Miyakogusa Predicted Gene

Lj3g3v3527350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v3527350.1 Non Characterized Hit- tr|I1LIR1|I1LIR1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42574
PE,78.7,0,Methyltransf_28,Putative S-adenosyl-L-methionine-dependent
methyltransferase MidA; seg,NULL; SUBFAMI,CUFF.45947.1
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g075200.1 | midA | HC | chr4:28723837-28720171 | 20130731       359   1e-99
Medtr4g075200.2 | midA | HC | chr4:28723462-28720171 | 20130731       276   8e-75

>Medtr4g075200.1 | midA | HC | chr4:28723837-28720171 | 20130731
          Length = 449

 Score =  359 bits (921), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/222 (78%), Positives = 187/222 (84%), Gaps = 7/222 (3%)

Query: 1   MLRKVLHQSLPFNRRIATAGSAAPPWLXXXXXXXXXXXDRSGLYNPPDHSHHPTSDSELV 60
           MLR+V+ +SL    R  TA S                 DRS L+NPP+HSH P SDSELV
Sbjct: 1   MLRRVVQKSLRTFHRPITAASC-------HYSSSTISIDRSSLHNPPEHSHQPISDSELV 53

Query: 61  KHLKGIIKFRGGPISLGEYMSEVLTNPKAGYYINRDVFGAEGDFITSPEVSQMFGEMVGV 120
           KHLKGIIKFRGGPISLGEYMSEVLTNPKAGYYINRDVFGA+GDFITSPEVSQMFGEMVGV
Sbjct: 54  KHLKGIIKFRGGPISLGEYMSEVLTNPKAGYYINRDVFGAQGDFITSPEVSQMFGEMVGV 113

Query: 121 WVMCLWEQMGQPQRVNLVELGPGRGTLMADLLRGASKFKNFVESLHVHLVECSPALQKLQ 180
           WVMCLWEQMG+P+RVNLVELGPGRGTLMADLLRGASKFKNF ESLHVHLVECSPAL+ LQ
Sbjct: 114 WVMCLWEQMGRPERVNLVELGPGRGTLMADLLRGASKFKNFTESLHVHLVECSPALKTLQ 173

Query: 181 HQKLKCIDDENAAQDADKRTVSSLVGTPVSWHATLEQVPSGS 222
           H+ LKC+D+ENA  D DKRTVSS VGTPVSWHATLEQVPSGS
Sbjct: 174 HKNLKCVDEENADGDTDKRTVSSFVGTPVSWHATLEQVPSGS 215


>Medtr4g075200.2 | midA | HC | chr4:28723462-28720171 | 20130731
          Length = 377

 Score =  276 bits (707), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 129/143 (90%), Positives = 136/143 (95%)

Query: 80  MSEVLTNPKAGYYINRDVFGAEGDFITSPEVSQMFGEMVGVWVMCLWEQMGQPQRVNLVE 139
           MSEVLTNPKAGYYINRDVFGA+GDFITSPEVSQMFGEMVGVWVMCLWEQMG+P+RVNLVE
Sbjct: 1   MSEVLTNPKAGYYINRDVFGAQGDFITSPEVSQMFGEMVGVWVMCLWEQMGRPERVNLVE 60

Query: 140 LGPGRGTLMADLLRGASKFKNFVESLHVHLVECSPALQKLQHQKLKCIDDENAAQDADKR 199
           LGPGRGTLMADLLRGASKFKNF ESLHVHLVECSPAL+ LQH+ LKC+D+ENA  D DKR
Sbjct: 61  LGPGRGTLMADLLRGASKFKNFTESLHVHLVECSPALKTLQHKNLKCVDEENADGDTDKR 120

Query: 200 TVSSLVGTPVSWHATLEQVPSGS 222
           TVSS VGTPVSWHATLEQVPSGS
Sbjct: 121 TVSSFVGTPVSWHATLEQVPSGS 143