Miyakogusa Predicted Gene

Lj2g3v2926420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MLR1_SOYBN 906 77.2 84.6 (tr|K7MLR1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G17616.1 531 48.1 64.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:9819608-9821632 FORWARD LENGTH=674
Medicago Medtr4g099200.1 905 74.3 83.3 | PPR containing plant protein | HC | chr4:41103641-41099252 | 20130731
Soybean Glyma17g15910.1 884 77.5 84.7  
LJGI gnl|LJGI|TC72890 636 99.4 99.4 similar to UniRef100_A7R575 Cluster: Chromosome undetermined scaffold_896, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_896, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2926420.1 length: 607 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 1.7e-07 453-499
HMMPfam PF13812 PPR_3 0.03 529-557
HMMTigr TIGR00756 PPR: 0.00022 463-487
ProfileScan PS51375 PPR 7.278 53-87
137-171
210-240
375-409
340-374
452-486
487-517
526-560
no_ID  
HMMPanther PTHR24015 FAMILY 6.7e-20 63-567
Seg seg seg NA 322-331
Wolf-PSORT
Lj2g3v2926420.1	chlo 6, cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2926420.1