Miyakogusa Predicted Gene
- Lj2g3v3319320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v3319320.1 tr|B6UDA2|B6UDA2_MAIZE Harpin-induced protein
OS=Zea mays PE=2 SV=1,27.23,6e-19,LEA_2,Late embryogenesis abundant
protein, LEA-14; seg,NULL,NODE_45710_length_1044_cov_36.521072.path2.1
(714 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76120 weakly similar to UniRef100_A7QQD5 Cluster: Chr... 930 0.0
gnl|LJGI|TC76983 474 e-133
gnl|LJGI|FS327773 weakly similar to UniRef100_A7QQD5 Cluster: Ch... 232 2e-60
gnl|LJGI|BP057466 weakly similar to UniRef100_A7QQD5 Cluster: Ch... 151 7e-36
>gnl|LJGI|TC76120 weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 493
Score = 930 bits (469), Expect = 0.0
Identities = 469/469 (100%)
Strand = Plus / Plus
Query: 1 atgctatccaactcacccccactctcagaggaaactagtcctctttctcttgaacatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 atgctatccaactcacccccactctcagaggaaactagtcctctttctcttgaacatatt 84
Query: 61 ggcaaatcagatgaaccaaggaatcaacaatattcccataccaacagtacaagcaagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ggcaaatcagatgaaccaaggaatcaacaatattcccataccaacagtacaagcaagtta 144
Query: 121 ccagcactttggcaacctagacatcagaaaaccaaaccagttatatggtttgctgcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ccagcactttggcaacctagacatcagaaaaccaaaccagttatatggtttgctgcagtt 204
Query: 181 ctgtgcttgatattcagccttgtacttatcttctttggaattgcaacattaatcatctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctgtgcttgatattcagccttgtacttatcttctttggaattgcaacattaatcatctac 264
Query: 241 ctttccttcaagccaagaaaccccatatttgacattcccaatgcaagcctcaatgttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttccttcaagccaagaaaccccatatttgacattcccaatgcaagcctcaatgttgtt 324
Query: 301 tattttgactcaacaagttacctcaatggtgaattcgccttccttgcaaatttcactaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattttgactcaacaagttacctcaatggtgaattcgccttccttgcaaatttcactaac 384
Query: 361 cccaacagtagaattcatgtgaggtttgagtccttgaagattgagcttttcttctcagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccaacagtagaattcatgtgaggtttgagtccttgaagattgagcttttcttctcagac 444
Query: 421 aggctcatctcatcacaatcaatcaagccttttactcagaggccaaggg 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggctcatctcatcacaatcaatcaagccttttactcagaggccaaggg 493
>gnl|LJGI|TC76983
Length = 661
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 476 ggttgcaatcggtgaagctcatgtccaacttgatgttcttgcctcaagatgttggtgtga 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttgcaatcggtgaagctcatgtccaacttgatgttcttgcctcaagatgttggtgtga 60
Query: 536 agcttcaagggcaggtgcagagcaacagggtcaactactatgcaaggggaacctataagg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcttcaagggcaggtgcagagcaacagggtcaactactatgcaaggggaacctataagg 120
Query: 596 tgaggttcaacatgggtcatatccatttatctcactggttgcatagcgtatgccatatag 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaggttcaacatgggtcatatccatttatctcactggttgcatagcgtatgccatatag 180
Query: 656 agatgaatggtcctccaaatggtgtcctactagctagagaatgcacaacatggcgataa 714
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatgaatggtcctccaaatggtgtcctactagctagagaatgcacaacatggcgataa 239
>gnl|LJGI|FS327773 weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (76%)
Length = 806
Score = 232 bits (117), Expect = 2e-60
Identities = 348/425 (81%)
Strand = Plus / Plus
Query: 163 atatggtttgctgcagttctgtgcttgatattcagccttgtacttatcttctttggaatt 222
|||||||||||| ||||| ||||| | ||||||||||||||||| ||||||||||| ||
Sbjct: 329 atatggtttgcttcagttttgtgcctcatattcagccttgtactcatcttctttggtgtt 388
Query: 223 gcaacattaatcatctacctttccttcaagccaagaaaccccatatttgacattcccaat 282
||||| || | ||||| ||| |||| ||||||||||||| ||||||||| ||||||
Sbjct: 389 gcaactttgaccatcttcctaggaatcaaaccaagaaaccccacatttgacatccccaat 448
Query: 283 gcaagcctcaatgttgtttattttgactcaacaagttacctcaatggtgaattcgccttc 342
|||| |||||||| | | ||||||||||| || ||| |||||||||| ||| || ||
Sbjct: 449 gcaaacctcaatgctttgtattttgactccccacaatacttcaatggtgacttcaccctc 508
Query: 343 cttgcaaatttcactaaccccaacagtagaattcatgtgaggtttgagtccttgaagatt 402
||||| |||||||| |||||||||| | |||| ||||||| |||||||| ||| | |||
Sbjct: 509 cttgccaatttcaccaaccccaacaccaaaattgatgtgagctttgagtctttggatatt 568
Query: 403 gagcttttcttctcagacaggctcatctcatcacaatcaatcaagccttttactcagagg 462
||||||||||||||||||||| |||| ||||| || || ||| |||| ||||||||||||
Sbjct: 569 gagcttttcttctcagacaggatcatatcatcgcagtcgatcgagccgtttactcagagg 628
Query: 463 ccaagggaaaccaggttgcaatcggtgaagctcatgtccaacttgatgttcttgcctcaa 522
|||||||| |||||||||||| || | |||| || | ||| |||| |||||| |
Sbjct: 629 agaagggaaagcaggttgcaatcactgcacttcatatcaagtttggtgtttttgcctaag 688
Query: 523 gatgttggtgtgaagcttcaagggcaggtgcagagcaacagggtcaactactatgcaagg 582
||| ||||||||| |||| || |||||||||||| ||| |||||| ||| ||| |||
Sbjct: 689 gatcttggtgtgatgcttgaaaagcaggtgcagagtaacttggtcaattacaatgtaaga 748
Query: 583 ggaac 587
|||||
Sbjct: 749 ggaac 753
>gnl|LJGI|BP057466 weakly similar to UniRef100_A7QQD5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 337
Score = 151 bits (76), Expect = 7e-36
Identities = 153/179 (85%)
Strand = Plus / Minus
Query: 534 gaagcttcaagggcaggtgcagagcaacagggtcaactactatgcaaggggaacctataa 593
|||||||||| | ||| ||||||||||||||||||| | | ||||||||||||| | |||
Sbjct: 335 gaagcttcaatgncagatgcagagcaacagggtcaatttcaatgcaaggggaacatttaa 276
Query: 594 ggtgaggttcaacatgggtcatatccatttatctcactggttgcatagcgtatgccatat 653
|| | ||| |||||| |||| ||||||||||||| |||||||||||| | ||||||| |
Sbjct: 275 ggcggggtacaacataggtcttatccatttatcttactggttgcatatcatatgccagaa 216
Query: 654 agagatgaatggtcctccaaatggtgtcctactagctagagaatgcacaacatggcgat 712
|||||||| | ||||||||| |||||| ||| |||||||| |||| ||||||||||||
Sbjct: 215 agagatgactagtcctccaactggtgttctattagctagactatgctcaacatggcgat 157