Miyakogusa Predicted Gene

Lj2g3v2475530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JHQ8_SOYBN 988 90.1 93.7 (tr|I1JHQ8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G37020.2 817 77.5 86.2 | Symbols: ARF8 | auxin response factor 8 | chr5:14630151-14633916 FORWARD LENGTH=773
Medicago Medtr5g076270.1 965 89.3 92.5 | auxin response factor 2 | HC | chr5:32499847-32489763 | 20130731
Soybean Glyma02g40650.1 988 90.1 93.7  
LJGI gnl|LJGI|FS338401 507 99.6 99.6 homologue to UniRef100_Q9FGV1 Cluster: Auxin response factor 8; n=3; Arabidopsis thaliana|Rep: Auxin response factor 8 - Arabidopsis thaliana (Mouse-ear cress), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2475530.1 length: 533 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 2.1e-21 128-229
HMMSmart SM01019 B3 3.4e-24 128-230
ProfileScan PS50863 B3 12.379 128-230
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 6.7e-36 254-337
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 5.4e-41 121-243
superfamily SSF101936 DNA-binding 1.1e-55 111-258
no_ID  
HMMPanther PTHR31384 FAMILY 5.7e-223 15-531
Seg seg seg NA 252-259
481-494
523-532
Wolf-PSORT
Lj2g3v2475530.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2475530.1