Miyakogusa Predicted Gene
- Lj2g3v3058550.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3058550.2 Non Chatacterized Hit- tr|I1M733|I1M733_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33527
PE,91.12,0,coiled-coil,NULL; SNF2_N,SNF2-related; DUF4208,Domain of
unknown function DUF4208; Helicase_C,Helica,CUFF.39662.2
(1166 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 1660 0.0
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 511 e-145
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 461 e-129
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 460 e-129
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 454 e-127
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 454 e-127
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 454 e-127
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 453 e-127
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 453 e-127
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 433 e-121
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 432 e-121
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 416 e-116
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 391 e-108
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 391 e-108
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 391 e-108
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 374 e-103
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 363 e-100
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 359 7e-99
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 347 2e-95
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 346 6e-95
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 295 1e-79
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 244 3e-64
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 238 2e-62
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 235 2e-61
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 229 7e-60
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 226 6e-59
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 226 7e-59
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 222 1e-57
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 214 2e-55
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 214 4e-55
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 177 4e-44
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 172 1e-42
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 172 1e-42
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 172 1e-42
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 139 1e-32
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 136 1e-31
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 131 3e-30
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 113 7e-25
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 112 1e-24
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 111 2e-24
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 106 9e-23
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 104 3e-22
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 101 3e-21
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 100 5e-21
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 99 2e-20
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 91 6e-18
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 89 1e-17
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 87 8e-17
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 86 2e-16
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 86 2e-16
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 85 4e-16
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 85 4e-16
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 84 6e-16
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 84 8e-16
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 74 5e-13
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 71 4e-12
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 59 2e-08
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 58 3e-08
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 58 3e-08
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 54 1e-06
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 1660 bits (4298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1165 (72%), Positives = 935/1165 (80%), Gaps = 39/1165 (3%)
Query: 1 MSVQGKMVDFQRKKSKASLRKLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADE 60
++VQGKMV+ QR K KASLRKL++QPEWL GG LRDYQLEGLNFLVNSW NDTNVILADE
Sbjct: 592 IAVQGKMVEQQRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADE 651
Query: 61 MGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRAS 120
MGLGKTVQSVSMLGFLQN QQI GPFLVVVPLSTL+NWAKEFRKWLP MNIIVYVGTRAS
Sbjct: 652 MGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRAS 711
Query: 121 REVCQQYEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQ 180
REVCQQYEFYN+KK G+PIKFNALLTTYEVVLKDKAVLSKI+W YLMVDEAHRLKNSEAQ
Sbjct: 712 REVCQQYEFYNEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQ 771
Query: 181 LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKE 240
LYT L EFSTKNKLLITGTPLQNSVEELWALLHFLDP KFK+KD+FV+NYKNLSSFNE E
Sbjct: 772 LYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESE 831
Query: 241 LANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVR 300
LANLH+ELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFH+LNKGVR
Sbjct: 832 LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVR 891
Query: 301 GNQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLV 360
GNQVSLLNIVVELKKCCNHPFLFESADHGYGG NDNSKL++I+ SSGKLVILDKLLV
Sbjct: 892 GNQVSLLNIVVELKKCCNHPFLFESADHGYGG--DINDNSKLDKIILSSGKLVILDKLLV 949
Query: 361 RLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDF 420
RL ETKHRVLIFSQMVR+LDIL EY+SLRGFQFQRLDGSTKAELRQQAMDHFNAP SDDF
Sbjct: 950 RLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDF 1009
Query: 421 CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV 480
CFLLSTRAGGLGINLATADTV+IFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV
Sbjct: 1010 CFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV 1069
Query: 481 EEDILERAKKKMVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEE 540
EE+ILERAK+KMVLDHLVIQ S FDKNELSAILRFGAEELFKE+
Sbjct: 1070 EEEILERAKRKMVLDHLVIQ-KLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKED 1128
Query: 541 RNDEESKKRLLSMDIDEILXXXXXXXXXXXXXXQGDELLGAFKVANFSNDEDDASFWSRW 600
+NDEESKKRLLSMDIDEIL + ELLGAFKVANF N EDD SFWSRW
Sbjct: 1129 KNDEESKKRLLSMDIDEILERAEQVEEKHTDETE-HELLGAFKVANFCNAEDDGSFWSRW 1187
Query: 601 IKPDAVYQAEEALVPRSARNIKSYAEADPCERSNNXXXXXXX--XXXXXVQKRRKAEYSA 658
IKPD+V AEEAL PR+ARN KSY + +R++ QKRRK EY
Sbjct: 1188 IKPDSVVTAEEALAPRAARNTKSYVDPSHPDRTSKRKKKGSEPPEHTERSQKRRKTEYFV 1247
Query: 659 PVVPMIEGASAQVRSWSYGNLSKRDALRFSRAVMKYGNENQVDLIXXXXXXXXXXXXXXX 718
P P++EG SAQVR WSYGNL KRDA RF R VMK+GN NQ+ I
Sbjct: 1248 PSTPLLEGTSAQVRGWSYGNLPKRDAQRFYRTVMKFGNHNQMACIAEEVGGVVEAAPEEA 1307
Query: 719 XXXLFSALIDGCTEAVELGNLDLKGPLLDFFGVPVKANDLLTRVQELQLLAKRISRYEDP 778
LF ALIDGC E+VE GN + KGP+LDFFGVPVKAN+LL RVQ LQLL+KRISRY DP
Sbjct: 1308 QVELFDALIDGCKESVETGNFEPKGPVLDFFGVPVKANELLKRVQGLQLLSKRISRYNDP 1367
Query: 779 IAQFRVLSYLKPSNWSKGCGWNQIDDARLLLGIHYYGFGNWEKIRLDERLGLTKKIAPVE 838
I+QFRVLSYLKPSNWSKGCGWNQIDDARLLLGI Y+GFGNWEKIRLDE LGLTKKIAPVE
Sbjct: 1368 ISQFRVLSYLKPSNWSKGCGWNQIDDARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVE 1427
Query: 839 LLHHETFLPRAPNLRDRANALLEQELAVLGVKHTNNRVGRKPSKKEREQM-NTSLLRGQE 897
L HHETFLPRAPNL++RA ALLE ELA G K+TN + RK SKK ++ + N ++
Sbjct: 1428 LQHHETFLPRAPNLKERATALLEMELAAAGGKNTNAKASRKNSKKVKDNLINQFKAPARD 1487
Query: 898 KK-KAGSVKVDVQMRKNRFQKTQKVEPIAKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVE 956
++ K+G V + K+ +KTQK EP+ KEEGEMSD+ EVYEQFKE KWMEWC+DV+ +
Sbjct: 1488 RRGKSGPANVSLLSTKDGPRKTQKAEPLVKEEGEMSDDGEVYEQFKEQKWMEWCEDVLAD 1547
Query: 957 EMKTLKRLHRLQTTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTVRLW 1016
E+KTL RL RLQTTSA+LPKEKVL KIR YL++LGRRID IVLEHEE+ YKQDRMT+RLW
Sbjct: 1548 EIKTLGRLQRLQTTSADLPKEKVLFKIRRYLEILGRRIDAIVLEHEEDLYKQDRMTMRLW 1607
Query: 1017 KYVSTFSHLSGERLHQIYS-KLKKEQEEAGVGPSHVNGSASVSFGRNGNPIHHHMERQRG 1075
YVSTFS+LSG+RL+QIYS ++++EE GVGPSH+NGS + +RQ+
Sbjct: 1608 NYVSTFSNLSGDRLNQIYSKLKQEKEEEEGVGPSHLNGS-------------RNFQRQQK 1654
Query: 1076 LKNMTSYQLPESVSS--NTGKSEAWKRRRRAESEDHFQVPPQRSTSSGVQITDPNSLGIL 1133
K + Q + V +T K EAWKRRRR E++ V +R T IT+ NSLGIL
Sbjct: 1655 FKTAGNSQGSQQVHKGIDTAKFEAWKRRRRTEND----VQTERPT-----ITNSNSLGIL 1705
Query: 1134 GAGPSDKRFVSEKPYRTQPGGVPLR 1158
G GP D + +R + G P R
Sbjct: 1706 GPGPLD------RSHRARQTGFPPR 1724
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 511 bits (1317), Expect = e-145, Method: Compositional matrix adjust.
Identities = 328/896 (36%), Positives = 482/896 (53%), Gaps = 108/896 (12%)
Query: 9 DFQRKKSKASLRKLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQ 68
D K++ ++ + PE+LKG L YQLEGLNFL SW T+VILADEMGLGKT+Q
Sbjct: 249 DVDHKRNPRDFQQFDHTPEFLKG-LLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQ 307
Query: 69 SVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYE 128
S+++L L I P LV+ PLSTL NW +EF W P MN+++Y GT +R V +++E
Sbjct: 308 SIALLASLFEENLI--PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHE 365
Query: 129 FY----------------NDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAH 172
FY + + K IKF+ LLT+YE++ D AVL I+W ++VDE H
Sbjct: 366 FYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGH 425
Query: 173 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKN 232
RLKN +++L+++L+++S+ +++L+TGTPLQN+++EL+ L+HFLD KF S ++F + +K+
Sbjct: 426 RLKNKDSKLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD 485
Query: 233 LSSFNEKELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 292
++ E++++ LH L PH+LRRV KDV K +PPK E ILRV++S LQK+YYK I RN+
Sbjct: 486 INQ--EEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNY 543
Query: 293 HNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKL 352
L K G Q+SL NI++EL+K C HP++ E + A N ++++ S GKL
Sbjct: 544 QVLTKK-GGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDA-----NEAFKQLLESCGKL 597
Query: 353 VILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHF 412
+LDK++V+L E HRVLI++Q +LD+L +Y + + +Q++R+DG RQ +D F
Sbjct: 598 QLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRF 657
Query: 413 NAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIY 472
NA S+ FCFLLSTRAGGLGINLATADTVII+DSDWNP DLQAM+RAHR+GQ V IY
Sbjct: 658 NAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIY 717
Query: 473 RFVTSKSVEEDILERAKKKMVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFG 532
R + ++EE +++ KKKMVL+HLV+ ++ EL I+R+G
Sbjct: 718 RLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQN-------------INQEELDDIIRYG 764
Query: 533 AEELFKEERNDEESKKRLLSMD---IDEILXXX-XXXXXXXXXXXQGDELLGAFKVANF- 587
++ELF E +DE K + D ID++L + + L AFKVANF
Sbjct: 765 SKELFASE-DDEAGKSGKIHYDDAAIDKLLDRDLVEAEEVSVDDEEENGFLKAFKVANFE 823
Query: 588 ----------------------SNDEDDASFWSRWIKPD-AVYQAEEALV----PRSARN 620
+ + D AS+W +K ++QAEE RS +
Sbjct: 824 YIDENEAAALEAQRVAAESKSSAGNSDRASYWEELLKDKFELHQAEELNALGKRKRSRKQ 883
Query: 621 IKSYAEADPC---------ERSNNXXXXXXXXXXXXVQK-----RRKAEYSAPVVPMIEG 666
+ S E D + S VQ RRK + P++EG
Sbjct: 884 LVSIEEDDLAGLEDVSSDGDESYEAESTDGEAAGQGVQTGRRPYRRKGRDNLEPTPLMEG 943
Query: 667 ASAQVRSWSYGNLSKRDALRFSRAVMKYGNENQVDLIXXXXXXXXXXXXXXXXXXLFSAL 726
R + N S+R F + +M+YG N LF
Sbjct: 944 EGRSFRVLGF-NQSQRAI--FVQTLMRYGAGNFDWKEFVPRLKQKTFEEINEYGILFLKH 1000
Query: 727 IDGCTEAVELGNLDLKGPLLDFFGVP---VKANDLLTRVQELQLLAKRISRYED----PI 779
I +D P GVP ++ D+L R+ L L+ +++ ED P+
Sbjct: 1001 I--------AEEIDENSPTFS-DGVPKEGLRIEDVLVRIALLILVQEKVKFVEDHPGKPV 1051
Query: 780 AQFRVLSYLKPSNWSKGCGWNQIDDARLLLGIHYYGFGNWEKIRLDERLGLTKKIA 835
R+L G W + D ++ + +G+G W+ I D+ LG+ + I
Sbjct: 1052 FPSRILERF--PGLRSGKIWKEEHDKIMIRAVLKHGYGRWQAIVDDKELGIQELIC 1105
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/587 (42%), Positives = 373/587 (63%), Gaps = 41/587 (6%)
Query: 11 QRKKSKASLRKLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV 70
+ ++++ ++ + PE+L G L YQLEGLNFL SW TNVILADEMGLGKT+QS+
Sbjct: 203 ENERNREEFKQFDLTPEFLTGT-LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSI 261
Query: 71 SMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFY 130
+ L L ++ P LVV PLST+ NW +EF W P MN+++Y G +R+V ++EFY
Sbjct: 262 AFLASL--FEENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFY 319
Query: 131 NDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFST 190
+ G+ KF+ LLTTYE+V +VLS I+W +++DE HRLKN +++LY++LS+F++
Sbjct: 320 FSE--GRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTS 377
Query: 191 KNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELANLHMELRP 250
K+ +L+TGTPLQN++ EL+AL+HFLD DKF S + F K E++++ LH L P
Sbjct: 378 KHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQDINK------EEQISRLHQMLAP 431
Query: 251 HILRRVIKDVEKS-LPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNI 309
H+LRR+ KDV K +PPK E ILRV+MS QK+ YK ++ N+ L K R ++S N+
Sbjct: 432 HLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKK-RDAKIS--NV 488
Query: 310 VVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRV 369
+++L++ C+HP+L + + A N +++ +SGKL +LDK++V+L E HRV
Sbjct: 489 LMKLRQVCSHPYLLPDFEPRFEDA-----NEAFTKLLEASGKLQLLDKMMVKLKEQGHRV 543
Query: 370 LIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAG 429
LI++Q L +L +Y + + + ++R+DG RQ +D FNA S+ FCFLLSTRAG
Sbjct: 544 LIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAG 603
Query: 430 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 489
G+GINLATADTVII+DSDWNP DLQAM+R HR+GQ V IYR + +VEE ++E K
Sbjct: 604 GIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK 663
Query: 490 KKMVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKR 549
KM+L+HLV+ + ++EL I+++G++ELF EE NDE +
Sbjct: 664 NKMLLEHLVV----------------GKQHLCQDELDDIIKYGSKELFSEE-NDEAGRSG 706
Query: 550 LLSMD---IDEILXXXXXXXXXXXXXXQGD-ELLGAFKVANFSNDED 592
+ D I+++L + + + L FKVA+F +D
Sbjct: 707 KIHYDDAAIEQLLDRNHVDAVEVSLDDEEETDFLKNFKVASFEYVDD 753
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/587 (42%), Positives = 373/587 (63%), Gaps = 41/587 (6%)
Query: 11 QRKKSKASLRKLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSV 70
+ ++++ ++ + PE+L G L YQLEGLNFL SW TNVILADEMGLGKT+QS+
Sbjct: 162 ENERNREEFKQFDLTPEFLTGT-LHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSI 220
Query: 71 SMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFY 130
+ L L ++ P LVV PLST+ NW +EF W P MN+++Y G +R+V ++EFY
Sbjct: 221 AFLASL--FEENLSPHLVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFY 278
Query: 131 NDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFST 190
+ G+ KF+ LLTTYE+V +VLS I+W +++DE HRLKN +++LY++LS+F++
Sbjct: 279 FSE--GRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTS 336
Query: 191 KNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELANLHMELRP 250
K+ +L+TGTPLQN++ EL+AL+HFLD DKF S + F K E++++ LH L P
Sbjct: 337 KHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQDINK------EEQISRLHQMLAP 390
Query: 251 HILRRVIKDVEKS-LPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNI 309
H+LRR+ KDV K +PPK E ILRV+MS QK+ YK ++ N+ L K R ++S N+
Sbjct: 391 HLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKK-RDAKIS--NV 447
Query: 310 VVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRV 369
+++L++ C+HP+L + + A N +++ +SGKL +LDK++V+L E HRV
Sbjct: 448 LMKLRQVCSHPYLLPDFEPRFEDA-----NEAFTKLLEASGKLQLLDKMMVKLKEQGHRV 502
Query: 370 LIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAG 429
LI++Q L +L +Y + + + ++R+DG RQ +D FNA S+ FCFLLSTRAG
Sbjct: 503 LIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAG 562
Query: 430 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 489
G+GINLATADTVII+DSDWNP DLQAM+R HR+GQ V IYR + +VEE ++E K
Sbjct: 563 GIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITK 622
Query: 490 KKMVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKR 549
KM+L+HLV+ + ++EL I+++G++ELF EE NDE +
Sbjct: 623 NKMLLEHLVV----------------GKQHLCQDELDDIIKYGSKELFSEE-NDEAGRSG 665
Query: 550 LLSMD---IDEILXXXXXXXXXXXXXXQGD-ELLGAFKVANFSNDED 592
+ D I+++L + + + L FKVA+F +D
Sbjct: 666 KIHYDDAAIEQLLDRNHVDAVEVSLDDEEETDFLKNFKVASFEYVDD 712
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/540 (44%), Positives = 351/540 (65%), Gaps = 34/540 (6%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
+L QP ++G ++RDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
I+GP +VV P STL NW E R++ P + + ++G R ++ K
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------- 288
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 200
F+ +T++E+ +K+K L + W Y+++DEAHR+KN + L T+ FST +LLITGTP
Sbjct: 289 FDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 201 LQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELAN-LHMELRPHILRRVIKD 259
LQN++ ELWALL+FL P+ F S + F + ++ +++E+ LH LRP +LRR+ D
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 408
Query: 260 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNH 319
VEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L+KCCNH
Sbjct: 409 VEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG--GERKRLLNIAMQLRKCCNH 466
Query: 320 PFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLL 379
P+LF+ A+ G +G + ++ ++GK+V+LDKLL +L E RVLIFSQM RLL
Sbjct: 467 PYLFQGAEPGPPYTTG-------DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLL 519
Query: 380 DILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATAD 439
DIL +Y+ RG+ + R+DG+T + R +++ +N PGS+ F FLLSTRAGGLGINLATAD
Sbjct: 520 DILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATAD 579
Query: 440 TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++EE ++ERA KK+ LD LVI
Sbjct: 580 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVI 639
Query: 500 QXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEIL 559
Q +K+EL ++R+GAE +F + + + DID I+
Sbjct: 640 QQGRLAEQKT----------VNKDELLQMVRYGAEMVFSSKDST------ITDEDIDRII 683
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/540 (44%), Positives = 351/540 (65%), Gaps = 34/540 (6%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
+L QP ++G ++RDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
I+GP +VV P STL NW E R++ P + + ++G R ++ K
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------- 288
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 200
F+ +T++E+ +K+K L + W Y+++DEAHR+KN + L T+ FST +LLITGTP
Sbjct: 289 FDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 201 LQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELAN-LHMELRPHILRRVIKD 259
LQN++ ELWALL+FL P+ F S + F + ++ +++E+ LH LRP +LRR+ D
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 408
Query: 260 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNH 319
VEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L+KCCNH
Sbjct: 409 VEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG--GERKRLLNIAMQLRKCCNH 466
Query: 320 PFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLL 379
P+LF+ A+ G +G + ++ ++GK+V+LDKLL +L E RVLIFSQM RLL
Sbjct: 467 PYLFQGAEPGPPYTTG-------DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLL 519
Query: 380 DILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATAD 439
DIL +Y+ RG+ + R+DG+T + R +++ +N PGS+ F FLLSTRAGGLGINLATAD
Sbjct: 520 DILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATAD 579
Query: 440 TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++EE ++ERA KK+ LD LVI
Sbjct: 580 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVI 639
Query: 500 QXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEIL 559
Q +K+EL ++R+GAE +F + + + DID I+
Sbjct: 640 QQGRLAEQKT----------VNKDELLQMVRYGAEMVFSSKDST------ITDEDIDRII 683
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/540 (44%), Positives = 351/540 (65%), Gaps = 34/540 (6%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
+L QP ++G ++RDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 177 RLLTQPSCIQG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
I+GP +VV P STL NW E R++ P + + ++G R ++ K
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------- 288
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 200
F+ +T++E+ +K+K L + W Y+++DEAHR+KN + L T+ FST +LLITGTP
Sbjct: 289 FDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 348
Query: 201 LQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELAN-LHMELRPHILRRVIKD 259
LQN++ ELWALL+FL P+ F S + F + ++ +++E+ LH LRP +LRR+ D
Sbjct: 349 LQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 408
Query: 260 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNH 319
VEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L+KCCNH
Sbjct: 409 VEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG--GERKRLLNIAMQLRKCCNH 466
Query: 320 PFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLL 379
P+LF+ A+ G +G + ++ ++GK+V+LDKLL +L E RVLIFSQM RLL
Sbjct: 467 PYLFQGAEPGPPYTTG-------DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLL 519
Query: 380 DILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATAD 439
DIL +Y+ RG+ + R+DG+T + R +++ +N PGS+ F FLLSTRAGGLGINLATAD
Sbjct: 520 DILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATAD 579
Query: 440 TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++EE ++ERA KK+ LD LVI
Sbjct: 580 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVI 639
Query: 500 QXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEIL 559
Q +K+EL ++R+GAE +F + + + DID I+
Sbjct: 640 QQGRLAEQKT----------VNKDELLQMVRYGAEMVFSSKDST------ITDEDIDRII 683
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/540 (45%), Positives = 351/540 (65%), Gaps = 34/540 (6%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
+L QP ++G +LRDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 182 RLLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
I+GP +VV P STL NW E R++ P + + ++G R ++ K
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK------- 293
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 200
F+ +T++E+ +K+K L + W Y+++DEAHR+KN + L T+ FST +LLITGTP
Sbjct: 294 FDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 201 LQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELAN-LHMELRPHILRRVIKD 259
LQN++ ELWALL+FL P+ F S + F + ++ +++E+ LH LRP +LRR+ D
Sbjct: 354 LQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 413
Query: 260 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNH 319
VEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L+KCCNH
Sbjct: 414 VEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG--GERKRLLNIAMQLRKCCNH 471
Query: 320 PFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLL 379
P+LF+ A+ G +G + +V ++GK+V+LDKLL +L + RVLIFSQM RLL
Sbjct: 472 PYLFQGAEPGPPYTTGDH-------LVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLL 524
Query: 380 DILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATAD 439
DIL +Y+ RG+Q+ R+DG+T + R +++ +N PGS+ F FLLSTRAGGLGINLATAD
Sbjct: 525 DILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATAD 584
Query: 440 TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++E ++ERA KK+ LD LVI
Sbjct: 585 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVI 644
Query: 500 QXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEIL 559
Q +K+EL ++R+GAE +F + + + DID I+
Sbjct: 645 QQGRLAEQKT----------VNKDELLQMVRYGAEMVFSSKDST------ITDEDIDRII 688
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/540 (45%), Positives = 351/540 (65%), Gaps = 34/540 (6%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
+L QP ++G +LRDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+L +L +
Sbjct: 182 RLLTQPACIQG-KLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 240
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
I+GP +VV P STL NW E R++ P + + ++G R ++ K
Sbjct: 241 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK------- 293
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 200
F+ +T++E+ +K+K L + W Y+++DEAHR+KN + L T+ FST +LLITGTP
Sbjct: 294 FDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTP 353
Query: 201 LQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELAN-LHMELRPHILRRVIKD 259
LQN++ ELWALL+FL P+ F S + F + ++ +++E+ LH LRP +LRR+ D
Sbjct: 354 LQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSD 413
Query: 260 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNH 319
VEK LPPK E IL+V MS +QKQYYK +L+++ +N G G + LLNI ++L+KCCNH
Sbjct: 414 VEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG--GERKRLLNIAMQLRKCCNH 471
Query: 320 PFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLL 379
P+LF+ A+ G +G + +V ++GK+V+LDKLL +L + RVLIFSQM RLL
Sbjct: 472 PYLFQGAEPGPPYTTG-------DHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLL 524
Query: 380 DILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATAD 439
DIL +Y+ RG+Q+ R+DG+T + R +++ +N PGS+ F FLLSTRAGGLGINLATAD
Sbjct: 525 DILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATAD 584
Query: 440 TVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++E ++ERA KK+ LD LVI
Sbjct: 585 VVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKKLALDALVI 644
Query: 500 QXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEIL 559
Q +K+EL ++R+GAE +F + + + DID I+
Sbjct: 645 QQGRLAEQKT----------VNKDELLQMVRYGAEMVFSSKDST------ITDEDIDRII 688
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/491 (47%), Positives = 318/491 (64%), Gaps = 29/491 (5%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
K+ +QP L+GG LR YQLEGL ++V+ + ND N ILADEMGLGKT+Q+++++ +L ++
Sbjct: 373 KVTKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESK 432
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
+HGP L++ P + L NW EF W P ++ +Y G++ R E GK
Sbjct: 433 DLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRT-----EIRARIAGGK--- 484
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTL-SEFSTKNKLLITGT 199
FN L+T Y+++++DKA L KI WNY++VDE HRLKN E L TL + + K +LL+TGT
Sbjct: 485 FNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGT 544
Query: 200 PLQNSVEELWALLHFLDPDKFKSKDDFVQNYK-------NLSSFNEKELA---NLHMELR 249
P+QNS++ELW+LL+FL P F S +F + + + S +E+EL LH +R
Sbjct: 545 PIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIR 604
Query: 250 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNI 309
P +LRR +VEK LP K + IL+ +MS QK YYK + + L+ G G SL N+
Sbjct: 605 PFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSG-NGKSKSLQNL 663
Query: 310 VVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRV 369
++L+KCCNHP+LF AD+ K IV +SGK +LD+LL +L + HR+
Sbjct: 664 TMQLRKCCNHPYLFVGADYNM---------CKKPEIVRASGKFELLDRLLPKLKKAGHRI 714
Query: 370 LIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAG 429
L+FSQM RL+D+L Y+SL + + RLDGSTK + R + FN P S F FLLSTRAG
Sbjct: 715 LLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAG 774
Query: 430 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 489
GLG+NL TADT+IIFDSDWNPQ D QA RAHRIGQ++ V ++ V+ S+EE ILERAK
Sbjct: 775 GLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAK 834
Query: 490 KKMVLDHLVIQ 500
+KM +D VIQ
Sbjct: 835 QKMGIDAKVIQ 845
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/491 (46%), Positives = 317/491 (64%), Gaps = 28/491 (5%)
Query: 21 KLEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQ 80
K+ +QP L+GG LR YQLEGL ++V+ + N+ N ILADEMGLGKT+Q++S++ +L +
Sbjct: 390 KVTEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENK 449
Query: 81 QIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIK 140
+ GP+L+V P + L NW EF W+P + +Y G R+ ++ K K
Sbjct: 450 GVPGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIRE-------KIAGEGK 502
Query: 141 FNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTL-SEFSTKNKLLITGT 199
FN L+T Y+++++DKA L KI W Y++VDE HRLKN E+ L TL + + K +LL+TGT
Sbjct: 503 FNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGT 562
Query: 200 PLQNSVEELWALLHFLDPDKFKSKDDFVQNYK-------NLSSFNEKELA---NLHMELR 249
P+QNS++ELW+LL+FL P F S +F + + N+S +E+EL LH +R
Sbjct: 563 PIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIR 622
Query: 250 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNI 309
P ILRR +VEK LP K + IL+ +MS QK YYK + + L G G SL N+
Sbjct: 623 PFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTG-SGKSKSLQNL 681
Query: 310 VVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRV 369
++L+KCCNHP+LF D+ K IV +SGK +LD+LL +L + HR+
Sbjct: 682 TMQLRKCCNHPYLFVGGDYNMW---------KKPEIVRASGKFELLDRLLPKLRKAGHRI 732
Query: 370 LIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAG 429
L+FSQM RL+D+L Y++L +++ RLDG+TK + R + FN P S F FLLSTRAG
Sbjct: 733 LLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAG 792
Query: 430 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAK 489
GLG+NL TADTVIIFDSDWNPQ D QA RAHRIGQ++ V ++ V+ SVEE ILERAK
Sbjct: 793 GLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAK 852
Query: 490 KKMVLDHLVIQ 500
+KM +D VIQ
Sbjct: 853 QKMGIDAKVIQ 863
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/528 (44%), Positives = 330/528 (62%), Gaps = 37/528 (7%)
Query: 22 LEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
L +QP+ L+GG L +QLE LN+L W NVILADEMGLGKTV + + L L
Sbjct: 677 LTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFG 736
Query: 82 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPG---KP 138
+ P LV+VPLST+ NW EF W P +N++ Y G+ R + + YE++ G KP
Sbjct: 737 VARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKP 796
Query: 139 I--KFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLI 196
KFN LLTTYE+VL D + L + W L+VDE HRLKNSE++L++ L+ FS ++++L+
Sbjct: 797 TSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLL 856
Query: 197 TGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELANLHMELRPHILRRV 256
TGTPLQN++ E++ LL+FL P F S F + + +L+S + E L + PH+LRR+
Sbjct: 857 TGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEKVE--ELKKLVAPHMLRRL 914
Query: 257 IKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFH---NLNKGVRGNQVSLLNIVVEL 313
KD +++PPK ER++ VE++ +Q +YY+ +L +N+ N+ KGV Q S+LNIV++L
Sbjct: 915 KKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVA--QQSMLNIVMQL 972
Query: 314 KKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFS 373
+K CNHP+L + G +D + +S KL +L +L LH+ HRVLIFS
Sbjct: 973 RKVCNHPYLIPGTEPESGSLEFLHDMR-----IKASAKLTLLHSMLKVLHKEGHRVLIFS 1027
Query: 374 QMVRLLDILGEYMSLR--GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGL 431
QM +LLDIL +Y+++ F+R+DGS RQ A+ FN + F FLLSTRA GL
Sbjct: 1028 QMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQ-DKNRFVFLLSTRACGL 1086
Query: 432 GINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKK 491
GINLATADTVII+DSD+NP D+QAM+RAHRIGQ + + +YR V SVEE IL+ AKKK
Sbjct: 1087 GINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKK 1146
Query: 492 MVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKE 539
++LD L + + E ILR+G EELF +
Sbjct: 1147 LMLDQLFVNKSGS-----------------QKEFEDILRWGTEELFND 1177
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/544 (40%), Positives = 313/544 (57%), Gaps = 51/544 (9%)
Query: 22 LEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+ +QP L GG+LR+YQ+ GL +LV+ + N N ILADEMGLGKTVQ +S++ +L +
Sbjct: 742 INEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKN 801
Query: 82 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKF 141
GPFLVVVP S L W E W P ++ IVY GT R + + + K F
Sbjct: 802 DRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK-------F 854
Query: 142 NALLTTYEVVLK--DKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 199
N LLTTYE ++ D+ LSKI W+Y+++DE HR+KN+ +L L + + ++LL+TGT
Sbjct: 855 NVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGT 914
Query: 200 PLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKE---------------LANL 244
PLQN++EELWALL+FL P+ F S +DF Q + N + + L
Sbjct: 915 PLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRL 974
Query: 245 HMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQV 304
H LRP +LRR+ VE LP KIER++R E S Y K +++R NL
Sbjct: 975 HQVLRPFVLRRLKHKVENELPEKIERLIRCEAS----AYQKLLMKRVEDNLGSIGNAKSR 1030
Query: 305 SLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSK--LERIVFSSGKLVILDKLLVRL 362
++ N V+EL+ CNHP+L + +N K L IV GKL +LD++L +L
Sbjct: 1031 AVHNSVMELRNICNHPYLSQ-----LHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKL 1085
Query: 363 HETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCF 422
T HRVL FS M RLLD++ +Y++L+G+++ RLDG T R +D FN GS F F
Sbjct: 1086 KATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIF 1145
Query: 423 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEE 482
LLS RAGG+G+NL ADTVI+FD+DWNPQ DLQA +RAHRIGQ++ V + RF T SVEE
Sbjct: 1146 LLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEE 1205
Query: 483 DILERAKKKMVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEERN 542
+ A+ K+ + + I +FD N + + E L +E +
Sbjct: 1206 QVRASAEHKLGVANQSI----------------TAGFFDNNTSAEDRKEYLESLLRESKK 1249
Query: 543 DEES 546
+E++
Sbjct: 1250 EEDA 1253
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/546 (41%), Positives = 316/546 (57%), Gaps = 55/546 (10%)
Query: 22 LEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+ +QP L GG+LR+YQ+ GL +LV+ + N N ILADEMGLGKTVQ +S++ +L +
Sbjct: 742 INEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKN 801
Query: 82 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKF 141
GPFLVVVP S L W E W P ++ IVY GT R + + + K F
Sbjct: 802 DRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK-------F 854
Query: 142 NALLTTYEVVLK--DKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 199
N LLTTYE ++ D+ LSKI W+Y+++DE HR+KN+ +L L + + ++LL+TGT
Sbjct: 855 NVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGT 914
Query: 200 PLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKE---------------LANL 244
PLQN++EELWALL+FL P+ F S +DF Q + N + + L
Sbjct: 915 PLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRL 974
Query: 245 HMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQV 304
H LRP +LRR+ VE LP KIER++R E S Y K +++R NL G GN
Sbjct: 975 HQVLRPFVLRRLKHKVENELPEKIERLIRCEAS----AYQKLLMKRVEDNL--GSIGNAK 1028
Query: 305 S--LLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSK--LERIVFSSGKLVILDKLLV 360
S + N V+EL+ CNHP+L + +N K L IV GKL +LD++L
Sbjct: 1029 SRAVHNSVMELRNICNHPYLSQ-----LHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLP 1083
Query: 361 RLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDF 420
+L T HRVL FS M RLLD++ +Y++L+G+++ RLDG T R +D FN GS F
Sbjct: 1084 KLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFF 1143
Query: 421 CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV 480
FLLS RAGG+G+NL ADTVI+FD+DWNPQ DLQA +RAHRIGQ++ V + RF T SV
Sbjct: 1144 IFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSV 1203
Query: 481 EEDILERAKKKMVLDHLVIQXXXXXXXXXXXXXXXXXSYFDKNELSAILRFGAEELFKEE 540
EE + A+ K+ + + I +FD N + + E L +E
Sbjct: 1204 EEQVRASAEHKLGVANQSI----------------TAGFFDNNTSAEDRKEYLESLLRES 1247
Query: 541 RNDEES 546
+ +E++
Sbjct: 1248 KKEEDA 1253
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/490 (43%), Positives = 295/490 (60%), Gaps = 35/490 (7%)
Query: 22 LEQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+ +QP L GG+LR+YQ+ GL +LV+ + N N ILADEMGLGKTVQ +S++ +L +
Sbjct: 742 INEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKN 801
Query: 82 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKF 141
GPFLVVVP S L W E W P ++ IVY GT R + + + K F
Sbjct: 802 DRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQK-------F 854
Query: 142 NALLTTYEVVLK--DKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 199
N LLTTYE ++ D+ LSKI W+Y+++DE HR+KN+ +L L + + ++LL+TGT
Sbjct: 855 NVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGT 914
Query: 200 PLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKE---------------LANL 244
PLQN++EELWALL+FL P+ F S +DF Q + N + + L
Sbjct: 915 PLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRL 974
Query: 245 HMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQV 304
H LRP +LRR+ VE LP KIER++R E S Y K +++R NL
Sbjct: 975 HQVLRPFVLRRLKHKVENELPEKIERLIRCEAS----AYQKLLMKRVEDNLGSIGNAKSR 1030
Query: 305 SLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSK--LERIVFSSGKLVILDKLLVRL 362
++ N V+EL+ CNHP+L + +N K L IV GKL +LD++L +L
Sbjct: 1031 AVHNSVMELRNICNHPYLSQ-----LHSEEVNNIIPKHFLPPIVRLCGKLEMLDRMLPKL 1085
Query: 363 HETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCF 422
T HRVL FS M RLLD++ +Y++L+G+++ RLDG T R +D FN GS F F
Sbjct: 1086 KATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIF 1145
Query: 423 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEE 482
LLS RAGG+G+NL ADTVI+FD+DWNPQ DLQA +RAHRIGQ++ V + RF T SVEE
Sbjct: 1146 LLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEE 1205
Query: 483 DILERAKKKM 492
+ A+ K+
Sbjct: 1206 QVRASAEHKL 1215
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 303/488 (62%), Gaps = 28/488 (5%)
Query: 29 LKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLV 88
L GG+L+ YQL+G+ +L++ W+N N ILAD+MGLGKT+Q++ L L+ + GP+LV
Sbjct: 197 LTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLK-GNGLDGPYLV 255
Query: 89 VVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTY 148
+ PLSTLSNW E ++ P +N I+Y G + R+ ++ P KF ++T+Y
Sbjct: 256 IAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGP----KFPIVITSY 311
Query: 149 EVVLKD-KAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEE 207
EV + D K +L W Y+++DE HRLKN + +L L NKLL+TGTPLQN++ E
Sbjct: 312 EVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSE 371
Query: 208 LWALLHFLDPDKFKSKD------DFVQNYKNLSSFNEKE------LANLHMELRPHILRR 255
LW+LL+F+ PD F S D DF + KN ++ E+E ++ LH LRP ILRR
Sbjct: 372 LWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRR 431
Query: 256 VIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF--HNLNKGVRGN--QVSLLNIVV 311
+ DVE SLP K E I+ M+ QK++ + ++ H +RG + L N+V+
Sbjct: 432 MKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVI 491
Query: 312 ELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLI 371
+L+K CNHP L + G GS +E IV GK +L++LLVRL H+VLI
Sbjct: 492 QLRKNCNHPDLLQ------GQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLI 545
Query: 372 FSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGL 431
FSQ +LLDI+ Y S +GF+ R+DGS K + R++ + F+ S FLLSTRAGGL
Sbjct: 546 FSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGL 605
Query: 432 GINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKK 491
GINL ADT I++DSDWNPQ DLQAM R HRIGQ + V++YR T++S+E +L+RA K
Sbjct: 606 GINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSK 665
Query: 492 MVLDHLVI 499
+ L+H+VI
Sbjct: 666 LKLEHVVI 673
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/479 (42%), Positives = 295/479 (61%), Gaps = 25/479 (5%)
Query: 34 LRDYQLEGLNFLVNSWRNDTNVILA-DEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPL 92
L+ +Q+EG+++L+ + NV+L D+MGLGKT+Q++S L +L+ Q + GPFLV+ PL
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 93 STLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVVL 152
S W E ++ P++ ++ YVG + R + + Y+ G + F+ LLTTY++ L
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCR-LDMRKSMYDH---GHFLPFDVLLTTYDIAL 166
Query: 153 KDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSE-FSTKNKLLITGTPLQNSVEELWAL 211
D+ LS+I W Y ++DEA RLKN + LY L E F +LLITGTP+QN++ ELWAL
Sbjct: 167 VDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWAL 226
Query: 212 LHFLDPDKFKSKDDFVQNYK----NLSSFNEKE-LANLHMELRPHILRR----VIKDVEK 262
+HF P F + D F+ +K L N+KE +L L +LRR +I+
Sbjct: 227 MHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNL 286
Query: 263 SLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRG--NQVSLLNIVVELKKCCNHP 320
LPP E + V + LQK+ Y IL + L + G N SL NIV++L+K C+HP
Sbjct: 287 VLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHP 346
Query: 321 FLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLD 380
+LF + + E +V +SGKL++LD+LL RLH++ HRVL+FSQM LD
Sbjct: 347 YLFPGIE--------PEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLD 398
Query: 381 ILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADT 440
IL ++M LR + ++RLDGS +AE R A+ +F+ GS+ F F++STRAGG+G+NL ADT
Sbjct: 399 ILQDFMELRRYSYERLDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADT 458
Query: 441 VIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
VI ++ DWNPQ D QA+ RAHRIGQ V VT SVEE IL RA++K+ L H V+
Sbjct: 459 VIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 517
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 359 bits (921), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 206/494 (41%), Positives = 296/494 (59%), Gaps = 36/494 (7%)
Query: 34 LRDYQLEGLNFLVNSWRNDTNVILA-DEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPL 92
L+ +Q+EG+++L+ + NV+L D+MGLGKT+Q++S L +L+ Q + GPFLV+ PL
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 93 STLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQ--YEFYNDKKPGKPIKFNALLTTYEV 150
S W E ++ P++ ++ YVG + R ++ Y+ G + F+ LLTTY++
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDI 170
Query: 151 VLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSE-FSTKNKLLITGTPLQNSVEELW 209
L D+ LS+I W Y ++DEA RLKN + LY L E F +LLITGTP+QN++ ELW
Sbjct: 171 ALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELW 230
Query: 210 ALLHFLDPDKFKSKDDFVQNYK-------NLSSFNEKE-LANLHMELRPHILRR----VI 257
AL+HF P F + D F+ +K L N+KE +L L +LRR +I
Sbjct: 231 ALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLI 290
Query: 258 KDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRG--NQVSLLNIVVELKK 315
+ LPP E + V + LQK+ Y IL + L + G N SL NIV++L+K
Sbjct: 291 ESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRK 350
Query: 316 CCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQM 375
C+HP+LF + + E +V +SGKL++LD+LL RLH++ HRVL+FSQM
Sbjct: 351 ACSHPYLFPGIE--------PEPFEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLFSQM 402
Query: 376 VRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAP----------GSDDFCFLLS 425
LDIL ++M LR + ++RLDGS +AE R A+ +F+A GS+ F F++S
Sbjct: 403 TSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMIS 462
Query: 426 TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL 485
TRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT SVEE IL
Sbjct: 463 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVIL 522
Query: 486 ERAKKKMVLDHLVI 499
RA++K+ L H V+
Sbjct: 523 RRAERKLQLSHNVV 536
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 347 bits (891), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/484 (41%), Positives = 289/484 (59%), Gaps = 58/484 (11%)
Query: 24 QQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIH 83
+QP L+ G LRDYQL GL ++++ + N N ILADEMGLGKTVQ ++++ +L + +
Sbjct: 971 RQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1030
Query: 84 GPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASR------EVCQQYEFYNDKKPGK 137
GP L++VP + L NW E WLP ++ I YVGT+ R EVC
Sbjct: 1031 GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCA------------ 1078
Query: 138 PIKFNALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLIT 197
+KFN L+TTYE ++ D++ LSK+ W Y+++DEA R+K+ E+ L L + + +LL+T
Sbjct: 1079 -MKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLT 1137
Query: 198 GTPLQNSVEELWALLHFLDPDKFKSK----DDFVQNYKNLSSFNEKE------------L 241
GTPLQN ++ELW+LL+ L PD F ++ D F Q ++ + E +
Sbjct: 1138 GTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVI 1197
Query: 242 ANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKG--- 298
LH L P +LRR ++DVE SLP K+ +LR MS +Q Y WI ++
Sbjct: 1198 HRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEK 1257
Query: 299 --VRGNQV-------SLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSS 349
+ N + +L N +EL+K CNHP L ++ Y ND SK + +V S
Sbjct: 1258 LRAQKNPIYQAKIYRTLNNRCMELRKACNHPLL----NYPY-----FNDFSK-DFLVRSC 1307
Query: 350 GKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAM 409
GKL ILD++L++L T HRVL+FS M +LLDIL EY+ R ++R+DG+T E R+ A+
Sbjct: 1308 GKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAI 1367
Query: 410 DHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ-QEV 468
FN P +D F FLLS RA G G+NL TADTV+I+D D NP+N+ QA++RAHRIGQ +EV
Sbjct: 1368 VDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREV 1427
Query: 469 VNIY 472
IY
Sbjct: 1428 KVIY 1431
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 346 bits (887), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/479 (42%), Positives = 290/479 (60%), Gaps = 49/479 (10%)
Query: 24 QQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIH 83
+QP L+ G LRDYQL GL ++++ + N N ILADEMGLGKTVQ ++++ +L + +
Sbjct: 971 RQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1030
Query: 84 GPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASR-EVCQQYEFYNDKKPGKPIKFN 142
GP L++VP + L NW E WLP ++ I YVGT+ R ++ Q +F KFN
Sbjct: 1031 GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQVKFE---------KFN 1081
Query: 143 ALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 202
L+TTYE ++ D++ LSK+ W Y+++DEA R+K+ E+ L L + + +LL+TGTPLQ
Sbjct: 1082 VLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQ 1141
Query: 203 NSVEELWALLHFLDPDKFKSK----DDFVQNYKNLSSFNEKE------------LANLHM 246
N ++ELW+LL+ L PD F ++ D F Q ++ + E + LH
Sbjct: 1142 NDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQ 1201
Query: 247 ELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKG-----VRG 301
L P +LRR ++DVE SLP K+ +LR MS +Q Y WI ++ +
Sbjct: 1202 ILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQK 1261
Query: 302 NQV-------SLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVI 354
N + +L N +EL+K CNHP L ++ Y ND SK + +V S GKL I
Sbjct: 1262 NPIYQAKIYRTLNNRCMELRKACNHPLL----NYPY-----FNDFSK-DFLVRSCGKLWI 1311
Query: 355 LDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNA 414
LD++L++L T HRVL+FS M +LLDIL EY+ R ++R+DG+T E R+ A+ FN
Sbjct: 1312 LDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFND 1371
Query: 415 PGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQ-QEVVNIY 472
P +D F FLLS RA G G+NL TADTV+I+D D NP+N+ QA++RAHRIGQ +EV IY
Sbjct: 1372 PDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIY 1430
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 295 bits (755), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 279/533 (52%), Gaps = 74/533 (13%)
Query: 34 LRDYQLEGLNFLVNSWRNDT-NVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPL 92
L+ YQL G+NFL+ ++ ILADEMGLGKT+Q+++ L L GP LVV P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 93 STLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVVL 152
S L NW +E RKW P ++ Y G A+R + E + K GKP FN LL Y +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHG--AARAAYSR-ELNSLSKAGKPPPFNVLLVCYSLFE 329
Query: 153 K-------DKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFS--TKNKLLITGTPLQN 203
+ D+ VL + RW+ +++DEAH LK+ + + L + +L++TGTPLQN
Sbjct: 330 RHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQN 389
Query: 204 SVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELANLHMELRPHILRRVIKDVEKS 263
+ ELW+LL F+ PD F +++ V K L++ + + + + L P ILRR+ DV +
Sbjct: 390 DLHELWSLLEFMLPDIFTTEN--VDLKKLLNAEDTELITRMKSILGPFILRRLKSDVMQQ 447
Query: 264 LPPKIERILRVEMSPLQKQYYKWILE---------------RNFHNLNKGVRGNQVSLLN 308
L PKI+R+ V M Q+ YK +E ++ ++L K + Q+S N
Sbjct: 448 LVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQIS--N 505
Query: 309 IVVELKKCCNHPFL------------------------FE-SADHGYGGASGSND----- 338
+ +K NHP L FE S D G ND
Sbjct: 506 YFTQFRKIANHPLLIRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQ 565
Query: 339 -----------NSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMS 387
+ ++ V S K L +LL + ++ HRVLIFSQ +LDIL +
Sbjct: 566 LLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLD 625
Query: 388 LRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSD 447
+ G ++RLDGST+ RQ +D FN S F LLSTRAGG G+NL ADTVII D D
Sbjct: 626 VIGVTYRRLDGSTQVTDRQTIVDTFNNDKS-IFACLLSTRAGGQGLNLTGADTVIIHDMD 684
Query: 448 WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 500
+NPQ D QA R HRIGQ + V I+R VT +V+E+I E AK+K+VLD V++
Sbjct: 685 FNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRKLVLDAAVLE 737
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 244 bits (622), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 256/507 (50%), Gaps = 53/507 (10%)
Query: 33 RLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPL 92
+L DYQ G+ +L I+ DEMGLGKT+Q +S LG L ++ ++ P +++ P+
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSK-MYKPSIIICPV 442
Query: 93 STLSNWAKEFRKWLPDMNIIVY------------VGTRASREVCQQYEFYNDKKPGK--P 138
+ L W +E +KW PD ++ + G + + + +D +P
Sbjct: 443 TLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNT 502
Query: 139 IKFNALL------------TTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLS 186
K+++LL TTYE + L I W Y ++DE HR++N + +
Sbjct: 503 KKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCK 562
Query: 187 EFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDF---------VQNYKNLSSFN 237
+ T +++++TG P+QN + ELW+L F+ P K F V Y N S
Sbjct: 563 QLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQ 622
Query: 238 EKELANLHMELR----PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFH 293
+ LR P++LRR+ DV L K E +L ++ Q+ Y+ L +
Sbjct: 623 VSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASS-- 680
Query: 294 NLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLV 353
+ + GN+ SL I V ++K CNHP L E +H + N ER SGK+
Sbjct: 681 EVEQIFDGNRNSLYGIDV-MRKICNHPDLLER-EHSHQNPDYGNP----ER----SGKMK 730
Query: 354 ILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFN 413
++ ++L + HRVL+FSQ ++LDIL ++ + ++R+DG T + R +D FN
Sbjct: 731 VVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFN 790
Query: 414 APGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYR 473
D F F+L+T+ GGLG NL A+ VIIFD DWNP ND+QA RA RIGQ++ V +YR
Sbjct: 791 N-SEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYR 849
Query: 474 FVTSKSVEEDILERAKKKMVLDHLVIQ 500
+T ++EE + R K L + +++
Sbjct: 850 LITRGTIEEKVYHRQIYKHFLTNKILK 876
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 254/514 (49%), Gaps = 59/514 (11%)
Query: 34 LRDYQLEGLNFLVNSWR------NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHG-PF 86
LR +Q EG+ F+ + N ILAD+MGLGKT+QS+++L L Q G P
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLL-CQGFDGTPM 238
Query: 87 ----LVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFN 142
++V P S +SNW E +KW+ D ++ + +V + + +
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSA----LQ 294
Query: 143 ALLTTYEVV-LKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 201
L+ +YE + + L+ DEAHRLKN + L+ + K ++L++GTP+
Sbjct: 295 VLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPM 354
Query: 202 QNSVEELWALLHFLDPDKFKSKDDFVQNY----------------KNLSSFNEKELANLH 245
QN +EE +A+++F +P F Y KNL++ EL++
Sbjct: 355 QNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSS-- 412
Query: 246 MELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGN--Q 303
++ ILRR + LPPKI ++ +M+ LQ Y + NL + + N Q
Sbjct: 413 -KVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSK--NLKRALADNAKQ 469
Query: 304 VSLLNIVVELKKCCNHP-FLFESADHGYGGASG-SNDNSKLERIVFS------------- 348
+L + LKK CNHP ++++ G G G N +FS
Sbjct: 470 TKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAW 529
Query: 349 ---SGKLVILDKLLVRLH-ETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAEL 404
SGK+ +L +LL L +T R+++ S + LD+ + R + F RLDGST
Sbjct: 530 VELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISK 589
Query: 405 RQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 464
RQ+ ++ N P D+F FLLS++AGG G+NL A+ +++FD DWNP ND QA +R R G
Sbjct: 590 RQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDG 649
Query: 465 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLV 498
Q++ V +YRF+++ ++EE + +R K L ++
Sbjct: 650 QKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 254/514 (49%), Gaps = 61/514 (11%)
Query: 34 LRDYQLEGLNFLVNSWR------NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHG-PF 86
LR +Q EG+ F+ + N ILAD+MGLGKT+QS+++L L Q G P
Sbjct: 180 LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLL-CQGFDGTPM 238
Query: 87 ----LVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFN 142
++V P S +SNW E +KW+ D ++ + +V + + +
Sbjct: 239 VKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSA----LQ 294
Query: 143 ALLTTYEVV-LKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 201
L+ +YE + + L+ DEAHRLKN + L+ + K ++L++GTP+
Sbjct: 295 VLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPM 354
Query: 202 QNSVEELWALLHFLDPDKFKSKDDFVQNY----------------KNLSSFNEKELANLH 245
QN +EE +A+++F +P F Y KNL++ EL++
Sbjct: 355 QNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSS-- 412
Query: 246 MELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGN--Q 303
++ ILRR + LPPKI ++ +M+ LQ Y + + L + + N Q
Sbjct: 413 -KVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQTTYNGCLCMQ----LKRALADNAKQ 467
Query: 304 VSLLNIVVELKKCCNHP-FLFESADHGYGGASG-SNDNSKLERIVFS------------- 348
+L + LKK CNHP ++++ G G G N +FS
Sbjct: 468 TKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAW 527
Query: 349 ---SGKLVILDKLLVRLH-ETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAEL 404
SGK+ +L +LL L +T R+++ S + LD+ + R + F RLDGST
Sbjct: 528 VELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISK 587
Query: 405 RQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 464
RQ+ ++ N P D+F FLLS++AGG G+NL A+ +++FD DWNP ND QA +R R G
Sbjct: 588 RQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDG 647
Query: 465 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLV 498
Q++ V +YRF+++ ++EE + +R K L ++
Sbjct: 648 QKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 681
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 229 bits (585), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 215/363 (59%), Gaps = 25/363 (6%)
Query: 24 QQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIH 83
Q PE KG L++YQ++GL +LVN + N ILADEMGLGKT+Q+++ L L + I
Sbjct: 577 QTPELFKGT-LKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 635
Query: 84 GPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKP-GKPIKFN 142
GPFLVV P S L+NWA E ++ PD+ + Y G R + ++ N K+ + F+
Sbjct: 636 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKN--INPKRMYRRDAGFH 693
Query: 143 ALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 202
L+T+Y++++ D+ +++W Y+++DEA +K+S + + TL F+ +N+LL+TGTP+Q
Sbjct: 694 ILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQ 753
Query: 203 NSVEELWALLHFLDPDKFKSKDDF-------VQNY-KNLSSFNEKELANLHMELRPHILR 254
N++ ELWALLHF+ P F + D F ++N+ ++ + NE +L LH L+P +LR
Sbjct: 754 NNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLR 813
Query: 255 RVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILER----NFHNLNKGVRGNQ--VSLLN 308
RV KDV L K E + ++S Q+ +Y+ I + + N+G ++ ++L+N
Sbjct: 814 RVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMN 873
Query: 309 IVVELKKCCNHPFLFESADHGYGGASGSNDNS-------KLERIVFSSGKLVILDKLLVR 361
IV++L+K CNHP LFE + G NS +LE + +S G+ I+ K+
Sbjct: 874 IVIQLRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKL 933
Query: 362 LHE 364
LH+
Sbjct: 934 LHQ 936
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Query: 344 RIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAE 403
+++ SGKL LD LL RL HRVL+F+QM ++L+IL +YM+ R +++ RLDGS+
Sbjct: 1200 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1259
Query: 404 LRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI 463
R+ + F SD F FLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+
Sbjct: 1260 DRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1318
Query: 464 GQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
GQ + V +YR + ++VEE IL RA +K + LV+
Sbjct: 1319 GQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVM 1354
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 226 bits (577), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 272/529 (51%), Gaps = 75/529 (14%)
Query: 33 RLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHG-------- 84
+LR YQ EG+N+L R + IL D+MGLGKT+Q+ +++ +A + G
Sbjct: 1450 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVA--SDAAERRGSTDELDVF 1507
Query: 85 PFLVVVPLSTLSNWAKEFRKW--LPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFN 142
P ++V P + + +WA E K+ L ++++ YVG+ R V + +F N N
Sbjct: 1508 PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDR-VSLREQFNN---------HN 1557
Query: 143 ALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 202
++T+Y+VV KD L++ WNY ++DE H +KN+++++ + + +++L+++GTP+Q
Sbjct: 1558 VIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQ 1617
Query: 203 NSVEELWALLHFLDPDKFKSKDDFVQNYKN--LSSFNEK-----------ELANLHMELR 249
N++ ELW+L FL P ++ F +Y L++ + K + LH ++
Sbjct: 1618 NNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVM 1677
Query: 250 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWI--------------LERNFHNL 295
P +LRR ++V LP KI + ++SP+Q + Y+ ++ + +
Sbjct: 1678 PFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSG 1737
Query: 296 NKGVRGNQVS--LLNIVVELKKCCNHPFLF-------ESADHGYGGASGSNDNSKLERIV 346
N V + S + + L K C+HP L A +G +D V
Sbjct: 1738 NADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKV 1797
Query: 347 FSSGKLVILDKLLVR-------------LHETKHRVLIFSQMVRLLDILGEYM---SLRG 390
S KLV L ++L L +HRVLIF+Q LLDI+ + + ++
Sbjct: 1798 QHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKS 1857
Query: 391 FQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 450
+ RLDGS E R + + FN+ + D LL+T GGLG+NL +ADT++ + DWNP
Sbjct: 1858 VTYMRLDGSVVPEKRFEIVKAFNSDPTIDV-LLLTTHVGGLGLNLTSADTLVFMEHDWNP 1916
Query: 451 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
D QAM RAHR+GQ+ VVN++R + ++EE ++ K K+ + + VI
Sbjct: 1917 MRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1965
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 226 bits (576), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 272/529 (51%), Gaps = 75/529 (14%)
Query: 33 RLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHG-------- 84
+LR YQ EG+N+L R + IL D+MGLGKT+Q+ +++ +A + G
Sbjct: 1481 QLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVA--SDAAERRGSTDELDVF 1538
Query: 85 PFLVVVPLSTLSNWAKEFRKW--LPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFN 142
P ++V P + + +WA E K+ L ++++ YVG+ R V + +F N N
Sbjct: 1539 PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDR-VSLREQFNN---------HN 1588
Query: 143 ALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 202
++T+Y+VV KD L++ WNY ++DE H +KN+++++ + + +++L+++GTP+Q
Sbjct: 1589 VIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQ 1648
Query: 203 NSVEELWALLHFLDPDKFKSKDDFVQNYKN--LSSFNEK-----------ELANLHMELR 249
N++ ELW+L FL P ++ F +Y L++ + K + LH ++
Sbjct: 1649 NNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVM 1708
Query: 250 PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWI--------------LERNFHNL 295
P +LRR ++V LP KI + ++SP+Q + Y+ ++ + +
Sbjct: 1709 PFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSG 1768
Query: 296 NKGVRGNQVS--LLNIVVELKKCCNHPFLF-------ESADHGYGGASGSNDNSKLERIV 346
N V + S + + L K C+HP L A +G +D V
Sbjct: 1769 NADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKV 1828
Query: 347 FSSGKLVILDKLLVR-------------LHETKHRVLIFSQMVRLLDILGEYM---SLRG 390
S KLV L ++L L +HRVLIF+Q LLDI+ + + ++
Sbjct: 1829 QHSPKLVALQEILEECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKS 1888
Query: 391 FQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 450
+ RLDGS E R + + FN+ + D LL+T GGLG+NL +ADT++ + DWNP
Sbjct: 1889 VTYMRLDGSVVPEKRFEIVKAFNSDPTIDV-LLLTTHVGGLGLNLTSADTLVFMEHDWNP 1947
Query: 451 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
D QAM RAHR+GQ+ VVN++R + ++EE ++ K K+ + + VI
Sbjct: 1948 MRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1996
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 218/398 (54%), Gaps = 62/398 (15%)
Query: 24 QQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIH 83
Q PE KG L++YQ++GL +LVN + N ILADEMGLGKT+Q+++ L L + I
Sbjct: 577 QTPELFKGT-LKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIW 635
Query: 84 GPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTR------------------------- 118
GPFLVV P S L+NWA E ++ PD+ + Y G
Sbjct: 636 GPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISF 695
Query: 119 ---ASREVC--------QQYEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRWNYLM 167
A R++C +++ +D G F+ L+T+Y++++ D+ +++W Y++
Sbjct: 696 DPWAVRQICICKRACNVVRFQTLSDMDAG----FHILITSYQLLVTDEKYFRRVKWQYMV 751
Query: 168 VDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDF- 226
+DEA +K+S + + TL F+ +N+LL+TGTP+QN++ ELWALLHF+ P F + D F
Sbjct: 752 LDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFN 811
Query: 227 ------VQNY-KNLSSFNEKELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPL 279
++N+ ++ + NE +L LH L+P +LRRV KDV L K E + ++S
Sbjct: 812 EWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSR 871
Query: 280 QKQYYKWILER----NFHNLNKGVRGNQ--VSLLNIVVELKKCCNHPFLFESADHGYGGA 333
Q+ +Y+ I + + N+G ++ ++L+NIV++L+K CNHP LFE +
Sbjct: 872 QQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLY 931
Query: 334 SGSNDNS-------KLERIVFSSGKLVILDKLLVRLHE 364
G NS +LE + +S G+ I+ K+ LH+
Sbjct: 932 FGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKLLHQ 969
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 1/156 (0%)
Query: 344 RIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAE 403
+++ SGKL LD LL RL HRVL+F+QM ++L+IL +YM+ R +++ RLDGS+
Sbjct: 1233 KLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIM 1292
Query: 404 LRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI 463
R+ + F SD F FLLSTRAGGLGINL ADTVI ++SDWNP DLQAM RAHR+
Sbjct: 1293 DRRDMVRDFQH-RSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRL 1351
Query: 464 GQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
GQ + V +YR + ++VEE IL RA +K + LV+
Sbjct: 1352 GQTKDVTVYRLICKETVEEKILHRASQKNTVQQLVM 1387
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 176/299 (58%), Gaps = 16/299 (5%)
Query: 34 LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLS 93
LR+YQ GL++LV + N ILADEMGLGKT+ ++++L L + I GP L+VVP S
Sbjct: 536 LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTS 595
Query: 94 TLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVVLK 153
+ NW EF KW P I+ Y G+ R++ +Q K F+ +TTY +V++
Sbjct: 596 VMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWM-------KLNSFHVCITTYRLVIQ 648
Query: 154 DKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 213
D + + +W YL++DEAH +KN ++Q + TL F++K ++L+TGTPLQN + ELW+L+H
Sbjct: 649 DSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 708
Query: 214 FLDPDKFKSKDDFVQNYKN--------LSSFNEKELANLHMELRPHILRRVIKDVEKSLP 265
FL P F+S +F + N N++ + LH LRP +LRR+ +DVEK LP
Sbjct: 709 FLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLP 768
Query: 266 PKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFE 324
K E ++ +S Q+ Y+ + G+ +++I+++L+K CNHP LFE
Sbjct: 769 SKHEHVIFCRLSKRQRNLYEDFIAST-ETQATLTSGSFFGMISIIMQLRKVCNHPDLFE 826
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Query: 345 IVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAEL 404
I F GKL L LL +L HR LIF+QM ++LD+L +++L G+ + RLDGST E
Sbjct: 1070 IQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEE 1129
Query: 405 RQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 464
RQ M FN F F+LSTR+GG+GINL ADTVI +DSDWNP D QA R HRIG
Sbjct: 1130 RQTLMQRFNT-NPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1188
Query: 465 QQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQ 500
Q V+IYR ++ ++EE+IL++A +K VLD+LVIQ
Sbjct: 1189 QTREVHIYRLISESTIEENILKKANQKRVLDNLVIQ 1224
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 214 bits (544), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 248/504 (49%), Gaps = 68/504 (13%)
Query: 34 LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLS 93
L +Q EGLN+L + IL D+MGLGKT+Q S L L +++ I LVV P +
Sbjct: 377 LYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKT 435
Query: 94 TLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVVLK 153
L +W KE Y GT ++Y+ ++ + GK I LLTTY++V
Sbjct: 436 LLPHWMKELATVGLSQMTREYYGTSTK---AREYDLHHILQ-GKGI----LLTTYDIVRN 487
Query: 154 DKAVLSKI------------RWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 201
+ L +W+Y+++DE H +KN Q +L E + ++++I+GTP+
Sbjct: 488 NTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPI 547
Query: 202 QNSVEELWALLHFLDPDKFKSKDDFVQNY---------KNLSSFNEKELANLHMELRPHI 252
QN+++ELWAL +F P K+ F QNY KN + ++ + + LR HI
Sbjct: 548 QNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHI 607
Query: 253 ----LRRVIKDV------EKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGN 302
LRR+ +V L K E ++ + ++ Q+Q Y+ L N + G+
Sbjct: 608 QPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFL--NSEIVLSAFDGS 665
Query: 303 QVSLLNIVVELKKCCNHPFLF-----ESADHGYGGASGSNDNSKLERIVFS--------- 348
++ L I LKK C+HP L E G + ER+
Sbjct: 666 PLAALTI---LKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDD 722
Query: 349 --------SGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGST 400
S KL + LL L HRVLIFSQ ++L+++ + ++ G+ F R+DG+T
Sbjct: 723 FQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTT 782
Query: 401 KAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 460
KA R + ++ F G FLL+++ GGLG+ L AD VI+ D WNP D Q++ RA
Sbjct: 783 KAPDRLKTVEEFQE-GHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRA 841
Query: 461 HRIGQQEVVNIYRFVTSKSVEEDI 484
+RIGQ + V +YR +TS +VEE I
Sbjct: 842 YRIGQTKDVIVYRLMTSATVEEKI 865
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 177 bits (449), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 153/563 (27%), Positives = 260/563 (46%), Gaps = 118/563 (20%)
Query: 32 GRLRDYQLEGLNFL----------VNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+L+ +Q+ G+ F+ V S ILA MGLGKT Q ++ FL A +
Sbjct: 717 AKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQ---VIAFLYTAMR 773
Query: 82 IHG----PFLVVVPLSTLSNWAKEFRKWLPD--MNIIVYVGTRASREVCQQYEFYNDKKP 135
L+V P++ L NW EF KW+P + +++ SR Y+F+ ++
Sbjct: 774 CVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSR-----YKFFYERNF 828
Query: 136 GKPIKFNALLTTYEVVLKDKAVLSKIR--WNYLMVDEAHRLKNSEAQLYTTLSEFSTKNK 193
NA + + + +R + L+ DEAH +KN++A L + + +
Sbjct: 829 WGVKDLNAA----------RGICNALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRR 878
Query: 194 LLITGTPLQNSVEELWALLHFLDPDKFKSKDDF-------VQNYKNLSSFNEK-ELAN-- 243
+ +TG+PLQN++ E + ++ F+ S +F ++N ++++S E ++ N
Sbjct: 879 IALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQR 938
Query: 244 ---LHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKG-- 298
L+ +L+ + R + V+K LPPK ++ V++SPLQ+ Y+ LE + + G
Sbjct: 939 SHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLE--LYGFSDGRT 996
Query: 299 ---VRGNQVSLLNIVVELKKCCNHPFLFE-SADHGYGGASGS-----NDNSKLERIVFS- 348
+R N + ++ ++ NHP + + ++ G GS +D S E I ++
Sbjct: 997 DERMRKNFFAAYQVLAQI---LNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNM 1053
Query: 349 ---------------------------------------SGKLVILDKLLVRLHETKHRV 369
SGK+++L +L + +
Sbjct: 1054 VTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKA 1113
Query: 370 LIFSQMVRLLDILGEYMSL------------RGFQFQRLDGSTKAELRQQAMDHFNAPGS 417
L+FSQ + LD++ Y+S +G + R+DG T++ RQ+ +D FN P +
Sbjct: 1114 LVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDN 1173
Query: 418 DDF-CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVT 476
C L+STRAG LGINL A+ VII D WNP DLQA+ RA R GQ++ V YR +
Sbjct: 1174 KRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMA 1233
Query: 477 SKSVEEDILERAKKKMVLDHLVI 499
++EE I +R K L V+
Sbjct: 1234 RGTIEEKIYKRQVTKEGLAARVV 1256
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/579 (26%), Positives = 262/579 (45%), Gaps = 129/579 (22%)
Query: 32 GRLRDYQLEGLNFL----------VNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+L+ +Q+ G+ F+ V S ILA MGLGKT Q ++ FL A +
Sbjct: 717 AKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQ---VIAFLYTAMR 773
Query: 82 IHG----PFLVVVPLSTLSNWAKEFRKWLPD--MNIIVYVGTRASRE------------- 122
L+V P++ L NW EF KW+P + +++ SRE
Sbjct: 774 CVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKG 833
Query: 123 --VCQQYEFYNDKKPGKPIK-FNALLTTYEVVLKDKAVLSKIR--WNYLMVDEAHRLKNS 177
Y + + G+ +K NA + + + +R + L+ DEAH +KN+
Sbjct: 834 GVFLMGYTNFRNLSLGRGVKDLNAA----------RGICNALRDGPDILVCDEAHIIKNT 883
Query: 178 EAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDF-------VQNY 230
+A L + + ++ +TG+PLQN++ E + ++ F+ S +F ++N
Sbjct: 884 KADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENG 943
Query: 231 KNLSSFNEK-ELAN-----LHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYY 284
++++S E ++ N L+ +L+ + R + V+K LPPK ++ V++SPLQ+ Y
Sbjct: 944 QHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 1003
Query: 285 KWILERNFHNLNKG-----VRGNQVSLLNIVVELKKCCNHPFLFE-SADHGYGGASGS-- 336
+ LE + + G +R N + ++ ++ NHP + + ++ G GS
Sbjct: 1004 QRFLE--LYGFSDGRTDERMRKNFFAAYQVLAQI---LNHPGIPQLRSEDSKNGRRGSIV 1058
Query: 337 ---NDNSKLERIVFS----------------------------------------SGKLV 353
+D S E I ++ SGK++
Sbjct: 1059 DIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMI 1118
Query: 354 ILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSL------------RGFQFQRLDGSTK 401
+L +L + + L+FSQ + LD++ Y+S +G + R+DG T+
Sbjct: 1119 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1178
Query: 402 AELRQQAMDHFNAPGSDDF-CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 460
+ RQ+ +D FN P + C L+STRAG LGINL A+ VII D WNP DLQA+ RA
Sbjct: 1179 SSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRA 1238
Query: 461 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
R GQ++ V YR + ++EE I +R K L V+
Sbjct: 1239 WRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/579 (26%), Positives = 262/579 (45%), Gaps = 129/579 (22%)
Query: 32 GRLRDYQLEGLNFL----------VNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+L+ +Q+ G+ F+ V S ILA MGLGKT Q ++ FL A +
Sbjct: 717 AKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQ---VIAFLYTAMR 773
Query: 82 IHG----PFLVVVPLSTLSNWAKEFRKWLPD--MNIIVYVGTRASRE------------- 122
L+V P++ L NW EF KW+P + +++ SRE
Sbjct: 774 CVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKG 833
Query: 123 --VCQQYEFYNDKKPGKPIK-FNALLTTYEVVLKDKAVLSKIR--WNYLMVDEAHRLKNS 177
Y + + G+ +K NA + + + +R + L+ DEAH +KN+
Sbjct: 834 GVFLMGYTNFRNLSLGRGVKDLNAA----------RGICNALRDGPDILVCDEAHIIKNT 883
Query: 178 EAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDF-------VQNY 230
+A L + + ++ +TG+PLQN++ E + ++ F+ S +F ++N
Sbjct: 884 KADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENG 943
Query: 231 KNLSSFNEK-ELAN-----LHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYY 284
++++S E ++ N L+ +L+ + R + V+K LPPK ++ V++SPLQ+ Y
Sbjct: 944 QHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 1003
Query: 285 KWILERNFHNLNKG-----VRGNQVSLLNIVVELKKCCNHPFLFE-SADHGYGGASGS-- 336
+ LE + + G +R N + ++ ++ NHP + + ++ G GS
Sbjct: 1004 QRFLE--LYGFSDGRTDERMRKNFFAAYQVLAQI---LNHPGIPQLRSEDSKNGRRGSIV 1058
Query: 337 ---NDNSKLERIVFS----------------------------------------SGKLV 353
+D S E I ++ SGK++
Sbjct: 1059 DIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMI 1118
Query: 354 ILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSL------------RGFQFQRLDGSTK 401
+L +L + + L+FSQ + LD++ Y+S +G + R+DG T+
Sbjct: 1119 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1178
Query: 402 AELRQQAMDHFNAPGSDDF-CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 460
+ RQ+ +D FN P + C L+STRAG LGINL A+ VII D WNP DLQA+ RA
Sbjct: 1179 SSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRA 1238
Query: 461 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
R GQ++ V YR + ++EE I +R K L V+
Sbjct: 1239 WRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 155/579 (26%), Positives = 262/579 (45%), Gaps = 129/579 (22%)
Query: 32 GRLRDYQLEGLNFL----------VNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQ 81
+L+ +Q+ G+ F+ V S ILA MGLGKT Q ++ FL A +
Sbjct: 717 AKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQ---VIAFLYTAMR 773
Query: 82 IHG----PFLVVVPLSTLSNWAKEFRKWLPD--MNIIVYVGTRASRE------------- 122
L+V P++ L NW EF KW+P + +++ SRE
Sbjct: 774 CVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTKWRKKG 833
Query: 123 --VCQQYEFYNDKKPGKPIK-FNALLTTYEVVLKDKAVLSKIR--WNYLMVDEAHRLKNS 177
Y + + G+ +K NA + + + +R + L+ DEAH +KN+
Sbjct: 834 GVFLMGYTNFRNLSLGRGVKDLNAA----------RGICNALRDGPDILVCDEAHIIKNT 883
Query: 178 EAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDF-------VQNY 230
+A L + + ++ +TG+PLQN++ E + ++ F+ S +F ++N
Sbjct: 884 KADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENG 943
Query: 231 KNLSSFNEK-ELAN-----LHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYY 284
++++S E ++ N L+ +L+ + R + V+K LPPK ++ V++SPLQ+ Y
Sbjct: 944 QHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILY 1003
Query: 285 KWILERNFHNLNKG-----VRGNQVSLLNIVVELKKCCNHPFLFE-SADHGYGGASGS-- 336
+ LE + + G +R N + ++ ++ NHP + + ++ G GS
Sbjct: 1004 QRFLE--LYGFSDGRTDERMRKNFFAAYQVLAQI---LNHPGIPQLRSEDSKNGRRGSIV 1058
Query: 337 ---NDNSKLERIVFS----------------------------------------SGKLV 353
+D S E I ++ SGK++
Sbjct: 1059 DIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMI 1118
Query: 354 ILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSL------------RGFQFQRLDGSTK 401
+L +L + + L+FSQ + LD++ Y+S +G + R+DG T+
Sbjct: 1119 LLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTE 1178
Query: 402 AELRQQAMDHFNAPGSDDF-CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 460
+ RQ+ +D FN P + C L+STRAG LGINL A+ VII D WNP DLQA+ RA
Sbjct: 1179 SSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRA 1238
Query: 461 HRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
R GQ++ V YR + ++EE I +R K L V+
Sbjct: 1239 WRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 225/525 (42%), Gaps = 121/525 (23%)
Query: 56 ILADEMGLGKTVQSVSMLGFLQ-----NAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMN 110
ILADEMG+GKT+Q++S++ + +++ G LV+VP LS W E +
Sbjct: 157 ILADEMGMGKTIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISR------ 210
Query: 111 IIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVV----LKDKAV------LSK 160
+ + S V Q + DK K + ++ +LTT +V KD+ V L
Sbjct: 211 ----LTSPGSTRVLQYHGPKRDKNVQKLMNYDFVLTTSPIVENEYRKDEGVDETMSPLHS 266
Query: 161 IRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKF 220
I+WN ++VDEAH +KN ++ + + ++GTPLQN V+EL++L+ + + F
Sbjct: 267 IKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNFF 326
Query: 221 KSKDDFVQNYKNLSSFNEKELANLHMELRPHILRRVI---KDVEKSLPPKIERILRV--- 274
Y +SF + H+ ++ + + + S+P +IE + V
Sbjct: 327 ---------YSTYASF---AFRHTHITFARNVTVKFLIGGNILPLSIPVRIENVPAVLIM 374
Query: 275 ------------EMSPLQKQYYKWILERNFHNLNKGVRG-----NQVSLLNIVVELKKCC 317
+S ++ +Y+ + + + + ++ N + +++ L++
Sbjct: 375 QINTSLGGKRRDALSVVEADFYESLYKVSKTTFDGYIQAGTLMNNYAHIFGLLIRLRQAV 434
Query: 318 NHPFLFESADHGYGGASGSNDN--------------------------------SKLERI 345
+HP+L Y SG+N N +KL+
Sbjct: 435 DHPYLV-----SYSSPSGANANLLDANKNEKECGFGHDPSKDYFVTSSEHQASKTKLKGF 489
Query: 346 VFSSGKLVILDKLLVRLHETKHRV-------------------LIFSQMVRLLDILGEYM 386
SS IL+++ + +T ++ ++FSQ LD++ +
Sbjct: 490 RASS----ILNRINLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYAL 545
Query: 387 SLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDS 446
G +L GS + A+ +F D L+S +AGG+ +NL A V + D
Sbjct: 546 GKSGVSCVQLVGSMSKAAKDAALKNFKEE-PDCRVLLMSLQAGGVALNLTAASHVFMMDP 604
Query: 447 DWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKK 491
WNP + QA R HRIGQ + V + RF+ K+VEE IL KKK
Sbjct: 605 WWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKK 649
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 238/509 (46%), Gaps = 71/509 (13%)
Query: 11 QRKKSKAS----LRKL-EQQPEWLKGGRLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 65
QR + AS LR L E+ P ++ +L +Q EG+ F++ ++ V+LADEMGLGK
Sbjct: 145 QRAIASASRVPDLRHLYEKIPSHIEP-KLLPFQREGIEFIL---QHGGRVLLADEMGLGK 200
Query: 66 TVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWL--PDMNIIVYVGTRASREV 123
T+Q++++ +Q + P L++ P S +WA +WL P +I+V +
Sbjct: 201 TLQAIAVTTCVQES----WPVLIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPGGSNK 256
Query: 124 CQQYEFYNDKKPGKPIKFNAL--LTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQL 181
C + + G I + + + +Y+VV K +L + + ++ DE+H LKN +A+
Sbjct: 257 C-GFTIVSSNTKGT-IHLDGVFNIVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKR 314
Query: 182 YTTLSEFSTKNK--LLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEK 239
+ K + +L++GTP + EL+ L L PD +++ ++ Y F
Sbjct: 315 TSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTY 374
Query: 240 ELANLHMELR-----PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHN 294
+ A+ H EL ++RR+ KDV LP K + + ++++ + + FH
Sbjct: 375 QGASNHDELHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINAL----FHE 430
Query: 295 LNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERI-------VF 347
L K V+ ++K C + +D L+ I ++
Sbjct: 431 L-KVVKS----------KIKDCIS-----------------EDDIKSLKFIEKNLINKIY 462
Query: 348 SSGKLVILDKLLVRLH---ETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAEL 404
+ + + +L L E + L+F+ +L+ L +++ + R+DGST A
Sbjct: 463 TDSAVAKIPAVLDYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASS 522
Query: 405 RQQAMDHFNAPGSDDF-CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRI 463
RQ + F D+ +LS RA G+GI L A TVI + W P + +QA RAHRI
Sbjct: 523 RQALVSDFQ--DKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRI 580
Query: 464 GQQEVVNIYRFVTSKSVEEDILERAKKKM 492
GQ VNI+ + + +V++ I + + K+
Sbjct: 581 GQVSSVNIHYLLANDTVDDIIWDVVQSKL 609
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Query: 331 GGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRG 390
GG S S L V GK+ L+KL+ ++L+FS VR+LDIL +++ +G
Sbjct: 510 GGISASKSFMDLSD-VKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKG 568
Query: 391 FQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 450
+ F RLDGST LRQ +D FNA S FL+ST+AGGLG+NL +A+ V+IFD +WNP
Sbjct: 569 YSFARLDGSTPTNLRQSLVDDFNASPSKQV-FLISTKAGGLGLNLVSANRVVIFDPNWNP 627
Query: 451 QNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVI 499
+DLQA R+ R GQ+ V ++R +++ S+EE + R K L ++ +
Sbjct: 628 SHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAV 676
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 141/281 (50%), Gaps = 34/281 (12%)
Query: 33 RLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNA----------QQI 82
RL ++Q EG+ F+ N ++N+ IL D+MGLGKT+Q+++ L + +
Sbjct: 138 RLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESD 197
Query: 83 HGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFN 142
GP L++ P S + NW EF +W + VY G+ + +K + ++
Sbjct: 198 KGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGS--------NRDMILEKLKARGVE-- 247
Query: 143 ALLTTYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQ 202
L+T+++ VLS I W ++ DEAHRLKN +++LY E TK ++ +TGT +Q
Sbjct: 248 VLVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQ 307
Query: 203 NSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELA-------------NLHMELR 249
N + EL+ L ++ P +++ F Y ++ A +L LR
Sbjct: 308 NKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLR 367
Query: 250 PHILRRVIKD-VEKSLPPKIERILRVEMSPLQKQYYKWILE 289
++LRR ++ + + K + ++ +MS LQ++ Y+ +++
Sbjct: 368 KYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQ 408
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 131/519 (25%), Positives = 225/519 (43%), Gaps = 72/519 (13%)
Query: 31 GGRLRDYQLEGLNFLVNSWRNDT--NVILADEMGLGKTVQSVS-MLGFLQNAQQIHGPFL 87
++ +Q+EG FL ++ D I+A G GKT +S M FL Q L
Sbjct: 347 AAEMKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKP--L 404
Query: 88 VVVPLSTLSNWAKEFRKW-LPDMNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLT 146
VV+P L W KEF +W + D+ ++ + +A QQ K I F
Sbjct: 405 VVLPKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRA-QQLSILKQWMEKKSILFLGYQQ 463
Query: 147 TYEVVLKDKA-------VLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 199
+V D +L K+ + L++DE H +N + L +L++ T K++++GT
Sbjct: 464 FSTIVCDDTTDSLSCQEILLKVP-SILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGT 522
Query: 200 PLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSF-----------NEKELANLHMEL 248
QN V+E++ +L+ + P KF D K + ++ + ++A++ E
Sbjct: 523 LYQNHVKEVFNILNLVRP-KFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNET 581
Query: 249 RPHILRR---------VIKDVEK---------------SLPPKIERILRVEMSPLQKQYY 284
H L++ VI+D+ + LP + + + +SP Q
Sbjct: 582 VEHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTVVLNLSPKQLNEV 641
Query: 285 KWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLER 344
K L + R +VS + + L HP L +D S + + +E+
Sbjct: 642 K--------KLRREKRKFKVSAVGSAIYL-----HPKLKVFSDKS-DDVSDTTMDEMVEK 687
Query: 345 IVFSSG-KLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSL-RGFQFQR----LDG 398
+ + G K L+ ++L+FSQ + L L +L +G++ + L G
Sbjct: 688 LDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTG 747
Query: 399 STKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMS 458
+T +E R+ +M+ FN+ D F S +A G GI+L A ++I D NP QA+
Sbjct: 748 NTSSEQREWSMETFNS-SPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIG 806
Query: 459 RAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHL 497
RA R GQ+++V+ YR + S EE+ KK V+ +
Sbjct: 807 RAFRPGQKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKM 845
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 235/526 (44%), Gaps = 81/526 (15%)
Query: 34 LRDYQLEGLNFLVNSWRNDT--NVILADEMGLGKTVQSVSMLGFLQN--AQQIHGPFLVV 89
+R +Q EG FL N+ D ILA G GKT +S FLQ+ A LVV
Sbjct: 265 MRPHQTEGFRFLCNNLAADEPGGCILAHAPGSGKTFLLIS---FLQSFMAMDPQARPLVV 321
Query: 90 VPLSTLSNWAKEFRKW-LPDMNIIVYVGTRA-SREVCQQYEFYNDKKPGKPI------KF 141
+P + +W +EF W + + ++ + +A SR+ QQ + + I +F
Sbjct: 322 LPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRK--QQLKVLGQWIKERSILFLGYQQF 379
Query: 142 NALLT--TYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGT 199
++ +E +D ++ + L++DE H +N E + ++L+ T+ K+++TGT
Sbjct: 380 TRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGT 439
Query: 200 PLQNSVEELWALLHFLDPDKFK------------SKDDFVQNYK-NLSS-------FNEK 239
QN+VEE++ +L + P K SK + + + N SS F
Sbjct: 440 LFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAV 499
Query: 240 EL-----------ANLHMELRP---HILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYK 285
EL A+L +LR +IL D LP E + + +S +Q+ K
Sbjct: 500 ELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSIQRDEVK 559
Query: 286 WILERNFHNLNKGVRGNQVSL---LNIVVELKKCCNHPFLFESADHGYGGASGSND---- 338
L K Q+SL L I +LK FL E+ +G G S +N
Sbjct: 560 --------GLRKMELFKQISLGAALYIHPKLKS-----FLEENPSNGEKGFSDNNTTVMK 606
Query: 339 -NSKLERIVFSSG-KLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMS-LRGFQFQR 395
+ L++I G K+ LL T ++L+FSQ + + L MS ++G++ +
Sbjct: 607 LDKMLKKINVRDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGK 666
Query: 396 ----LDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQ 451
+ G + E R+ +M+ FN + F S +A G GI+L A V+I D NP
Sbjct: 667 EMFTITGDSSNEQREWSMERFNN-SLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPS 725
Query: 452 NDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHL 497
QA++RA+R GQ+ V Y+ V + S EE+ E +K ++ +
Sbjct: 726 VTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSKM 771
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 222/515 (43%), Gaps = 95/515 (18%)
Query: 34 LRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLS 93
L +QL+GL F R +ADEMGLGKT+Q++++ G + G LVV P
Sbjct: 204 LLPFQLDGLRF---GLRRGGRCFIADEMGLGKTLQAIAIAGCFIS----EGSILVVCPAV 256
Query: 94 TLSNWAKEFRKWLPDM---NIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEV 150
WA+E +WLP ++ + G + D P ++ +Y++
Sbjct: 257 LRFTWAEELERWLPSCLPSDVHLVFG-------------HQDNPAYLPRWPKVVVISYKM 303
Query: 151 VLKDKAVLSKIRWNYLMVDEAHRL----KNSEAQLYTTLSEFSTKNK--LLITGTPLQNS 204
+ + + + W L+VDE+H L K S+ T+ + + K K +L++GTP +
Sbjct: 304 LQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSR 363
Query: 205 VEELWALLHFLDPDKF-KSKDDFVQNY-----------KNLSSFNE-KELANLHMELRPH 251
+++ ++ L P K K +F + Y K F++ L L++ L
Sbjct: 364 PFDIFHQINMLWPGLLGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLNQT 423
Query: 252 IL-RRVIKDVEKSLPPKIERILRVEM------------SPLQKQYYKWILE--RNFHNLN 296
++ RR+ + + LPPK +I+ + + S +KQ I E H +
Sbjct: 424 VMIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIAEVTEKSHEPD 483
Query: 297 KGVRG-NQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSS---GKL 352
+ RG N+ +N E++D G + +N ++ + KL
Sbjct: 484 QNARGSNEAGHVNA--------------ENSD----GPNSDKENQLCGKLSYQQLGIAKL 525
Query: 353 ------VILDKLLVRLHETKH---------RVLIFSQMVRLLDILGEYMSLRGFQFQRLD 397
+ L LL L T ++++F+ ++LD + E++ +G F R+D
Sbjct: 526 SAFREWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRID 585
Query: 398 GSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAM 457
G+T RQ A+ F S+ ++ AGG+G++ + A V+ + P LQA
Sbjct: 586 GTTLPRDRQLAVQSFQF-SSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAE 644
Query: 458 SRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKM 492
RAHR GQ VN+Y F +++E + KK+
Sbjct: 645 DRAHRRGQTSAVNVYIFCAKDTMDESNWQNLNKKL 679
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 106 bits (265), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 163/368 (44%), Gaps = 93/368 (25%)
Query: 56 ILADEMGLGKTVQSVSML----------GFL----------------------------- 76
ILAD MGLGKTV ++S+L GFL
Sbjct: 416 ILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLG 475
Query: 77 -------QNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEF 129
Q + +G L+V P++ L W E ++ VYV
Sbjct: 476 FDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYV-------------H 522
Query: 130 YNDKKPGKPIKF----NALLTTYEVVLK--------DKAVLSKIRWNYLMVDEAHRLKNS 177
Y +P K K + ++TTY V+ D + +RW +++DEAH +KNS
Sbjct: 523 YGQSRP-KDAKLLSQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNS 581
Query: 178 EAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKS---KDDFVQNYKNLS 234
++Q+ + + +TGTP+QN++E+L++LL FL + + + + VQ K
Sbjct: 582 KSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQ--KPFE 639
Query: 235 SFNEKELANLHMELRPHILRRVIKDVEKS------LPPKIERILRVEMSPLQKQYYKWIL 288
+E+ L + L+P +LRR ++ LPP R++ E+S ++ +Y +
Sbjct: 640 EGDERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALF 699
Query: 289 ERNFHNLNKGVRGNQV-----SLLNIVVELKKCCNHPFLFESADHGYGGASGSNDNSKLE 343
+R+ ++ V +V S+L +++ L++CC+HPFL S G + +D +KL
Sbjct: 700 KRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMS----RGDTAEYSDLNKLS 755
Query: 344 RIVFSSGK 351
+ F SGK
Sbjct: 756 K-RFLSGK 762
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 349 SGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQA 408
S K+ L + L L + + ++FSQ LD+L +S F F RLDG+ + R++
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 409 MDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEV 468
+ F+ GS L+S +AGG+GINL A + D WNP + QA+ R HRIGQ +
Sbjct: 922 LKEFSEDGSI-LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKE 980
Query: 469 VNIYRFVTSKSVEE--DILERAKKKMVLDHLVIQ 500
V I RF+ +VEE + ++ K++M+ L Q
Sbjct: 981 VKIRRFIVKGTVEERMEAVQARKQRMISGALTDQ 1014
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 77/327 (23%)
Query: 56 ILADEMGLGKTVQSVSML--------------------GFLQNAQQIH---------GPF 86
ILAD MGLGKTV +++++ +N ++IH G
Sbjct: 684 ILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKGGT 743
Query: 87 LVVVPLSTLSNWAKEFRKWL-PD-MNIIVYVGTRASREVCQQYEFYNDKKPGKPI-KFNA 143
L++ P++ LS W E PD ++++VY G + + K I +
Sbjct: 744 LIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHD-------------AKAIASHDV 790
Query: 144 LLTTYEVVL----KDKA--VLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLIT 197
+LTTY V+ +D A + +I W +++DEAH +K+ + Q E S+ + +T
Sbjct: 791 VLTTYGVLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLT 850
Query: 198 GTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELAN--------LHMELR 249
GTPLQN +E+L++LL FL + + N+ S +K N + LR
Sbjct: 851 GTPLQNKLEDLYSLLCFLHVEPW-------CNWAWWSKLIQKPYENGDPRGLKLIKAILR 903
Query: 250 PHILRRV--IKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQ 303
P +LRR +D E S LPP +++ E S ++ +Y + +R+ ++ V +
Sbjct: 904 PLMLRRTKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGK 963
Query: 304 V-----SLLNIVVELKKCCNHPFLFES 325
V ++L +++ L++CCNHPFL S
Sbjct: 964 VLHNYANILELLLRLRQCCNHPFLVMS 990
Score = 90.5 bits (223), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 367 HRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLST 426
+ ++FSQ LD+L + RGF+F R DG + R++ + FN L+S
Sbjct: 1128 EKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTI-LLMSL 1186
Query: 427 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI-- 484
+AGG+G+NL A +V + D WNP + QA+ R HRIGQ+ V + RF+ +VEE +
Sbjct: 1187 KAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246
Query: 485 LERAKKKMVLDHLV 498
++ K++M+ L
Sbjct: 1247 VQARKQRMIAGALT 1260
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 202/474 (42%), Gaps = 69/474 (14%)
Query: 55 VILADEMGLGKTVQSVSML-GFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIV 113
I++ + G GKT +V L +L+ H +V+ P + + W E RKW ++NI
Sbjct: 612 CIISHKAGTGKTRLTVVFLQSYLKRFPNSHP--MVIAPATLMRTWEDEVRKW--NVNIPF 667
Query: 114 YVGTRASREVCQQYEFYNDKKPGKPIKFNALLTTYEVV-----LKDKAVLS-------KI 161
Y Q Y D + ++ N + +V K K++L K+
Sbjct: 668 YNMNSL------QLSGYEDAEAVSRLEGNRHHNSIRMVKLVSWWKQKSILGISYPLYEKL 721
Query: 162 RWN------------------YLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQN 203
N L++DE H +N + ++ L+E T+ ++ ++GT QN
Sbjct: 722 AANKNTEGMQVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQN 781
Query: 204 SVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFN-EKELANLHMELRPHILRRVIKD--- 259
+ +EL +L P KD LS + E E ++ E R L+ +I
Sbjct: 782 NFKELSNVLCLARP---ADKDTISSRIHELSKCSQEGEHGRVNEENRIVDLKAMIAHFVH 838
Query: 260 ------VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVEL 313
+++SLP + + V P Q+ K IL+R + N +++S +++ L
Sbjct: 839 VHEGTILQESLP-GLRDCVVVLNPPFQQ---KKILDRIDTSQNTFEFEHKLSAVSVHPSL 894
Query: 314 KKCCNHPFLFESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHET-KHRVLIF 372
CCN + D G A+ K R+ + G +R+ T K +VL++
Sbjct: 895 YLCCNPT---KKEDLVIGPATLGT--LKRLRLKYEEGVKTKFLIDFIRISGTVKEKVLVY 949
Query: 373 SQMVRLLDILGEYMS-----LRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
SQ + L ++ E + G Q + G + RQ +D+FN P S L ST+
Sbjct: 950 SQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTK 1009
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 481
A GI+L A V+I D WNP + QA+SRA RIGQ+ V IY + + E
Sbjct: 1010 ACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSE 1063
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 157/352 (44%), Gaps = 52/352 (14%)
Query: 162 RWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFK 221
R L++DEAH +N + ++ TLS+ T+ ++L++GTP QN+ EL +L P +
Sbjct: 1004 RPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLE 1063
Query: 222 SKDDFVQNY---------KNLSS-FNEKELANLHMELRPHILRRVIKDVEKSLPPKIERI 271
++ KNL + N + + L + P + ++ SLP E +
Sbjct: 1064 RLTSTLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFVHVHKGSILQSSLPGLRECV 1123
Query: 272 LRVEMSPLQKQYYKWI-LERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGY 330
+ + LQ++ + I + N N +++SL+++ HP L
Sbjct: 1124 VVLNPPELQRRVLESIEVTHNRKTKNVFETEHKLSLVSV---------HPSLVSRCKI-- 1172
Query: 331 GGASGSNDNSKLERIVFSSGKLVILDKL---------------LVRLHET-KHRVLIFSQ 374
S+ ER+ L L K+ V L E K +VL+FSQ
Sbjct: 1173 ---------SEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIKEKVLVFSQ 1223
Query: 375 MVRLLDILGEYMSLR-----GFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAG 429
+ L ++ +++ R G + + G + + RQ ++ FN P S FL ST+A
Sbjct: 1224 YIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKAC 1283
Query: 430 GLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 481
GI+L A VI+ D WNP + QA+SRA+RIGQ+ +V Y V + E
Sbjct: 1284 SEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPE 1335
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 146/330 (44%), Gaps = 79/330 (23%)
Query: 56 ILADEMGLGKTVQSVSML-----------------GFLQNAQQIHGPF------------ 86
ILAD+ GLGKTV +++++ G + F
Sbjct: 567 ILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCK 626
Query: 87 ---------LVVVPLSTLSNWAKEFRKWL---PDMNIIVYVGTRASREVCQQYEFYNDKK 134
L+V P S + WA E RK + ++++VY G + K
Sbjct: 627 MRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRT------------KD 674
Query: 135 PGKPIKFNALLTTYEVVLKDKAV-----------LSKIRWNYLMVDEAHRLKNSEAQLYT 183
P + K++ ++TTY +V K K + L+++ W +++DEA +KN + Q
Sbjct: 675 PHELAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKNYKTQASI 734
Query: 184 TLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKN-LSSFNEKELA 242
S K + ++GTP+QNS+ +L++ FL D + S F + KN +SS+ +
Sbjct: 735 ACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISSYPGEGYK 794
Query: 243 NLHMELRPHILRRVIKDV------EKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLN 296
L L+ +LRR KD SLPPK + RV+ + ++ +Y LE + +
Sbjct: 795 TLQAILKKVMLRRT-KDTLLDGKPVISLPPKSIELRRVDFTKEERDFYSK-LECDSRDQF 852
Query: 297 K------GVRGNQVSLLNIVVELKKCCNHP 320
K V+ N V++L +++ L++ C HP
Sbjct: 853 KEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
+ ++F+Q ++LD+L + G Q++R DG R A+ FN D ++S +
Sbjct: 1073 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT-LPDVSVMIMSLK 1131
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI--L 485
A LG+N+ A VI+ D WNP + QA+ RAHRIGQ V + RF +VE+ I L
Sbjct: 1132 AASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILAL 1191
Query: 486 ERAKKKMV 493
++ K+KMV
Sbjct: 1192 QQKKRKMV 1199
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 370 LIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPG-SDDFCFLLSTRA 428
++FSQ ++L +L + GF RLDG+ + R Q + F P + L S +A
Sbjct: 710 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 769
Query: 429 GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERA 488
G GINL A V +FD WNP + QAM R HRIGQ++ V + R + S+EE +LE
Sbjct: 770 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 829
Query: 489 KKK 491
+KK
Sbjct: 830 QKK 832
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 122/247 (49%), Gaps = 30/247 (12%)
Query: 87 LVVVPLSTLSNWAKEFRK-WLPD-MNIIVYVGTRASREVCQQYEFYNDKKPGKPIKFNAL 144
L+V P S +S W + + +P + + +Y G + +V + +K++ +
Sbjct: 342 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDV------------NELMKYDIV 389
Query: 145 LTTYEVVLKDKA----VLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTP 200
LTTY + +++ + K+ W +++DEAH +KN+ AQ + + + +TGTP
Sbjct: 390 LTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTP 449
Query: 201 LQNSVEELWALLHFLDPDKFKSKD---DFVQNYKNLSSFNEKELANLHMELRPHILRRVI 257
+QN +L++L+ FL + F K +Q + L N+K L+ L + + LRR
Sbjct: 450 IQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQ--RPLGQGNKKGLSRLQVLMATISLRRTK 507
Query: 258 KDVEKSLPPKIERILRVEMSPLQKQYYKWI------LERNFHNLNKGVRGNQVSLLNIVV 311
+ LPPK VE+SP ++Q Y + + +N N N + N ++L+I++
Sbjct: 508 EKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLIN-NGSLMRNYSTVLSIIL 566
Query: 312 ELKKCCN 318
L++ C+
Sbjct: 567 RLRQLCD 573
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
+ ++F+Q ++LD+L + G Q++R DG R A+ FN D ++S +
Sbjct: 1116 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTL-PDVSVMIMSLK 1174
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI--L 485
A LG+N+ A VI+ D WNP + QA+ RAHRIGQ V + RF +VE+ I L
Sbjct: 1175 AASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILAL 1234
Query: 486 ERAKKKMV 493
++ K+KMV
Sbjct: 1235 QQKKRKMV 1242
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 147/362 (40%), Gaps = 99/362 (27%)
Query: 56 ILADEMGLGKTVQSVSML-----------------GFLQNAQQIHGPF------------ 86
ILAD+ GLGKTV +++++ G + F
Sbjct: 566 ILADDQGLGKTVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCK 625
Query: 87 ---------LVVVPLSTLSNWAKEFRKWL---PDMNIIVYVGTRASRE---------VCQ 125
L+V P S + WA E RK + ++++VY G +++ V
Sbjct: 626 MRGRPAAGTLIVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHELAKYDVVIT 685
Query: 126 QYEFYNDKKPGKP------------------IKFNA----LLTTYEVVLKDK-------- 155
Y + + P +P + F + L + + K +
Sbjct: 686 TYSLVSVEVPKQPRDRADEEKGGIHDGGVESVGFGSNKKDLPNSQKKGTKKRKHMDCEPV 745
Query: 156 ----AVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWAL 211
L+++ W +++DEA +KN + Q S K + ++GTP+QNS+ +L++
Sbjct: 746 EFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSY 805
Query: 212 LHFLDPDKFKSKDDFVQNYKN-LSSFNEKELANLHMELRPHILRRVIKDV------EKSL 264
FL D + S F + KN +SS+ + L L+ +LRR KD SL
Sbjct: 806 FRFLKYDPYSSYQTFCETIKNPISSYPGEGYKTLQAILKKVMLRRT-KDTLLDGKPVISL 864
Query: 265 PPKIERILRVEMSPLQKQYYKWILERNFHNLNK------GVRGNQVSLLNIVVELKKCCN 318
PPK + RV+ + ++ +Y LE + + K V+ N V++L +++ L++ C
Sbjct: 865 PPKSIELRRVDFTKEERDFYSK-LECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACG 923
Query: 319 HP 320
HP
Sbjct: 924 HP 925
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 111/511 (21%), Positives = 209/511 (40%), Gaps = 81/511 (15%)
Query: 51 NDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMN 110
N +++ G GKT ++ L P LV+ P +TL W KEF KW +
Sbjct: 709 NIGGCVISHSPGAGKTFLIIAFLTSYLKLFPGKRP-LVLAPKTTLYTWYKEFIKWEIPVP 767
Query: 111 IIVYVGTRASREVCQQ--YEFYNDKKPGKPI-----------KFNAL-------LTTYEV 150
+ + G R Q +F KP + + K++A T++
Sbjct: 768 VHLIHGRRTYCTFKQNKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTT 827
Query: 151 VLKDKAVLSKIRW---------NYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPL 201
++++ + + ++ L++DE H ++++++L L + T ++L++GT
Sbjct: 828 LMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLRILLSGTLF 887
Query: 202 QNSVEELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKELANLHMELRPHIL----RRVI 257
QN+ E + L P F+ ++ L ++K N + PH+L R++
Sbjct: 888 QNNFCEYFNTLCLARPK-------FI--HEVLMELDQKFKTNHGVNKAPHLLENRARKLF 938
Query: 258 KDV-EKSLPPKI--ERILRVEMSPLQK---------------------QYYKWILERN-- 291
D+ K + + ER+ + M Q Y ++
Sbjct: 939 LDIIAKKIDASVGDERLQGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDI 998
Query: 292 ----FHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHG--YGGASGSNDNSKLERI 345
L ++ L + +++ HP+L S++ + ++ KL+
Sbjct: 999 QHKILTKLQDVIKTYFGYPLEVELQITLAAIHPWLVTSSNCCTKFFNPQELSEIGKLKHD 1058
Query: 346 VFSSGKLVILDKLLVRLHETKHRVLIFSQMVRLLDILGEYMS-----LRGFQFQRLDGST 400
K++ + L+ R+ + + ++LIF + + + E RG + L G
Sbjct: 1059 AKKGSKVMFVLNLIFRVVK-REKILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDL 1117
Query: 401 KAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRA 460
+ R + +D F PG+ L S A GI+L A VI+ DS+WNP QA++RA
Sbjct: 1118 ELFERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARA 1177
Query: 461 HRIGQQEVVNIYRFVTSKSVEEDILERAKKK 491
R GQQ+VV +Y+ ++ ++EED R K
Sbjct: 1178 FRPGQQKVVYVYQLLSRGTLEEDKYRRTTWK 1208
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 360 VRLHETKH-----RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNA 414
+RLH + + +IFSQ +LD++ + G +F+RLDG+ R +A+ F+
Sbjct: 881 MRLHSSSPSQGAVKTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSK 940
Query: 415 PGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRF 474
D L+S +AG LG+N+ A VI+ D WNP + QA+ RAHRIGQ V + R
Sbjct: 941 -KPDVKVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRI 999
Query: 475 VTSKSVEEDILERAKKKMVL 494
+VE+ IL+ ++K +
Sbjct: 1000 TIKDTVEDRILKLQEEKRTM 1019
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 13/183 (7%)
Query: 154 DKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLH 213
D L K+ W +++DEA +KN Q+ + K + ++GTP+QN++++L++
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 592
Query: 214 FLDPDKFKSKDDFVQNYKNLSSFNEKE-LANLHMELRPHILRRVIKDVEK-----SLPPK 267
FL D + F K S N + L LR +LRR + +LPPK
Sbjct: 593 FLRYDPYAVYKSFYSTIKVPISRNSCQGYKKLQAVLRAIMLRRTKGTLLDGKPIINLPPK 652
Query: 268 IERILRVEMSPLQKQYYKWILERNFHNLNKG------VRGNQVSLLNIVVELKKCCNHPF 321
+ + +V+ S ++ +YK LE + + K + N ++L +++ L++ C+HP
Sbjct: 653 VVNLSQVDFSVAERSFYKK-LEADSRSQFKAYADAGTLSQNYANILLLLLRLRQACDHPQ 711
Query: 322 LFE 324
L +
Sbjct: 712 LVK 714
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
+ ++FSQ ++L++L + Q++RLDG+ R +A+ FN + ++S +
Sbjct: 967 KAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEVTVMIMSLK 1025
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 487
A LG+N+ A V++ D WNP + QA+ RAHRIGQ V + RF +VE+ IL
Sbjct: 1026 AASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILAL 1085
Query: 488 AKKKMVL 494
+KK ++
Sbjct: 1086 QQKKRMM 1092
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 54/290 (18%)
Query: 87 LVVVPLSTLSNWAKEFRKWL---PDMNIIVYVGTR--------------------ASREV 123
LVV P S + WA E K + +++++VY G+ S EV
Sbjct: 510 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEV 569
Query: 124 CQQ--------------------YEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRW 163
+Q F ++KK P + + V L+K+ W
Sbjct: 570 PKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSW 629
Query: 164 NYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSK 223
+++DEA +KN + Q+ K + ++GTP+QNS+++L++ FL D + S
Sbjct: 630 FRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSY 689
Query: 224 DDFVQNYKNLSSFNE-KELANLHMELRPHILRRVIKDVEK-----SLPPKIERILRVEMS 277
F KN + N K L L+ +LRR + SLPPK + +V+ +
Sbjct: 690 VLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFT 749
Query: 278 PLQKQYYKWILERNFHNLNK-----GVRGNQVSLLNIVVELKKCCNHPFL 322
++ +Y + + + V+ N V++L +++ L++ C+HP L
Sbjct: 750 VEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLL 799
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
+ ++FSQ ++L++L + Q++RLDG+ R +A+ FN + ++S +
Sbjct: 1125 KAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL-PEVTVMIMSLK 1183
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 487
A LG+N+ A V++ D WNP + QA+ RAHRIGQ V + RF +VE+ IL
Sbjct: 1184 AASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILAL 1243
Query: 488 AKKKMVL 494
+KK ++
Sbjct: 1244 QQKKRMM 1250
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 54/290 (18%)
Query: 87 LVVVPLSTLSNWAKEFRKWL---PDMNIIVYVGTR--------------------ASREV 123
LVV P S + WA E K + +++++VY G+ S EV
Sbjct: 668 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEV 727
Query: 124 CQQ--------------------YEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRW 163
+Q F ++KK P + + V L+K+ W
Sbjct: 728 PKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSW 787
Query: 164 NYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSK 223
+++DEA +KN + Q+ K + ++GTP+QNS+++L++ FL D + S
Sbjct: 788 FRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSY 847
Query: 224 DDFVQNYKNLSSFNE-KELANLHMELRPHILRRVIKDVEK-----SLPPKIERILRVEMS 277
F KN + N K L L+ +LRR + SLPPK + +V+ +
Sbjct: 848 VLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFT 907
Query: 278 PLQKQYYKWILERNFHNLNK-----GVRGNQVSLLNIVVELKKCCNHPFL 322
++ +Y + + + V+ N V++L +++ L++ C+HP L
Sbjct: 908 VEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLL 957
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 58/347 (16%)
Query: 56 ILADEMGLGKTVQSVSMLGFLQNAQ----------QIHGPFLVVVPLSTLSNWAKEFRKW 105
ILAD+ GLGKT+ ++S++ LQ + Q G L+V P S + WA+E ++
Sbjct: 78 ILADDQGLGKTISTISLI-LLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWAREVKEK 136
Query: 106 LPD---MNIIVYVGTRASRE---------VCQQYEFYNDKKPGKPI--KFNAL-----LT 146
+ D ++++V+ G+ +++ V Y ++ P P+ +++++ L
Sbjct: 137 VSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDSMRGRESLD 196
Query: 147 TYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVE 206
++ L ++RW +++DEAH +KN + K + +TGTP++N V+
Sbjct: 197 GSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVD 256
Query: 207 ELWALLHFLDPDKFKSKDDFVQNYKNLSSFNEKEL---ANLHMELRPHILRRVIKDVEKS 263
+L++ FL + + F Q K + ++K L L LR +LRR E S
Sbjct: 257 DLYSYFRFLRYHPYAMCNSFHQRIK--APIDKKPLHGYKKLQAILRGIMLRRT---KEWS 311
Query: 264 LPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLF 323
K+E R W E + + + + LL +++ L++ CNHP L
Sbjct: 312 FYRKLELNSR------------WKFEE--YAADGTLHEHMAYLLVMLLRLRQACNHPQLV 357
Query: 324 ESADHGYGGASGSNDNSKLERIVFSSGKLVILDKLLVRLHETKHRVL 370
+GY + + S R+ ++ LD L++L T V
Sbjct: 358 ----NGYSHSDTTRKMSDGVRVAPRENLIMFLD--LLKLSSTTCSVC 398
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%)
Query: 422 FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVE 481
L+S +AG LG+N+ A VI+ D WNP + QA+ RAHRIGQ V + R +VE
Sbjct: 510 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVE 569
Query: 482 EDILERAKKK 491
E IL ++K
Sbjct: 570 ERILTLHERK 579
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
+ ++FSQ LD++ + G +L GS R A++ F D FL+S +
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKE-DPDCRVFLMSLK 740
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILER 487
AGG+ +NL A V + D WNP + QA R HRIGQ + + + RF+ +VEE IL
Sbjct: 741 AGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRL 800
Query: 488 AKKK 491
KKK
Sbjct: 801 QKKK 804
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 54/233 (23%)
Query: 153 KDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALL 212
K+K++L ++WN +++DEAH +K + + + ++GTPLQN V EL++L+
Sbjct: 344 KEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRWALSGTPLQNRVGELYSLI 403
Query: 213 HFLDPDKF-----KSKDDFVQNY-------------------------KNLSSFNEKELA 242
FL + K D + +Y K ++ + L
Sbjct: 404 RFLQIRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAVRHFCWWNKYVAKPITVYGSFGLG 463
Query: 243 NLHMELRPHILRRVIKDV-----------EKSLPPKIERILRVEMSPLQKQYYKWILERN 291
M L H +V+KD+ + +LPP+I + R + + YY+ + + +
Sbjct: 464 KRAMILLKH---KVLKDILLRRTKLGRAADLALPPRIITLRRDTLDVKEFDYYESLYKNS 520
Query: 292 FHNLNKGVRG-----NQVSLLNIVVELKKCCNHPFLFESADHGYGGASGSNDN 339
N + N + +++ L++ +HP+L Y +SG+N N
Sbjct: 521 QAEFNTYIEAGTLMNNYAHIFDLLTRLRQAVDHPYLVV-----YSNSSGANAN 568
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHF-NAPGSDDFCFLLST 426
+ +IFSQ +LD++ + +F+RLDG+ R +A+ F N P D ++S
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDP--DVKVMIMSL 885
Query: 427 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI-- 484
+AG LG+N+ A VI+ D WNP + QA+ RAHRIGQ V + R +VE+ I
Sbjct: 886 KAGNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILA 945
Query: 485 LERAKKKMV 493
L+ K+KMV
Sbjct: 946 LQEEKRKMV 954
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 62/299 (20%)
Query: 87 LVVVPLSTLSNWAKEFRKWLPD---MNIIVYVGTRASRE---------VCQQYEFYNDKK 134
L+V P S + WA+E + + D +++++Y G +++ V Y +++
Sbjct: 346 LIVCPASVVRQWARELDEKVTDEAKLSVLIYHGGNRTKDPIELAKYDVVMTTYAIVSNEV 405
Query: 135 PGKPI-------------------------KFNALLTTYEVVLK------------DKAV 157
P +P+ + N + TT + K D
Sbjct: 406 PKQPLVDDDENDEKNSEKYGLASGFSINKKRKNVVGTTKKSKKKKGNNNAGDSSDPDSGT 465
Query: 158 LSKIRWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDP 217
L+K+ W +++DEA +KN Q+ K + ++GTP+QN++++L++ FL
Sbjct: 466 LAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 525
Query: 218 DKFKSKDDFVQNYKNLSSFNE-KELANLHMELRPHILRR---VIKDVEK--SLPPKIERI 271
D + F K S N + L LR +LRR + D + +LPPK +
Sbjct: 526 DPYAVYKSFCHQIKGPISRNSLQGYKKLQAVLRAIMLRRTKGTLLDGQPIINLPPKTINL 585
Query: 272 LRVEMSPLQKQYYKWILERNFHNLNKGVRG------NQVSLLNIVVELKKCCNHPFLFE 324
+V+ S ++ +Y LE + + K N ++L +++ L++ C+HP L +
Sbjct: 586 SQVDFSVEERSFY-VKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQACDHPQLVK 643
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 366 KHRVLIFSQMVRLLDILGEYMS-----LRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDF 420
+ ++LIF + + + E RG + L G + R + +D F PG
Sbjct: 1072 REKILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSR 1131
Query: 421 CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV 480
L S A GI+L A VI+ DS+WNP QA++RA R GQQ+VV +Y+ ++ ++
Sbjct: 1132 VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTL 1191
Query: 481 EEDILERAKKK 491
EED R K
Sbjct: 1192 EEDKYRRTTWK 1202
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 54/290 (18%)
Query: 87 LVVVPLSTLSNWAKEFRKWL---PDMNIIVYVGTR--------------------ASREV 123
LVV P S + WA E K + +++++VY G+ S EV
Sbjct: 675 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELAKYDVVVTTFSIVSMEV 734
Query: 124 CQQ--------------------YEFYNDKKPGKPIKFNALLTTYEVVLKDKAVLSKIRW 163
+Q F ++KK P + + V L+K+ W
Sbjct: 735 PKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPLAKVSW 794
Query: 164 NYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSK 223
+++DEA +KN + Q+ K + ++GTP+QNS+++L++ FL D + S
Sbjct: 795 FRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYDPYSSY 854
Query: 224 DDFVQNYKNLSSFNE-KELANLHMELRPHILRRVIKDVEK-----SLPPKIERILRVEMS 277
F KN + N K L L+ +LRR + SLPPK + +V+ +
Sbjct: 855 VLFCSTIKNPITRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLPPKSIELRKVDFT 914
Query: 278 PLQKQYYKWILERNFHNLNK-----GVRGNQVSLLNIVVELKKCCNHPFL 322
++ +Y + + + V+ N V++L +++ L++ C+HP L
Sbjct: 915 VEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHPLL 964
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 358 LLVRLHETKHRVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGS 417
L ++ + + +VL+FS +LD+L + R+ G K+ Q A+ F
Sbjct: 1441 LWIKSSDPQTKVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKS---QTAISKFKGSEK 1497
Query: 418 DDF-------------CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIG 464
+ LL + G G+NL A VI+ + NP + QA+ R HRIG
Sbjct: 1498 ETQKTNSHQKEEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIG 1557
Query: 465 QQEVVNIYRFVTSKSVEEDI 484
Q++ ++RF+ S +VEE I
Sbjct: 1558 QEKPTLVHRFLVSGTVEESI 1577
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 114/291 (39%), Gaps = 63/291 (21%)
Query: 84 GPFLVVVPLSTLSNWAKEFRKW--LPDMNIIVYVGTR----ASREVCQQYEFYNDKKPGK 137
G L+V P L W E + L + +Y G R + + E N
Sbjct: 500 GATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLN------ 553
Query: 138 PIKFNALLTTYEVVLKD------------------------KAVLSKIRWNYLMVDEAHR 173
+ +LTTY+V+ +D L++I W + +DEA
Sbjct: 554 ---ADIVLTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQM 610
Query: 174 LKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFVQNYKNL 233
++++ A TK++ ITGTP+Q +++L+ LL FL + F +++ ++
Sbjct: 611 VESNAAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFDVSRWWIEVIRDP 670
Query: 234 SSFNEKELANLHMELRPHILRRVIK---DVEKSLPPKIERILRVEMSPLQKQYY------ 284
+ + + ++ R K E LPP+ E + ++ S +++ +Y
Sbjct: 671 YERRDTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQHDT 730
Query: 285 -------------KWILERNFHNLNKGV--RGNQVSLLNIVVELKKCCNHP 320
+ IL+R + + + LLN +++L++ C HP
Sbjct: 731 CVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHP 781
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 313 LKKCCNHPFLFESADHGYGGASGSNDNSKLERI----VFSSGKLVILDKLLVRLHETKHR 368
++K C+HP++ +++ N +L I + +SGKL +LDK+L + + +
Sbjct: 523 VRKTCDHPYVMDASLKQL-----LTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLK 577
Query: 369 VLIFSQMVR------LLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCF 422
++F Q + L +IL +++ R F + + + + A+++FN S
Sbjct: 578 AVVFYQATQTPEGLLLGNILEDFVGQR-FGPKSYEHGIYSSKKNSAINNFNK-ESQCCVL 635
Query: 423 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEE 482
LL TRA I L AD I+F S NP +D++ + + E I+R + +VEE
Sbjct: 636 LLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEE 695
Query: 483 D--ILERAKKK 491
IL R K+
Sbjct: 696 KALILARQNKR 706
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 19/191 (9%)
Query: 313 LKKCCNHPFLFESADHGYGGASGSNDNSKLERI----VFSSGKLVILDKLLVRLHETKHR 368
++K C+HP++ +++ N +L I + +SGKL +LDK+L + + +
Sbjct: 523 VRKTCDHPYVMDASLKQL-----LTKNLELHEILDVEIKASGKLHLLDKMLTHIKKNGLK 577
Query: 369 VLIFSQMVR------LLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCF 422
++F Q + L +IL +++ R F + + + + A+++FN S
Sbjct: 578 AVVFYQATQTPEGLLLGNILEDFVGQR-FGPKSYEHGIYSSKKNSAINNFNK-ESQCCVL 635
Query: 423 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEE 482
LL TRA I L AD I+F S NP +D++ + + E I+R + +VEE
Sbjct: 636 LLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIESCSERTKIFRLYSVCTVEE 695
Query: 483 D--ILERAKKK 491
IL R K+
Sbjct: 696 KALILARQNKR 706
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 368 RVLIFSQMVRLLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTR 427
+VLIFSQ + + ++ + ++ G +F ++ ++ + +A+ F D LL
Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQ--NDADCMALLMDG 1252
Query: 428 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDI--- 484
+G LG++L+ V + + W+ + Q +SRAHR+G + + + ++EE +
Sbjct: 1253 SGALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQMMRF 1312
Query: 485 LERAKK 490
LE A+K
Sbjct: 1313 LEDAEK 1318