Miyakogusa Predicted Gene

Lj3g3v1011060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LUK7_SOYBN 2255 88.0 93.6 (tr|K7LUK7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G28345.1 1290 52.5 70.8 | Symbols: | ABC transporter family protein | chr3:10593921-10598775 REVERSE LENGTH=1240
Medicago Medtr4g081190.1 2217 86.1 92.9 | ABC transporter B family protein | HC | chr4:31437802-31442803 | 20130731
Soybean Glyma06g42040.1 2055 88.0 93.5  
LJGI gnl|LJGI|TC64957 87.7 79.9 79.9 similar to UniRef100_A7P469 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1011060.1 length: 1255 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 5.7e-39 17-285
688-957
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 5.9e-24 385-510
1051-1176
ProfileScan PS50893 ABC_TRANSPORTER_2 24.310 343-579
1009-1245
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 9.2e-14 370-562
1036-1228
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 3.4e-46 651-1160
6-324
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 482-496
1148-1162
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 41.154 19-308
686-973
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-66 322-565
1009-1231
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 2.1e-50 7-324
673-990
Gene3D G3DSA:3.40.50.300 no description 4.3e-79 343-575
1009-1234
HMMPanther PTHR24221 FAMILY 0 8-1249
HMMPanther PTHR24221:SF24 SUBFAMILY 0 8-1249
Seg seg seg NA 685-698
Wolf-PSORT
Lj3g3v1011060.1	plas 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1011060.1