Miyakogusa Predicted Gene
- Lj3g3v3527350.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LIR1_SOYBN |
364 |
92.9 |
95.1 |
(tr|I1LIR1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G28700.2 |
317 |
79.8 |
88.5 |
| Symbols: | Protein of unknown function (DUF185) | chr3:10759580-10761894 FORWARD LENGTH=471 |
| Medicago |
Medtr4g075200.1 |
359 |
78.8 |
84.2 |
| midA | HC | chr4:28723837-28720171 | 20130731 |
| Soybean |
Glyma11g10540.1 |
364 |
92.9 |
95.1 |
|
| LJGI |
gnl|LJGI|TC64691 |
1320 |
100.0 |
100.0 |
similar to UniRef100_A7PMM6 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3527350.1 |
length: 222 aa. |
| IPR003788 |
Putative S-adenosyl-L-methionine-dependent methyltransferase MidA |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12049 |
UNCHARACTERIZED |
1.1e-77 |
27-221 |
| HMMPfam |
PF02636 |
Methyltransf_28 |
6.6e-25 |
117-219 |
| no_ID |
|
| HMMPanther |
PTHR12049:SF5 |
SUBFAMILY |
1.1e-77 |
27-221 |
| Seg |
seg |
seg |
NA |
28-38 |
| superfamily |
SSF53335 |
S-adenosyl-L-methionine-dependent |
6e-44 |
55-221 |
- Wolf-PSORT
Lj3g3v3527350.1 mito 8.5, chlo_mito 5.5, nucl 3, chlo 1.5, cyto_nucl 1.5, cysk_nucl 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3527350.1 |
|