G+ K
Sbjct: 356 KRSIDPDIFTYSSLINGF---CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLS 198
R+++ ++LF M +R N V+ +I GF D D+A FK+M + + +
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
L+ GL +NG+L A ++ E + D + YN +I G ++GKVE+ LF +
Sbjct: 473 ILLDGLCKNGKL-AKAMVVFEYLQRSTMEPD-IYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMIS 314
+ NV+++N+M+ + + G A L M E ++ +NT+I
Sbjct: 531 L---------KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 315 GYVQISDMEEASKLFKEMPS 334
++ D E +++L KEM S
Sbjct: 582 ARLRDGDREASAELIKEMRS 601
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 160/363 (44%), Gaps = 56/363 (15%)
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEAS 326
+ ++V+ +S++ Y I A L D M E DT + T+I G + EA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 327 KLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGY 378
L +M PD +++ ++++G + GD+ +A ++M + +++ +N++I G
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP 438
K + A+ LF++M +G +PD T SS++S
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC-------------------------- 302
Query: 439 INNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRL 498
+ Y R + E K +V+T++A+I + G V+A +L+ +M +
Sbjct: 303 -----LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 499 KIHPTYITFISVLNA-CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
I P T+ S++N C H L +E + F MI+ P V +++ + + +++
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYSTLIKGFCKAKRVE 415
Query: 558 EAMDLINSMPVKPDKAVWGALLGSCRVHG-----NVELAQVAAQALISLEPESSGPYVLL 612
E M+L M + V + + +HG + + AQ+ + ++S+ P +L
Sbjct: 416 EGMELFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV---GVHPNILT 470
Query: 613 YNM 615
YN+
Sbjct: 471 YNI 473
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 134/577 (23%), Positives = 252/577 (43%), Gaps = 71/577 (12%)
Query: 43 ISHLIRTGRLSEARTFF----DSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
+ HL++T + F +S + + I VK ++ K +LF+ M I
Sbjct: 151 LDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRI 210
Query: 99 VS----WNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQ 150
+N++I G C K + + +LFDEM R +++NT+I GY K G ++
Sbjct: 211 YPSVFIYNVLIDGL---CKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 151 ALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALIS 202
+ K+ + M E + ++ N ++ G G V+ A K M + D+ + S L
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
G N + + A G+ D G + L+ + GK+E+A +
Sbjct: 328 GYSSNEKAEAALGVYETAVDS--GVKMNAYTCSILLNALCKEGKIEKAEEIL-------- 377
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDM 322
G+E + N V +N+M+ Y + GD+V AR ++I M
Sbjct: 378 -GREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR---------------------MKIEAM 415
Query: 323 EEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGY 378
E K+ PD L++N +I F ++G+++ A+ +M K ++ ++N LI GY
Sbjct: 416 E------KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCTGLVDLYLGKQMHQLVTKTVIPDL 437
+ ++ ++ +M+ G P+ + ++++ +C G L + + V P +
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 438 PINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
I N LI G I +A EM +++T+N +I G + G +A +L +
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
+ R + P T+ S+++ AG V+ + M GI+P ++ + + + ++G
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS-GIKPTLKTYHLLISLCTKEG 648
Query: 555 QLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELA 591
++ L M +KPD V+ +L VHG++E A
Sbjct: 649 -IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKA 684
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 135/597 (22%), Positives = 248/597 (41%), Gaps = 120/597 (20%)
Query: 20 RGLASFHK-TNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLI 74
+GL F++ +D + +N I L + R+++A FD M R + +T+NTLI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 75 SGHVKRREIAKARQLFDEMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPE- 129
G+ K K+ ++ + M + ++++N ++ G F + VE+ + EM +
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK---AGMVEDAENVLKEMKDL 313
Query: 130 ---RDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN-----GDVDS 181
D +++ + GY+ N + + AL +++ + + V NA LLN G ++
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD-SGVKMNAYTCSILLNALCKEGKIEK 372
Query: 182 AVGFFKR------MPECDSASLSALISGLVRNGEL------------------DMAAGIL 217
A R +P + + +I G R G+L +A L
Sbjct: 373 AEEILGREMAKGLVP--NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCL 430
Query: 218 L----ECGDGDEGKHDL-----------VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
+ E G+ + + ++ V+ YN LI GYG+ E + FD + +
Sbjct: 431 IRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRK---YEFDKCFDILKEMED 487
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCA----WNTMISGYVQ 318
+G NVVS+ +++ C K ++ A+ + M +R +N +I G
Sbjct: 488 NGT------MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 319 ISDMEEASKLFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----IS 370
+E+A + KEM + +++N++I G + G L A+D + +K L +
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT 430
+NSLI+GY + + I L+ +M+ G KP T ++S+CT K+ +L
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT--------KEGIELTE 653
Query: 431 KTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALE 490
+ +F EM D++ +N ++ YA HG A
Sbjct: 654 R---------------------------LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 491 LFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFV 547
L KQM I T+ S++ G + E R + M N +EP + + V
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM-NAREMEPEADTYNIIV 742
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 183/409 (44%), Gaps = 59/409 (14%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I R G L AR ++M+ + + + +N LI + E+ A + ++M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERD-------CVSWNTVISGYA 143
+ + ++N++I GY G K+ E K FD + E + VS+ T+I+
Sbjct: 452 LKGVSPSVETYNILIGGY----GRKY--EFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 144 KNGRMDQALKLFDAMPERNAVSS----NAVITGFLLNGDVDSAVGFFKRM----PECDSA 195
K ++ +A + M +R N +I G G ++ A F K M E +
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ + LI GL G+L A +LLE +G V YN+LI+GYG +G V+ L++
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISR--KGLKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER-DTCAWNTMIS 314
+ K G + + +++ ++ K G ++ R LF M + D +N ++
Sbjct: 624 EM-------KRSG--IKPTLKTYHLLISLCTKEGIELTER-LFGEMSLKPDLLVYNGVLH 673
Query: 315 GYVQISDMEEASKLFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI- 369
Y DME+A L K+M D ++NS+I G ++G L + + M + +
Sbjct: 674 CYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEP 733
Query: 370 ---SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTG 415
++N ++ G+ + +DY A + +MQ +G +L VC G
Sbjct: 734 EADTYNIIVKGHCEVKDYMSAYVWYREMQEKG---------FLLDVCIG 773
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 6/224 (2%)
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNS 442
YK AIEL + G PDR + C L L K++H + D +NN
Sbjct: 221 YKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
+I+M+ C +I +A VF+ M KD+ +W+ M+ Y+ +G+ DAL LF++M + + P
Sbjct: 277 VISMFGECSSITDAKRVFDHM-VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
TF++V ACA G +EE F+SM N++GI P+ EH+ + +LG+ G L EA
Sbjct: 336 NEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQY 395
Query: 563 INSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESS 606
I +P +P W A+ R+HG+++L + ++ ++P +
Sbjct: 396 IRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
N +IS F + + AK F+ M K++ SW+ ++ Y N A+ LF +M G K
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 401 PDRHTLSSVLSVCT---GLVDLYLG----KQMHQLVTKTVIPDLPINNSLITMYSRCGAI 453
P+ T +V C G+ + +L K H + KT ++ + +CG +
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTE-----HYLGVLGVLGKCGHL 389
Query: 454 GEACTVFNEMKFYKDVITWNAMIGGYASHG 483
EA ++ F W AM HG
Sbjct: 390 VEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 245/561 (43%), Gaps = 90/561 (16%)
Query: 26 HKTNDNESSLLH--QWNKKISHLIRTGRLSEARTFFDSMKHRNTVT----WNTLISGHVK 79
H ++ N S L + N + ++RTG L E F ++M + V TLI G +
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 80 RREIAKARQLFDEMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVI 139
+ KA ++ + + GS V D +++N +I
Sbjct: 150 LGKTRKAAKILEILE------------------GSGAVP------------DVITYNVMI 179
Query: 140 SGYAKNGRMDQALKLFDAMP-ERNAVSSNAVITGFLLNGDVDSAVGFFKRM--PEC--DS 194
SGY K G ++ AL + D M + V+ N ++ +G + A+ RM +C D
Sbjct: 180 SGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
+ + LI R+ + A +L E D G V YN L+ G + G+++EA +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRD--RGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
+ +P+ + NV++ N ++ G + A +L M
Sbjct: 298 NDMPSSG---------CQPNVITHNIILRSMCSTGRWMDAEKLLADM------------- 335
Query: 315 GYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLIS 370
++ SP +++N +I+ + G L A D E+MPQ N +S
Sbjct: 336 --------------LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCT-GLVDLYLGKQMHQL 428
+N L+ G+ K + AIE +M G PD T +++L+ +C G V+ + + ++QL
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV-EILNQL 440
Query: 429 VTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLA 485
+K P L N++I ++ G G+A + +EM+ D IT+++++GG + G
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
+A++ F + +R+ I P +TF S++ + + MIN G +P +
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN-RGCKPNETSYTI 559
Query: 546 FVDILGRQGQLQEAMDLINSM 566
++ L +G +EA++L+N +
Sbjct: 560 LIEGLAYEGMAKEALELLNEL 580
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 199/450 (44%), Gaps = 51/450 (11%)
Query: 164 VSSNAVITGFLLNGDVDSAVGFFKRM------PECDSASLSALISGLVRNGELDMAAGIL 217
V SN + + G+++ F + M P D + LI G R G+ AA IL
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVP--DIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 218 LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVS 277
E +G D++ YN +I+GY ++G++ A + DR+ +VV+
Sbjct: 161 -EILEGSGAVPDVI-TYNVMISGYCKAGEINNALSVLDRMS------------VSPDVVT 206
Query: 278 WNSMMMCYVKVGDIVSARELFDSMGERD----TCAWNTMISGYVQISDMEEASKLFKEMP 333
+N+++ G + A E+ D M +RD + +I + S + A KL EM
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 334 ----SPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYK 385
+PD +++N +++G + G L A F MP Q N+I+ N ++ +
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 386 GAIELFSQMQLEGEKPDRHTLSSVLS-VC-TGLVDLYLGKQ---MHQLVTKTVIPDLPIN 440
A +L + M +G P T + +++ +C GL LG+ + ++ P+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGL----LGRAIDILEKMPQHGCQPNSLSY 382
Query: 441 NSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
N L+ + + + A M Y D++T+N M+ G DA+E+ Q+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
P IT+ +V++ A AG + + + M ++P ++S V L R+G++
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 558 EAMDLINS---MPVKPDKAVWGA-LLGSCR 583
EA+ + M ++P+ + + +LG C+
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/589 (22%), Positives = 262/589 (44%), Gaps = 70/589 (11%)
Query: 67 TVTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNLIISGYFSCCGSKFVEEGRK 122
T T+N LI + AR+LFDEMP++ ++ +++ GY C + ++G +
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY---CKAGLTDKGLE 203
Query: 123 LFDEM------PERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITG 172
L + M P + V +NT++S + + GR D + K+ + M E + V+ N+ I+
Sbjct: 204 LLNAMESFGVLPNK--VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 173 FLLNGDVDSAVGFFKRM--------PECDSASLSALISGLVRNGELDMAAGILLECGDGD 224
G V A F M P +S + + ++ G + G L+ A + + D
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 225 EGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMC 284
+ +Q+YN + G + GK EA + ++ D+G G ++ S+N +M
Sbjct: 322 DLAS--LQSYNIWLQGLVRHGKFIEAETVLKQM-TDKGIGP--------SIYSYNILMDG 370
Query: 285 YVKVGDIVSARELFDSMGERDTC----AWNTMISGYVQISDMEEASKLFKEMPS----PD 336
K+G + A+ + M C + ++ GY + ++ A L +EM P+
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 337 ALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFS 392
A + N ++ ++G + A++ +M +K + ++ N ++ G + + AIE+
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 393 QMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGA 452
M++ G L ++ + GLVD L+ +PDL ++L+ + G
Sbjct: 491 GMRVHGSA----ALGNLGNSYIGLVD-------DSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 453 IGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
EA +F EM K D + +N I + G A + K M++ H + T+ S
Sbjct: 540 FAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM--- 566
++ + E + M + GI P + + + + L ++++A +L++ M
Sbjct: 600 LILGLGIKNQIFEIHGLMDEM-KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 567 PVKPDKAVWGALLGS-CRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
+ P+ + L+ + C+V + ++AQ + +S+ + G Y L++N
Sbjct: 659 NIAPNVFSFKYLIEAFCKVP-DFDMAQEVFETAVSICGQKEGLYSLMFN 706
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 188/463 (40%), Gaps = 109/463 (23%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMK--------HRNTVTWNTLISGHVKRREIAKARQLF 90
+N +IS L + G++ +A F M+ N++T+N ++ G K + A+ LF
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLF 314
Query: 91 DEMPQRD---------------------------------------IVSWNLIISGYFSC 111
+ + + D I S+N+++ G
Sbjct: 315 ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL--- 371
Query: 112 CGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSN 167
C + + + + M D V++ ++ GY G++D A L M RN N
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLPN 430
Query: 168 AVITGFLLN-----GDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDMAAGI-- 216
A LL+ G + A ++M E D+ + + ++ GL +GELD A I
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 217 ---------LLECGDGDEGKHD--LVQ--------AYNTLIAGYGQSGKVEEARRLFDRI 257
L G+ G D L++ Y+TL+ G ++G+ EA+ LF +
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC-----AWNTM 312
G + + + V++N + + K G I SA + M E+ C +N++
Sbjct: 551 M---------GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSL 600
Query: 313 ISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
I G + + E L EM SP+ ++N+ I + ++ A + + M QKN+
Sbjct: 601 ILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNI 660
Query: 369 ----ISWNSLIAGYDKNEDYKGAIELF-SQMQLEGEKPDRHTL 406
S+ LI + K D+ A E+F + + + G+K ++L
Sbjct: 661 APNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL 703
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 24/238 (10%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I H + G++S A M+ H++ T+N+LI G + +I + L DEM
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMK 621
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----SWNTVISGYAKNG 146
++ +I ++N I + C G K VE+ L DEM +++ S+ +I + K
Sbjct: 622 EKGISPNICTYNTAIQ--YLCEGEK-VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVP 678
Query: 147 RMDQALKLFDAM----PERNAVSS---NAVITGFLLNGDVDSAVGFFKRMPECDSASLSA 199
D A ++F+ ++ + S N ++ L + R E +
Sbjct: 679 DFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 200 LISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
L+ L + EL++A+GIL + D G A +I G G+ G +EA D++
Sbjct: 739 LVESLCKKDELEVASGILHKMIDRGYGFDP--AALMPVIDGLGKMGNKKEANSFADKM 794
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 232/533 (43%), Gaps = 83/533 (15%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFD 91
+ ++NK +S + + + + + M+ N T+N LI+ +R +I+ A L
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYA 143
+M + IV+ + +++GY C K + + L D+M E D +++ T+I G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGY---CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 144 KNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSA 195
+ + +A+ L D M +R N V+ V+ G GD+D A +M E +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
S +I L + D A + E + +G V Y++LI+ + +A RL
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMEN--KGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNT 311
+ R+ NVV++N+++ +VK G +V A +L+D M +R D +++
Sbjct: 320 DMIE---------RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 312 MISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK- 366
+I+G+ ++EA +F+ M S P+ +++N++I+GF + + + F M Q+
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 367 ---NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
N +++ +LI G+ + D A +F QM
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQM----------------------------- 461
Query: 424 QMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYA 480
V+ V P++ N+L+ + G + +A VF + K + T+N MI G
Sbjct: 462 -----VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
G D +LF + + P I + ++++ GL EE F M D
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 177/392 (45%), Gaps = 40/392 (10%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
I L + SEA D M R N VT+ +++G KR +I A L ++M I
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 99 VSWNLIISGYF-SCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALK 153
+ +I S S C + ++ LF EM + + ++++++IS R A +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 154 LFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFF----KRMPECDSASLSALISGLV 205
L M ER N V+ NA+I F+ G + A + KR + D + S+LI+G
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 206 RNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
+ LD A + D + V YNTLI G+ ++ +++E LF +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPN--VVTYNTLINGFCKAKRIDEGVELFREMSQ------ 428
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISD 321
R N V++ +++ + + D +A+ +F M + +NT++ G +
Sbjct: 429 ---RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 322 MEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNS 373
+E+A +F+ + P ++N +I G + G ++ D F + K ++I +N+
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
+I+G+ + + A LF +M+ +G PD T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 192/463 (41%), Gaps = 81/463 (17%)
Query: 179 VDSAVGFF----KRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGK-----HD 229
+D A+G F K P + L+S + + + D+ + G++ + H+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISL------GEKMQRLGISHN 119
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
L YN LI + + ++ A L GK + ++V+ +S++ Y
Sbjct: 120 L-YTYNILINCFCRRSQISLALALL---------GKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 290 DIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWN 341
I A L D M E DT + T+I G + EA L M P+ +++
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 342 SIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
+++G + GD+ +A + +M + N++ ++++I K A+ LF++M+ +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
G +P+ T SS++S + Y R
Sbjct: 290 GVRPNVITYSSLISC-------------------------------LCNYERWSDASRLL 318
Query: 458 TVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNA-CAH 516
+ E K +V+T+NA+I + G V+A +L+ +M + I P T+ S++N C H
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 517 AGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWG 576
L +E + F MI+ P V + + ++ + ++ E ++L M + V
Sbjct: 379 DRL-DEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR--GLVGN 434
Query: 577 ALLGSCRVHG-----NVELAQVAAQALISLEPESSGPYVLLYN 614
+ + +HG + + AQ+ + ++S + P ++ YN
Sbjct: 435 TVTYTTLIHGFFQARDCDNAQMVFKQMVS---DGVHPNIMTYN 474
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/564 (22%), Positives = 248/564 (43%), Gaps = 84/564 (14%)
Query: 38 QWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEM 93
+++K +S + + + +F + M+ N T+N +I+ +R +++ A + +M
Sbjct: 67 EFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM 126
Query: 94 PQ----RDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKN 145
+ IV+ N +++G+ C G++ + E L D+M E D V++ T++ G ++
Sbjct: 127 MKLGYGPSIVTLNSLLNGF--CHGNR-ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 146 GRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASL 197
+ +A+ L + M + + V+ AVI G G+ D A+ +M E D
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
S +I L + +D A + E + +G V Y++LI+ G+ +A RL +
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDN--KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
R+ NVV++NS++ + K G ++ A +LFD M +R + +N++I
Sbjct: 302 LE---------RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 314 SGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK--- 366
+G+ ++EA ++F M S PD +++N++I+GF + + + F M ++
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 367 -NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM 425
N +++ +LI G+ + D A +F QM
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQM------------------------------- 441
Query: 426 HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASH 482
V+ V P++ N+L+ + G + +A VF + K D+ T+N M G
Sbjct: 442 ---VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEH 542
G D +LF + + P I + ++++ GL EE F M D G P
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED-GPLPDSGT 557
Query: 543 FASFVDILGRQGQLQEAMDLINSM 566
+ + + R G + +LI M
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEM 581
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 248/532 (46%), Gaps = 67/532 (12%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFD 91
L+ +N I+ L R +LS A M + VT N+L++G I++A L D
Sbjct: 100 LYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 159
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYA 143
+M Q D V++ ++ G F E L + M + C V++ VI+G
Sbjct: 160 QMVEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG-----DVDSAVGFFKRMP----ECDS 194
K G D AL L + M E+ + ++ VI +++ VD A+ F M D
Sbjct: 217 KRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGK-HDLVQAYNTLIAGYGQSGKVEEARRL 253
+ S+LIS L G A+ +L D E K + V +N+LI + + GK+ EA +L
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLL---SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 254 FDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAW 309
FD + R N+V++NS++ + + A+++F M + D +
Sbjct: 333 FDEMIQ---------RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 310 NTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERM-- 363
NT+I+G+ + + + +LF++M + +++ ++I GF Q D A+ F++M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 364 --PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS--VC-TGLV- 417
N++++N+L+ G KN + A+ +F +Q +PD +T +++S +C G V
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY-NIMSEGMCKAGKVE 502
Query: 418 ---DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVIT 471
DL+ L K V PD+ N++I+ + + G EA T+F +MK D T
Sbjct: 503 DGWDLFC-----SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 472 WNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
+N +I + G + EL K+M+ + T+ ++ H G +++G
Sbjct: 558 YNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKG 608
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 199/475 (41%), Gaps = 74/475 (15%)
Query: 161 RNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGI 216
R +S NA LL+ +D AV F M P S L+S + + + D+
Sbjct: 33 REKLSRNA-----LLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL---- 83
Query: 217 LLECGDGDE--GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRN 274
++ G+ E G + YN +I + ++ A + GK + +
Sbjct: 84 VISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL---------GKMMKLGYGPS 134
Query: 275 VVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFK 330
+V+ NS++ + I A L D M E DT + T++ G Q + EA L +
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 331 EMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNE 382
M PD +++ ++I+G + G+ +A + +M + +++ ++++I K
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNS 442
A+ LF++M +G +PD T SS++S
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISC------------------------------ 284
Query: 443 LITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
+ Y R + E K +V+T+N++I +A G ++A +LF +M + I P
Sbjct: 285 -LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 503 TYITFISVLNA-CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
+T+ S++N C H L +E ++ F M++ + P V + + ++ + ++ + M+
Sbjct: 344 NIVTYNSLINGFCMHDRL-DEAQQIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGME 401
Query: 562 LINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG--PYVLLYN 614
L M + V + + +HG + + ++ + S G P ++ YN
Sbjct: 402 LFRDMSRR--GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 151/367 (41%), Gaps = 65/367 (17%)
Query: 322 MEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNS 373
++EA LF EM P P + ++ ++S A++ + F E+M NL ++N
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCTG--------LVD--LYLG 422
+I + A+ + +M G P TL+S+L+ C G LVD + +G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 423 KQ-------------------------MHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
Q + ++V K PDL ++I + G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 458 TVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
+ N+M K DV+ ++ +I + DAL LF +M I P T+ S+++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM---PVKPD 571
+ G + R + M+ + I P V F S +D ++G+L EA L + M + P+
Sbjct: 286 CNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 572 KAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYAN-----------LE 620
+ +L+ +H ++ AQ ++S + P V+ YN N +E
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVS---KDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 621 LWDDAER 627
L+ D R
Sbjct: 402 LFRDMSR 408
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 215/464 (46%), Gaps = 40/464 (8%)
Query: 129 ERDCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVITGFLLNGDVDSAVG 184
E + V+ +++++GY + R+ +A+ L D M + N V+ N +I G L+ A+
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 185 FFKRMP----ECDSASLSALISGLVRNGELDMAAGIL--LECGDGDEGKHDLVQAYNTLI 238
RM + D + +++GL + G+ D+A +L +E G + G V YNT+I
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG----VLIYNTII 263
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
G + +++A LF + + + R NVV+++S++ C G A L
Sbjct: 264 DGLCKYKHMDDALNLFKEM---------ETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 299 DSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQI 350
M ER D ++ +I +V+ + EA KL+ EM P ++++S+I+GF
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 351 GDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
L AK FE M K +++++N+LI G+ K + + +E+F +M G + T
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 407 SSVLSVCTGLVDLYLGKQM-HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM-- 463
+ ++ D + +++ ++V+ V P++ N+L+ + G + +A VF +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 464 -KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEE 522
K + T+N MI G G D +LF + + P + + ++++ G EE
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 523 GRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM 566
F M D G P + + + R G + + +LI M
Sbjct: 555 ADALFKEMKED-GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 237/528 (44%), Gaps = 89/528 (16%)
Query: 4 CLMRLSRLQLPRTLCSRGLASFHKTND-NESSLLHQWNKKISHLIRTGRLSEARTFFDSM 62
C R S+L L + + + ++ N SSLL+ + + R+SEA D M
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY-------CHSKRISEAVALVDQM 177
Query: 63 ----KHRNTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIVSWNLIISGYFSCCGS 114
NTVT+NTLI G + ++A L D M Q D+V++ ++++G C
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL---CKR 234
Query: 115 KFVEEGRKLFDEMP----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVI 170
+ L ++M E + +NT+I G K MD AL LF M E + N V
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVV- 292
Query: 171 TGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL 230
+ S+LIS L G A+ +L D E K +
Sbjct: 293 -------------------------TYSSLISCLCNYGRWSDASRLL---SDMIERKINP 324
Query: 231 -VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
V ++ LI + + GK+ EA +L+D + R ++V+++S++ +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVK---------RSIDPSIVTYSSLINGFCMHD 375
Query: 290 DIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWN 341
+ A+++F+ M + D +NT+I G+ + +EE ++F+EM + +++N
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 342 SIISGFAQIGDLKVAKDFFERMPQ----KNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
+I G Q GD +A++ F+ M N++++N+L+ G KN + A+ +F +Q
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 398 GEKPDRHTLSSVLS-VC-TGLV----DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCG 451
+P +T + ++ +C G V DL+ L K V PD+ N++I+ + R G
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFC-----NLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 452 AIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
+ EA +F EMK + +N +I G + EL K+M+
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 161/321 (50%), Gaps = 40/321 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ IS L GR S+A M R + T++ LI VK ++ +A +L+DEM
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 95 QRDI----VSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNG 146
+R I V+++ +I+G+ C ++E +++F+ M + C V++NT+I G+ K
Sbjct: 354 KRSIDPSIVTYSSLINGF---CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM-----PECDSASL 197
R+++ +++F M +R N V+ N +I G GD D A FK M P + +
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP-NIMTY 469
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ L+ GL +NG+L+ A ++ E + + YN +I G ++GKVE+ LF +
Sbjct: 470 NTLLDGLCKNGKLEKAM-VVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTC----AWNTMI 313
+ + +VV++N+M+ + + G A LF M E T +NT+I
Sbjct: 528 ---------SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 314 SGYVQISDMEEASKLFKEMPS 334
++ D E +++L KEM S
Sbjct: 579 RARLRDGDREASAELIKEMRS 599
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 146/351 (41%), Gaps = 70/351 (19%)
Query: 322 MEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMP------------- 364
+++A LF EM P P + ++ ++S A++ V E+M
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 365 --------------------------QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
+ N+++ +SL+ GY ++ A+ L QM + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 399 EKPDRHTLSSVL---------SVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSR 449
+P+ T ++++ S L+D ++V K PDL ++ +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALID--------RMVAKGCQPDLVTYGVVVNGLCK 233
Query: 450 CGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYIT 506
G A + N+M K V+ +N +I G + DAL LFK+M+ I P +T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 507 FISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM 566
+ S+++ + G + R + MI + I P V F++ +D ++G+L EA L + M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 567 ---PVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
+ P + +L+ +H ++ A+ + ++S + P V+ YN
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS---KHCFPDVVTYN 400
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 224/474 (47%), Gaps = 68/474 (14%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFD---EMPQR-DIVSWNLIISGYFSCCGSKFVEEGR 121
+T+T++TL++G +++A L D EM QR D+V+ + +I+G C V E
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGL---CLKGRVSEAL 195
Query: 122 KLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERN----AVSSNAVITGF 173
L D M E D V++ V++ K+G AL LF M ERN V + VI
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 174 LLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
+G D A+ F M + D + S+LI GL +G+ D A +L E G D
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-IGRNIIPD 314
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
+V ++ LI + + GK+ EA+ L++ + R + +++NS++ + K
Sbjct: 315 VV-TFSALIDVFVKEGKLLEAKELYNEMIT---------RGIAPDTITYNSLIDGFCKEN 364
Query: 290 DIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWN 341
+ A ++FD M E D ++ +I+ Y + +++ +LF+E+ S P+ +++N
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 342 SIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
+++ GF Q G L AK+ F+ M + +++++ L+ G N + A+E+F +MQ
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-- 482
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMH------------QLVTKTVIPDLPINNSLIT 445
R TL G+ ++ + + L K V PD+ N +I
Sbjct: 483 ---KSRMTLG------IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 446 MYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMK 496
+ G++ EA +F +MK D T+N +I + + ++EL ++MK
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 229/516 (44%), Gaps = 67/516 (12%)
Query: 147 RMDQALKLFDAM----PERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLS 198
+++ A+ LF++M P + N + + D +GF K M E D +++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 199 ALISGLVRNGELDMAAGILLECGDG-DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+I+ R +L A +L G G ++TL+ G+ G+V EA L DR+
Sbjct: 110 IMINCYCRKKKLLFAFSVL---GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYV 317
+ R ++V+ ++++ G + A L D M E G+
Sbjct: 167 VE---------MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY----------GF- 206
Query: 318 QISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----ISWNS 373
PD +++ +++ + G+ +A D F +M ++N+ + ++
Sbjct: 207 ----------------QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 374 LIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCTGLVDLYLGKQMHQLVTKT 432
+I K+ + A+ LF++M+++G K D T SS++ +C K + +++ +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 433 VIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDAL 489
+IPD+ ++LI ++ + G + EA ++NEM D IT+N++I G+ +A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 490 ELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDI 549
++F M P +T+ ++N+ A V++G R F I+ G+ P + + V
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE-ISSKGLIPNTITYNTLVLG 429
Query: 550 LGRQGQLQEAMDLINSMP---VKPDKAVWGALL-GSC---RVHGNVELAQVAAQALISLE 602
+ G+L A +L M V P +G LL G C ++ +E+ + ++ ++L
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTL- 488
Query: 603 PESSGPYVLLYNMYANLELWDDAERVRVLMEEKNVK 638
G Y ++ + N DDA + + +K VK
Sbjct: 489 --GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 156/309 (50%), Gaps = 39/309 (12%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQR-- 96
I ++ G+L EA+ ++ M R +T+T+N+LI G K + +A Q+FD M +
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 97 --DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQ 150
DIV+++++I+ Y C +K V++G +LF E+ + + +++NT++ G+ ++G+++
Sbjct: 382 EPDIVTYSILINSY---CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 151 ALKLFDAMPERNAVSSNAVITGFLL-----NGDVDSAVGFFKRMPE----CDSASLSALI 201
A +LF M R V + V G LL NG+++ A+ F++M + + +I
Sbjct: 439 AKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 202 SGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ 261
G+ ++D A + C D+G V YN +I G + G + EA LF ++
Sbjct: 498 HGMCNASKVDDAWSLF--CSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM---- 551
Query: 262 GDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISD 321
KEDG + ++N ++ ++ ++S+ EL + M C ++ S + D
Sbjct: 552 ---KEDG--CTPDDFTYNILIRAHLGGSGLISSVELIEEM---KVCGFSADSSTIKMVID 603
Query: 322 MEEASKLFK 330
M +L K
Sbjct: 604 MLSDRRLDK 612
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/543 (24%), Positives = 240/543 (44%), Gaps = 71/543 (13%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP- 94
NK I +R R A + + M+ R N ++N LI +++ + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 95 ---QRDIVSWNLIISGYFSCCGSKFVE--------------EGRKLFDEMPERD----CV 133
Q D+V++N ++ G C + E E LFD+M E +
Sbjct: 170 LGFQPDVVTFNTLLHGL--CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVI 227
Query: 134 SWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM 189
++NT+I+G GR+ +A L + M + + V+ ++ G GD SA+ +M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 190 PEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
E D SA+I L ++G A + E + +G V YN +I G+ G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE--KGIAPNVFTYNCMIDGFCSFG 345
Query: 246 KVEEARRLF-DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER 304
+ +A+RL D I R +V+++N+++ VK G + A +L D M R
Sbjct: 346 RWSDAQRLLRDMIE----------REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 305 ----DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
DT +N+MI G+ + + ++A +F M SPD +++N+II + + +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 361 ERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVCTG 415
+ ++ L+ ++N+LI G+ + ++ A +LF +M G PD T + +L C
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 416 -----LVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFY---K 467
++L+ QM ++ TV ++ I+ + + EA +F + +
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHG-----MCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
DV T+N MI G+ DA LF +MK P T+ +++ C AG +++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 528 NSM 530
+ M
Sbjct: 631 SEM 633
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 172/400 (43%), Gaps = 69/400 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ I L + G S+A+ F M + N T+N +I G + A++L +M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG 146
+R D++++N +IS G F E KL DEM R D V++N++I G+ K+
Sbjct: 359 EREINPDVLTFNALISASVKE-GKLF--EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
R D A +FD M + V+ N +I + VD + + + GLV
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR----------RGLVA 465
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
N YNTLI G+ + + A+ LF + +
Sbjct: 466 N-----------------------TTTYNTLIHGFCEVDNLNAAQDLFQEMIS------- 495
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD----SMGERDTCAWNTMISGYVQISDM 322
+ ++ N ++ + + + A ELF+ S + DT A+N +I G + S +
Sbjct: 496 --HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 323 EEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSL 374
+EA LF +P PD ++N +ISGF + A F +M + + ++N+L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT 414
I G K + +IEL S+M+ G D T+ V + T
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT 653
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 175/437 (40%), Gaps = 101/437 (23%)
Query: 265 KEDGRRFRRNVVSWNSMMMCY----------------VKVG---DIVSARELFDSMGERD 305
K + RR N+ S+N ++ C+ K+G D+V+ L + D
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFE 361
+ + GY+ + EA LF +M +P +++N++I+G G + A
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 362 RMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
+M K L +++ +++ G K D K A+ L S+M+
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME---------------------- 288
Query: 418 DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNA 474
+ H + PD+ I +++I + G +A +F+EM +V T+N
Sbjct: 289 ------ETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR--------- 525
MI G+ S G DA L + M +I+P +TF ++++A G + E +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 526 ------QFNSMIN---------------DYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
+NSMI D P V F + +D+ R ++ E M L+
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 565 SMPVK---PDKAVWGALL-GSCRVHGNVELAQVAAQALIS--LEPESSGPYVLLYNMYAN 618
+ + + + L+ G C V N+ AQ Q +IS + P++ +LLY N
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEV-DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 619 LELWDDAERVRVLMEEK 635
+L + E V+ K
Sbjct: 516 EKLEEALELFEVIQMSK 532
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 239/543 (44%), Gaps = 71/543 (13%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP- 94
NK I +R R A + + M+ R N ++N LI +++ + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 95 ---QRDIVSWNLIISGYFSCCGSKFVE--------------EGRKLFDEMPERD----CV 133
Q D+V++N ++ G C + E E LFD+M E +
Sbjct: 170 LGFQPDVVTFNTLLHGL--CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVI 227
Query: 134 SWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM 189
++NT+I+G GR+ +A L + M + + V+ ++ G GD SA+ +M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 190 PEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
E D SA+I L ++G A + E + +G V YN +I G+ G
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE--KGIAPNVFTYNCMIDGFCSFG 345
Query: 246 KVEEARRLF-DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER 304
+ +A+RL D I R +V+++N+++ VK G + A +L D M R
Sbjct: 346 RWSDAQRLLRDMIE----------REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 305 ----DTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
DT +N+MI G+ + + ++A +F M SPD +++N+II + + +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 361 ERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVCTG 415
+ ++ L+ ++N+LI G+ + ++ A +LF +M G PD T + +L C
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 416 -----LVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFY---K 467
++L+ QM ++ TV N +I + + EA +F + +
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVA-----YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEP 570
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
DV T+N MI G+ DA LF +MK P T+ +++ C AG +++
Sbjct: 571 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 528 NSM 530
+ M
Sbjct: 631 SEM 633
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 30/279 (10%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N IS ++ G+L EA D M HR +TVT+N++I G K A+ +FD M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----SWNTVISGYAKNGRMDQ 150
D+V++N II Y C +K V+EG +L E+ R V ++NT+I G+ + ++
Sbjct: 429 SPDVVTFNTIIDVY---CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 151 ALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALIS 202
A LF M + ++ N ++ GF N ++ A+ F+ + + D+ + + +I
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
G+ + ++D A + C G VQ YN +I+G+ + +A LF ++ D G
Sbjct: 546 GMCKGSKVDEAWDLF--CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNG 602
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
++ ++N+++ +K G+I + EL M
Sbjct: 603 HEPDNS--------TYNTLIRGCLKAGEIDKSIELISEM 633
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 169/392 (43%), Gaps = 69/392 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ I L + G S+A+ F M + N T+N +I G + A++L +M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG 146
+R D++++N +IS G F E KL DEM R D V++N++I G+ K+
Sbjct: 359 EREINPDVLTFNALISASVKE-GKLF--EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 147 RMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVR 206
R D A +FD M + V+ N +I + VD + + + GLV
Sbjct: 416 RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR----------RGLVA 465
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
N YNTLI G+ + + A+ LF + +
Sbjct: 466 N-----------------------TTTYNTLIHGFCEVDNLNAAQDLFQEMIS------- 495
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFD----SMGERDTCAWNTMISGYVQISDM 322
+ ++ N ++ + + + A ELF+ S + DT A+N +I G + S +
Sbjct: 496 --HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 323 EEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSL 374
+EA LF +P PD ++N +ISGF + A F +M + + ++N+L
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
I G K + +IEL S+M+ G D T+
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 175/437 (40%), Gaps = 101/437 (23%)
Query: 265 KEDGRRFRRNVVSWNSMMMCY----------------VKVG---DIVSARELFDSMGERD 305
K + RR N+ S+N ++ C+ K+G D+V+ L + D
Sbjct: 131 KMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLED 190
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFE 361
+ + GY+ + EA LF +M +P +++N++I+G G + A
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 362 RMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV 417
+M K L +++ +++ G K D K A+ L S+M+
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME---------------------- 288
Query: 418 DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNA 474
+ H + PD+ I +++I + G +A +F+EM +V T+N
Sbjct: 289 ------ETH------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 336
Query: 475 MIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRR--------- 525
MI G+ S G DA L + M +I+P +TF ++++A G + E +
Sbjct: 337 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 396
Query: 526 ------QFNSMIN---------------DYGIEPRVEHFASFVDILGRQGQLQEAMDLIN 564
+NSMI D P V F + +D+ R ++ E M L+
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Query: 565 SMPVK---PDKAVWGALL-GSCRVHGNVELAQVAAQALIS--LEPESSGPYVLLYNMYAN 618
+ + + + L+ G C V N+ AQ Q +IS + P++ +LLY N
Sbjct: 457 EISRRGLVANTTTYNTLIHGFCEV-DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515
Query: 619 LELWDDAERVRVLMEEK 635
+L + E V+ K
Sbjct: 516 EKLEEALELFEVIQMSK 532
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 163/663 (24%), Positives = 285/663 (42%), Gaps = 121/663 (18%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
N+ +S L++ L+EA+ + M + VT L+ ++ + A+A ++ +
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 96 RDIVSWNLIIS-GYFSCCGSKFVEEGRKLFDEMPERD-CV----SWNTVISGYAKNGRMD 149
R +L+ S +CC + + L EM E+ CV ++ +VI K G MD
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 150 QALKLFDAM----PERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALI 201
A++L D M N V++ ++ITG N D+ SA+ F +M P +S + S LI
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 202 SGLVRNGELDMAAGILLECGDGDE--GKHDLVQAYNTLIAGYGQSGKVEEARRLFDR--- 256
+NGE++ A LE E G V +T+I G+ + K EEA +LFD
Sbjct: 382 EWFRKNGEMEKA----LEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 257 --IPN------------DQGDGKE--------DGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
+ N QG E + R NVVS+N++M+ + + ++ A
Sbjct: 438 TGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 295 RELFDSMGER-------------DTC--------------------------AWNTMISG 315
R +F ++ E+ D C + T+I+G
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 316 YVQISDMEEASKLFKEMPSPDAL-----SWNSIISGFAQIGDLKVAKDFFERM----PQK 366
++ +A +L M L S+NSII GF + G++ A +E M
Sbjct: 558 LCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP 617
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ-- 424
N+I++ SL+ G KN A+E+ +M+ +G K D + L+D + +
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD-------IPAYGALIDGFCKRSNM 670
Query: 425 ------MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAM 475
+L+ + + P PI NSLI+ + G + A ++ +M D+ T+ +
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 476 IGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYG 535
I G G + A EL+ +M+ + + P I + ++N + G + + F M +
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN-N 789
Query: 536 IEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK---PDKAVWGALLGSCRVHGNVELAQ 592
+ P V + + + R+G L EA L + M K PD A + L+ S +V GN++ +
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV-SGQV-GNLQPVR 847
Query: 593 VAA 595
A+
Sbjct: 848 AAS 850
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 225/509 (44%), Gaps = 73/509 (14%)
Query: 48 RTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP----QRDIV 99
+ L A FD M+ N+VT++ LI K E+ KA + + +M +
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPER---DCVSWNTVISGYAKNGRMDQALKLFD 156
+ II G+ G K EE KLFDE E + NT++S K G+ D+A +L
Sbjct: 411 HVHTIIQGWLK--GQKH-EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLS 467
Query: 157 AMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNG 208
M R N VS N V+ G ++D A F + E ++ + S LI G RN
Sbjct: 468 KMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNH 527
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ------- 261
+ A ++ + + +V Y T+I G + G+ +AR L + ++
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVV--YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 262 ----------GDGKED----------GRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSM 301
+G+ D G NV+++ S+M K + A E+ D M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 302 GER----DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDL 353
+ D A+ +I G+ + S+ME AS LF E+ +P +NS+ISGF +G++
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 354 KVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSV 409
A D +++M + +L ++ +LI G K+ + A EL+++MQ G PD + +
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 410 LSVCTGLVD----LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM-- 463
++ GL + + K ++ V P++ I N++I + R G + EA + +EM
Sbjct: 766 VN---GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 464 -KFYKDVITWNAMIGGYASHGLAVDALEL 491
D T++ ++ G + V A L
Sbjct: 823 KGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/446 (20%), Positives = 191/446 (42%), Gaps = 43/446 (9%)
Query: 163 AVSSNAVITGFLLNGDVDSAVGF-FKRMPECDSASLSALISGLVRNGELDMAAGILLECG 221
+ S+ + L++ VDSA F F E +S + + L++ ++ + D A I+ +
Sbjct: 135 STSNPTPMASVLVSKLVDSAKSFGF----EVNSRAFNYLLNAYSKDRQTDHAVDIVNQML 190
Query: 222 DGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSM 281
+ D N ++ Q + EA+ L+ R+ DG V+ +
Sbjct: 191 ELD--VIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDN---------VTTQLL 239
Query: 282 MMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS--- 334
M ++ A E+ ER D+ ++ + + D+ A+ L +EM
Sbjct: 240 MRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
Query: 335 --PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAI 388
P ++ S+I + G++ A + M N+++ SLI G+ KN D A+
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 389 ELFSQMQLEGEKPDRHTLSSVLS--VCTGLVD--LYLGKQMHQLVTKTVIPDLPINNSLI 444
LF +M+ EG P+ T S ++ G ++ L K+M L + P + +++I
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL---GLTPSVFHVHTII 416
Query: 445 TMYSRCGAIGEACTVFNEM--KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHP 502
+ + EA +F+E +V N ++ G +A EL +M+ I P
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 503 TYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
+++ +V+ ++ R F++++ + G++P ++ +D R Q A+++
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNIL-EKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 563 INSMP---VKPDKAVWGALL-GSCRV 584
+N M ++ + V+ ++ G C+V
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKV 561
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 205/420 (48%), Gaps = 47/420 (11%)
Query: 178 DVDSAVGFFK------RMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
+ D AVGF++ R SA+IS L R G++ +A I G G + V
Sbjct: 211 ECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYG--NTV 268
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG-D 290
A++ LI+ YG+SG EEA +F+ + KE G R N+V++N+++ K G +
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSM-------KEYG--LRPNLVTYNAVIDACGKGGME 319
Query: 291 IVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNS 342
+ FD M + D +N++++ + E A LF EM + D S+N+
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 343 IISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEG 398
++ + G + +A + +MP K N++S++++I G+ K + A+ LF +M+ G
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 399 EKPDRHTLSSVLSVCTGL------VDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGA 452
DR + +++LS+ T + +D+ + ++ + + D+ N+L+ Y + G
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDI-----LREMASVGIKKDVVTYNALLGGYGKQGK 494
Query: 453 IGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
E VF EMK +++T++ +I GY+ GL +A+E+F++ K + + + +
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN--SMP 567
+++A GLV + M + GI P V + S +D GR + + D N S+P
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLP 613
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 228/519 (43%), Gaps = 75/519 (14%)
Query: 98 IVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG-RMDQAL 152
+ +++ +IS Y S EE +F+ M E + V++N VI K G Q
Sbjct: 268 VYAFSALISAYGR---SGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVA 324
Query: 153 KLFDAMPERNAVSSNAVITGFLL-----NGDVDSAVGFFKRMP----ECDSASLSALISG 203
K FD M +RN V + + LL G ++A F M E D S + L+
Sbjct: 325 KFFDEM-QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
+ + G++D+A IL + + V +Y+T+I G+ ++G+ +EA LF G+
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPN--VVSYSTVIDGFAKAGRFDEALNLF-------GE 434
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQI 319
+ G R VS+N+++ Y KVG A ++ M ++D +N ++ GY +
Sbjct: 435 MRYLGIALDR--VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 320 SDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----ISW 371
+E K+F EM P+ L+++++I G+++ G K A + F L + +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ--MHQLV 429
++LI KN A+ L +M EG P+ T +S++ G+ M +
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA--------FGRSATMDRSA 604
Query: 430 TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDAL 489
+ LP ++S ++ + +F ++ + T G L
Sbjct: 605 DYSNGGSLPFSSSALSALTETEG-NRVIQLFGQLTTESNNRTTKDCEEGMQELSC---IL 660
Query: 490 ELFKQMKRLKIHPTYITFISVLNACAH------AGLVEEGRRQFNSMINDYGIEPRVEHF 543
E+F++M +L+I P +TF ++LNAC+ A ++ E R F++ + YG+ +
Sbjct: 661 EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKV--YGVVHGL--- 715
Query: 544 ASFVDILGRQG----QLQEAMDLINSMPVKPDKAVWGAL 578
++G++ Q Q D +N M A + AL
Sbjct: 716 -----LMGQRENVWLQAQSLFDKVNEMDGSTASAFYNAL 749
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 192/433 (44%), Gaps = 70/433 (16%)
Query: 58 FFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYF 109
FFD M+ + +T+N+L++ + AR LFDEM R D+ S+N ++
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD--- 382
Query: 110 SCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVS 165
+ C ++ ++ +MP + + VS++TVI G+AK GR D+AL LF M
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR------ 436
Query: 166 SNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDE 225
G L D S + L+S + G + A IL E
Sbjct: 437 ----YLGIAL-----------------DRVSYNTLLSIYTKVGRSEEALDILREM--ASV 473
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
G V YN L+ GYG+ GK +E +++F + + N++++++++ Y
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH---------VLPNLLTYSTLIDGY 524
Query: 286 VKVGDIVSAREL---FDSMGER-DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDA 337
K G A E+ F S G R D ++ +I + + A L EM SP+
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLE 397
+++NSII F + + + D+ +L +S ++ + E + I+LF Q+ E
Sbjct: 585 VTYNSIIDAFGRSATMDRSADYSN---GGSLPFSSSALSALTETEGNR-VIQLFGQLTTE 640
Query: 398 GEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
+ + +++++ ++MHQL K P++ ++++ SRC + +A
Sbjct: 641 SNNRTTKDCEEGMQELSCILEVF--RKMHQLEIK---PNVVTFSAILNACSRCNSFEDAS 695
Query: 458 TVFNEMKFYKDVI 470
+ E++ + + +
Sbjct: 696 MLLEELRLFDNKV 708
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 135/286 (47%), Gaps = 16/286 (5%)
Query: 341 NSIISGFAQIGDLKVAKDFFERMPQ----KNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
+++IS + G + +AK FE + ++++LI+ Y ++ ++ AI +F+ M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 397 EGEKPDRHTLSSVLSVCT--GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIG 454
G +P+ T ++V+ C G+ + K ++ V PD NSL+ + SR G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 455 EACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVL 511
A +F+EM + +DV ++N ++ G A E+ QM +I P +++ +V+
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 512 NACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---V 568
+ A AG +E F M GI + + + I + G+ +EA+D++ M +
Sbjct: 417 DGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 569 KPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
K D + ALLG G + + + ++ E P +L Y+
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVK---KVFTEMKREHVLPNLLTYS 518
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 439 INNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
+ +++I+ R G + A +F + V ++A+I Y GL +A+ +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
K + P +T+ +V++AC G+ + +F + G++P F S + + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 556 LQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVELA-QVAAQALISLEPESSGPYVL 611
+ A +L + M ++ D + LL + G ++LA ++ AQ + + Y
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 612 LYNMYANLELWDDA 625
+ + +A +D+A
Sbjct: 415 VIDGFAKAGRFDEA 428
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 162/650 (24%), Positives = 278/650 (42%), Gaps = 114/650 (17%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR-----NTVTWNTLISGHVKRREIAKARQLF----DEM 93
IS + G+ A FF+S N VT+ TL+S + ++ + R L DE
Sbjct: 178 ISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEG 237
Query: 94 PQRDIVSWNLIISGYFSCCGSKFVE---EGRKLFDEMPERDCVSWNTVISGYAKNGRMDQ 150
+ D V ++ I GYF G V+ + R++ ++ RD VS++ +I G +K G +++
Sbjct: 238 FEFDCVFYSNWIHGYFK--GGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEE 295
Query: 151 ALKLFDAM----PERNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALIS 202
AL L M E N ++ A+I G G ++ A F R+ E D LI
Sbjct: 296 ALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 203 GLVRNGELDMAAGILLECGDGDE-GKHDLVQAYNTLIAGYGQSGKVEEA----------- 250
G+ R G L+ A +L GD ++ G + YNT+I G +G+V EA
Sbjct: 356 GICRKGNLNRAFSML---GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDV 412
Query: 251 ---RRLFDRIPNDQGDGK--EDGRRFRR-----NVVSWNSMMMCYVKVGDIVSARELFDS 300
L D Q E RRF ++V N ++ ++ +G A L+ +
Sbjct: 413 ITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 301 MGERD----TCAWNTMISGYVQISDMEEASKLFKEMPSPD---ALSWNSIISGFAQIGDL 353
M E D T + TMI GY + +EEA ++F E+ A+ +N II + G L
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGML 532
Query: 354 KVAKDFFERMPQKNL-------------ISWNS-------LIAGYDK-NED--------- 383
A + + +K L I N L+ G ++ N D
Sbjct: 533 DTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDA 592
Query: 384 ---------YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVT---K 431
++ AIE++ M+ +G T++ ++ LVD + LV +
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKG-----LTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 432 TVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK------DVITWNAMIGGYASHGLA 485
T + + + + I + C G N F K + IT+N++I G G
Sbjct: 648 TTLSSMDVIDYTIIINGLCKE-GFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
V+AL LF ++ + + P+ +T+ +++ GL + + +SM++ G+ P + + S
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK-GLVPNIIIYNS 765
Query: 546 FVDILGRQGQLQEAMDLINSM---PVKPDKAVWGALL-GSCRVHGNVELA 591
VD + GQ ++AM +++ V PD +++ G C+ G++E A
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK-KGDMEEA 814
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 158/392 (40%), Gaps = 71/392 (18%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHRN----TVTWNTLISGHVKRREIAKARQLFD 91
L N + + G EA + +M + T T+ T+I G+ K +I +A ++F+
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Query: 92 EMPQRDI---VSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAK 144
E+ + + V +N II + C ++ ++ E+ E+ D + T++
Sbjct: 507 ELRKSSVSAAVCYNRIID---ALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHA 563
Query: 145 NGRMDQALKLFDAMPERNAVSSNAVITGFLL----NGDVDSAVGFFKRMPE------CDS 194
NG L L + + N+ ++ +L G ++A+ + M S
Sbjct: 564 NGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS 623
Query: 195 ASLSALISGL---------VRNGELDMAAGILLE--------CGDG-------------D 224
L L+ L V GE +++ +++ C +G
Sbjct: 624 TILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKS 683
Query: 225 EGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMC 284
G YN+LI G Q G + EA RLFD + N E V++ ++
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSE---------VTYGILIDN 734
Query: 285 YVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEM----PSPD 336
K G + A +L DSM + + +N+++ GY ++ E+A ++ +PD
Sbjct: 735 LCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPD 794
Query: 337 ALSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
A + +S+I G+ + GD++ A F KN+
Sbjct: 795 AFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 43/293 (14%)
Query: 335 PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
P +L++ S+I F + G++ A + E M KN+ N +
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNV------------NYPF---------- 169
Query: 395 QLEGEKPDRHTLSSVLS-VC-TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGA 452
D S+V+S C G +L LG + + ++P+L +L++ + G
Sbjct: 170 -------DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGK 222
Query: 453 IGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
+ E + ++ F D + ++ I GY G VDAL ++M ++ +++
Sbjct: 223 VDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSI 282
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN---SM 566
+++ + G VEE MI + G+EP + + + + L + G+L+EA L N S+
Sbjct: 283 LIDGLSKEGNVEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV 341
Query: 567 PVKPDKAVWGALL-GSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYAN 618
++ D+ ++ L+ G CR GN+ A L +E P +L YN N
Sbjct: 342 GIEVDEFLYVTLIDGICR-KGNL---NRAFSMLGDMEQRGIQPSILTYNTVIN 390
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 222/468 (47%), Gaps = 48/468 (10%)
Query: 60 DSMKH---RNTVTWNTLISGHVKRREIAKARQLFDEM----PQRDIVSWNLIISGYFSCC 112
D KH N+V + TLI K + +A QL +EM D ++N +I G C
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL---C 298
Query: 113 GSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNA 168
+ E K+ + M R D +++ +++G K GR+D A LF +P+ V N
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 169 VITGFLLNGDVDSAVGFFKRMPEC-----DSASLSALISGLVRNGELDMAAGILLECGDG 223
+I GF+ +G +D A M D + ++LI G + G + +A +L +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM--R 416
Query: 224 DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMM 283
++G V +Y L+ G+ + GK++EA + + + D + N V +N ++
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG---------LKPNTVGFNCLIS 467
Query: 284 CYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----P 335
+ K I A E+F M + D +N++ISG ++ +++ A L ++M S
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELF 391
+ +++N++I+ F + G++K A+ M + + I++NSLI G + + A LF
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 392 SQMQLEGEKPDRHTLSSVLS-VC-TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSR 449
+M +G P + + +++ +C +G+V+ + Q ++V + PD+ NSLI R
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ-KEMVLRGSTPDIVTFNSLINGLCR 646
Query: 450 CGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQ 494
G I + T+F +++ D +T+N ++ G DA L +
Sbjct: 647 AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/552 (23%), Positives = 246/552 (44%), Gaps = 63/552 (11%)
Query: 68 VTWNTLISGHVKRREIAKARQLFDEMPQRDI----VSWNLIISGYFSCCGSKFVEEGRKL 123
V L+SG+ + A +F +M R I ++ +++ + C ++ L
Sbjct: 187 VVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAF---CAVNEIDSALSL 239
Query: 124 FDEMPERDCVS----WNTVISGYAKNGRMDQALKLFDAMPERNAV----SSNAVITGFLL 175
+M + CV + T+I +K R+++AL+L + M V + N VI G
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 176 NGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
++ A RM D + L++GL + G +D A + + +
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE------I 353
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDI 291
+NTLI G+ G++++A+ + + G +V ++NS++ Y K G +
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG--------IVPDVCTYNSLIYGYWKEGLV 405
Query: 292 VSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSI 343
A E+ M + + ++ ++ G+ ++ ++EA + EM + P+ + +N +
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 344 ISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
IS F + + A + F MP+K ++ ++NSLI+G + ++ K A+ L M EG
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 400 KPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPIN----NSLITMYSRCGAIGE 455
+ T +++++ ++ K+ +LV + V P++ NSLI R G + +
Sbjct: 526 VANTVTYNTLINAFLRRGEI---KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 456 ACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
A ++F +M I+ N +I G G+ +A+E K+M P +TF S++N
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM---PVK 569
AG +E+G F + + GI P F + + L + G + +A L++
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 570 PDKAVWGALLGS 581
P+ W LL S
Sbjct: 702 PNHRTWSILLQS 713
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 186/395 (47%), Gaps = 45/395 (11%)
Query: 46 LIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQR-----DIVS 100
L + GR+ A+ F + V +NTLI G V + A+ + +M D+ +
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 101 WNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYAKNGRMDQALKLFD 156
+N +I GY+ V ++ +M + C S+ ++ G+ K G++D+A + +
Sbjct: 392 YNSLIYGYWK---EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 157 AMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE--C--DSASLSALISGLVRNG 208
M + N V N +I+ F + AV F+ MP C D + ++LISGL
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 209 ELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDG 268
E+ A +L + EG YNTLI + + G+++EAR+L + + QG ++
Sbjct: 509 EIKHALWLLRDM--ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF-QGSPLDE- 564
Query: 269 RRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERD-----TCAWNTMISGYVQISDME 323
+++NS++ + G++ AR LF+ M RD + N +I+G + +E
Sbjct: 565 -------ITYNSLIKGLCRAGEVDKARSLFEKM-LRDGHAPSNISCNILINGLCRSGMVE 616
Query: 324 EASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----ISWNSLI 375
EA + KEM +PD +++NS+I+G + G ++ F ++ + + +++N+L+
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 376 AGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
+ K A L + +G P+ T S +L
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 159/337 (47%), Gaps = 21/337 (6%)
Query: 274 NVVSWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEASKLF 329
N V + +++ K + A +L + M D +N +I G + + EA+K+
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 330 KEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYK 385
M +PD +++ +++G +IG + AKD F R+P+ ++ +N+LI G+ +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 386 GAIELFSQMQLE-GEKPDRHTLSSVLSVC--TGLVDLYLGKQMHQLVTKTVIPDLPINNS 442
A + S M G PD T +S++ GLV L L + +H + K P++
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL-EVLHDMRNKGCKPNVYSYTI 429
Query: 443 LITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLK 499
L+ + + G I EA V NEM + + +N +I + +A+E+F++M R
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 500 IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEA 559
P TF S+++ ++ MI++ G+ + + ++ R+G+++EA
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEA 548
Query: 560 MDLINSMPVKP---DKAVWGALL-GSCRVHGNVELAQ 592
L+N M + D+ + +L+ G CR G V+ A+
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRA-GEVDKAR 584
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 53/259 (20%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFD 91
++ +N IS L + A M NTVT+NTLI+ ++R EI +AR+L +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 92 EMPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
EM V +G L D +++N++I G + G +D+A
Sbjct: 554 EM-----------------------VFQGSPL-------DEITYNSLIKGLCRAGEVDKA 583
Query: 152 LKLFDAMPE----RNAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALISG 203
LF+ M + +S N +I G +G V+ AV F K M D + ++LI+G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
L R G ++ G+ + EG +NTL++ + G V +A L D +
Sbjct: 644 LCRAGRIE--DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLD-------E 694
Query: 264 GKEDGRRFRRNVVSWNSMM 282
G EDG F N +W+ ++
Sbjct: 695 GIEDG--FVPNHRTWSILL 711
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/567 (22%), Positives = 252/567 (44%), Gaps = 68/567 (11%)
Query: 59 FDSMKHRNTVTWNTLISGHVKRREIAKARQLFDEMPQRDIVSWNLIISGYFSCCG-SKFV 117
F+ + + + ++ + +R ++ +AR+ F+ M R I + I + + +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 118 EEG----RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGF 173
+E RK+ +E E V+++ ++ G++K G + A FD +R + NA I G
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE-AKRIHKTLNASIYGK 419
Query: 174 LLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDG-----DEGK- 227
++ + C+ AL+ + G +D I DG DE K
Sbjct: 420 IIYAHCQT----------CNMERAEALVREMEEEG-IDAPIAIYHTMMDGYTMVADEKKG 468
Query: 228 ------------HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
V Y LI Y + GK+ +A + R+ ++G + N+
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEG--------VKHNL 519
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKE 331
+++ M+ +VK+ D +A +F+ M + D +N +IS + + +M+ A + KE
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 332 MPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNED 383
M P ++ II G+A+ GD++ + + F+ M + + ++N LI G +
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 384 YKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH---QLVTKTVIPDLPIN 440
+ A+E+ +M L G + HT + ++ + D GK +L + + D+
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDT--GKAFEYFTRLQNEGLDVDIFTY 697
Query: 441 NSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
+L+ + G + A V EM ++ +N +I G+A G +A +L +QMK+
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
+ P T+ S ++AC+ AG + + M G++P ++ + + + R +
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPE 816
Query: 558 EAM---DLINSMPVKPDKAVWGALLGS 581
+A+ + + +M +KPDKAV+ LL S
Sbjct: 817 KALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 191/478 (39%), Gaps = 103/478 (21%)
Query: 48 RTGRLSEARTFFDSMK--HR--NTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIV 99
+ G A +FD K H+ N + +I H + + +A L EM + I
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 100 SWNLIISGYFSCCGSKFVEEGRKLFDEMPE----RDCVSWNTVISGYAKNGRMDQALKLF 155
++ ++ GY K +G +F + E V++ +I+ Y K G++ +AL++
Sbjct: 451 IYHTMMDGYTMVADEK---KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 156 DAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAG 215
M E V N ++NG V D A+ A+ +V+ G M
Sbjct: 508 RVMKE-EGVKHNLKTYSMMINGFVKLK----------DWANAFAVFEDMVKEG---MKPD 553
Query: 216 ILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNV 275
++L YN +I+ + G ++ A + + R R
Sbjct: 554 VIL---------------YNNIISAFCGMGNMDRAIQTVKEMQK---------LRHRPTT 589
Query: 276 VSWNSMMMCYVKVGDIVSARELFDSMGERDTC-----AWNTMISGYVQISDMEEASKLFK 330
++ ++ Y K GD+ + E+FD M R C +N +I+G V+ ME+A ++
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMM-RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 331 EMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQ--------------------- 365
EM S + ++ I+ G+A +GD A ++F R+
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 366 ------------------KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLS 407
+N +N LI G+ + D A +L QM+ EG KPD HT +
Sbjct: 709 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Query: 408 SVLSVCTGLVDLYLGKQ-MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK 464
S +S C+ D+ Q + ++ V P++ +LI ++R +A + + EMK
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 140/642 (21%), Positives = 273/642 (42%), Gaps = 99/642 (15%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
N + L + GR EA+ F +K ++VT+N ++ + K EI +A +L EM +
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 96 R----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERD----CVSWNTVISGYAKNGR 147
D++ N +I+ + + V+E K+F M E V++NT+++G KNG+
Sbjct: 532 NGCEPDVIVVNSLINTLYK---ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 148 MDQALKLFDAMPER---------------------------------------NAVSSNA 168
+ +A++LF+ M ++ + + N
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 648
Query: 169 VITGFLLNGDVDSAVGFFKRMPEC---DSASLSALISGLVRNGELDMAAGI----LLECG 221
+I G + NG V A+ FF +M + D +L L+ G+V+ ++ A I L C
Sbjct: 649 IIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCA 708
Query: 222 DGDEGK--HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWN 279
D DL+ +++A G V + RL + N DG ++ ++
Sbjct: 709 DQPANLFWEDLI---GSILAEAGIDNAVSFSERL---VANGIC---RDGDSILVPIIRYS 759
Query: 280 SMMMCYVKVGDIVSARELFDSMG-----ERDTCAWNTMISGYVQISDMEEASKLFKEMPS 334
K ++ AR LF+ + +N +I G ++ +E A +F ++ S
Sbjct: 760 C------KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 335 ----PDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYKG 386
PD ++N ++ + + G + + ++ M + N I+ N +I+G K +
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 387 AIELFSQMQLEGE-KPDRHTLSSVLSVCTGLVDLYLGKQMHQ-LVTKTVIPDLPINNSLI 444
A++L+ + + + P T ++ + LY KQ+ + ++ P+ I N LI
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 445 TMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIH 501
+ + G AC +F M D+ T++ ++ G + L FK++K ++
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 502 PTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMD 561
P + + ++N + +EE FN M GI P + + S + LG G ++EA
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 562 LINSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALIS 600
+ N + ++P+ + AL+ + G E A Q +++
Sbjct: 1054 IYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 151/634 (23%), Positives = 267/634 (42%), Gaps = 78/634 (12%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFD 91
LH +N I L+R RL +A F +M+ T+ I + K + A + F+
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 92 EMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPE----RDCVSWNTVISGYA 143
+M + +IV+ N + +S + E +++F + + D V++N ++ Y+
Sbjct: 458 KMKTKGIAPNIVACN---ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNG-----DVDSAVGFFKRMPECD----S 194
K G +D+A+KL M E N + ++ L+N VD A F RM E
Sbjct: 515 KVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
+ + L++GL +NG++ A I L G +G +NTL ++ +V A ++
Sbjct: 574 VTYNTLLAGLGKNGKIQEA--IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE---RDTCAWNT 311
++ D G +V ++N+++ VK G + A F M + D T
Sbjct: 632 FKM-MDMG--------CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT 682
Query: 312 MISGYVQISDMEEASK-----LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
++ G V+ S +E+A K L+ P L W +I + A F ER+
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 367 NLIS-----WNSLIAGYDKNEDYKGAIELFSQMQLE-GEKPDRHTLSSVLSVCTGLV--- 417
+ +I K+ + GA LF + + G +P T + ++ GL+
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIG---GLLEAD 799
Query: 418 ------DLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK---D 468
D++L Q+ + IPD+ N L+ Y + G I E ++ EM ++ +
Sbjct: 800 MIEIAQDVFL-----QVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 469 VITWNAMIGGYASHGLAVDALELFKQ-MKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
IT N +I G G DAL+L+ M PT T+ +++ + +G + E ++ F
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSCRV 584
M+ DYG P + ++ G+ G+ A L M V+PD + L+ +
Sbjct: 915 EGML-DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 585 HGNVELAQVAAQALISLEPESSGPYVLLYNMYAN 618
G V+ L+ P V+ YN+ N
Sbjct: 974 VGRVD---EGLHYFKELKESGLNPDVVCYNLIIN 1004
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 169/364 (46%), Gaps = 45/364 (12%)
Query: 73 LISGHVKRREIAKARQLFDEMP-----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEM 127
+I K ++ AR LF++ Q + ++NL+I G + +E + +F ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE---ADMIEIAQDVFLQV 811
Query: 128 PERDCV----SWNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDV 179
C+ ++N ++ Y K+G++D+ +L+ M E N ++ N VI+G + G+V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 180 DSAVG-FFKRMPECD----SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAY 234
D A+ ++ M + D + + LI GL ++G L A L E G D G Y
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL-YEAKQLFE-GMLDYGCRPNCAIY 929
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N LI G+G++G+ + A LF R+ + R ++ +++ ++ C VG +
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEG---------VRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 295 RELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIIS 345
F + E D +N +I+G + +EEA LF EM + PD ++NS+I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 346 GFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKP 401
G ++ A + + + N+ ++N+LI GY + + A ++ M G P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 402 DRHT 405
+ T
Sbjct: 1101 NTGT 1104
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 135/303 (44%), Gaps = 31/303 (10%)
Query: 305 DTCAWNTMISGYVQISDMEEASKLF----KEMPSPDALSWNSIISGFAQIGDLKVAKDFF 360
+TC N M+ +EE + +F K + D ++ +I + G LK A
Sbjct: 119 ETC--NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 361 ERMPQ----KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
+M + N S+N LI K+ A+E++ +M LEG +P T SS++ GL
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM---VGL 233
Query: 417 -----VDLYLG--KQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FY 466
+D +G K+M L K P++ I + R G I EA + M
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLK---PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG 290
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
DV+T+ +I + A E+F++MK + P +T+I++L+ + ++ ++
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM---PVKPDKAVWGALL-GSC 582
++ M D G P V F VD L + G EA D ++ M + P+ + L+ G
Sbjct: 351 WSEMEKD-GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 583 RVH 585
RVH
Sbjct: 410 RVH 412
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 128/568 (22%), Positives = 254/568 (44%), Gaps = 56/568 (9%)
Query: 68 VTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKL 123
VT+NT++ + K+ A +L D M + D+ ++N++I C S + +G L
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIH---DLCRSNRIAKGYLL 325
Query: 124 FDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVITGFLL 175
+M +R + V++NT+I+G++ G++ A +L + M N V+ NA+I G +
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 176 NGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
G+ A+ F M S L+ GL +N E D+A G + +
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI- 444
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDI 291
Y +I G ++G ++EA L + + D D ++V++++++ + KVG
Sbjct: 445 -TYTGMIDGLCKNGFLDEAVVLLNEMSKDGID---------PDIVTYSALINGFCKVGRF 494
Query: 292 VSARELFDSMGE----RDTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSI 343
+A+E+ + + ++T+I ++ ++EA ++++ M + D ++N +
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 344 ISGFAQIGDLKVAKDFFERMPQ----KNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
++ + G + A++F M N +S++ LI GY + + A +F +M G
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 400 KPDRHTLSSVLS-VCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACT 458
P T S+L +C G K + L D + N+L+T + G + +A +
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVS 674
Query: 459 VFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMK-RLKIHPTYITFISVLNAC 514
+F EM D T+ ++I G G V A+ K+ + R + P + + ++
Sbjct: 675 LFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGM 734
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK---PD 571
AG + G F +++ G P + + +D R G++++ DL+ M + P+
Sbjct: 735 FKAGQWKAG-IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPN 793
Query: 572 KAVWGALLGSCRVHGNVELAQVAAQALI 599
+ LL HG + V+ L+
Sbjct: 794 LTTYNILL-----HGYSKRKDVSTSFLL 816
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 142/648 (21%), Positives = 263/648 (40%), Gaps = 119/648 (18%)
Query: 22 LASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGH 77
+ ++ N N S ++ I +R G + ++ F M + + T N ++
Sbjct: 153 MTTYRLCNSNPSV----YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 208
Query: 78 VKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER--- 130
VK E EM +R D+ ++N++I+ C E+ L +M +
Sbjct: 209 VKSGEDVSVWSFLKEMLKRKICPDVATFNILIN---VLCAEGSFEKSSYLMQKMEKSGYA 265
Query: 131 -DCVSWNTVISGYAKNGRMDQALKLFDAMPER--------------NAVSSNAVITGFLL 175
V++NTV+ Y K GR A++L D M + + SN + G+LL
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 176 NGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMAAGILLE-CGDGDEGKHDLVQAY 234
D+ KRM + + + LI+G G++ +A+ +L E G H +
Sbjct: 326 LRDMR------KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH---VTF 376
Query: 235 NTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA 294
N LI G+ G +EA ++F + + + + VS+ ++ K + A
Sbjct: 377 NALIDGHISEGNFKEALKMFYMM---------EAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 295 RELFDSMGERDTCA----WNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISG 346
R + M C + MI G + ++EA L EM PD ++++++I+G
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 347 FAQIGDLKVAKDFFERMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
F ++G K AK+ R+ + L I +++LI + K AI ++ M LEG D
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 403 RHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNE 462
T N L+T + G + EA
Sbjct: 548 HFTF----------------------------------NVLVTSLCKAGKVAEAEEFMRC 573
Query: 463 MK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGL 519
M + ++++ +I GY + G + A +F +M ++ HPT+ T+ S+L G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 520 VEEGRRQFNSMINDYGIEPRVE--HFASFVDILGRQGQLQEAMDLINSM---PVKPDKAV 574
+ E + S+ + + V+ + + + + + G L +A+ L M + PD
Sbjct: 634 LREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 690
Query: 575 WGALL-GSCRVHGNVELAQVAAQALISLEPESSG---PYVLLYNMYAN 618
+ +L+ G CR G +A + A+ E E+ G P ++Y + +
Sbjct: 691 YTSLISGLCR-KGKTVIAILFAK-----EAEARGNVLPNKVMYTCFVD 732
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 143/637 (22%), Positives = 253/637 (39%), Gaps = 132/637 (20%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I L R+ R+++ M+ H N VT+NTLI+G ++ A QL +EM
Sbjct: 306 YNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEML 365
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
F P V++N +I G+ G +ALK+
Sbjct: 366 S----------------------------FGLSPNH--VTFNALIDGHISEGNFKEALKM 395
Query: 155 FDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVR 206
F M + + VS ++ G N + D A GF+ RM + + +I GL +
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI------PND 260
NG LD A +L E +G + Y+ LI G+ + G+ + A+ + RI PN
Sbjct: 456 NGFLDEAVVLLNEM--SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 261 ------------QGDGKEDGRRFR--------RNVVSWNSMMMCYVKVGDIVSARELFDS 300
G KE R + R+ ++N ++ K G + A E
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 573
Query: 301 MGE----RDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGD 352
M +T +++ +I+GY + +A +F EM P ++ S++ G + G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 353 LKVAKDFFERM----PQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
L+ A+ F + + + + +N+L+ K+ + A+ LF +M PD +T +S
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 409 VLS-VC----------------------------TGLVD-----------LYLGKQMHQL 428
++S +C T VD +Y +QM L
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNL 753
Query: 429 VTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK---DVITWNAMIGGYASHGLA 485
PD+ N++I YSR G I + + EM ++ T+N ++ GY+
Sbjct: 754 GHT---PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Query: 486 VDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFAS 545
+ L++ + I P +T S++ + ++E G + + I G+E F
Sbjct: 811 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR-GVEVDRYTFNM 869
Query: 546 FVDILGRQGQLQEAMDLI---NSMPVKPDKAVWGALL 579
+ G++ A DL+ S+ + DK A++
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 146/645 (22%), Positives = 285/645 (44%), Gaps = 83/645 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSM----KHRNTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ I + R G L EA +++M R+ T+N L++ K ++A+A + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 95 QRDI----VSWNLIISGYFSCCGSKFVEEGRK---LFDEMPE----RDCVSWNTVISGYA 143
I VS++ +I+GY + EG K +FDEM + ++ +++ G
Sbjct: 576 SDGILPNTVSFDCLINGYGNS------GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 144 KNGRMDQA---LKLFDAMPER-NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSA 195
K G + +A LK A+P + V N ++T +G++ AV F M + DS
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQ---AYNTLIAGYGQSGKVEEARR 252
+ ++LISGL R G+ +A E E + +++ Y + G ++G+ +
Sbjct: 690 TYTSLISGLCRKGKTVIAILFAKEA----EARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745
Query: 253 LFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERD----TCA 308
+++ D ++V+ N+M+ Y ++G I +L MG ++
Sbjct: 746 FREQM---------DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTT 796
Query: 309 WNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQ-----IGDLKVAKDF 359
+N ++ GY + D+ + L++ + PD L+ +S++ G + IG LK+ K F
Sbjct: 797 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG-LKILKAF 855
Query: 360 FERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL 419
R + + ++N LI+ N + A +L M G D+ T +++SV
Sbjct: 856 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 915
Query: 420 YLGKQ-MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDV---ITWNAM 475
+ +H++ + + P+ LI R G I A V EM +K + +AM
Sbjct: 916 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAM 975
Query: 476 IGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYG 535
+ A G A +A L + M ++K+ PT +F ++++ C G V E + ++++ G
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA-LELRVVMSNCG 1034
Query: 536 IEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAA 595
++ + + + L +G + A +L M K D + N +
Sbjct: 1035 LKLDLVSYNVLITGLCAKGDMALAFELYEEM--KGDGFL-----------ANATTYKALI 1081
Query: 596 QALISLEPESSGPYVLLYNMYA-----NLELWDDAER-VRVLMEE 634
+ L++ E SG ++L ++ A ++ L D+ R +++ ME+
Sbjct: 1082 RGLLARETAFSGADIILKDLLARGFITSMSLSQDSHRNLKMAMEK 1126
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 142/617 (23%), Positives = 259/617 (41%), Gaps = 103/617 (16%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKR-REIAKARQLF 90
++ + IS +GR EA F M+ +T+N +++ K K L
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 91 DEMPQRDIVSWNLIISGYFSCCG-SKFVEEGRKLFDEMP----ERDCVSWNTVISGYAKN 145
++M I + +CC +E ++F+EM D V++N ++ Y K+
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 146 GRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASL 197
R +A+K+ + M + V+ N++I+ + +G +D A+ +M E D +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ L+SG R G+++ A I E + G + +N I YG GK E ++FD I
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNA--GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG------ERDTCAWNT 311
N G ++V+WN+++ + + G +F M ER+T +NT
Sbjct: 446 -NVCG--------LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET--FNT 494
Query: 312 MISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMP--- 364
+IS Y + E+A +++ M +PD ++N++++ A+ G + ++ M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 365 -QKNLISWNSLIAGYDKNED-----------YKGAIE----------------------- 389
+ N +++ SL+ Y ++ Y G IE
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 390 -LFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM--------HQLVTKTVIPDLPIN 440
FS+++ G PD TL+S++S+ Y +QM + + P +
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSI-------YGRRQMVAKANGVLDYMKERGFTPSMATY 667
Query: 441 NSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
NSL+ M+SR G++ + E+ D+I++N +I Y + DA +F +M+
Sbjct: 668 NSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
I P IT+ + + + A + EE MI +G P + S VD + +
Sbjct: 728 SGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKD 786
Query: 558 EAM----DLINSMPVKP 570
EA DL N P P
Sbjct: 787 EAKLFVEDLRNLDPHAP 803
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 135/570 (23%), Positives = 261/570 (45%), Gaps = 71/570 (12%)
Query: 94 PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALK 153
PQ V +LI + S + E + F + PE + G + + D AL+
Sbjct: 97 PQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALR 156
Query: 154 LFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDMA 213
FD F+ D S + D++ ++ +IS L + G + A
Sbjct: 157 AFD---------------WFMKQKDYQSML---------DNSVVAIIISMLGKEGRVSSA 192
Query: 214 AGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRR 273
A + G ++G V +Y +LI+ + SG+ EA +F ++ +EDG +
Sbjct: 193 ANMF--NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM-------EEDG--CKP 241
Query: 274 NVVSWNSMMMCYVKVG----DIVSARELFDSMG-ERDTCAWNTMISGYVQISDMEEASKL 328
++++N ++ + K+G I S E S G D +NT+I+ + S +EA+++
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQV 301
Query: 329 FKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDK 380
F+EM S D +++N+++ + + K A M +++++NSLI+ Y +
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVC--TGLVD--LYLGKQMHQLVTKTVIPD 436
+ A+EL +QM +G KPD T +++LS G V+ + + ++M K P+
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK---PN 418
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFK 493
+ N+ I MY G E +F+E+ D++TWN ++ + +G+ + +FK
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 494 QMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQ 553
+MKR P TF ++++A + G E+ + M+ D G+ P + + + + L R
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARG 537
Query: 554 GQLQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALIS--LEPESSGP 608
G +++ ++ M KP++ + +LL + + L A+ + S +EP +
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA--- 594
Query: 609 YVLLYNMY---ANLELWDDAERVRVLMEEK 635
VLL + + +L +AER ++E+
Sbjct: 595 -VLLKTLVLVCSKCDLLPEAERAFSELKER 623
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 226/522 (43%), Gaps = 59/522 (11%)
Query: 135 WNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
+ T+I G+AK GR+D AL L D M + + V N I F G VD A FF +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 191 ----ECDSASLSALISGLVRNGELDMAAGIL--LECGDGDEGKHDLVQAYNTLIAGYGQS 244
+ D + +++I L + LD A + LE + AYNT+I GYG +
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE----KNRRVPCTYAYNTMIMGYGSA 321
Query: 245 GKVEEARRLFDR------IPN------------DQGDGKEDGRRFRR-------NVVSWN 279
GK +EA L +R IP+ G E + F N+ ++N
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYN 381
Query: 280 SMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP-- 333
++ + G + +A EL DSM + + N M+ + ++EA +F+EM
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 334 --SPDALSWNSIISGFAQIGDLKVAKDFFERM----PQKNLISWNSLIAGYDKNEDYKGA 387
+PD +++ S+I G ++G + A +E+M + N I + SLI + + +
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 388 IELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM-HQLVTKTVIPDLPINNSLITM 446
+++ M + PD L++ + + G+ M ++ + +PD + LI
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 447 YSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPT 503
+ G E +F MK D +N +I G+ G A +L ++MK PT
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 504 YITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI 563
+T+ SV++ A ++E F IE V ++S +D G+ G++ EA ++
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 564 NSMPVK---PDKAVWGALLGSCRVHGNVELAQVAAQALISLE 602
+ K P+ W +LL + + A V Q++ L+
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 133/624 (21%), Positives = 261/624 (41%), Gaps = 102/624 (16%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFD 91
+H + I + GR+ A + D MK + V +N I K ++ A + F
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----SWNTVISGYA 143
E+ + D V++ +I C + ++E ++F+ + + V ++NT+I GY
Sbjct: 263 EIEANGLKPDEVTYTSMIG---VLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 144 KNGRMDQALKLFDAMPERNAVSS----NAVITGFLLNGDVDSAVGFFKRMPECDSASLSA 199
G+ D+A L + + ++ S N ++T G VD A+ F+ M + + +LS
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST 379
Query: 200 ---LISGLVRNGELDMA---------AGILLE--------------------CGDGDEGK 227
LI L R G+LD A AG+ C +E
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 228 HDLVQ----AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMM 283
+ + + +LI G G+ G+V++A ++++++ + R N + + S++
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC---------RTNSIVYTSLIK 490
Query: 284 CYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----P 335
+ G +++ M + D NT + + + E+ +F+E+ + P
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELF 391
DA S++ +I G + G + F M ++ + ++N +I G+ K A +L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 392 SQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV----TKTVIPDLPINNSLITMY 447
+M+ +G +P T SV+ GL + + + L +K + ++ I +SLI +
Sbjct: 611 EEMKTKGFEPTVVTYGSVID---GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 448 SRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTY 504
+ G I EA + E+ ++ TWN+++ +AL F+ MK LK P
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSM------INDYGIEPRVEHFASFVDILGRQGQLQE 558
+T+ ++N R+FN + G++P + + + L + G + E
Sbjct: 728 VTYGILINGLCKV-------RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 559 AMDLINSMPVK---PDKAVWGALL 579
A L + PD A + A++
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMI 804
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 137/563 (24%), Positives = 242/563 (42%), Gaps = 107/563 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSM-KHRN---TVTWNTLISGHVKRREIAKARQLFDEMP 94
+ I L + RL EA F+ + K+R T +NT+I G+ + +A L +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 95 QR----DIVSWNLIISGYFSCCGSKF--VEEGRKLFDEMPER---DCVSWNTVISGYAKN 145
+ ++++N I++ C K V+E K+F+EM + + ++N +I +
Sbjct: 336 AKGSIPSVIAYNCILT-----CLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRA 390
Query: 146 GRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM--PEC--DSASL 197
G++D A +L D+M + N + N ++ + +D A F+ M C D +
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+LI GL + G +D A + + D D + +V Y +LI + G+ E+ +++ +
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV--YTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 258 PND-----------------QGDGKEDGR---------RFRRNVVSWNSMMMCYVKVGDI 291
N + E GR RF + S++ ++ +K G
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 292 VSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSI 343
ELF SM E+ DT A+N +I G+ + + +A +L +EM + P +++ S+
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 344 ISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
I G A+I L A FE K N++ ++SLI G+ K A + ++ +G
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 400 KPDRHTLSSVL-------SVCTGLVDLYLGKQM----HQLVTKTVIPDL----------- 437
P+ +T +S+L + LV K++ +Q+ +I L
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFV 748
Query: 438 -----------PINNSLITMYS---RCGAIGEACTVFNEMKF---YKDVITWNAMIGGYA 480
P S TM S + G I EA +F+ K D +NAMI G +
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 481 SHGLAVDALELFKQMKR--LKIH 501
+ A+DA LF++ +R L IH
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIH 831
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 169/380 (44%), Gaps = 29/380 (7%)
Query: 226 GKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCY 285
G V + TLI G+ + G+V+ A L D + + D ++V +N + +
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA---------DIVLYNVCIDSF 248
Query: 286 VKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDA 337
KVG + A + F + + D + +MI + + ++EA ++F+ + P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 338 LSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQ 393
++N++I G+ G A ER K ++I++N ++ K A+++F +
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368
Query: 394 MQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGA 452
M+ + P+ T + ++ + L ++ + K + P++ N ++ +
Sbjct: 369 MKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
Query: 453 IGEACTVFNEMKF---YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFIS 509
+ EAC +F EM + D IT+ ++I G G DA +++++M I + S
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 510 VLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK 569
++ + G E+G + + MIN P ++ +++D + + G+ ++ + +K
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE--IK 544
Query: 570 PDKAVWGALLGSCRVHGNVE 589
+ V A S +HG ++
Sbjct: 545 ARRFVPDARSYSILIHGLIK 564
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFD 91
L+ WN + L++ ++EA F SMK N VT+ LI+G K R+ KA +
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 92 EMPQRDI----VSWNLIISGYFSCCGSKFVEEGRKLFDE------MPERDCVSWNTVISG 141
EM ++ + +S+ +ISG + G+ + E LFD +P+ C +N +I G
Sbjct: 752 EMQKQGMKPSTISYTTMISG-LAKAGN--IAEAGALFDRFKANGGVPDSAC--YNAMIEG 806
Query: 142 YAKNGRMDQALKLFDAMPER 161
+ R A LF+ R
Sbjct: 807 LSNGNRAMDAFSLFEETRRR 826
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 209/467 (44%), Gaps = 41/467 (8%)
Query: 146 GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD-----SAVGFFKRMPEC----DSAS 196
G + +A ++F+ M V S +L D +A+ F+ PE + AS
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 197 LSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR 256
+ +I + + G + A +LL +G V +Y+T++ GY + G++++ +L +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 257 IPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTM 312
+ K G + N + S++ ++ + A E F M + DT + T+
Sbjct: 307 M-------KRKG--LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 313 ISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
I G+ + D+ ASK F EM S PD L++ +IISGF QIGD+ A F M K L
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 369 ----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
+++ LI GY K K A + + M G P+ T ++++ DL +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 425 M-HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYA 480
+ H++ + P++ NS++ + G I EA + E + D +T+ ++ Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRV 540
G A E+ K+M + PT +TF ++N G++E+G + N M+ GI P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNA 596
Query: 541 EHFASFVDILGRQGQLQEAMDLINSM---PVKPDKAVWGALL-GSCR 583
F S V + L+ A + M V PD + L+ G C+
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 194/396 (48%), Gaps = 46/396 (11%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
I L R +L+EA F M + +TV + TLI G KR +I A + F EM RDI
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 99 ----VSWNLIISGYFSCCGSKFVEEGRKLFDEM----PERDCVSWNTVISGYAKNGRMDQ 150
+++ IISG+ C VE G KLF EM E D V++ +I+GY K G M
Sbjct: 383 TPDVLTYTAIISGF--CQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 151 ALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALIS 202
A ++ + M + N V+ +I G GD+DSA M + + + +++++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
GL ++G ++ A ++ E G + Y TL+ Y +SG++++A+ + +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAA--GLNADTVTYTTLMDAYCKSGEMDKAQEILKEML---- 553
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQ 318
G+ + +V++N +M + G + +L + M + + +N+++ Y
Sbjct: 554 -----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 319 ISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLIS 370
++++ A+ ++K+M S PD ++ +++ G + ++K A F+ M K ++ +
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
++ LI G+ K + + A E+F QM+ EG D+
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 231/552 (41%), Gaps = 104/552 (18%)
Query: 46 LIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKR-----REIAKARQLFDEMPQR---- 96
L+ G L EAR F+ M + V + ++ R + A A +F E P+
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQAL 152
++ S+N++I +F C + ++E L M + D +S++TV++GY + G +D+
Sbjct: 245 NVASYNIVI--HFVCQLGR-IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
KL + M +R + N+ I G S +G R+ C A S ++R G L
Sbjct: 302 KLIEVM-KRKGLKPNSYIYG--------SIIGLLCRI--CKLAEAEEAFSEMIRQGILP- 349
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
D V Y TLI G+ + G + A + F + R
Sbjct: 350 ----------------DTV-VYTTLIDGFCKRGDIRAASKFFYEM---------HSRDIT 383
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL 328
+V+++ +++ + ++GD+V A +LF M E D+ + +I+GY + M++A ++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 329 FKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERM----PQKNLISWNSLIAGYDK 380
M SP+ +++ ++I G + GDL A + M Q N+ ++NS++ G K
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPIN 440
+ + + A++L + + G D T +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYT--------------------------------- 530
Query: 441 NSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
+L+ Y + G + +A + EM ++T+N ++ G+ HG+ D +L M
Sbjct: 531 -TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
I P TF S++ ++ + M + G+ P + + + V + ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMK 648
Query: 558 EAMDLINSMPVK 569
EA L M K
Sbjct: 649 EAWFLFQEMKGK 660
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 211/494 (42%), Gaps = 83/494 (16%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I + + GR+ EA M+ + + ++++T+++G+ + E+ K +L + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 95 QRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMD 149
++ + + I C + E + F EM + D V + T+I G+ K G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 150 QALKLFDAMPERN----AVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALI 201
A K F M R+ ++ A+I+GF GD+ A F M E DS + + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 202 SGLVRNGELDMAAGI---LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+G + G + A + +++ G V Y TLI G + G ++ A L +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPN-----VVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL---FDSMG-ERDTCAWNTMIS 314
+ N+ ++NS++ K G+I A +L F++ G DT + T++
Sbjct: 484 KIG---------LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 315 GYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQK---- 366
Y + +M++A ++ KEM P +++N +++GF G L+ + M K
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
N ++NSL+ Y + K A ++ M G PD T +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN------------------ 636
Query: 427 QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHG 483
L+ + + + EA +F EMK F V T++ +I G+
Sbjct: 637 ----------------LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 484 LAVDALELFKQMKR 497
++A E+F QM+R
Sbjct: 681 KFLEAREVFDQMRR 694
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 16/279 (5%)
Query: 328 LFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYD 379
+F+E P + S+N +I Q+G +K A M K ++IS+++++ GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 380 KNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ-MHQLVTKTVIPDLP 438
+ + +L M+ +G KP+ + S++ + + L ++ +++ + ++PD
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 439 INNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQM 495
+ +LI + + G I A F EM DV+T+ A+I G+ G V+A +LF +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
+ P +TF ++N AG +++ R N MI G P V + + +D L ++G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGD 471
Query: 556 LQEAMDLINSM---PVKPDKAVWGALLGSCRVHGNVELA 591
L A +L++ M ++P+ + +++ GN+E A
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 209/467 (44%), Gaps = 41/467 (8%)
Query: 146 GRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD-----SAVGFFKRMPEC----DSAS 196
G + +A ++F+ M V S +L D +A+ F+ PE + AS
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 197 LSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR 256
+ +I + + G + A +LL +G V +Y+T++ GY + G++++ +L +
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMEL--KGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 257 IPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTM 312
+ K G + N + S++ ++ + A E F M + DT + T+
Sbjct: 307 M-------KRKG--LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 313 ISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL 368
I G+ + D+ ASK F EM S PD L++ +IISGF QIGD+ A F M K L
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 369 ----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ 424
+++ LI GY K K A + + M G P+ T ++++ DL +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 425 M-HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYA 480
+ H++ + P++ NS++ + G I EA + E + D +T+ ++ Y
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 481 SHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRV 540
G A E+ K+M + PT +TF ++N G++E+G + N M+ GI P
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNA 596
Query: 541 EHFASFVDILGRQGQLQEAMDLINSM---PVKPDKAVWGALL-GSCR 583
F S V + L+ A + M V PD + L+ G C+
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 194/396 (48%), Gaps = 46/396 (11%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQRDI 98
I L R +L+EA F M + +TV + TLI G KR +I A + F EM RDI
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 99 ----VSWNLIISGYFSCCGSKFVEEGRKLFDEM----PERDCVSWNTVISGYAKNGRMDQ 150
+++ IISG+ C VE G KLF EM E D V++ +I+GY K G M
Sbjct: 383 TPDVLTYTAIISGF--CQIGDMVEAG-KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 151 ALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALIS 202
A ++ + M + N V+ +I G GD+DSA M + + + +++++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
GL ++G ++ A ++ E G + Y TL+ Y +SG++++A+ + +
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAA--GLNADTVTYTTLMDAYCKSGEMDKAQEILKEML---- 553
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQ 318
G+ + +V++N +M + G + +L + M + + +N+++ Y
Sbjct: 554 -----GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 319 ISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLIS 370
++++ A+ ++K+M S PD ++ +++ G + ++K A F+ M K ++ +
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668
Query: 371 WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTL 406
++ LI G+ K + + A E+F QM+ EG D+
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/552 (22%), Positives = 231/552 (41%), Gaps = 104/552 (18%)
Query: 46 LIRTGRLSEARTFFDSMKHRNTVTWNTLISGHVKR-----REIAKARQLFDEMPQR---- 96
L+ G L EAR F+ M + V + ++ R + A A +F E P+
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 97 DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMDQAL 152
++ S+N++I +F C + ++E L M + D +S++TV++GY + G +D+
Sbjct: 245 NVASYNIVI--HFVCQLGR-IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRNGELDM 212
KL + M +R + N+ I G S +G R+ C A S ++R G L
Sbjct: 302 KLIEVM-KRKGLKPNSYIYG--------SIIGLLCRI--CKLAEAEEAFSEMIRQGILP- 349
Query: 213 AAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFR 272
D V Y TLI G+ + G + A + F + R
Sbjct: 350 ----------------DTV-VYTTLIDGFCKRGDIRAASKFFYEM---------HSRDIT 383
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISGYVQISDMEEASKL 328
+V+++ +++ + ++GD+V A +LF M E D+ + +I+GY + M++A ++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 329 FKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERM----PQKNLISWNSLIAGYDK 380
M SP+ +++ ++I G + GDL A + M Q N+ ++NS++ G K
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 381 NEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPIN 440
+ + + A++L + + G D T +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYT--------------------------------- 530
Query: 441 NSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
+L+ Y + G + +A + EM ++T+N ++ G+ HG+ D +L M
Sbjct: 531 -TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
I P TF S++ ++ + M + G+ P + + + V + ++
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMK 648
Query: 558 EAMDLINSMPVK 569
EA L M K
Sbjct: 649 EAWFLFQEMKGK 660
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 211/494 (42%), Gaps = 83/494 (16%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I + + GR+ EA M+ + + ++++T+++G+ + E+ K +L + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 95 QRDIVSWNLIISGYFSC-CGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGRMD 149
++ + + I C + E + F EM + D V + T+I G+ K G +
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 150 QALKLFDAMPERN----AVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSALI 201
A K F M R+ ++ A+I+GF GD+ A F M E DS + + LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 202 SGLVRNGELDMAAGI---LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+G + G + A + +++ G V Y TLI G + G ++ A L +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPN-----VVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAREL---FDSMG-ERDTCAWNTMIS 314
+ N+ ++NS++ K G+I A +L F++ G DT + T++
Sbjct: 484 KIG---------LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 315 GYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQK---- 366
Y + +M++A ++ KEM P +++N +++GF G L+ + M K
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMH 426
N ++NSL+ Y + K A ++ M G PD T +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN------------------ 636
Query: 427 QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHG 483
L+ + + + EA +F EMK F V T++ +I G+
Sbjct: 637 ----------------LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 484 LAVDALELFKQMKR 497
++A E+F QM+R
Sbjct: 681 KFLEAREVFDQMRR 694
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 137/279 (49%), Gaps = 16/279 (5%)
Query: 328 LFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYD 379
+F+E P + S+N +I Q+G +K A M K ++IS+++++ GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 380 KNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ-MHQLVTKTVIPDLP 438
+ + +L M+ +G KP+ + S++ + + L ++ +++ + ++PD
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 439 INNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQM 495
+ +LI + + G I A F EM DV+T+ A+I G+ G V+A +LF +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
+ P +TF ++N AG +++ R N MI G P V + + +D L ++G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGD 471
Query: 556 LQEAMDLINSM---PVKPDKAVWGALLGSCRVHGNVELA 591
L A +L++ M ++P+ + +++ GN+E A
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 250/539 (46%), Gaps = 61/539 (11%)
Query: 66 NTVTWNTLISGHVKRRE---IAKARQLFDEMPQ----RDIVSWNLIISGYFSCCGSKFVE 118
N +T NTL+ G V+ I+ AR++FD+M + ++ ++N++++GY C +E
Sbjct: 165 NLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGY---CLEGKLE 221
Query: 119 EGRKLFDEMPER-----DCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAV 169
+ + + M D V++NT++ +K GR+ +L M + N V+ N +
Sbjct: 222 DALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNL 281
Query: 170 ITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGI-LLECGDGD 224
+ G+ G + A + M + D + + LI+GL G M G+ L++
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG--SMREGLELMDAMKSL 339
Query: 225 EGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMM-- 282
+ + D+V YNTLI G + G EAR+L +++ ND + N V+ N +
Sbjct: 340 KLQPDVV-TYNTLIDGCFELGLSLEARKLMEQMENDG---------VKANQVTHNISLKW 389
Query: 283 MCYVKVGDIVS--ARELFDSMG-ERDTCAWNTMISGYVQISDMEEASKLFKEMPSP---- 335
+C + + V+ +EL D G D ++T+I Y+++ D+ A ++ +EM
Sbjct: 390 LCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKM 449
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELF 391
+ ++ N+I+ + L A + ++ I ++ +LI G+ + E + A+E++
Sbjct: 450 NTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 392 SQMQLEGEKPDRHTLSSVLS-VCT-GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSR 449
+M+ P T +S++ +C G +L + K +L ++PD NS+I Y +
Sbjct: 510 DEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK-FDELAESGLLPDDSTFNSIILGYCK 568
Query: 450 CGAIGEACTVFNE---MKFYKDVITWNAMIGGYASHGLAVDALELFKQM--KRLKIHPTY 504
G + +A +NE F D T N ++ G G+ AL F + +R TY
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTY 628
Query: 505 ITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLI 563
T IS C L E S + + G+EP + SF+ +L G+L E +L+
Sbjct: 629 NTMISAF--CKDKKLKE--AYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 210/466 (45%), Gaps = 92/466 (19%)
Query: 17 LCSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNT 72
+ R ++ F DN + +N + + + GRLS+ + MK N VT+N
Sbjct: 226 MLERMVSEFKVNPDNVT-----YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNN 280
Query: 73 LISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP 128
L+ G+ K + +A Q+ + M Q D+ ++N++I+G C + + EG +L D M
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL---CNAGSMREGLELMDAMK 337
Query: 129 ----ERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAV--------------- 169
+ D V++NT+I G + G +A KL + M E + V +N V
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM-ENDGVKANQVTHNISLKWLCKEEKR 396
Query: 170 --------------------------ITGFLLNGDVDSAVGFFKRMPE----CDSASLSA 199
I +L GD+ A+ + M + ++ +L+
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 200 LISGLVRNGELDMAAGILLECGDGDEGKHDLVQ--AYNTLIAGYGQSGKVEEARRLFDRI 257
++ L + +LD A +L + + +V Y TLI G+ + KVE+A ++D +
Sbjct: 457 ILDALCKERKLDEAHNLL----NSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
+ V ++NS++ G A E FD + E D +N++I
Sbjct: 513 KK---------VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 314 SGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK--- 366
GY + +E+A + + E PD + N +++G + G + A +FF + ++
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV 623
Query: 367 NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ +++N++I+ + K++ K A +L S+M+ +G +PDR T +S +S+
Sbjct: 624 DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISL 669
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 214/481 (44%), Gaps = 43/481 (8%)
Query: 135 WNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLL---NGDVDSAVGFFK 187
++ +S Y G+ AL++F M + N ++ N ++ G + + + SA F
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 188 RMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQ 243
M + + + + L++G G+L+ A G+L + D V YNT++ +
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV-TYNTILKAMSK 252
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
G++ + + L D K++G N V++N+++ Y K+G + A ++ + M +
Sbjct: 253 KGRLSDLKELL-------LDMKKNG--LVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 304 R----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKV 355
D C +N +I+G M E +L M S PD +++N++I G ++G
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 356 AKDFFERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQM-QLEGEKPDRHTLSSVL 410
A+ E+M + N ++ N + K E + ++ + G PD T +++
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 411 SVCTGLVDLYLG-KQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FY 466
+ DL + M ++ K + + N+++ + + EA + N F
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 467 KDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQ 526
D +T+ +I G+ ALE++ +MK++KI PT TF S++ H G E +
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 527 FNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLIN---SMPVKPDKAVWGALL-GSC 582
F+ + + G+ P F S + ++G++++A + N KPD LL G C
Sbjct: 544 FDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 583 R 583
+
Sbjct: 603 K 603
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 24/247 (9%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
N + L + +L EA +S R + VT+ TLI G + ++ KA +++DEM +
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 96 RDIV----SWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGR 147
I ++N +I G C E + FDE+ E D ++N++I GY K GR
Sbjct: 515 VKITPTVSTFNSLIGGL---CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGR 571
Query: 148 MDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM---PECDSASLSAL 200
+++A + ++ + + + N ++ G G + A+ FF + E D+ + + +
Sbjct: 572 VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTM 631
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND 260
IS ++ +L A +L E + +G YN+ I+ + GK+ E L +
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEE--KGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Query: 261 QGDGKED 267
G K D
Sbjct: 690 FGSMKRD 696
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 204/429 (47%), Gaps = 35/429 (8%)
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
++ YNTL+ + G V+E ++++ + D + N+ ++N M+ Y K+G
Sbjct: 182 IIGCYNTLLNSLARFGLVDEMKQVYMEMLED---------KVCPNIYTYNKMVNGYCKLG 232
Query: 290 DIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWN 341
++ A + + E D + ++I GY Q D++ A K+F EMP + +++
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 342 SIISGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLE 397
+I G + A D F +M ++ LI +E A+ L +M+
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 398 GEKPDRHTLSSVL-SVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEA 456
G KP+ HT + ++ S+C+ + + Q++ K ++P++ N+LI Y + G I +A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 457 CTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNA 513
V M K + T+N +I GY + A+ + +M K+ P +T+ S+++
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 514 CAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKP 570
+G + R S++ND G+ P + S +D L + +++EA DL +S+ V P
Sbjct: 472 QCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 571 DKAVWGALL-GSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVR 629
+ ++ AL+ G C+ G V+ A + + ++S ++ P L +N + D +
Sbjct: 531 NVVMYTALIDGYCKA-GKVDEAHLMLEKMLS---KNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 630 VLMEEKNVK 638
L+EEK VK
Sbjct: 587 TLLEEKMVK 595
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 138/647 (21%), Positives = 282/647 (43%), Gaps = 88/647 (13%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFD 91
++ +NK ++ + G + EA + + + T+ +LI G+ +R+++ A ++F+
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----SWNTVISGYA 143
EMP +R+ V++ +I G C ++ ++E LF +M + +C ++ +I
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGL---CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 144 KNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSA 195
+ R +AL L M E N + +I + A +M E +
Sbjct: 335 GSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVI 394
Query: 196 SLSALISGLVRNGELDMAAGI--LLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRL 253
+ +ALI+G + G ++ A + L+E + YN LI GY +S V +A +
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPN----TRTYNELIKGYCKSN-VHKAMGV 449
Query: 254 FDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAW 309
+++ R+ +VV++NS++ + G+ SA L M +R D +
Sbjct: 450 LNKMLE---------RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 310 NTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQ 365
+MI + +EEA LF + +P+ + + ++I G+ + G + A E+M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 366 KNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL-Y 420
KN + ++N+LI G + K A L +M G +P T + ++ D +
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 620
Query: 421 LGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIG 477
+ Q+++ PD + I Y R G + +A + +M+ D+ T++++I
Sbjct: 621 AYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIK 680
Query: 478 GYASHGLAVDALELFKQMKRLKIHPTYITFISVLN----------------ACAHAGLVE 521
GY G A ++ K+M+ P+ TF+S++ CA + ++E
Sbjct: 681 GYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMME 740
Query: 522 EGRRQFNSMIN------DYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP----VKPD 571
F++++ ++ + P + + + + G L+ A + + M + P
Sbjct: 741 -----FDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 572 KAVWGALLG-SCRVHGNVELAQVAAQAL-ISLEPESSGPYVLLYNMY 616
+ V+ ALL C++ + E A+V + + P+ VL+ +Y
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 202/487 (41%), Gaps = 85/487 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNTV----TWNTLISGHVKRREIAKARQLFDEMP 94
+N I R+G A M R V T+ ++I K + + +A LFD +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCV----SWNTVISGYAKNG 146
Q+ ++V + +I GY C + V+E + ++M ++C+ ++N +I G +G
Sbjct: 525 QKGVNPNVVMYTALIDGY---CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 147 RMDQALKLFDAMPE---RNAVSSNAVITGFLL-NGDVDSAVGFFKRM----PECDSASLS 198
++ +A L + M + + VS++ ++ LL +GD D A F++M + D+ + +
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 199 ALISGLVRNGEL----DMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
I R G L DM A + + G + Y++LI GYG G+ A F
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKM------RENGVSPDLFTYSSLIKGYGDLGQTNFA---F 692
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMIS 314
D + + G E + +++ + + M Y K E + CA + M+
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIK-HLLEMKYGK-----------QKGSEPELCAMSNMME 740
Query: 315 GYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL 374
+ +E K+ + +P+A S+ +I G ++G+L+VA+ F+ M Q+N
Sbjct: 741 FDTVVELLE---KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM-QRN------- 789
Query: 375 IAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDL-YLGKQMHQLVTKTV 433
EG P +++LS C L K + ++
Sbjct: 790 ----------------------EGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 434 IPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALE 490
+P L LI + G +VF + +Y+D + W +I G GL E
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 491 LFKQMKR 497
LF M++
Sbjct: 888 LFNVMEK 894
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 196/419 (46%), Gaps = 61/419 (14%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFD 91
++ +N I+ L + G+L +A+ F M+ VT+NTL+ G R I AR +
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGR--KLFDEMPE----RDCVSWNTVISG 141
EM Q D+ ++N I+S + C EGR ++ EM E D VS+N +I G
Sbjct: 285 EMKSKGFQPDMQTYNPILS--WMC------NEGRASEVLREMKEIGLVPDSVSYNILIRG 336
Query: 142 YAKNGRMDQALKLFDAMPERNAVSS----NAVITGFLLNGDVDSAVGFFKRMPE----CD 193
+ NG ++ A D M ++ V + N +I G + +++A + + E D
Sbjct: 337 CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 194 SASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQ----AYNTLIAGYGQSGKVEE 249
S + + LI+G ++G+ A + DE D +Q Y +LI + K E
Sbjct: 397 SVTYNILINGYCQHGDAKKAFAL------HDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 250 ARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERD 305
A LF+++ G+ + ++V N++M + +G++ A L M D
Sbjct: 451 ADELFEKVV---------GKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 306 TCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFE 361
+N ++ G EEA +L EM PD +S+N++ISG+++ GD K A +
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Query: 362 RMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
M L+++N+L+ G KN++ + A EL +M+ EG P+ + SV+ + L
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 215/479 (44%), Gaps = 50/479 (10%)
Query: 121 RKLFDEM-------PERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAV 169
R LFDE+ + + ++ ++ + +D+A++ F M E+ + N +
Sbjct: 137 RNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHI 196
Query: 170 ITGFLLNGDVDSAVGFFKRMPECDSAS----LSALISGLVRNGELDMAAGIL--LECGDG 223
+T +++A F+ M + S + +I+ L + G+L A G L +E
Sbjct: 197 LTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF-- 254
Query: 224 DEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMM 283
G + YNTL+ G+ G++E AR + + + G + + ++SW M
Sbjct: 255 --GIKPTIVTYNTLVQGFSLRGRIEGARLIISEM---KSKGFQPDMQTYNPILSW----M 305
Query: 284 CYVKVGDIVSARELFDSMGE----RDTCAWNTMISGYVQISDMEEA----SKLFKEMPSP 335
C + A E+ M E D+ ++N +I G D+E A ++ K+ P
Sbjct: 306 C-----NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELF 391
++N++I G ++ A+ + +K ++ ++N LI GY ++ D K A L
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 392 SQMQLEGEKPDRHTLSSVLSV-CTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRC 450
+M +G +P + T +S++ V C + ++V K + PDL + N+L+ +
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 451 GAIGEACTVFNEMKFYK---DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
G + A ++ EM D +T+N ++ G G +A EL +MKR I P +I++
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 508 ISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM 566
++++ + G + + M++ G P + + + + L + + + A +L+ M
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLS-LGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 200/501 (39%), Gaps = 99/501 (19%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFDEMP- 94
N ++ L R R+ A F+ M N T+N +I+ K ++ KA+ M
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 95 ---QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNGR 147
+ IV++N ++ G FS G +E R + EM + D ++N ++S GR
Sbjct: 254 FGIKPTIVTYNTLVQG-FSLRGR--IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR 310
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRN 207
+ L+ M E V DS S + LI G N
Sbjct: 311 ASEVLR---EMKEIGLVP---------------------------DSVSYNILIRGCSNN 340
Query: 208 GELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKED 267
G+L+MA E +G YNTLI G K+E A L I +E
Sbjct: 341 GDLEMAFAYRDEMVK--QGMVPTFYTYNTLIHGLFMENKIEAAEILIREI-------REK 391
Query: 268 GRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEASK 327
G IV D+ +N +I+GY Q D ++A
Sbjct: 392 G----------------------IV-----------LDSVTYNILINGYCQHGDAKKAFA 418
Query: 328 LFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYD 379
L EM + P ++ S+I + + A + FE++ K +L+ N+L+ G+
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 380 KNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQ-MHQLVTKTVIPDLP 438
+ A L +M + PD T + ++ G ++ M ++ + + PD
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 439 INNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
N+LI+ YS+ G A V +EM F ++T+NA++ G + + A EL ++M
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Query: 496 KRLKIHPTYITFISVLNACAH 516
K I P +F SV+ A ++
Sbjct: 599 KSEGIVPNDSSFCSVIEAMSN 619
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 152/364 (41%), Gaps = 57/364 (15%)
Query: 273 RNVVSWNSMMMCYVKVGDIVSARELFDSMGER------DTCAWNTMISGYVQISDMEEAS 326
++ + ++ ++ C ++ + A E F M E+ +TC N +++ +++ +E A
Sbjct: 153 KSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC--NHILTLLSRLNRIENAW 210
Query: 327 KLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGY 378
+ +M + ++N +I+ + G LK AK F M + ++++N+L+ G+
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCT--------------GLV------ 417
+GA + S+M+ +G +PD T + +LS +C GLV
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSY 330
Query: 418 -----------DLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK- 464
DL + ++V + ++P N+LI I A + E++
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 465 --FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEE 522
D +T+N +I GY HG A A L +M I PT T+ S++ E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 523 GRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINS---MPVKPDKAVWGALL 579
F ++ G++P + + +D G + A L+ M + PD + L+
Sbjct: 451 ADELFEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 580 -GSC 582
G C
Sbjct: 510 RGLC 513
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 218/479 (45%), Gaps = 49/479 (10%)
Query: 130 RDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSA--- 182
R+C N V+ + M++A +++ M E ++ N ++ GD++
Sbjct: 204 RNC---NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 183 -VGFFKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV---QAYNTLI 238
+ +R E + + LI+G +NG+++ A GD + ++N LI
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF-----HGDMRRSGFAVTPYSFNPLI 315
Query: 239 AGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF 298
GY + G ++A + D + N ++N + G I AREL
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAG---------IYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 299 DSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLK 354
SM D ++NT++ GY+++ EAS LF ++ + P +++N++I G + G+L+
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 355 VAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD--RHTLSS 408
A+ E M + ++I++ +L+ G+ KN + A E++ +M +G KPD +T +
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 409 VLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK- 467
V + G D + T PDL I N I + G + +A + K ++
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF--QRKIFRV 544
Query: 468 ----DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
D +T+ +I GY +G A L+ +M R +++P+ IT+ ++ A AG +E+
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 524 RRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALL 579
Q+++ + G+ P V + + + + G + EA + M + P+K + L+
Sbjct: 605 -FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 186/436 (42%), Gaps = 76/436 (17%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHRNT----VTWNTLISGHVKRREIAKARQLFDEMP 94
+N + + G L + MK RN VT+N LI+G K ++ +AR+ +M
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 95 QRDIV----SWNLIISGY------------------------------FSCCGSKF--VE 118
+ S+N +I GY + C F ++
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 119 EGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFL 174
+ R+L M D VS+NT++ GY K G+ +A LFD + + V+ N +I G
Sbjct: 361 DARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420
Query: 175 LNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDMAAGI---LLECGDGDEGK 227
+G+++ A + M D + + L+ G V+NG L MA + +L G +G
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG- 479
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
AY T G + G ++A RL + + + + +N + K
Sbjct: 480 ----YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD--------LTIYNVRIDGLCK 527
Query: 288 VGDIVSA----RELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALS 339
VG++V A R++F D + T+I GY++ + A L+ EM P ++
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 340 WNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
+ +I G A+ G L+ A + M ++ N+++ N+L+ G K + A +M+
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 396 LEGEKPDRHTLSSVLS 411
EG P++++ + ++S
Sbjct: 648 EEGIPPNKYSYTMLIS 663
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 177/403 (43%), Gaps = 53/403 (13%)
Query: 37 HQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDE 92
+ +N I + G +A D M + T T+N I I AR+L
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 93 MPQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERD----CVSWNTVISGYAKNGRM 148
M D+VS+N ++ GY KFV E LFD++ D V++NT+I G ++G +
Sbjct: 369 MAAPDVVSYNTLMHGYIKM--GKFV-EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 149 DQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLSAL 200
+ A +L + M + + ++ ++ GF+ NG++ A + M + D + +
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 201 ISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGK----VEEARRLF-- 254
G +R G+ D A + E D DL YN I G + G +E R++F
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLT-IYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWN 310
+P+ V++ +++ Y++ G AR L+D M + +
Sbjct: 545 GLVPDH---------------VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 311 TMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK 366
+I G+ + +E+A + EM P+ ++ N+++ G + G++ A + +M ++
Sbjct: 590 VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE 649
Query: 367 ----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHT 405
N S+ LI+ E ++ ++L+ +M + +PD +T
Sbjct: 650 GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 215/466 (46%), Gaps = 59/466 (12%)
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIV----SWNLIISGYFSCCGSKFVEEGR--- 121
T+N LI + ++ A + ++MP +V ++ ++ GY +EEG
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY--------IEEGDLDG 242
Query: 122 --KLFDEMPERDC----VSWNTVISGYAKNGRMDQALKLFDAMPERNAV-----SSNAVI 170
++ ++M E C VS N ++ G+ K GR++ AL M ++ + N ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 171 TGFLLNGDVDSAVGFFKRMPE----CDSASLSALISGLVRNGELDMAAGILLECGDGDEG 226
G G V A+ M + D + +++ISGL + GE+ A +L + D
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 227 KHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV 286
+ + YNTLI+ + +VEEA L R+ +G +V ++NS++
Sbjct: 363 PNTV--TYNTLISTLCKENQVEEATEL-ARVLTSKG--------ILPDVCTFNSLIQGLC 411
Query: 287 KVGDIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEASKLFKEMP----SPDAL 338
+ A ELF+ M E D +N +I ++EA + K+M + +
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 339 SWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQM 394
++N++I GF + + A++ F+ M +N +++N+LI G K+ + A +L QM
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 395 QLEGEKPDRHTLSSVLS-VCTGLVDLYLGKQMHQLVTKT-VIPDLPINNSLITMYSRCGA 452
+EG+KPD++T +S+L+ C G D+ + Q +T PD+ +LI+ + G
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRG-GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 453 IGEACTVFNEMKFYKDVIT---WNAMIGGYASHGLAVDALELFKQM 495
+ A + ++ +T +N +I G +A+ LF++M
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/509 (20%), Positives = 220/509 (43%), Gaps = 108/509 (21%)
Query: 131 DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV----SSNAVITGFLLNGDVDSAVGFF 186
D ++N +I + ++ A+ + + MP V + V+ G++ GD+D A+
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 187 KRMPE--CDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQS 244
++M E C +++S N ++ G+ +
Sbjct: 248 EQMVEFGCSWSNVSV-----------------------------------NVIVHGFCKE 272
Query: 245 GKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER 304
G+VE+A + N G F + ++N+++ K G + A E+ D M +
Sbjct: 273 GRVEDALNFIQEMSNQDG--------FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 305 ----DTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVA 356
D +N++ISG ++ +++EA ++ +M SP+ +++N++IS + ++ A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 357 KDFFERMPQKNLI----SWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
+ + K ++ ++NSLI G +++ A+ELF +M+ +G +PD T
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY------ 438
Query: 413 CTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKF---YKDV 469
N LI G + EA + +M+ + V
Sbjct: 439 ----------------------------NMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
IT+N +I G+ +A E+F +M+ + +T+ ++++ + VE+ + +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALL-GSCRVH 585
MI + G +P + S + R G +++A D++ +M +PD +G L+ G C+
Sbjct: 531 MIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA- 588
Query: 586 GNVELAQVAAQAL----ISLEPESSGPYV 610
G VE+A +++ I+L P + P +
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 186/426 (43%), Gaps = 82/426 (19%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFD 91
++ +N IS L + G + EA D M R NTVT+NTLIS K ++ +A +L
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 92 EMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYA 143
+ + D+ ++N +I G C ++ +LF+EM + C ++N +I
Sbjct: 390 VLTSKGILPDVCTFNSLIQGL---CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 144 KNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSA 199
G++D+AL + M R+ ++ N +I GF A F M
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME--------- 497
Query: 200 LISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPN 259
+ G+ RN YNTLI G +S +VE+A +L D++
Sbjct: 498 -VHGVSRNS-----------------------VTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 260 DQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMISG 315
+G++ + ++NS++ + + GDI A ++ +M E D + T+ISG
Sbjct: 534 ---EGQKPDK------YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 316 YVQISDMEEASKLFKEMP------SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKN-- 367
+ +E ASKL + + +P A +N +I G + A + F M ++N
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 368 ---LISWNSLIAGY-DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGK 423
+S+ + G + + A++ ++ +G P+ SS+ + GL+ L + +
Sbjct: 643 PPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPE---FSSLYMLAEGLLTLSMEE 699
Query: 424 QMHQLV 429
+ +LV
Sbjct: 700 TLVKLV 705
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 133/332 (40%), Gaps = 25/332 (7%)
Query: 303 ERDTCAWNTMISGYVQISDMEEASKLFKEMP-----SPDALSWNSIISGFAQIGDLKVAK 357
E T + +I Y Q +E + M PD +N +++ LK+ +
Sbjct: 115 EMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVE 174
Query: 358 DFFERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-- 411
+M + ++ ++N LI + + AI + M G PD T ++V+
Sbjct: 175 ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 412 VCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK----FYK 467
+ G +D L + + ++ +N ++ + + G + +A EM F+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVN-VIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
D T+N ++ G G A+E+ M + P T+ SV++ G V+E
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDL---INSMPVKPDKAVWGALL-GSCR 583
+ MI P + + + L ++ Q++EA +L + S + PD + +L+ G C
Sbjct: 354 DQMIT-RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 584 VHGNVELAQVAAQALISLEPESSGPYVLLYNM 615
+ +VA + + + P YNM
Sbjct: 413 TRNH----RVAMELFEEMRSKGCEPDEFTYNM 440
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 197/459 (42%), Gaps = 72/459 (15%)
Query: 133 VSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKR 188
V+ N++++G+ R+ +A+ L D M E + V+ ++ G + AV +R
Sbjct: 146 VTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER 205
Query: 189 MP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL-VQAYNTLIAGYGQ 243
M + D + A+I+GL + GE D+A +L ++GK + V YNT+I G +
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL---NKMEKGKIEADVVIYNTIIDGLCK 262
Query: 244 SGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE 303
+++A LF+++ + + + +V ++N ++ C G A L M E
Sbjct: 263 YKHMDDAFDLFNKM---------ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 304 R----DTCAWNTMISGYVQISDMEEASKLFKEMPS-----PDALSWNSIISGFAQIGDLK 354
+ D +N +I +V+ + EA KL+ EM PD +++N++I GF + ++
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 355 VAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL 410
+ F M Q+ N +++ +LI G+ + D A +F QM +G PD
Sbjct: 374 EGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD-------- 425
Query: 411 SVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYK 467
++T ++ D NN G + A VF M+
Sbjct: 426 -----------------IMTYNILLDGLCNN---------GNVETALVVFEYMQKRDMKL 459
Query: 468 DVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQF 527
D++T+ MI G D +LF + + P +T+ ++++ GL EE F
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 528 NSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM 566
M D G P + + + R G + +LI M
Sbjct: 520 VEMKED-GPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 190/408 (46%), Gaps = 45/408 (11%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFD 91
L+ ++ I++ R +LS A M + VT N+L++G I++A L D
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDC----VSWNTVISGYA 143
+M Q D V++ ++ G F E L + M + C V++ VI+G
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 144 KNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSA 195
K G D AL L + M E + V N +I G +D A F +M + D
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ + LIS L G A+ +L + + + DLV +N LI + + GK+ EA +L+D
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINP-DLV-FFNALIDAFVKEGKLVEAEKLYD 344
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNT 311
+ + +VV++N+++ + K + E+F M +R +T + T
Sbjct: 345 EMVK--------SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 312 MISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKN 367
+I G+ Q D + A +FK+M S PD +++N ++ G G+++ A FE M +++
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 368 L----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS 411
+ +++ ++I K + +LF + L+G KP+ T ++++S
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 162/357 (45%), Gaps = 43/357 (12%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFD 91
L + I+ L + G A + M+ + V +NT+I G K + + A LF+
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 92 EMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYA 143
+M + D+ ++N +IS C + +L +M E+ D V +N +I +
Sbjct: 275 KMETKGIKPDVFTYNPLIS---CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 144 KNGRMDQALKLFDAMPER-----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDS 194
K G++ +A KL+D M + + V+ N +I GF V+ + F+ M + ++
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 195 ASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLF 254
+ + LI G + + D A + + +G H + YN L+ G +G VE A +F
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQM--VSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 255 DRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWN 310
+ + R + ++V++ +M+ K G + +LF S+ + + +
Sbjct: 450 EYMQK---------RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 311 TMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAKDFFERM 363
TM+SG+ + EEA LF EM P P++ ++N++I + GD + + + M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 157/322 (48%), Gaps = 41/322 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+N I L + + +A F+ M+ + + T+N LIS + A +L +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGR-----KLFDEMPER-----DCVSWNTVISGYAK 144
+++I + +L+ +F+ FV+EG+ KL+DEM + D V++NT+I G+ K
Sbjct: 313 EKNI-NPDLV---FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 145 NGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSAS 196
R+++ +++F M +R N V+ +I GF D D+A FK+M D +
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 197 LSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR 256
+ L+ GL NG ++ A ++ E + K D+V Y T+I ++GKVE+ LF
Sbjct: 429 YNILLDGLCNNGNVETAL-VVFEYMQKRDMKLDIV-TYTTMIEALCKAGKVEDGWDLFCS 486
Query: 257 IPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTM 312
+ + + NVV++ +MM + + G A LF M E ++ +NT+
Sbjct: 487 LSL---------KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 313 ISGYVQISDMEEASKLFKEMPS 334
I ++ D +++L KEM S
Sbjct: 538 IRARLRDGDEAASAELIKEMRS 559
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 210/474 (44%), Gaps = 75/474 (15%)
Query: 134 SWNTVISGYAKNGRMDQALKLFDAMPE----RNAVSSNAVITGFLLNGDVDSAVGFFKRM 189
+++ I+ + + ++ AL + M + + V+ N+++ GF + AV +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 190 PEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
E D+ + + L+ GL ++ + A L+E + DLV Y +I G + G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVA-LVERMVVKGCQPDLV-TYGAVINGLCKRG 229
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER- 304
+ + A L +++ E G+ +VV +N+++ K + A +LF+ M +
Sbjct: 230 EPDLALNLLNKM--------EKGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 305 ---DTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAK 357
D +N +IS +AS+L +M +PD + +N++I F + G L A+
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 358 DFFERMPQK-----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSV 412
++ M + +++++N+LI G+ K + + +E+F +M G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG-------------- 386
Query: 413 CTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDV 469
LV TV +LI + + A VF +M + D+
Sbjct: 387 ---------------LVGNTVT-----YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+T+N ++ G ++G AL +F+ M++ + +T+ +++ A AG VE+G F S
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM----PVKPDKAVWGALL 579
+ + G++P V + + + R+G +EA L M P+ P+ + L+
Sbjct: 487 L-SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLI 538
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 142/303 (46%), Gaps = 20/303 (6%)
Query: 327 KLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNE 382
K+ K P ++ NS+++GF + A ++M Q + +++ +L+ G ++
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCT-GLVDLYLGKQMHQLVTKTVIPDLPIN 440
A+ L +M ++G +PD T +V++ +C G DL L ++++ + D+ I
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL-NLLNKMEKGKIEADVVIY 253
Query: 441 NSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
N++I + + +A +FN+M+ DV T+N +I ++G DA L M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 498 LKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQ 557
I+P + F ++++A G + E + ++ M+ P V + + + + +++
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVE 373
Query: 558 EAMDLINSMPVKPDKAVWGALLGSCRVHG-----NVELAQVAAQALISLEPESSGPYVLL 612
E M++ M + V + + +HG + + AQ+ + ++S + P ++
Sbjct: 374 EGMEVFREMSQR--GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS---DGVHPDIMT 428
Query: 613 YNM 615
YN+
Sbjct: 429 YNI 431
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEM- 93
+N I + R+ E F M R NTVT+ TLI G + R+ A+ +F +M
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 94 ---PQRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG 146
DI+++N+++ G C + VE +F+ M +R D V++ T+I K G
Sbjct: 419 SDGVHPDIMTYNILLDGL---CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRM----PECDSASLS 198
+++ LF ++ + N V+ +++GF G + A F M P +S + +
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 199 ALISGLVRNGELDMAAGILLE---CG-DGDEGKHDLV 231
LI +R+G+ +A ++ E CG GD LV
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLV 572
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 110/291 (37%), Gaps = 50/291 (17%)
Query: 358 DFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VC--- 413
D + P +++ ++ L++ K + I L QMQ G + +T S ++ C
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 414 -TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFN---EMKFYKDV 469
L LGK M P + NSL+ + I EA + + EM + D
Sbjct: 125 QLSLALAILGKMMKL----GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
+T+ ++ G H A +A+ L ++M P +T+ +V+N G + N
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSCRVHG 586
M IE V + + +D L + + +A DL N M +KPD + L+ SC
Sbjct: 241 M-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI-SC---- 294
Query: 587 NVELAQVAAQALISLEPESSGPYVLLYNMYANLELWDDAERVRVLMEEKNV 637
N W DA R+ M EKN+
Sbjct: 295 -----------------------------LCNYGRWSDASRLLSDMLEKNI 316
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Query: 402 DRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DLPINNSLITMYSRCGAIGEACTVF 460
D L + +C L K +H ++ +V DL N+ L+ MYS CG EA +VF
Sbjct: 253 DLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVF 312
Query: 461 NEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLV 520
+M K++ TW +I +A +G DA+++F + K P F + AC G V
Sbjct: 313 EKMS-EKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDV 371
Query: 521 EEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVKPDKAVWGALLG 580
+EG F SM DYGI P +E + S V++ G L EA++ + MP++P+ VW L+
Sbjct: 372 DEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
Query: 581 SCRVHGNVELAQVAAQALISLEP 603
RVHGN+EL A+ + L+P
Sbjct: 432 LSRVHGNLELGDYCAEVVEFLDP 454
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 2/150 (1%)
Query: 336 DALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQ 395
D S + ++ ++ G A FE+M +KNL +W +I + KN + AI++FS+ +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 396 LEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKT--VIPDLPINNSLITMYSRCGAI 453
EG PD + C L D+ G + +++ + P + SL+ MY+ G +
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 454 GEACTVFNEMKFYKDVITWNAMIGGYASHG 483
EA M +V W ++ HG
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/542 (21%), Positives = 235/542 (43%), Gaps = 78/542 (14%)
Query: 48 RTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKA---RQLFDEMPQRDIVS 100
R+G E+ ++M + + + LI G R I KA ++ ++ Q D+ +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 101 WNLIISGYFSCCGSKFVEEGRKLFDEMPERD----CVSWNTVISGYAKNGRMDQALKLFD 156
+N +I+G+ C +++ ++ D M +D V++N +I G++D ALK+ +
Sbjct: 161 YNALINGF---CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 157 AMPERNA----VSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNG 208
+ N ++ +I +L G VD A+ M + D + + +I G+ + G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 209 ELDMAAGIL--LECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKE 266
+D A ++ LE +G V +YN L+ GK EE +L ++ +++ D
Sbjct: 278 MVDRAFEMVRNLEL----KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP-- 331
Query: 267 DGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYVQISDMEEAS 326
NVV+++ ++ + G I A L M E+
Sbjct: 332 -------NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL-------------------- 364
Query: 327 KLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQ----KNLISWNSLIAGYDKNE 382
+PDA S++ +I+ F + G L VA +F E M +++++N+++A KN
Sbjct: 365 -------TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNG 417
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQM-HQLVTKTVIPDLPINN 441
A+E+F ++ G P+ + +++ S D M ++++ + PD N
Sbjct: 418 KADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Query: 442 SLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRL 498
S+I+ R G + EA + +M+ F+ V+T+N ++ G+ DA+ + + M
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGN 537
Query: 499 KIHPTYITFISVLNACAHAGLVEEGRRQFNSM-----INDYGIEPRVEHFASFVDILGRQ 553
P T+ ++ AG E N + I++Y + R+ +++L R
Sbjct: 538 GCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFK-RLHRTFPLLNVLQRS 596
Query: 554 GQ 555
Q
Sbjct: 597 SQ 598
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 16/292 (5%)
Query: 334 SPDALSWNSIISGFAQIGDLKVA---KDFFERMPQKNLISWNSLIAGYDKNEDYKGAIEL 390
+PD + +I GF + ++ A + E+ Q ++ ++N+LI G+ K A +
Sbjct: 121 NPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRV 180
Query: 391 FSQMQLEGEKPDRHTLSSVL-SVCT-GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYS 448
+M+ + PD T + ++ S+C+ G +DL L K ++QL++ P + LI
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL-KVLNQLLSDNCQPTVITYTILIEATM 239
Query: 449 RCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI 505
G + EA + +EM D+ T+N +I G G+ A E+ + ++ P I
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299
Query: 506 TFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINS 565
++ +L A + G EEG + M ++ +P V ++ + L R G+++EAM+L+
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 566 MPVK---PDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYN 614
M K PD + L+ + G +++A + +IS + P ++ YN
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS---DGCLPDIVNYN 407
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 208/444 (46%), Gaps = 56/444 (12%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEM----PQRDIVSWNLIISGYFSCCGSKFVEEGR 121
N+ T+ L+ +++ R+ +KA ++ E+ + DI ++N+++ E+
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK------DEKAC 255
Query: 122 KLFDEMPERDC----VSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGF 173
++F++M +R C ++ +I + G+ D+A+ LF+ M N V N ++
Sbjct: 256 QVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVL 315
Query: 174 LLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
VD A+ F RM E + + S L++ LV G+L G++ + K
Sbjct: 316 AKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV------EISKRY 369
Query: 230 LVQA-YNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKV 288
+ Q Y+ L+ + G V EA RLF + + G+ D S+ SM+
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD---------SYMSMLESLCGA 420
Query: 289 GDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSW 340
G + A E+ + E+ DT +NT+ S ++ + LF++M PSPD ++
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 341 NSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
N +I+ F ++G++ A + FE + + ++IS+NSLI KN D A F +MQ
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 397 EGEKPDRHTLSSVLSVCTGLVD-LYLGKQM-HQLVTKTVIPDLPINNSLITMYSRCGAIG 454
+G PD T S+++ C G + + + + +++ K P++ N L+ + G
Sbjct: 541 KGLNPDVVTYSTLME-CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTA 599
Query: 455 EACTVFNEMK---FYKDVITWNAM 475
EA ++++MK D IT+ +
Sbjct: 600 EAVDLYSKMKQQGLTPDSITYTVL 623
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 114/575 (19%), Positives = 221/575 (38%), Gaps = 122/575 (21%)
Query: 39 WNKKISHLIRTG---RLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFD 91
+N+ I L R+ R R+ DSM H N T N LI ++
Sbjct: 136 YNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDL-------- 187
Query: 92 EMPQRDIVSWNLIISGY-FSCCGSKFVE--EGRKLFDEMPE-------RDCVSWNTVISG 141
+M R + W+L ++ + + C ++ + K FD E D ++N ++
Sbjct: 188 QMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA 247
Query: 142 YAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLN----GDVDSAVGFFKRMPECDSASL 197
AK+ ++A ++F+ M +R+ T + G D AVG F M
Sbjct: 248 LAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEM-------- 296
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ GL N V YNTL+ + V++A ++F R+
Sbjct: 297 --ITEGLTLN-----------------------VVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGERDTCAWNTMISGYV 317
E N++ + V++ +V + + + G ++ ++
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQL---VRLDGVVEISKRYMTQG-----IYSYLVRTLS 383
Query: 318 QISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS--- 370
++ + EA +LF +M S + S+ S++ G A + ++ +K +++
Sbjct: 384 KLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTM 443
Query: 371 -WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLV 429
+N++ + K + +LF +M+ +G PD T
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY----------------------- 480
Query: 430 TKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAV 486
N LI + R G + EA +F E++ D+I++N++I +G
Sbjct: 481 -----------NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVD 529
Query: 487 DALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASF 546
+A FK+M+ ++P +T+ +++ VE F M+ G +P + +
Sbjct: 530 EAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNIL 588
Query: 547 VDILGRQGQLQEAMDLINSMP---VKPDKAVWGAL 578
+D L + G+ EA+DL + M + PD + L
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 129/620 (20%), Positives = 276/620 (44%), Gaps = 76/620 (12%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
N +S L+R+ + EA+ ++ M + VT L+ ++ R+ +A ++F +
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 96 RDIVSWNLIIS-GYFSCCGSKFVEEGRKLFDEMPERDCV-----SWNTVISGYAKNGRMD 149
R L+ S + C + + L EM + V ++ +VI + K G M+
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 150 QALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPE----CDSASLSALI 201
+A+++ D M + +++ +++ G+ ++ A+ F RM E D S ++
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387
Query: 202 SGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQ 261
+N E++ A + ++ +T+I G ++ E A +F ND
Sbjct: 388 EWFCKNMEMEKAIEFYMRMKSVRIAPSSVL--VHTMIQGCLKAESPEAALEIF----NDS 441
Query: 262 GD-------------------GKEDG----------RRFRRNVVSWNSMMMCYVKVGDIV 292
+ GK D + NVV +N+MM+ + ++ ++
Sbjct: 442 FESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMD 501
Query: 293 SARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSII 344
AR +F M E+ + ++ +I G+ + D + A + +M + + + +N+II
Sbjct: 502 LARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTII 561
Query: 345 SGFAQIGDLKVAKDFFERMPQK-----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGE 399
+G ++G AK+ + + ++ + S+NS+I G+ K D A+E + +M G+
Sbjct: 562 NGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK 621
Query: 400 KPDRHTLSSVLS-VC-TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEAC 457
P+ T +S+++ C + +DL L + H++ + + DLP +LI + + + A
Sbjct: 622 SPNVVTFTSLINGFCKSNRMDLAL-EMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 458 TVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNAC 514
T+F+E+ +V +N++I G+ + G A++L+K+M I T+ ++++
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGL 740
Query: 515 AHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPD 571
G + ++ ++ D GI P V+ L ++GQ +A ++ M V P+
Sbjct: 741 LKDGNINLASDLYSELL-DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 572 KAVWGALLGSCRVHGNVELA 591
++ ++ GN+ A
Sbjct: 800 VLLYSTVIAGHHREGNLNEA 819
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 197/424 (46%), Gaps = 81/424 (19%)
Query: 23 ASFHKTNDN-ESSLLHQW--NKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLIS 75
A+ ND+ ES + H + NK + G++ A +F M+ + N V +N ++
Sbjct: 433 AALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMML 492
Query: 76 GHVKRREIAKARQLFDEMPQRDI----VSWNLIISGYFSCCGSKFVEEGRKLFDEMP--- 128
H + + + AR +F EM ++ + +++++I G+F +K + + ++M
Sbjct: 493 AHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFK---NKDEQNAWDVINQMNASN 549
Query: 129 -ERDCVSWNTVISGYAKNGRMDQALKLFDAMPER-----NAVSSNAVITGFLLNGDVDSA 182
E + V +NT+I+G K G+ +A ++ + + + S N++I GF+ GD DSA
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA 609
Query: 183 VGFFKRMPE----CDSASLSALISGLVRNGELDMAAGILLECG---------------DG 223
V ++ M E + + ++LI+G ++ +D+A + E DG
Sbjct: 610 VETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDG 669
Query: 224 DEGKHDL------------------VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGK 265
K+D+ V YN+LI+G+ GK++ A L+ ++ ND
Sbjct: 670 FCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDG---- 725
Query: 266 EDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE----RDTCAWNTMISGYVQISD 321
++ ++ +M+ +K G+I A +L+ + + D +++G +
Sbjct: 726 -----ISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 322 MEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLIS----WNS 373
+ASK+ +EM +P+ L ++++I+G + G+L A + M +K ++ +N
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840
Query: 374 LIAG 377
L++G
Sbjct: 841 LVSG 844
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/469 (20%), Positives = 200/469 (42%), Gaps = 61/469 (13%)
Query: 164 VSSN-AVITGFLLNGDVDSAVGF-FKRMPECDSASLSALISGLVRNGELDMAA---GILL 218
VS+N +I ++N VDS+ F F+ P + + L++ +RN +D A G+++
Sbjct: 141 VSNNPTLIPNVMVNNLVDSSKRFGFELTPR----AFNYLLNAYIRNKRMDYAVDCFGLMV 196
Query: 219 ECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDR--IPNDQGDGKEDGRRFRRNVV 276
D V N +++ +S ++EA+ ++++ + GD V
Sbjct: 197 -----DRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDN-----------V 240
Query: 277 SWNSMMMCYVKVGDIVSARELFDSM----GERDTCAWNTMISGYVQISDMEEASKLFKEM 332
+ +M ++ A ++F + E D ++ + + D+ A L +EM
Sbjct: 241 TTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREM 300
Query: 333 ------PSPDALSWNSIISGFAQIGDLKVAKDFFERMP----QKNLISWNSLIAGYDKNE 382
P+ ++ S+I F + G+++ A + M ++I+ SL+ GY K
Sbjct: 301 RGKLGVPASQE-TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGN 359
Query: 383 DYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCTGL-----VDLYLGKQMHQLVTKTVIPD 436
+ A++LF++M+ EG PD+ S ++ C + ++ Y+ + ++ +V+
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVH 419
Query: 437 LPINNSLITMYSRCGAIGEACTVFNEM--KFYKDVITWNAMIGGYASHGLAVDALELFKQ 494
I L + + A +FN+ + N + + G A K
Sbjct: 420 TMIQGCL-----KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 495 MKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQG 554
M++ I P + + +++ A ++ R F+ M+ + G+EP ++ +D +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML-EKGLEPNNFTYSILIDGFFKNK 533
Query: 555 QLQEAMDLINSMPV---KPDKAVWGALL-GSCRVHGNVELAQVAAQALI 599
Q A D+IN M + ++ ++ ++ G C+V G A+ Q LI
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKV-GQTSKAKEMLQNLI 581
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 211/474 (44%), Gaps = 46/474 (9%)
Query: 146 GRMDQALKLFDAMPERNAV----SSNAVITGFLLNGDVDSAVGFFKRMPECDSA----SL 197
G +++A++ F M S N ++ F G D FFK M + +
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ +I + + G+++ A G+ E G YN++I G+G+ G++++ F+ +
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKF--RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG----ERDTCAWNTMI 313
+ + +V+++N+++ C+ K G + E + M + + +++T++
Sbjct: 324 KDMCCEP---------DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 314 SGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK--- 366
+ + M++A K + +M P+ ++ S+I +IG+L A M Q
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 367 -NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLV-----DLY 420
N++++ +LI G E K A ELF +M G P+ L+S ++ G V D
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN---LASYNALIHGFVKAKNMDRA 491
Query: 421 LGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---FYKDVITWNAMIG 477
L + +++L + + PDL + + I I A V NEMK + + + ++
Sbjct: 492 L-ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 478 GYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIE 537
Y G + L L +MK L I T +TF +++ LV + FN + ND+G++
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 538 PRVEHFASFVDILGRQGQLQEAMDLINSMPVK---PDKAVWGALLGSCRVHGNV 588
F + +D L + Q++ A L M K PD+ + +L+ GNV
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/538 (23%), Positives = 234/538 (43%), Gaps = 78/538 (14%)
Query: 33 SSLLHQWNKKISHLIRTGRLSEARTFFDSM---KHRNTV-TWNTLISGHVKRREIAKARQ 88
+ LLH++ K G+ + + FF M R TV T+N +I K ++ AR
Sbjct: 231 NGLLHRFAK-------LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARG 283
Query: 89 LFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVIS 140
LF+EM R D V++N +I G F G +++ F+EM E D +++N +I+
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDG-FGKVGR--LDDTVCFFEEMKDMCCEPDVITYNALIN 340
Query: 141 GYAKNGRMDQALKLFDAMP----ERNAVSSNAVITGFLLNGDVDSAVGFFKRMPEC---- 192
+ K G++ L+ + M + N VS + ++ F G + A+ F+ M
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 193 DSASLSALISGLVRNGELDMAAGILLECGDGDE----GKHDLVQAYNTLIAGYGQSGKVE 248
+ + ++LI + G L A + G+E G V Y LI G + +++
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRL------GNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 249 EARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER---- 304
EA LF GK D N+ S+N+++ +VK ++ A EL + + R
Sbjct: 455 EAEELF---------GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFF 360
D + T I G + +E A + EM ++L + +++ + + G+
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 361 ERMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
+ M + ++ +++ LI G KN+ A++ F+++ + L + ++ T +
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS------NDFGLQANAAIFTAM 619
Query: 417 VD-LYLGKQMH-------QLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK---F 465
+D L Q+ Q+V K ++PD SL+ + G + EA + ++M
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 466 YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEG 523
D++ + +++ G + A ++M IHP + ISVL G ++E
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 222/472 (47%), Gaps = 62/472 (13%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGR 121
NT+T++TLI+G +++A +L D M + D+++ N +++G C S E
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL---CLSGKEAEAM 213
Query: 122 KLFDEMPERDC----VSWNTVISGYAKNGRMDQALKLFDAMPERN----AVSSNAVITGF 173
L D+M E C V++ V++ K+G+ A++L M ERN AV + +I G
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 174 LLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
+G +D+A F M + + + LI G G D A +L D K
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL-----RDMIKRK 328
Query: 230 L---VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYV 286
+ V ++ LI + + GK+ EA L + + R + +++ S++ +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIH---------RGIAPDTITYTSLIDGFC 379
Query: 287 KVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDAL 338
K + A ++ D M + + +N +I+GY + + +++ +LF++M D +
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 339 SWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQM 394
++N++I GF ++G L VAK+ F+ M + N++++ L+ G N + + A+E+F ++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 395 QLEGEKPDRHTLSSVL-SVCTGLV-----DLYLGKQMHQLVTKTVIPDLPINNSLITMYS 448
+ + D + ++ +C DL+ L K V P + N +I
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC-----SLPLKGVKPGVKTYNIMIGGLC 554
Query: 449 RCGAIGEACTVFNEMK---FYKDVITWNAMIGGYASHGLAVDALELFKQMKR 497
+ G + EA +F +M+ D T+N +I + G A +++L +++KR
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 240/562 (42%), Gaps = 55/562 (9%)
Query: 121 RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVD 180
R + P + ++ + S AK + D L L M E ++ N ++N
Sbjct: 77 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSIMINCFCR 135
Query: 181 --------SAVG-FFKRMPECDSASLSALISGLVRNGELDMAAGI---LLECGDGDEGKH 228
SA+G K E ++ + S LI+GL G + A + ++E G K
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH----KP 191
Query: 229 DLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKV 288
DL+ NTL+ G SGK EA L D++ E G + N V++ ++ K
Sbjct: 192 DLI-TINTLVNGLCLSGKEAEAMLLIDKMV-------EYG--CQPNAVTYGPVLNVMCKS 241
Query: 289 GDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSW 340
G A EL M ER D ++ +I G + ++ A LF EM + + +++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 341 NSIISGFAQIG----DLKVAKDFFERMPQKNLISWNSLIAGYDKNEDYKGAIELFSQMQL 396
N +I GF G K+ +D +R N+++++ LI + K + A EL +M
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 397 EGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQL-VTKTVIPDLPINNSLITMYSRCGAIGE 455
G PD T +S++ L QM L V+K P++ N LI Y + I +
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 456 ACTVFNEMKF---YKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
+F +M D +T+N +I G+ G A ELF++M K+ P +T+ +L+
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VK 569
G E+ F I +E + + + + ++ +A DL S+P VK
Sbjct: 482 GLCDNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 570 PDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNMYANLELWD-DAERV 628
P + ++G G + A++ + +E + P YN+ L D DA +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFR---KMEEDGHAPDGWTYNILIRAHLGDGDATKS 597
Query: 629 RVLMEEKNVKKQTGYSWVDSSN 650
L+EE K+ G+S VD+S
Sbjct: 598 VKLIEE---LKRCGFS-VDAST 615
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 44/234 (18%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
+ I + L +A D M + N T+N LI+G+ K I +LF +M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 95 QRDIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKL 154
R +V+ D V++NT+I G+ + G+++ A +L
Sbjct: 431 LRGVVA------------------------------DTVTYNTLIQGFCELGKLNVAKEL 460
Query: 155 FDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVR 206
F M R N V+ ++ G NG+ + A+ F+++ E D + +I G+
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 207 NGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPND 260
++D A + C +G V+ YN +I G + G + EA LF ++ D
Sbjct: 521 ASKVDDAWDLF--CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFD 91
+ +N I+ + R+ + F M R +TVT+NTLI G + ++ A++LF
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 92 EMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMP----ERDCVSWNTVISGYA 143
EM R +IV++ +++ G C + E+ ++F+++ E D +N +I G
Sbjct: 463 EMVSRKVPPNIVTYKILLDGL---CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 144 KNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPE 191
++D A LF ++P + + N +I G G + A F++M E
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 143/606 (23%), Positives = 250/606 (41%), Gaps = 111/606 (18%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEM------PQRDIVSWNLIISGYFSCCGSKFVEE 119
+ VT+ TL+ G K +E ++ DEM P VS ++ G +EE
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS--LVEGLRK---RGKIEE 350
Query: 120 G----RKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPE----RNAVSSNAVIT 171
+++ D + +N +I K + +A LFD M + N V+ + +I
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 172 GFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLECGDGDEGK 227
F G +D+A+ F M + ++LI+G + G++ A G + E ++
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM--INKKL 468
Query: 228 HDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
V Y +L+ GY GK+ +A RL+ + G+ ++ ++ +++ +
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMT---------GKGIAPSIYTFTTLLSGLFR 519
Query: 288 VGDIVSARELFDSMGE----RDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALS 339
G I A +LF+ M E + +N MI GY + DM +A + KEM PD S
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 340 WNSIISGFAQIGDLKVAKDFFERMPQKNL----ISWNSLIAGYDKNEDYKGAIELFSQMQ 395
+ +I G G AK F + + + N I + L+ G+ + + A+ + +M
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 396 LEGEKPDRHTLSSVLSVCTG-LVD---------LYLG--KQMHQLVTKTVIPDLPINNSL 443
G D VC G L+D L+ G K+MH + + PD I S+
Sbjct: 640 QRGVDLDL--------VCYGVLIDGSLKHKDRKLFFGLLKEMHD---RGLKPDDVIYTSM 688
Query: 444 ITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKI 500
I S+ G EA +++ M + +T+ A+I G G +A L +M+ +
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 501 HP---TYITFISVL--------------NAC------------------AHAGLVEEGRR 525
P TY F+ +L NA G +EE
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 526 QFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMP---VKPDKAVWGALLGSC 582
MI D G+ P + + ++ L R+ +++A++L NSM ++PD+ + L+ C
Sbjct: 809 LITRMIGD-GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 583 RVHGNV 588
V G +
Sbjct: 868 CVAGEM 873
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 134/546 (24%), Positives = 227/546 (41%), Gaps = 88/546 (16%)
Query: 27 KTNDNESSLLHQWNKKISHLIRTGRLSEARTFF----DSMKHRNTVTWNTLISGHVKRRE 82
+ ND S+L I R G+L A +F D+ + +N+LI+GH K +
Sbjct: 399 RPNDVTYSIL------IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 83 IAKARQLFDEMPQRD----IVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVS 134
I+ A EM + +V++ ++ GY C + + +L+ EM + +
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGY---CSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 135 WNTVISGYAKNGRMDQALKLFDAMPE----RNAVSSNAVITGFLLNGDVDSAVGFFKRMP 190
+ T++SG + G + A+KLF+ M E N V+ N +I G+ GD+ A F K M
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 191 E----CDSASLSALISGLVRNGELDMAAGILLECGDG-DEGKHDLVQ-AYNTLIAGYGQS 244
E D+ S LI GL G+ A + DG +G +L + Y L+ G+ +
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFV----DGLHKGNCELNEICYTGLLHGFCRE 625
Query: 245 GKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER 304
GK+EEA + +C +E+ +
Sbjct: 626 GKLEEA------------------------------LSVC----------QEMVQRGVDL 645
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFF 360
D + +I G ++ D + L KEM PD + + S+I ++ GD K A +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 361 ERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT-G 415
+ M + N +++ ++I G K A L S+MQ P++ T L + T G
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 416 LVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITW 472
VD+ ++H + K ++ + N LI + R G I EA + M D IT+
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 473 NAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIN 532
MI A+EL+ M I P + + ++++ C AG + + N M+
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Query: 533 DYGIEP 538
G+ P
Sbjct: 886 Q-GLIP 890
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/562 (21%), Positives = 228/562 (40%), Gaps = 76/562 (13%)
Query: 36 LHQWNKKISHLIRTGRLSEARTFFDSMK----HRNTVTWNTLISGHVKRREIAKARQLFD 91
L +N I L + + EA FD M N VT++ LI +R ++ A
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 92 EMP----QRDIVSWNLIISGYFSCCGSKFVEEG--RKLFDEMPERDCVSWNTVISGYAKN 145
EM + + +N +I+G+ G EG ++ ++ E V++ +++ GY
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKF-GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 146 GRMDQALKLFDAMPERNAVSS----NAVITGFLLNGDVDSAVGFFKRMPE----CDSASL 197
G++++AL+L+ M + S +++G G + AV F M E + +
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 198 SALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRI 257
+ +I G G++ A L E + +G +Y LI G +G+ EA+ D +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTE--KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 258 PNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMI 313
+ E + + ++ + + G + A + M +R D + +I
Sbjct: 604 HKGNCELNE---------ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 314 SGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQK--- 366
G ++ D + L KEM PD + + S+I ++ GD K A ++ M +
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 367 -NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT-GLVDLYLGKQ 424
N +++ ++I G K A L S+MQ P++ T L + T G VD+ +
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 425 MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNAMIGGYASHGL 484
+H + K ++ + T+N +I G+ G
Sbjct: 775 LHNAILKGLLAN--------------------------------TATYNMLIRGFCRQGR 802
Query: 485 AVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFA 544
+A EL +M + P IT+ +++N V++ +NSM + GI P +
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM-TEKGIRPDRVAYN 861
Query: 545 SFVDILGRQGQLQEAMDLINSM 566
+ + G++ +A +L N M
Sbjct: 862 TLIHGCCVAGEMGKATELRNEM 883
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 128/578 (22%), Positives = 221/578 (38%), Gaps = 105/578 (18%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHRNTV-----TWNTLISGHVKRREIAKARQLFDEMPQRD 97
I H +R+ R+ + F M + ++ T + L+ G VK R A +LF++M
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG 222
Query: 98 IVSWNLIISGYF-SCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFD 156
I I +G S C K + +++ M C
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC------------------------ 258
Query: 157 AMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDM 212
+ N V N +I G V AVG K + + D + L+ GL + E ++
Sbjct: 259 ---DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 213 AAGILLE--CGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRR 270
++ E C + A ++L+ G + GK+EEA L R+ D G
Sbjct: 316 GLEMMDEMLCLRFSPSE----AAVSSLVEGLRKRGKIEEALNLVKRVV-DFG-------- 362
Query: 271 FRRNVVSWNSMMMCYVKVGDIVSARELFDSMGE----RDTCAWNTMISGYVQISDMEEAS 326
N+ +N+++ K A LFD MG+ + ++ +I + + ++ A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 327 KLFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQKNL----ISWNSLIAGY 378
EM +NS+I+G + GD+ A+ F M K L +++ SL+ GY
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLP 438
A+ L+ +M +G P +T +++LS GL
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS---GLF--------------------- 518
Query: 439 INNSLITMYSRCGAIGEACTVFNEMKFYK---DVITWNAMIGGYASHGLAVDALELFKQM 495
R G I +A +FNEM + + +T+N MI GY G A E K+M
Sbjct: 519 ----------RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 496 KRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQ 555
I P ++ +++ G E + F ++ E + + R+G+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 556 LQEAMDLINSMP---VKPDKAVWGALLGSCRVHGNVEL 590
L+EA+ + M V D +G L+ H + +L
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 24/313 (7%)
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFF 360
D + T++ G ++ + E ++ EM SP + +S++ G + G ++ A +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV 355
Query: 361 ERMP----QKNLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCT-- 414
+R+ NL +N+LI K + A LF +M G +P+ T S ++ +
Sbjct: 356 KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRR 415
Query: 415 GLVDL---YLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKD 468
G +D +LG+ + + +V P NSLI + + G I A EM K
Sbjct: 416 GKLDTALSFLGEMVDTGLKLSVYP----YNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 469 VITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFN 528
V+T+ +++GGY S G AL L+ +M I P+ TF ++L+ AGL+ + + FN
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 529 SMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSMPVK---PDKAVWGALLGSCRVH 585
M ++ ++P + ++ +G + +A + + M K PD + L+ +
Sbjct: 532 EM-AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 586 GNVELAQVAAQAL 598
G A+V L
Sbjct: 591 GQASEAKVFVDGL 603
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 237/545 (43%), Gaps = 88/545 (16%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGR 121
N T+N LI K++E KAR D M + D+ S++ +I+ + +++
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIN---DLAKAGKLDDAL 204
Query: 122 KLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNAV-----SSNAVITG 172
+LFDEM ER D +N +I G+ K A++L+D + E ++V + N +I+G
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISG 264
Query: 173 FLLNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKH 228
G VD + ++RM E D + S+LI GL G +D A + E DE K
Sbjct: 265 LSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL---DERKA 321
Query: 229 DL-VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVK 287
+ V YNT++ G+ + GK++E+ L+ RI + N+VS+N ++ ++
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNS---------VNIVSYNILIKGLLE 371
Query: 288 VGDIVSA---------------------------------------RELFDSMGERDTCA 308
G I A +E+ S G D A
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYA 431
Query: 309 WNTMISGYVQISDMEEASKLFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMP 364
+ ++I + +EEAS L KEM ++ N++I G + L A F M
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 365 QK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLS-VCTGL-VD 418
+ ++S+N LI G K + A +M G KPD T S +L +C +D
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 419 LYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK---DVITWNAM 475
L L + HQ + + D+ ++N LI G + +A TV M+ +++T+N +
Sbjct: 552 LAL-ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 476 IGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYG 535
+ G+ G + A ++ M ++ + P I++ +++ V F+ N +G
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN-HG 669
Query: 536 IEPRV 540
I P V
Sbjct: 670 IFPTV 674
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 122/535 (22%), Positives = 219/535 (40%), Gaps = 118/535 (22%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQR-- 96
I+ L + G+L +A FD M R + +N LI G +K ++ A +L+D + +
Sbjct: 191 INDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSS 250
Query: 97 ---DIVSWNLIISGYFSC--------------------------------CGSKFVEEGR 121
++ + N++ISG C C + V++
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 122 KLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPERNA---VSSNAVITGFL 174
+F+E+ ER D V++NT++ G+ + G++ ++L+L+ M +N+ VS N +I G L
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLL 370
Query: 175 LNGDVDSAVGFFKRMP----ECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDL 230
NG +D A ++ MP D + I GL NG ++ A G++ E G H
Sbjct: 371 ENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS--GGHLD 428
Query: 231 VQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGD 290
V AY ++I + ++EEA L
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNL------------------------------------- 451
Query: 291 IVSARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISG 346
+E+ E ++ N +I G ++ S + EAS +EM P +S+N +I G
Sbjct: 452 ---VKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 347 FAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
+ G A F + M + +L +++ L+ G ++ A+EL+ Q G + D
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 403 R-------HTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGE 455
H L SV G +D + M + + +L N+L+ + + G
Sbjct: 569 VMMHNILIHGLCSV-----GKLDDAM-TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 456 ACTVFN---EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITF 507
A ++ +M D+I++N ++ G A+E F + I PT T+
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTW 677
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 214/462 (46%), Gaps = 52/462 (11%)
Query: 69 TWNTLISGHVKRREIAKARQLFDEMPQRDIV----SWNLIISGYFSCCGSKFVEEGRKLF 124
++NTL++ V+ ++ K LF + ++N++I C K E+ R
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIK---MSCKKKEFEKARGFL 172
Query: 125 DEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLN 176
D M + D S++TVI+ AK G++D AL+LFD M ER + N +I GFL
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232
Query: 177 GDVDSAVGFFKRMPECDSA-----SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLV 231
D +A+ + R+ E S + + +ISGL + G +D I E +E + DL
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI-WERMKQNEREKDL- 290
Query: 232 QAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDI 291
Y++LI G +G V++A +F+ + D R+ +VV++N+M+ + + G I
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNEL---------DERKASIDVVTYNTMLGGFCRCGKI 341
Query: 292 VSARELFDSMGERDT---CAWNTMISGYVQISDMEEASKLFKEMP----SPDALSWNSII 344
+ EL+ M +++ ++N +I G ++ ++EA+ +++ MP + D ++ I
Sbjct: 342 KESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFI 401
Query: 345 SGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
G G + A + + ++ ++ S+I K + + A L +M G +
Sbjct: 402 HGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVE 461
Query: 401 PDRHTLSSVLSVCTGLV-DLYLGKQ---MHQLVTKTVIPDLPINNSLITMYSRCGAIGEA 456
+ H ++++ GL+ D LG+ + ++ P + N LI + G GEA
Sbjct: 462 LNSHVCNALIG---GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 457 CTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQM 495
EM + D+ T++ ++ G ALEL+ Q
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQF 560
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 182/408 (44%), Gaps = 42/408 (10%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKH----RNTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
N IS L + GR+ + ++ MK ++ T+++LI G + KA +F+E+ +
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Query: 96 R----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQA 151
R D+V++N ++ G+ C K E ++ + + VS+N +I G +NG++D+A
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEA 378
Query: 152 LKLFDAMPERNAVSSNAV----ITGFLLNGDVDSAVGFFKRMP----ECDSASLSALISG 203
++ MP + + I G +NG V+ A+G + + D + +++I
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
L + L+ A+ ++ E G N LI G + ++ EA F R G
Sbjct: 439 LCKKKRLEEASNLVKEM--SKHGVELNSHVCNALIGGLIRDSRLGEA-SFFLREMGKNG- 494
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSA----RELFDSMGERDTCAWNTMISGYVQI 319
R VVS+N ++ K G A +E+ ++ + D ++ ++ G +
Sbjct: 495 -------CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 320 SDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISW 371
++ A +L+ + D + N +I G +G L A M + NL+++
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGEKPD---RHTLSSVLSVCTGL 416
N+L+ G+ K D A ++ M G +PD +T+ L +C G+
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 199/453 (43%), Gaps = 36/453 (7%)
Query: 134 SWNTVISGYAKNGRMDQALKLF----DAMPERNAVSSNAVITGFLLNGDVDSAVGF---- 185
S+NT+++ + + + + LF A N + N +I + + A GF
Sbjct: 116 SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWM 175
Query: 186 FKRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSG 245
+K + D S S +I+ L + G+LD A + E + G V YN LI G+ +
Sbjct: 176 WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE--RGVAPDVTCYNILIDGFLKEK 233
Query: 246 KVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMG--- 302
+ A L+DR+ D NV + N M+ K G + ++++ M
Sbjct: 234 DHKTAMELWDRLLEDSS--------VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 303 -ERDTCAWNTMISGYVQISDMEEASKLFKEM----PSPDALSWNSIISGFAQIGDLKVAK 357
E+D ++++I G ++++A +F E+ S D +++N+++ GF + G +K +
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESL 345
Query: 358 DFFERMPQKN---LISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVC 413
+ + M KN ++S+N LI G +N A ++ M +G D+ T + +C
Sbjct: 346 ELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 414 T-GLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK---DV 469
G V+ LG M ++ + D+ S+I + + EA + EM + +
Sbjct: 406 VNGYVNKALG-VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNS 464
Query: 470 ITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNS 529
NA+IGG +A ++M + PT +++ ++ AG E
Sbjct: 465 HVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKE 524
Query: 530 MINDYGIEPRVEHFASFVDILGRQGQLQEAMDL 562
M+ + G +P ++ ++ + L R ++ A++L
Sbjct: 525 MLEN-GWKPDLKTYSILLCGLCRDRKIDLALEL 556
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 232/537 (43%), Gaps = 118/537 (21%)
Query: 144 KNGRMDQALKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISG 203
KN R A LFD+ + +AV+ +L +R+ E + + I
Sbjct: 21 KNPR--AAFALFDSATRHPGYAHSAVVYHHIL-----------RRLSETRMVNHVSRIVE 67
Query: 204 LVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGD 263
L+R+ E + L ++I YG++ ++A +F R+ +
Sbjct: 68 LIRSQECKCDEDVAL-----------------SVIKTYGKNSMPDQALDVFKRMR--EIF 108
Query: 264 GKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELF---DSMG-ERDTCAWNTMISGYVQI 319
G E R S+N+++ +V+ V LF ++ G + +N +I +
Sbjct: 109 GCEPAIR------SYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKK 162
Query: 320 SDMEEASK----LFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISW 371
+ E+A ++KE PD S++++I+ A+ G L A + F+ M ++ ++ +
Sbjct: 163 KEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCY 222
Query: 372 NSLIAGYDKNEDYKGAIELFSQMQLEGE-KPDRHT---LSSVLSVCTGLVD--LYLGKQM 425
N LI G+ K +D+K A+EL+ ++ + P+ T + S LS C G VD L + ++M
Sbjct: 223 NILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC-GRVDDCLKIWERM 281
Query: 426 HQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMKFYK---DVITWNAMIGGYASH 482
Q + DL +SLI G + +A +VFNE+ K DV+T+N M+GG+
Sbjct: 282 KQNERE---KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 483 GLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMI----------- 531
G ++LEL++ M+ H + +S GL+E G+ +MI
Sbjct: 339 GKIKESLELWRIME----HKNSVNIVSY--NILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 532 --------------NDY-----GIEPRVEH---------FASFVDILGRQGQLQEAMDLI 563
N Y G+ VE +AS +D L ++ +L+EA +L+
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 564 NSMP---VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSG--PYVLLYNM 615
M V+ + V AL+G G + +++ + E +G P V+ YN+
Sbjct: 453 KEMSKHGVELNSHVCNALIG-----GLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 139/631 (22%), Positives = 275/631 (43%), Gaps = 105/631 (16%)
Query: 25 FHKTNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKHRNTVT--------------- 69
FH N +SL + I L+R+GRLS+A++ M R+ V+
Sbjct: 104 FHFPNFKHTSL--SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161
Query: 70 ------WNTLISGHVKRREIAKARQLFDEMPQRDI----------------VSWNLIISG 107
++ LI +V+ R++ +A + F + + + W + G
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 108 YF--------------------SCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYA 143
+ + C +E+ ++ E+ D V++NT+IS Y+
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 144 KNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPEC----DSA 195
G M++A +L +AMP + + N VI G +G + A F M DS
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 196 SLSALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFD 255
+ +L+ + G++ + + D DLV ++++++ + +SG +++A F+
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVP-DLV-CFSSMMSLFTRSGNLDKALMYFN 399
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNT 311
+ KE G NV+ + ++ Y + G I A L + M ++ D +NT
Sbjct: 400 SV-------KEAG-LIPDNVI-YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 312 MISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFFERMPQK- 366
++ G + + EA KLF EM PD+ + +I G ++G+L+ A + F++M +K
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 367 ---NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVL-SVCTG--LVDLY 420
+++++N+L+ G+ K D A E+++ M + P + S ++ ++C+ L + +
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 421 LGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITWNAMIG 477
+ ++++K + P + I NS+I Y R G + + +M F D I++N +I
Sbjct: 571 --RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 478 GYASHGLAVDALELFKQMKRLK--IHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYG 535
G+ A L K+M+ + + P T+ S+L+ ++E MI + G
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERG 687
Query: 536 IEPRVEHFASFVDILGRQGQLQEAMDLINSM 566
+ P + ++ Q L EA + + M
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 241/545 (44%), Gaps = 69/545 (12%)
Query: 40 NKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQ 95
N I L+R G + A + + N T N +++ K ++ K ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 96 R----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERD----CVSWNTVISGYAKNGR 147
+ DIV++N +IS Y S +EE +L + MP + ++NTVI+G K+G+
Sbjct: 264 KGVYPDIVTYNTLISAYSS---KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK 320
Query: 148 MDQALKLFDAMPERNAVSSNAVITGFLL-----NGDVDSAVGFFKRMPE----CDSASLS 198
++A ++F M R+ +S ++ LL GDV F M D S
Sbjct: 321 YERAKEVFAEML-RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFS 379
Query: 199 ALISGLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIP 258
+++S R+G LD A + +++ Y LI GY + G + A L + +
Sbjct: 380 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI--YTILIQGYCRKGMISVAMNLRNEML 437
Query: 259 NDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMIS 314
QG + VV++N+++ K + A +LF+ M ER D+ +I
Sbjct: 438 Q-QGCAMD--------VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 315 GYVQISDMEEASKLFKEMPSP----DALSWNSIISGFAQIGDLKVAKDFFERMPQKNL-- 368
G+ ++ +++ A +LF++M D +++N+++ GF ++GD+ AK+ + M K +
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 369 --ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYL----- 421
IS++ L+ A ++ +M + KP + +C ++ Y
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP-------TVMICNSMIKGYCRSGNA 601
Query: 422 --GKQ-MHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEMK-----FYKDVITWN 473
G+ + +++++ +PD N+LI + R + +A + +M+ DV T+N
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 474 AMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMIND 533
+++ G+ +A + ++M ++P T+ ++N + E R + M+
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 534 YGIEP 538
G P
Sbjct: 722 -GFSP 725
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 175/394 (44%), Gaps = 75/394 (19%)
Query: 39 WNKKISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMP 94
++ +S R+G L +A +F+S+K + V + LI G+ ++ I+ A L +EM
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 95 QR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPER----DCVSWNTVISGYAKNG 146
Q+ D+V++N I+ G C K + E KLF+EM ER D + +I G+ K G
Sbjct: 438 QQGCAMDVVTYNTILHGL---CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 147 RMDQALKLFDAMPER----NAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALIS 202
+ A++LF M E+ + V+ N ++ GF GD+D+A +
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA--------------- 539
Query: 203 GLVRNGELDMAAGILLECGDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQG 262
DM + +L +Y+ L+ G + EA R++D + +
Sbjct: 540 --------DMVSKEILPTP----------ISYSILVNALCSKGHLAEAFRVWDEMIS--- 578
Query: 263 DGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQ 318
+ + V+ NSM+ Y + G+ + M D ++NT+I G+V+
Sbjct: 579 ------KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 319 ISDMEEASKLFKEMPS------PDALSWNSIISGFAQIGDLKVAKDFFERMPQKNL---- 368
+M +A L K+M PD ++NSI+ GF + +K A+ +M ++ +
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 369 ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
++ +I G+ ++ A + +M G PD
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 453 IGEACTVFNEMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLN 512
+G + E Y D++T+N +I Y+S GL +A EL M P T+ +V+N
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 513 ACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINSM---PVK 569
G E + F M+ G+ P + S + ++G + E + + M V
Sbjct: 314 GLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Query: 570 PDKAVWGALLGSCRVHGNVELA 591
PD + +++ GN++ A
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKA 394
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 210/510 (41%), Gaps = 87/510 (17%)
Query: 66 NTVTWNTLISGHVKRREIAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGR 121
N VT+ TLI+G KR E+ +A LF M QR D+++++ +I GYF + + G
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK---AGMLGMGH 341
Query: 122 KLFDEMPER----DCVSWNTVISGYAKNGRMDQALKLFDAM----PERNAVSSNAVITGF 173
KLF + + D V +++ I Y K+G + A ++ M N V+ +I G
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 174 LLNGDVDSAVGFF----KRMPECDSASLSALISGLVRNGELDMAAGILLECGDGDEGKHD 229
+G + A G + KR E + S+LI G + G L +G L G
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL--RSGFALYEDMIKMGYPP 459
Query: 230 LVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVG 289
V Y L+ G + G + A R K G+ R NVV +NS++ + ++
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRF---------SVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 290 DIVSARELFDSMG---------------------------------------------ER 304
A ++F MG
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 305 DTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSIISGFAQIGDLKVAKDFF 360
D N +I + +E+ASK F + PD +++N++I G+ + L A+ F
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 361 ERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGL 416
E + N ++ LI KN D GAI +FS M +G KP+ T ++ +
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 417 VDLYLG-KQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFNEM---KFYKDVITW 472
VD+ K ++ K + P + + +I + G + EA +F++ K DV+ +
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 473 NAMIGGYASHGLAVDALELFKQMKRLKIHP 502
+I GY G V+A L++ M R + P
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 233/539 (43%), Gaps = 104/539 (19%)
Query: 123 LFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAVSSNAVITGFLLNGD 178
+ D P + V++ T+I+G+ K G MD+A LF M +R + ++ + +I G+ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 179 VDSAVGFFKRM----PECDSASLSALISGLVRNGELDMAAGIL--LECGDGDEGKHDLVQ 232
+ F + + D S+ I V++G+L A+ + + C +G V
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC----QGISPNVV 392
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
Y LI G Q G++ EA ++ +I R ++V+++S++ + K G++
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILK---------RGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 293 SARELFDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPSPDALSWNSIISGFAQIGD 352
S L++ M + GY PD + + ++ G ++ G
Sbjct: 444 SGFALYEDM----------IKMGY-----------------PPDVVIYGVLVDGLSKQGL 476
Query: 353 LKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPDRHTLSS 408
+ A F +M + N++ +NSLI G+ + + A+++F M + G KPD T ++
Sbjct: 477 MLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT 536
Query: 409 VLSVCTGLVDLY-------LGKQMHQLVTKTVI-PDLPINNSLITMYSRCGAIGEACTVF 460
V+ V + D + +G Q+ L+ + I D+ + N +I + +C I +A F
Sbjct: 537 VMRVSI-MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 595
Query: 461 N---EMKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYIT---FISVL--- 511
N E K D++T+N MI GY S +A +F+ +K P +T I VL
Sbjct: 596 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Query: 512 --------------------NACAHAGLVE--------EGRRQFNSMINDYGIEPRVEHF 543
NA + L++ EG + + + GI P + +
Sbjct: 656 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 715
Query: 544 ASFVDILGRQGQLQEAMDLINS---MPVKPDKAVWGALL-GSCRVHGNVELAQVAAQAL 598
+ +D L ++G++ EA ++ + + PD + L+ G C+V VE A + L
Sbjct: 716 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 122/550 (22%), Positives = 234/550 (42%), Gaps = 66/550 (12%)
Query: 134 SWNTVISGYAKNGRMDQALKLFDAM-----PERNAVSS------NAVITGFLLN-----G 177
S+ T+ +NG D A K+FD M + N + S +A + FL+ G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160
Query: 178 DVDSAVGFFKRMPECDSA----SLSALISGLVRNGELDMAAGILLE-CGDGDEGKHDLVQ 232
VD A+ F + S+ +++ L+ + +D+ A + C G E V
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG--VS 218
Query: 233 AYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIV 292
A+ ++ G+V +A F R+ ++G FR +VS N ++ + V I
Sbjct: 219 AHGFVLDALFCKGEVTKALD-FHRLVMERG--------FRVGIVSCNKVLKG-LSVDQIE 268
Query: 293 SAREL----FDSMGERDTCAWNTMISGYVQISDMEEASKLFKEMPS----PDALSWNSII 344
A L D + + T+I+G+ + +M+ A LFK M PD ++++++I
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 345 SGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAIELFSQMQLEGEK 400
G+ + G L + F + K +++ ++S I Y K+ D A ++ +M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 401 PDRHTLSSVLSVCTGLVDLYLGKQMH-QLVTKTVIPDLPINNSLITMYSRCGAIGEACTV 459
P+ T + ++ +Y M+ Q++ + + P + +SLI + +CG + +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 460 FNE---MKFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACAH 516
+ + M + DV+ + ++ G + GL + A+ +M I + F S+++
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 517 AGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAM---------DLINSMP 567
+E + F M YGI+P V F + + + + + M DL+
Sbjct: 509 LNRFDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 568 VKPDKAVWGALLGSCRVHGNVELAQVAAQALISLEPESSGPYVLLYNM----YANLELWD 623
+ D AV ++ +E A LI + E P ++ YN Y +L D
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME---PDIVTYNTMICGYCSLRRLD 624
Query: 624 DAERVRVLME 633
+AER+ L++
Sbjct: 625 EAERIFELLK 634
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 169/399 (42%), Gaps = 54/399 (13%)
Query: 43 ISHLIRTGRLSEARTFFDSMKHR----NTVTWNTLISGHVKRREIAKARQLFDEMPQR-- 96
I L + GR+ EA + + R + VT+++LI G K + L+++M +
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 97 --DIVSWNLIISGYFSCCGSKF--VEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQAL 152
D+V + +++ G S G + K+ + + V +N++I G+ + R D+AL
Sbjct: 458 PPDVVIYGVLVDG-LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 153 KLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKRMPECDSASLSALISGLVRN----- 207
K+F M A T + ++ A F K M L L+ RN
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDA--FCKHMKPTIGLQLFDLMQ---RNKISAD 571
Query: 208 -GELDMAAGILLECG---DGDEGKHDLVQA--------YNTLIAGYGQSGKVEEARRLFD 255
++ +L +C D + ++L++ YNT+I GY +++EA R+F+
Sbjct: 572 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
Query: 256 RIPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSARELFDSMGER----DTCAWNT 311
+ F N V+ ++ K D+ A +F M E+ + +
Sbjct: 632 LLKVTP---------FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 312 MISGYVQISDMEEASKLFKEMP----SPDALSWNSIISGFAQIGDLKVAKDFFERMPQKN 367
++ + + D+E + KLF+EM SP +S++ II G + G + A + F +
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 368 L----ISWNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD 402
L +++ LI GY K A L+ M G KPD
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 142/663 (21%), Positives = 288/663 (43%), Gaps = 98/663 (14%)
Query: 1 MSTCLMRLSRLQLPRTL---CSRGLASFHKTNDNESSLLHQWNKKISHLIRTGRLSEART 57
+ T +R++ + P L C RG ++F N L +K S L+
Sbjct: 22 LETGTLRIALINCPNELLFCCERGFSTFSDRN------LSYRDKLSSGLVGIKADDAVDL 75
Query: 58 FFDSMKHR---NTVTWNTLISGHVKRRE----IAKARQLFDEMPQRDIVSWNLIISGYFS 110
F D ++ R + +N L S K ++ +A +Q+ + I + +++I+ +
Sbjct: 76 FRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCR 135
Query: 111 C--CGSKFVEEGRKLFDEMPERDCVSWNTVISGYAKNGRMDQALKLFDAMPER----NAV 164
C F G K+ E D V +NT+++G R+ +AL+L D M E +
Sbjct: 136 CRKLSYAFSTMG-KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 165 SSNAVITGFLLNGDVDSAVGFFKRMPEC----DSASLSALISGLVRNGELDMAAGILLEC 220
+ N ++ G LNG V AV RM E + + +++ + ++G+ +A +L +
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 221 GDGDEGKHDLVQAYNTLIAGYGQSGKVEEARRLFDRIPNDQGDGKEDGRRFRRNVVSWNS 280
+ + K D V+ Y+ +I G + G ++ A LF+ + + + F+ +++++N+
Sbjct: 255 EERNI-KLDAVK-YSIIIDGLCKDGSLDNAFNLFNEM---------EIKGFKADIITYNT 303
Query: 281 MMMCYVKVGDIVSARELFDSMGER----DTCAWNTMISGYVQISDMEEASKLFKEM---- 332
++ + G +L M +R + ++ +I +V+ + EA +L KEM
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 333 PSPDALSWNSIISGFAQIGDLKVAKDFFERMPQK----NLISWNSLIAGYDKNEDYKGAI 388
+P+ +++NS+I GF + L+ A + M K +++++N LI GY K +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 389 ELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYS 448
ELF +M L G VI + N+L+ +
Sbjct: 424 ELFREMSLRG----------------------------------VIANTVTYNTLVQGFC 449
Query: 449 RCGAIGEACTVFNEM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYI 505
+ G + A +F EM + D++++ ++ G +G ALE+F ++++ K+
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 506 TFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGRQGQLQEAMDLINS 565
++ +++ +A V++ F S+ G++ + + L R+ L +A L
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSL-PLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 566 MPVK---PDKAVWGALLGSCRVHGNVELAQVAAQALISLE----PESSGPYVLLYNMYAN 618
M + PD+ + L+ R H + A AA+ + ++ P ++ NM ++
Sbjct: 569 MTEEGHAPDELTYNILI---RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Query: 619 LEL 621
EL
Sbjct: 626 GEL 628
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 240/537 (44%), Gaps = 82/537 (15%)
Query: 28 TNDNESSLLHQWNKKISHLIRTGRLSEARTFFDSMKH-----RNTVTWNTLISGHVKRRE 82
T++ S +LH + + +G LS+A +D + + + N+L+S VK R
Sbjct: 133 THEALSHVLHAYAE-------SGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRR 185
Query: 83 IAKARQLFDEMPQR----DIVSWNLIISGYFSCCGSKFVEEGRKLFDEMPERDCVS---- 134
+ AR+++DEM R D S +++ G C VE GRKL + + C+
Sbjct: 186 LGDARKVYDEMCDRGDSVDNYSTCILVKGM---CNEGKVEVGRKLIEGRWGKGCIPNIVF 242
Query: 135 WNTVISGYAKNGRMDQA------LKLFDAMPERNAVSSNAVITGFLLNGDVDSAVGFFKR 188
+NT+I GY K G ++ A LKL MP + +I GF GD ++
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT--MINGFCKEGDFVASDRLLSE 300
Query: 189 MPE----CDSASLSALISGLVRNG-ELDMAAGI--LLECGDGDEGKHDLVQAYNTLIAGY 241
+ E L+ +I R+G ++D A I ++ ++ K D V YN LI
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII----ANDCKPD-VATYNILINRL 355
Query: 242 GQSGKVEEARRLFDR------IPNDQGDGKEDGRRFRRNVVSWNSMMMCYVKVGDIVSAR 295
+ GK E A D IPN+ +S+ ++ Y K + A
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNN---------------LSYAPLIQAYCKSKEYDIAS 400
Query: 296 ELFDSMGER----DTCAWNTMISGYVQISDMEEA----SKLFKEMPSPDALSWNSIISGF 347
+L M ER D + +I G V M++A KL SPDA +N ++SG
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 348 AQIGDLKVAKDFFERMPQKNLIS----WNSLIAGYDKNEDYKGAIELFSQMQLEGEKPD- 402
+ G AK F M +N++ + +LI G+ ++ D+ A ++FS +G K D
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDV 520
Query: 403 RHTLSSVLSVC-TGLVDLYLGKQMHQLVTKTVIPDLPINNSLITMYSRCGAIGEACTVFN 461
H + + C +G++D L M+++ + ++PD +++I Y + + A +F
Sbjct: 521 VHHNAMIKGFCRSGMLDEALA-CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 462 EM---KFYKDVITWNAMIGGYASHGLAVDALELFKQMKRLKIHPTYITFISVLNACA 515
M K +V+T+ ++I G+ G A E FK+M+ + P +T+ +++ + A
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 25/290 (8%)
Query: 320 SDMEEASKLFKEMPSPDALSWNSIISGFAQIGDLKVAKDFFERMPQKNLISWNSL-IAGY 378
S++ E +K + L+ NS++ + VA++ + +++SL I G
Sbjct: 47 SEITEMINRYKRNVAGHTLTQNSMVGQYKTTVSPSVAQNV-------TIETFDSLCIQG- 98
Query: 379 DKNEDYKGAIELFSQMQLEGEKPDRHTLSSVLSVCTGLVDLYLGKQMHQLVTKTVIP-DL 437
+++ A+E+ ++ +G D L + +C L + +H+ + V P D+
Sbjct: 99 ----NWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDV 154
Query: 438 PINNSLITMYSRCGAIGEACTVFNEMKFYKDVITWNA-----MIGGYASHGLAVDALELF 492
N++I MYS C ++ +A VF EM WN+ M+ + ++G +A++LF
Sbjct: 155 GARNAIIEMYSGCCSVDDALKVFEEMP------EWNSGTLCVMMRCFVNNGYGEEAIDLF 208
Query: 493 KQMKRLKIHPTYITFISVLNACAHAGLVEEGRRQFNSMINDYGIEPRVEHFASFVDILGR 552
+ K P F V + C G V+EG QF +M +YGI P +EH+ S +L
Sbjct: 209 TRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLAT 268
Query: 553 QGQLQEAMDLINSMPVKPDKAVWGALLGSCRVHGNVELAQVAAQALISLE 602
G L EA++ + MP++P VW L+ RVHG+VEL A+ + L+
Sbjct: 269 SGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318