Miyakogusa Predicted Gene

Lj3g3v3386760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q2PEQ1_TRIPR 1117 76.1 83.0 (tr|Q2PEQ1) Arginine decarboxylase OS=Trifolium pratense PE=2 SV=1
TAIR_pep AT2G16500.1 937 70.9 81.4 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine decarboxylase 1 | chr2:7150796-7152904 REVERSE LENGTH=702
Medicago Medtr4g072020.1 1053 73.9 82.0 | arginine decarboxylase | HC | chr4:27309255-27312345 | 20130731
Soybean Glyma06g00990.1 951 71.8 80.9  
LJGI gnl|LJGI|TC68262 2258 99.8 99.8 similar to UniRef100_Q2PEQ1 Cluster: Arginine decarboxylase; n=1; Trifolium pratense|Rep: Arginine decarboxylase - Trifolium pratense (Red clover), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3386760.1 length: 710 aa.
IPR000183 Ornithine/DAP/Arg decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR01179 ODADCRBXLASE 1.3e-21 142-160
166-178
285-298
380-399
572-585
IPR002985 Arginine decarboxylase
Biological Process GO:0006527 arginine catabolic process    
Biological Process GO:0008295 spermidine biosynthetic process    
Molecular Function GO:0008792 arginine decarboxylase activity    
FPrintScan PR01180 ARGDCRBXLASE 1.1e-103 110-125
134-148
192-207
218-239
242-264
370-387
498-519
523-548
572-593
HMMPIR PIRSF001336 Arginine 0 40-674
HMMPanther PTHR11482:SF3 ARGININE 2e-304 38-634
HMMTigr TIGR01273 speA: 2.3e-228 40-662
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
superfamily SSF50621 Alanine 9.1e-06 471-593
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00278 Orn_DAP_Arg_deC 5.2e-31 461-593
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF02784 Orn_Arg_deC_N 2.3e-55 130-391
IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
PatternScan PS00878 ODR_DC_2_1 NA 142-160
IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site
PatternScan PS00879 ODR_DC_2_2 NA 323-336
no_ID  
Gene3D G3DSA:3.20.20.10 no description 3.5e-54 112-390
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 2e-304 38-634
Seg seg seg NA 26-32
329-341
682-700
superfamily SSF51419 PLP-binding 1.3e-67 110-393
Wolf-PSORT
Lj3g3v3386760.1	cyto 7, extr 2, pero 2, chlo 1, nucl 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3386760.1