Miyakogusa Predicted Gene
- Lj2g3v3319320.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M6D4_SOYBN |
322 |
70.0 |
82.1 |
(tr|I1M6D4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G26490.1 |
220 |
50.3 |
74.6 |
| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr4:13380425-13381231 FORWARD LENGTH=268 |
| Medicago |
Medtr5g096680.1 |
290 |
61.4 |
80.0 |
| late embryogenesis abundant protein | HC | chr5:42286627-42285582 | 20130731 |
| Soybean |
Glyma14g01460.1 |
322 |
70.0 |
82.1 |
|
| LJGI |
gnl|LJGI|TC76120 |
930 |
100.0 |
100.0 |
weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined scaffold_142, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_142, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3319320.1 |
length: 237 aa. |
| IPR004864 |
Late embryogenesis abundant protein, LEA-14 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03168 |
LEA_2 |
2.1e-08 |
119-208 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
2-18 |
- Wolf-PSORT
Lj2g3v3319320.1 nucl 5, golg 4, chlo 1, cyto 1, extr 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3319320.1 |
|