Miyakogusa Predicted Gene

Lj2g3v3058550.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M733_SOYBN 2093 87.5 90.7 (tr|I1M733) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G13370.1 1660 72.6 80.3 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544601-5555543 REVERSE LENGTH=1724
Medicago Medtr3g053910.1 1868 79.4 86.2 | chromodomain helicase DNA-binding protein, putative | HC | chr3:16763046-16784207 | 20130731
Soybean Glyma14g03780.1 2088 87.3 90.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v3058550.2 length: 1166 aa.
IPR000330 SNF2-related
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00176 SNF2_N 4.4e-77 37-323
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.5e-15 385-464
HMMSmart SM00490 helicase 5.2e-25 380-464
ProfileScan PS51194 HELICASE_CTER 19.487 354-505
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.7e-35 30-229
ProfileScan PS51192 HELICASE_ATP_BIND_1 22.757 46-218
IPR025260 Domain of unknown function DUF4208
HMMPfam PF13907 DUF4208 8.1e-21 938-1037
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.7e-71 258-540
23-255
no_ID  
Coil coil coiled-coil NA 494-515
548-569
Gene3D G3DSA:3.40.50.300 no description 2.9e-27 31-215
340-501
HMMPanther PTHR10799 SWI/SNF-RELATED 2.6e-271 20-860
Seg seg seg NA 501-517
560-573
636-647
704-721
Wolf-PSORT
Lj2g3v3058550.2	cyto 7, nucl 5, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v3058550.2