Miyakogusa Predicted Gene
- Lj2g3v2926420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2926420.1 Non Characterized Hit- tr|D8QYW4|D8QYW4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,20.74,3e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
seg,NUL,NODE_54477_length_2322_cov_9.973299.path2.1
(607 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g099200.1 | PPR containing plant protein | HC | chr4:41103... 905 0.0
Medtr4g081540.1 | PPR containing plant protein | HC | chr4:31641... 239 6e-63
Medtr8g062650.1 | hypothetical protein | LC | chr8:26177591-2617... 134 2e-31
Medtr5g044930.1 | PPR containing plant-like protein | HC | chr5:... 127 3e-29
Medtr5g045620.1 | PPR containing plant-like protein | HC | chr5:... 127 4e-29
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 94 4e-19
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 56 1e-07
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 56 1e-07
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 55 2e-07
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 54 6e-07
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 52 2e-06
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 52 2e-06
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 52 2e-06
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 2e-06
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 2e-06
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 51 3e-06
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 51 3e-06
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 51 3e-06
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 51 3e-06
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 51 4e-06
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 51 4e-06
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 51 4e-06
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 51 4e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 50 5e-06
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 6e-06
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 50 7e-06
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 50 7e-06
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 50 7e-06
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 9e-06
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 50 9e-06
>Medtr4g099200.1 | PPR containing plant protein | HC |
chr4:41103641-41099252 | 20130731
Length = 686
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/592 (74%), Positives = 493/592 (83%)
Query: 16 TLRNRLIVQSSYSNDHVWIRKACDLALQIVEEKSGLLQSDGLIKLALSLARLQMLSHVSV 75
L N+LIVQ YS++HV +RKACDL L+IV+E SGL+ D L KLALSLAR+QM S SV
Sbjct: 95 NLLNQLIVQLCYSSNHVLVRKACDLVLRIVDENSGLIHVDTLTKLALSLARMQMPSPASV 154
Query: 76 ILRLMLNKGCVPPMNLLSLVVFHVVKTEIGTQIASNYLSQVCDFYNCLNDKKSHLAVMVK 135
ILRLML KG VP MN LSL+VFH+VKTEIGT + SNYLSQVCDFYN L DKK+ A+M+K
Sbjct: 155 ILRLMLTKGFVPSMNFLSLIVFHIVKTEIGTHLVSNYLSQVCDFYNGLKDKKAQHAIMLK 214
Query: 136 PDTVVFNLVLDACVRFKLSLKGLCLIELMAMTGTVADAHSIVLISQILEMNGLRDEMMEL 195
PDT+VFNLVLDACVRFKL LKGLCLIELM + GTVADAHSIV+ISQILEMNGLRDE+MEL
Sbjct: 215 PDTLVFNLVLDACVRFKLCLKGLCLIELMPLMGTVADAHSIVIISQILEMNGLRDELMEL 274
Query: 196 KGHIDGVSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDMNRLRDCHISKECTKRLQK 255
K HIDGVSA+Y RHY QFYDSLL LHFKFNDIDAA+KLVLDMN +CH ++E LQK
Sbjct: 275 KCHIDGVSASYVRHYRQFYDSLLRLHFKFNDIDAASKLVLDMNSSHNCHNNEEYRNHLQK 334
Query: 256 PCFIGIGSSNLKNGLKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALSNRAMVMFICGY 315
P F+ IGS NLKN LKIHIEPELLQKD+VLK+EGR+ L+FYKGGKL LSNRA+ FI GY
Sbjct: 335 PSFVAIGSPNLKNALKIHIEPELLQKDTVLKLEGREGLVFYKGGKLTLSNRALAKFIIGY 394
Query: 316 KKDGQIXXXXXXXXXXQEGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMG 375
KKDG+I LY+ GS LCSDVI ACIQMGWLESAHDILDD EA GSPMG
Sbjct: 395 KKDGRISELSKLLLSIHGELYSATGSGLCSDVISACIQMGWLESAHDILDDAEAAGSPMG 454
Query: 376 RETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIICEETAYSVGKSDLA 435
+ Y+LLLSAYQ MQREA+ALLKQMKK+ +LS+DA D+H++C ET+ SVGKSDLA
Sbjct: 455 CDMYILLLSAYQKEEMQREAQALLKQMKKIDFLPELSNDAIDEHVLCRETSNSVGKSDLA 514
Query: 436 VALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 495
VALAQIL EDQT +PLVYNFNSSIFFFCKA MIEDAL+AYR+M +MKI+PT QTFA+++
Sbjct: 515 VALAQILNAEDQTDIPLVYNFNSSIFFFCKARMIEDALRAYRKMCEMKIRPTNQTFAHLV 574
Query: 496 CGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRN 555
CGYSSLGMYREIT WGDIKR MK LV NRDLYELLLLNF+RGGYFERVMEVI HM +
Sbjct: 575 CGYSSLGMYREITFFWGDIKRFMKNNYLVVNRDLYELLLLNFIRGGYFERVMEVIGHMND 634
Query: 556 HNMYTDKWMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWVGID 607
NMYTDK +YKSEFLRLHKNLYR LKASDARTEAQSKR EHVQEF+KW GID
Sbjct: 635 RNMYTDKLLYKSEFLRLHKNLYRSLKASDARTEAQSKRLEHVQEFRKWAGID 686
>Medtr4g081540.1 | PPR containing plant protein | HC |
chr4:31641729-31645378 | 20130731
Length = 786
Score = 239 bits (610), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 185/670 (27%), Positives = 320/670 (47%), Gaps = 84/670 (12%)
Query: 16 TLRNRLIVQSSYSNDHVWIRKACDLALQIVEE-KSGLLQSDGLIKLALSLARLQMLSHVS 74
+L N +I S D W++KA DL + E+ + LL+ + LI L+ LA++++ S
Sbjct: 121 SLFNVIITSYVESLDTQWLQKAYDLVQRAGEDGRKDLLEKELLIYLSYGLAKVRLPVLAS 180
Query: 75 VILRLMLNKGCVPPMNLLSLVVFHVVKTEIGTQIASNYLSQVCD-FYNCLNDKKSHLA-- 131
ILR M++ PP+ S V+ H+ +T G+ +A+ + ++ F N D + +
Sbjct: 181 TILRKMIDMEHFPPVTAWSAVLAHMSQTADGSFLAAELILEIGYLFQNNRVDPRKKINGP 240
Query: 132 -VMVKPDTVVFNLVLDACVRFKLSLKGLCLIELMAMTGTVADAHSIVLISQILEMNGLRD 190
+ +KP+T FN+ L C+ F+ S K L+++M G ADA+ ++ ++++ E NG R+
Sbjct: 241 LIAMKPNTNAFNIALAGCLVFEKSRKAEQLLDMMPRIGVKADANLLITMARVYERNGRRE 300
Query: 191 EMMELKGHIDGVSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDM--------NRLRD 242
E+M+L+ HI+ + QFY+ LL+ H KF D+D+A+ +VL+M N L
Sbjct: 301 ELMKLQRHIEEAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLRKAKEARNSLGS 360
Query: 243 CHISKECTKRLQKPCFIGIGSSNLKNG----------------------------LKIHI 274
TK + NL N LK+
Sbjct: 361 AKFLINTTKTDHSSSPRPASAHNLSNSKDLESVKIDQLIKNDVLSYEEFSKDRNFLKLEA 420
Query: 275 EPELLQKDSVLKVEGRQNLIFYKGGKLALSNRAMVMFICGYKKDGQIXXXXX--XXXXXQ 332
E + + K++ + +LI G L + V + + + G+ +
Sbjct: 421 ESKAVLSSLFAKLQTQVDLITTVHGILQPTETIYVKLVKAFLEAGKTKELAVFLLKAERE 480
Query: 333 EGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQ 392
+ ++ S+L VI +CI +GWL+ AHD+LD++ G G Y LL AY
Sbjct: 481 DSPFSNDNSALVH-VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCVANRA 539
Query: 393 REAKALLKQMKKVSLHHKLSDDAFD----KHIICEET----------------------- 425
+ +LL+ +K + +L ++++ ++ E+T
Sbjct: 540 ADVASLLRDARKAGI--QLDSNSYEAMIQSRVLQEDTQGALQLFKEMKEARIPKVSQQYS 597
Query: 426 ---AYSVGKSD-----LAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYR 477
A SV SD L L Q +K + Q V V+++N+ I FF K +++DA KA +
Sbjct: 598 GKLAKSVSDSDSDEAALMTKLVQEIK-DGQKVDCGVHDWNNVIHFFSKKRLMQDAEKALK 656
Query: 478 RMGKMKIQPTIQTFAYMLCGYSSLG-MYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 536
+M + P QTF M+ GY+++G Y E+T +WG++K L + + +++L + +L
Sbjct: 657 KMRSLGHTPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLASKSSIKFDQELLDSVLYT 716
Query: 537 FLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHKNLYRRLKASDARTEAQSKRFEH 596
F+RGG+F R EV+ M M+ DK+ Y+ FL+ HK LY+ KA +TE+Q + E
Sbjct: 717 FVRGGFFIRANEVVATMEKGKMFIDKYKYRMLFLKYHKTLYKG-KAPKFQTESQLNKREA 775
Query: 597 VQEFKKWVGI 606
FK+W+G+
Sbjct: 776 ALTFKRWIGM 785
>Medtr8g062650.1 | hypothetical protein | LC |
chr8:26177591-26178406 | 20130731
Length = 190
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 99/185 (53%), Gaps = 54/185 (29%)
Query: 357 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 416
+ SAHDILDD EA GSPMG Y+L SAYQ GMQREAKA LKQMKK++L +LSD+A
Sbjct: 60 INSAHDILDDAEAAGSPMGFNMYILHSSAYQKEGMQREAKARLKQMKKINLQKELSDNAI 119
Query: 417 DKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 476
DKH EET SVGKS+LA+ LAQ+LK E+QTV+
Sbjct: 120 DKHTPYEETLNSVGKSNLAITLAQVLKDENQTVI-------------------------- 153
Query: 477 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 536
T +L G G+ R K LV NRDLYELLLLN
Sbjct: 154 -------------TLTMLLWG----GIKR-----------FTKNNYLVVNRDLYELLLLN 185
Query: 537 FLRGG 541
F+RGG
Sbjct: 186 FIRGG 190
>Medtr5g044930.1 | PPR containing plant-like protein | HC |
chr5:19700063-19702654 | 20130731
Length = 664
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 43/296 (14%)
Query: 347 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 406
++ AC+ +G + AH+ILD++ A G +G Y+ +L AY EA L+ ++
Sbjct: 376 IVNACVSIGLSDKAHNILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSG 435
Query: 407 LHHKLSDDAFDKHIICE------ETAYSVGKS-------DLAVALAQILKG--------- 444
L KL + +D I ++ +S+ + DL + I+ G
Sbjct: 436 L--KLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPEL 493
Query: 445 ---------EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 495
ED + +++NS I FCKAG +EDA + +RRM ++ +P QT+ ++
Sbjct: 494 MAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLI 553
Query: 496 CGYSSLGMYREITIVWGDIKRLMKGADLVG---NRDLYELLLLNFLRGGYFERVMEVIDH 552
GY S Y ++ ++W ++KR + G G +++L + L ++GG+F+ VM+V++
Sbjct: 554 NGYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEK 613
Query: 553 MRNHNMYTDKWMYKSEFLRLHKNL-YRRLKASDARTEAQSKRFEHVQEFKKWVGID 607
+ ++ DKW YK F+ HK L RL+ + R + E + FK W G++
Sbjct: 614 SKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVR------KMEALIAFKNWAGLN 663
>Medtr5g045620.1 | PPR containing plant-like protein | HC |
chr5:20016549-20013908 | 20130731
Length = 660
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 144/296 (48%), Gaps = 43/296 (14%)
Query: 347 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 406
++ AC+ +G + AH ILD++ A G +G Y+ +L AY EA L+ ++
Sbjct: 372 IVNACVSIGLSDKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEASLLVTEISSSG 431
Query: 407 LHHKLSDDAFDKHIICE------ETAYSVGKS-------DLAVALAQILKG--------- 444
L KL + +D I ++ +S+ + DL + I+ G
Sbjct: 432 L--KLDVETYDALIETSMSGQDFQSVFSLFRDMRGARVLDLKGSYLTIMTGLMENHRPEL 489
Query: 445 ---------EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 495
ED + +++NS I FCKAG +EDA + +RRM ++ +P QT+ ++
Sbjct: 490 MAAFLDEVVEDPRIEVGTHDWNSIIHAFCKAGRLEDARRTFRRMTFLQFEPNDQTYLSLI 549
Query: 496 CGYSSLGMYREITIVWGDIKRLMKGADLVG---NRDLYELLLLNFLRGGYFERVMEVIDH 552
GY S Y ++ ++W ++KR + G G +++L + L ++GG+F+ VM+V++
Sbjct: 550 NGYVSAEKYFDVMMLWNEVKRKLAGDGPKGIKFDQNLVDAFLYAMVKGGFFDAVMQVVEK 609
Query: 553 MRNHNMYTDKWMYKSEFLRLHKNL-YRRLKASDARTEAQSKRFEHVQEFKKWVGID 607
+ ++ DKW YK F+ HK L RL+ + R + E + FK W G++
Sbjct: 610 SKEMKIFVDKWRYKQAFMETHKKLKVARLRKKNVR------KMEALIAFKNWAGLN 659
>Medtr1g066900.1 | PPR containing plant-like protein | HC |
chr1:28759663-28757173 | 20130731
Length = 719
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 140/639 (21%), Positives = 261/639 (40%), Gaps = 63/639 (9%)
Query: 16 TLRNRLIVQSSYSNDHVWIRKACDLALQIVEEKS-GLLQSDGLIKLALSLARLQMLSHVS 74
T +RL+ Q SY+N + +A + ++ E L S+ L LA++ A+ + S
Sbjct: 78 TCLSRLLSQLSYNNTPSSLTRAQSILTRLRNESQLHRLDSNSLGLLAVASAKAGHTIYAS 137
Query: 75 VILRLMLNKGCVPPMNLLSLVVFHVVKTE--IGTQIASNYLSQVCDFYNCLNDKKSHLAV 132
+++ ML G +P + S VV + + G A V L D + +A
Sbjct: 138 SVVKSMLRSGYLPHVKAWSAVVSRLASDDDASGPAEAIRLFRAVTRRLRKLPDLE--MAA 195
Query: 133 MVKPDTVVFNLVLDACVRFKLSLKGLCLIELMAMTGTVADAHSIVLISQILEMNGLRDEM 192
+PDTV FN VL+AC L + + M G V D+ S ++ ++ NG +D +
Sbjct: 196 ESRPDTVAFNAVLNACANLGDGKMFLQVFDEMPGFGVVPDSLSYNIVMKLCCGNGRKDLL 255
Query: 193 MELKGHIDGVSAAYARHYSQFYDSLLSLHFKFNDIDAAAKLVLDM-NRLRD-CHISKECT 250
+ + I ++ SL++ + FND++ A K+V M + RD C I +E
Sbjct: 256 VFVLERILQLNIPLCM---TTLHSLVAAYVDFNDLETAEKIVQAMREKRRDLCRILRESN 312
Query: 251 KRLQKPCFIGIGSSNLKNGLKIHIEPELLQKDSVLKVEGRQNLIFYKGGKLALSNRAMVM 310
+ ++ ++ + L P L+ S N + + R
Sbjct: 313 SQYS---YVDDDVDSVFHKLL----PNLIMDKS---ANHNVNDLPLLPKAYTPNTRIYTT 362
Query: 311 FICGYKKDGQIXXXXXXXXXX--QEGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVE 368
+ GY K G++ QE + + V+ A ++ G+++ AH +L ++
Sbjct: 363 LMKGYMKAGRVADTVRMLEAMRYQEDSSSHPDHVSYTTVVSALVKAGFMDRAHQVLAEMT 422
Query: 369 ATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK-VSLHHK------------LSDDA 415
G P R TY +LL Y +A LL++M + + + L DD+
Sbjct: 423 RIGVPANRITYNILLKGYCKQLQMDKAMELLQEMAEDIGIEPDVVSYNILIDGCILVDDS 482
Query: 416 ------FD----KHIICEETAYSVGKSDLAVA----LAQILKGE---DQTVLPLVYNFNS 458
F+ K I + +Y+ A++ LAQ + E D V + +N
Sbjct: 483 AGALSFFNEMRAKGIAPTKVSYTTLMKAFALSGQPKLAQRVFDEMVTDARVRVDLIAWNM 542
Query: 459 SIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLM 518
+ + + G++E+ K ++M + P + T+ S E I+W ++K
Sbjct: 543 LVEGYSRLGLVEEVKKVIQKMKENGFYPNVSTYGSFANAISLARKPGEALILWNEVKERC 602
Query: 519 KGADLVGNRD-----------LYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 567
+ A G D L + L +R +F + +E++ M + + +K Y
Sbjct: 603 ELAKEGGKTDSSVPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGISPNKTKYTR 662
Query: 568 EFLRLHKNLYRRLKASDARTEAQSKRFEHVQEFKKWVGI 606
++ +H ++ AS AR + + +R + FK W+G+
Sbjct: 663 IYVEMHSRMFTSKHASKARQDRRVERKRAAEAFKFWLGL 701
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 348 IGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY---QNGGMQREAKALLKQMKK 404
I + G L A D ++D++A G TY L+ Y + G +A+A +K+M
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-- 264
Query: 405 VSLHHKLSDD--AFDKHI--ICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 460
L +K+ + F+ I C++ ++A A + + Q + P + +NS I
Sbjct: 265 --LANKICPNEVTFNTLIDGFCKD-------ENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 461 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 520
C G +E+A+ + +M + ++P I T+ ++ G+ M +E T V+ D+ +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK---- 371
Query: 521 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHM 553
+LV N + ++ + + G E + M
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 22/213 (10%)
Query: 348 IGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY---QNGGMQREAKALLKQMKK 404
I + G L A D ++D++A G TY L+ Y + G +A+A +K+M
Sbjct: 73 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-- 130
Query: 405 VSLHHKLSDD--AFDKHI--ICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 460
L +K+ + F+ I C++ ++A A + + Q + P + +NS I
Sbjct: 131 --LANKICPNEVTFNTLIDGFCKD-------ENVAAAKKAFEEMQKQGLKPNIVTYNSLI 181
Query: 461 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 520
C G +E+A+ + +M + ++P I T+ ++ G+ M +E T V+ D+ +
Sbjct: 182 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK---- 237
Query: 521 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHM 553
+LV N + ++ + + G E + M
Sbjct: 238 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 270
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 348 IGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAY---QNGGMQREAKALLKQMKK 404
I + G L A D ++D++A G TY L+ Y + G +A+A +K+M
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-- 264
Query: 405 VSLHHKLSDD--AFDKHI--ICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSI 460
L +K+ + F+ I C++ ++A A + + Q + P + +NS I
Sbjct: 265 --LANKICPNEVTFNTLIDGFCKD-------ENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 461 FFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKG 520
C G +E+A+ + +M + ++P I T+ ++ G+ M +E T V D+ +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDDVSK---- 371
Query: 521 ADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYK 566
+LV N + ++ + + G E + M + + YK
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYK 417
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 25/240 (10%)
Query: 333 EGLYAVAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQ 392
+GL VA S +I + G + + + ++ +G TY ++ Y N G
Sbjct: 226 KGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSSVIGEYCNDGSI 285
Query: 393 REAKALLKQMKKVSLHHKLSDDAFDKHIICEETAYSV------GKSDLAVALAQILKGED 446
+A + +M+ +K I C Y++ L A+ +
Sbjct: 286 DKAFNVFDEMR-------------EKDIACSIMTYNLLINGLCRMKKLGEAVKLFYRVNR 332
Query: 447 QTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLG-MYR 505
+ P ++ +N+ I +C A I+ A++ Y + + PT+ T+ ++ GYS +G +
Sbjct: 333 VGLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAG 392
Query: 506 EITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 565
+ +V + M+ ++ + Y +LL F+R Y E+ E+ M + +D + Y
Sbjct: 393 ALNLV-----KEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLVSDVYTY 447
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 355 GWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDD 414
G + D+ +++ + + TY +L+ + GG +E V+L H + D+
Sbjct: 363 GRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEV---------VTLFHDMVDE 413
Query: 415 AFDKHI-ICEETAYSVGKSDLAVALAQIL-KGEDQTVLPLVYNFNSSIFFFCKAGMIEDA 472
+ ++ E ++ GK L +IL ++ ++P + I + +A + E+A
Sbjct: 414 NIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEA 473
Query: 473 LKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIV 510
L A+ M ++ PT++T+ ++C +S G+Y+E+ +
Sbjct: 474 LVAFNTMNEVGSTPTVETYNSLVCSFSRGGLYKEVEAI 511
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 19/270 (7%)
Query: 301 LALSNRAMVMFICGYKKDGQIXXXXXXXXXXQEGLYAVAGSSLC-SDVIGACIQMG--WL 357
+A S A I Y ++GQ ++ V+ S L + VI AC + G W
Sbjct: 169 VARSVFAYTAVINAYGRNGQFQTSVELLESMKQ--ERVSPSILTYNTVINACARGGLDW- 225
Query: 358 ESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFD 417
E + ++ G TY LLSA + G+ EA+ + + M + + ++ ++
Sbjct: 226 EGLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYL 285
Query: 418 KHIICEETAYSVGKSDLAVALAQILKG-EDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 476
H + GK + ++++L+ E LP V ++N + + G I++++ +
Sbjct: 286 VH--------TFGKLNKLEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVF 337
Query: 477 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 536
R+M + P T++ +L Y G Y ++ D+ MK ++ + Y +L+
Sbjct: 338 RQMQEAGCVPNSATYSILLNLYGKHGRYDDVR----DLFLEMKVSNTDPDAGTYNILIQV 393
Query: 537 FLRGGYFERVMEVIDHMRNHNMYTDKWMYK 566
F GGYF+ V+ + M + N+ + Y+
Sbjct: 394 FGEGGYFKEVVTLFHDMVDENIEPNMETYE 423
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 95/233 (40%), Gaps = 32/233 (13%)
Query: 357 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKV-----SLHHKL 411
LE ++L ++E+ GS +Y +LL AY + G +E+ + +QM++ S + +
Sbjct: 295 LEKVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATYSI 354
Query: 412 SDDAFDKHIICEET-----AYSVGKSDLAVALAQILK---GE---------------DQT 448
+ + KH ++ V +D IL GE D+
Sbjct: 355 LLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVDEN 414
Query: 449 VLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREIT 508
+ P + + IF K G+ EDA K M + I P+ + + ++ Y +Y E
Sbjct: 415 IEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEAL 474
Query: 509 IVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTD 561
+ + + + + + Y L+ +F RGG ++ V ++ M + D
Sbjct: 475 VAFNTMNEVGSTPTV----ETYNSLVCSFSRGGLYKEVEAILFRMSESGLPRD 523
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 347 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 406
+I A + G A +I+DD+ P R TY L++A + G +EA + K+M
Sbjct: 191 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 250
Query: 407 L-----HHKLSDDAFDK-----------------HIICEETAYSV--------GKSDLAV 436
+ H + AF HI + T +++ + D AV
Sbjct: 251 VGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAV 310
Query: 437 ALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLC 496
+ +K + P V F S I + G IE+ A+ M ++P I ++ +L
Sbjct: 311 DIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLG 370
Query: 497 GYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNH 556
Y++ GM E V+ +IK+ D+V Y LL + R ++ E+ ++ +
Sbjct: 371 AYAARGMENEALQVFNEIKQNGFRPDVVS----YTSLLNAYGRSRKPQKAREIFKMIKRN 426
Query: 557 NM 558
N+
Sbjct: 427 NL 428
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 34/242 (14%)
Query: 347 VIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVS 406
+I A + G A +I+DD+ P R TY L++A + G +EA + K+M
Sbjct: 52 LINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNG 111
Query: 407 L-----HHKLSDDAFDK-----------------HIICEETAYSV--------GKSDLAV 436
+ H + AF HI + T +++ + D AV
Sbjct: 112 VGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAV 171
Query: 437 ALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLC 496
+ +K + P V F S I + G IE+ A+ M ++P I ++ +L
Sbjct: 172 DIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLG 231
Query: 497 GYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNH 556
Y++ GM E V+ +IK+ D+V Y LL + R ++ E+ ++ +
Sbjct: 232 AYAARGMENEALQVFNEIKQNGFRPDVVS----YTSLLNAYGRSRKPQKAREIFKMIKRN 287
Query: 557 NM 558
N+
Sbjct: 288 NL 289
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 23/224 (10%)
Query: 357 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 416
+ A I + + G ++Y +L++ + M EA LLK+M HHK
Sbjct: 228 VNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM-----HHK------ 276
Query: 417 DKHIICEETAYS------VGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIE 470
II YS ++ AL + + D+ P + ++S + CK ++
Sbjct: 277 --QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334
Query: 471 DALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLY 530
+A+ +M IQP + T+ ++ G G + V+ D+ L+KG +L N Y
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDL--LVKGHNL--NVYTY 390
Query: 531 ELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHK 574
+++ F G F+ + ++ M ++ + Y+ L L K
Sbjct: 391 TVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFK 434
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 114/266 (42%), Gaps = 20/266 (7%)
Query: 305 NRAMVMFICGYKKDGQIXXXXXX-XXXXQEGLYA--VAGSSLCSDVIGACIQMGWLESAH 361
N+ + + + G+ K+G++ ++G+ V SSL G C+ + + A
Sbjct: 267 NKMIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMD---GYCL-VNEVNKAE 322
Query: 362 DILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHII 421
I + + G ++Y ++++ + M EA L K+M HHK F I
Sbjct: 323 SIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEM-----HHK---QIFPDVIT 374
Query: 422 CEETAYSVGKSD-LAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMG 480
+ KS ++ AL + + D+ V P + +NS + CK ++ A+ +
Sbjct: 375 YSALIDGLCKSGRISYALQLVDQMHDRGVAPNIVTYNSILDALCKTHQVDKAIALLTKFK 434
Query: 481 KMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRG 540
IQP++ T+ ++ G G ++ ++ D+ L+KG ++ N Y +++ F
Sbjct: 435 DQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDL--LVKGYNITVNT--YTVMIQGFCSH 490
Query: 541 GYFERVMEVIDHMRNHNMYTDKWMYK 566
G + + ++ M + D Y+
Sbjct: 491 GLLDESLALLSKMEENGCIPDAVTYE 516
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 449 VLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQP---TIQTFAYMLCGYSSLGMYR 505
V P V FN I +C E+AL+ +MG+ P T T LC S L R
Sbjct: 207 VQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVR 266
Query: 506 EITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 565
++ + MK + L NR+ Y +L+ + + + + EVI+ M M D W Y
Sbjct: 267 DLLLQ-------MKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTY 319
Query: 566 KS 567
+
Sbjct: 320 NT 321
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)
Query: 344 CSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMK 403
C+ VI AC + G L+ A DD++ G G TY +L + G+ EA +LK+M+
Sbjct: 311 CTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEME 370
Query: 404 KVSLHHKLSDDAFDKHIICEETAY-SVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFF 462
+ DA + + AY G D A+ + + V+P + + I
Sbjct: 371 D----NNCEPDAITYNELV--AAYVRAGFHDEGAAVIDTMAS--KGVMPNAITYTTVINA 422
Query: 463 FCKAGMIEDALKAYRRMGKMKIQPTIQTFAYML 495
+ KAG + AL+ + +M ++ P + T+ +L
Sbjct: 423 YGKAGDADKALEVFGQMKELGCVPNVCTYNNVL 455
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 94/220 (42%), Gaps = 29/220 (13%)
Query: 357 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 416
L+ A + ++ + P+ TY +L+ ++ GM A++ +M + +
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGI--------- 424
Query: 417 DKHIICEETAYSVGK--------SDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGM 468
ET Y DL+ A K ++ + P F + I +CK
Sbjct: 425 ------RETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQ 478
Query: 469 IEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGD-IKRLMKGADLVGNR 527
+E A K YR M + +I P++ TF ++ G S E + ++ + ++R +K ++
Sbjct: 479 VEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVT--- 535
Query: 528 DLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 567
Y +++ + + ++ E+++ M ++ + D + Y+
Sbjct: 536 --YNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRP 573
>Medtr5g045490.1 | PPR containing plant-like protein | HC |
chr5:19957328-19961582 | 20130731
Length = 691
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 357 LESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAF 416
+E A + +++A G T+ +L+ AY + ++LL +MK L K + +++
Sbjct: 370 VEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGL--KPNANSY 427
Query: 417 DKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAY 476
C +AY K +A LK + + P +++ + I + +G E A +
Sbjct: 428 ----TCLISAYGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVF 483
Query: 477 RRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLN 536
M + I+P+I+T+ +L + +G + +W +LM + G + + +L+
Sbjct: 484 ENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIW----KLMMSEKVKGTQVTFNILVDG 539
Query: 537 FLRGGYFERVMEVIDH 552
F + G F +VI
Sbjct: 540 FAKQGLFMEARDVISE 555
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 345 SDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKK 404
+++I AC G + A ++ + G T+ ++L+A+++G +A + + +K
Sbjct: 20 NNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKG 79
Query: 405 VSLHHKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFC 464
+ + H + + Y D AV + +K + P V F S I +
Sbjct: 80 THIRPDTTTHNIIIHCLVKLKQY-----DKAVDIFNSMKEKKSECHPDVVTFTSMIHLYS 134
Query: 465 KAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLV 524
G IE+ A+ M ++P I ++ +L Y++ GM E V+ +IK+ D+V
Sbjct: 135 VCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVV 194
Query: 525 GNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNM 558
Y LL + R ++ E+ ++ +N+
Sbjct: 195 S----YTSLLNAYGRSRKPQKAREIFKMIKRNNL 224
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 446 DQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRM---GKMKI-QPTIQTFAYMLCGYSSL 501
++ +LP V FNS I C+AG + +A + +R M G++ + +P + TF ML G+
Sbjct: 247 EKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQE 306
Query: 502 GMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTD 561
GM E + ++ + KG + V + + Y LL LR G V+D M + + +
Sbjct: 307 GMMEEARSL---VETMKKGGNFV-SLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPN 362
Query: 562 KWMY 565
+ Y
Sbjct: 363 IYSY 366
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 15/212 (7%)
Query: 358 ESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFD 417
+ A +L D+E+ G TY L+SA+ GG EA L QM + + D F
Sbjct: 364 KEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQM----VEKGIKPDVFT 419
Query: 418 KHIICE--ETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKA 475
+ E A GK + A + +K P + FN+ I GM + +K
Sbjct: 420 YTTLLSGFEKA---GKDEFAFEVYDEMKAAG--CKPNICTFNALIKMHGNRGMFVEMMKV 474
Query: 476 YRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLL 535
+ + + P I T+ +L + M E+ V+ ++KR + V RD + L+
Sbjct: 475 FEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKR----SGFVPERDTFNTLIS 530
Query: 536 NFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 567
+ R G F++ M V M + D Y +
Sbjct: 531 AYSRCGSFDQAMAVYKSMLESGVSPDLSTYNA 562
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 15/212 (7%)
Query: 358 ESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFD 417
+ A +L D+E+ G TY L+SA+ GG EA L QM + + D F
Sbjct: 364 KEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEASRLKVQM----VEKGIKPDVFT 419
Query: 418 KHIICE--ETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKA 475
+ E A GK + A + +K P + FN+ I GM + +K
Sbjct: 420 YTTLLSGFEKA---GKDEFAFEVYDEMKAAG--CKPNICTFNALIKMHGNRGMFVEMMKV 474
Query: 476 YRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLL 535
+ + + P I T+ +L + M E+ V+ ++KR + V RD + L+
Sbjct: 475 FEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKR----SGFVPERDTFNTLIS 530
Query: 536 NFLRGGYFERVMEVIDHMRNHNMYTDKWMYKS 567
+ R G F++ M V M + D Y +
Sbjct: 531 AYSRCGSFDQAMAVYKSMLESGVSPDLSTYNA 562
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 14/238 (5%)
Query: 338 VAGSSLCSDVIGACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKA 397
V L +G +MG + A +D ++ G + Y L + A G EA
Sbjct: 797 VPDKELIETYLGCLCEMGRILDARKCIDSLQRFGYTVPL-CYSLFIRALCRAGKVEEALK 855
Query: 398 LLKQMKKVSLH-HKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNF 456
L++++ ++ KL+ + ++ K L AL ++ + + + + P ++ +
Sbjct: 856 LVEEVGAEKINVEKLTYGSIVHGLL--------QKGKLEEALTKVSRMKQEGITPTIHVY 907
Query: 457 NSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKR 516
S I F K +E A++ Y M + +P + T++ ++ GY ++G Y + W R
Sbjct: 908 TSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYND---AWNVFYR 964
Query: 517 LMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMYKSEFLRLHK 574
MK + Y + L + G E M +I M + +++ F L++
Sbjct: 965 -MKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLISEMLESGIVPSTINFRTVFYGLNR 1021
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 365 DDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQM--KKVSLHHKLSDDAFDKHIIC 422
D V G + + +Y L++ GG REA LL+Q+ K V H + + D+ +C
Sbjct: 162 DKVVGLGFQLNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYNVLIDR--MC 219
Query: 423 EETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKM 482
++ +V LA+ + P V +N+ + C G ++DA+ ++ M
Sbjct: 220 KDKLVNVAFDLYYEMLAK-------RISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSE 272
Query: 483 KIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGY 542
I PT+ TF ++ G+ G ++ +V +M A + N Y L+ F G
Sbjct: 273 NINPTVYTFNILVDGFCKEGKVKDAKVVLA----VMMKAGVKLNAVTYSTLIRGFCIVGK 328
Query: 543 FERVMEVIDHM----RNHNMYT 560
+ +++ + M N N+YT
Sbjct: 329 LKEAVDLFNKMILGKVNPNVYT 350
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 456 FNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIK 515
FN+ I+ C+ G++++A + ++ M I P + +++ ++ G+ G + + V+ +
Sbjct: 254 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKE-- 311
Query: 516 RLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 565
M+ + ++ N Y +L+ F + G ++ +EV + M+N + D + Y
Sbjct: 312 --MRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSY 359
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 349 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 408
G C +MG ++ A +L + + + Y L++ Y G EAK LL Q ++
Sbjct: 255 GLC-RMGQVDEARVLLSKIPNPNTVL----YNTLINGYVASGRFEEAKDLLYQNMVIA-- 307
Query: 409 HKLSDDAFDKHIICEETAYSVGKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGM 468
DAF +I+ + K L AL + + ++ P V + I FCK G
Sbjct: 308 -GFEPDAFMFNIMIDGLC---KKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGK 363
Query: 469 IEDALKAYRRMGKMKIQPTIQTFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRD 528
I+DA + Y M +P I TF ++ G E ++ D+ ++G ++ N
Sbjct: 364 IQDAFQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDM--FLEG--VIANTI 419
Query: 529 LYELLLLNFLRGGYFERVMEVIDHMRNHNMYTDKWMY 565
Y L+ FLRG ++ ++++ M D Y
Sbjct: 420 TYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITY 456
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 26/197 (13%)
Query: 378 TYMLLLSAYQNGGMQREAKALLKQMKKVSLHHKLSDDAFDKHIICEETAYSV-------- 429
TY L+ G +EA L ++M +S D I+ + Y+V
Sbjct: 275 TYSTLMDGLCRNGRLKEAFELFEEM--------VSKD----QIVPDPLTYNVLINGFCRE 322
Query: 430 GKSDLAVALAQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQ 489
GK+D A + + +K + P V+N+++ + CKAG ++DA M ++P
Sbjct: 323 GKADRARNVIEFMK--NNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAI 380
Query: 490 TFAYMLCGYSSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEV 549
T+ ++ +S G E + ++K AD V + ++L R G F+ +++
Sbjct: 381 TYTSLINFFSRNGQIDEAIELLTEMKENDCQADTV----TFNVILGGLCREGRFDEALDM 436
Query: 550 IDHMRNHNMYTDKWMYK 566
I+ + +Y +K Y+
Sbjct: 437 IEKLPQQGVYLNKGSYR 453
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 37/249 (14%)
Query: 349 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 408
G C++ G + A D V A G + + +Y L++ G A LLK++ +
Sbjct: 140 GLCLK-GHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQ 198
Query: 409 H---------------KLSDDAFD-------KHIICEETAY--------SVGKSDLAVAL 438
KL +DAFD K I + Y +V K + A+ L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 439 AQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY 498
+K E+ + P VY FN + FCK G + DA M K I+P + T+ ++ GY
Sbjct: 259 FNKMKKEN--INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316
Query: 499 SSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNM 558
S+ + DI M ++ N +Y ++ F + + + + + MR +
Sbjct: 317 CSINKVNK----AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 559 YTDKWMYKS 567
+ Y S
Sbjct: 373 IPNVVTYSS 381
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 37/249 (14%)
Query: 349 GACIQMGWLESAHDILDDVEATGSPMGRETYMLLLSAYQNGGMQREAKALLKQMKKVSLH 408
G C++ G + A D V A G + + +Y L++ G A LLK++ +
Sbjct: 140 GLCLK-GHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQ 198
Query: 409 H---------------KLSDDAFD-------KHIICEETAY--------SVGKSDLAVAL 438
KL +DAFD K I + Y +V K + A+ L
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDL 258
Query: 439 AQILKGEDQTVLPLVYNFNSSIFFFCKAGMIEDALKAYRRMGKMKIQPTIQTFAYMLCGY 498
+K E+ + P VY FN + FCK G + DA M K I+P + T+ ++ GY
Sbjct: 259 FNKMKKEN--INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316
Query: 499 SSLGMYREITIVWGDIKRLMKGADLVGNRDLYELLLLNFLRGGYFERVMEVIDHMRNHNM 558
S+ + DI M ++ N +Y ++ F + + + + + MR +
Sbjct: 317 CSINKVNK----AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 559 YTDKWMYKS 567
+ Y S
Sbjct: 373 IPNVVTYSS 381