Miyakogusa Predicted Gene
- Lj2g3v2475530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2475530.1 Non Chatacterized Hit- tr|I1JHQ9|I1JHQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21101
PE,92.36,0,seg,NULL; no description,DNA-binding pseudobarrel domain;
B3,B3 DNA binding domain; FAMILY NOT NAMED,CUFF.38995.1
(1602 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338401 homologue to UniRef100_Q9FGV1 Cluster: Auxin r... 507 e-143
gnl|LJGI|BP043161 homologue to UniRef100_Q9FGV1 Cluster: Auxin r... 325 5e-88
gnl|LJGI|TC64953 homologue to UniRef100_Q6L8U1 Cluster: Auxin re... 218 8e-56
gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromos... 196 3e-49
gnl|LJGI|TC61640 similar to UniRef100_A7PTN8 Cluster: Chromosome... 129 6e-29
gnl|LJGI|AV409033 homologue to UniRef100_Q6L8U3 Cluster: Auxin r... 56 7e-07
>gnl|LJGI|FS338401 homologue to UniRef100_Q9FGV1 Cluster: Auxin response factor 8;
n=3; Arabidopsis thaliana|Rep: Auxin response factor 8 -
Arabidopsis thaliana (Mouse-ear cress), partial (10%)
Length = 709
Score = 507 bits (256), Expect = e-143
Identities = 259/260 (99%)
Strand = Plus / Plus
Query: 1 atgaagctctcaacatcagggatgggtcagcagggacatgaaggaggggagaagaagtgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 450 atgaagctctcaacatcagggatgggtcagcagggacatgaaggaggggagaggaagtgt 509
Query: 61 ttgaattctgagctatggcatgcatgcgcgggtcccttggtgtccctaccaactgcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttgaattctgagctatggcatgcatgcgcgggtcccttggtgtccctaccaactgcagga 569
Query: 121 actcgtgtggtttacttccctcagggtcatagtgagcaggtttctgccacaactaacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 actcgtgtggtttacttccctcagggtcatagtgagcaggtttctgccacaactaacaga 629
Query: 181 gaaattgatggacacatacccaattacccgagcttgccacctcagctgatttgccaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaaattgatggacacatacccaattacccgagcttgccacctcagctgatttgccaactt 689
Query: 241 cacaatcttacgatgcatgc 260
||||||||||||||||||||
Sbjct: 690 cacaatcttacgatgcatgc 709
>gnl|LJGI|BP043161 homologue to UniRef100_Q9FGV1 Cluster: Auxin response factor 8;
n=3; Arabidopsis thaliana|Rep: Auxin response factor 8 -
Arabidopsis thaliana (Mouse-ear cress), partial (9%)
Length = 509
Score = 325 bits (164), Expect = 5e-88
Identities = 209/224 (93%)
Strand = Plus / Plus
Query: 1 atgaagctctcaacatcagggatgggtcagcagggacatgaaggaggggagaagaagtgt 60
|||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 278 atgaagctttcaacatcagggttgggtcagcagggacaagaaggaggggagaagaagtgt 337
Query: 61 ttgaattctgagctatggcatgcatgcgcgggtcccttggtgtccctaccaactgcagga 120
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct: 338 ctgaattctgagctatggcatgcatgcgcggggcccctggtgtccctaccaactgcgggg 397
Query: 121 actcgtgtggtttacttccctcagggtcatagtgagcaggtttctgccacaactaacaga 180
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 398 actcgtgtggtttacttcccccagggtcatagtgagcaggtttctgccactactaacaga 457
Query: 181 gaaattgatggacacatacccaattacccgagcttgccacctca 224
||| ||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 458 gaagttgatgggcacatgcccaattacccaagcttaccacctca 501
>gnl|LJGI|TC64953 homologue to UniRef100_Q6L8U1 Cluster: Auxin response factor 3; n=1;
Cucumis sativus|Rep: Auxin response factor 3 - Cucumis
sativus (Cucumber), partial (26%)
Length = 713
Score = 218 bits (110), Expect = 8e-56
Identities = 458/574 (79%)
Strand = Plus / Plus
Query: 542 gacatatctttcggggacaaccgaaacgacaccttcttacaacaggctggagtgtgtttg 601
|||||||||| || || || |||||| | || || ||||||||||| |||||||| ||||
Sbjct: 49 gacatatcttccgtggccagccgaaaaggcatctacttacaacaggatggagtgtctttg 108
Query: 602 ttagtgccaaaagacttgtggctggtgattctgtgcttttcatttggaatgaaaagaatc 661
| ||||| |||||||| || ||||||||||||||||| || || |||||||||||||||
Sbjct: 109 tgagtgctaaaagactagttgctggtgattctgtgctgttaatctggaatgaaaagaatg 168
Query: 662 agcttcttttgggaatacgtcgtgccaataggccacaaactgttatgccatcttcagttc 721
| | ||| | || || || | ||| ||||| |||||| || | ||||| || || || |
Sbjct: 169 aattgcttctcggcattcggcatgctaatagaccacaacctatgatgccttcatcggtgc 228
Query: 722 tatccagtgatagtatgcacattgggcttcttgctgctgctgcccatgctgcggctacta 781
| || |||||||| |||||| | ||||||||||||||||| || ||||| || || || |
Sbjct: 229 tgtcaagtgatagcatgcacttggggcttcttgctgctgcagctcatgcagctgcaacaa 288
Query: 782 atagctgttttacagtgttctataatccaagggctagtccatctgagtttgtcataccac 841
|||| |||| || | |||||||| || | |||| ||||| || |||||||||||
Sbjct: 289 atagtcgtttcaccattttctataacccgcgtactagcccatcagaatttgtcatacctt 348
Query: 842 ttgcgaaatatatcaaagctgtgtaccacacacgcgtttctgttggtatgcgtttcagaa 901
| ||||| ||| | ||||||||||| || || || ||||| ||||||||||| ||||| |
Sbjct: 349 tagcgaagtatgttaaagctgtgtatcatactcgagtttcagttggtatgcgcttcagga 408
Query: 902 tgctttttgagactgaagaatcaagtgtccgcaggtacatgggtacaataactgggataa 961
|||| ||||| || || ||||| ||||| || | || ||||| || |||||| | || |
Sbjct: 409 tgctatttgaaacagaggaatctagtgtgcggcgatatatgggcacgataactagcatta 468
Query: 962 gtgacctggatcctgttcgttggccgaattctcattggcgatctgttaaggttggttggg 1021
||||| ||||| || || ||||| ||||| |||||||| || || |||||||| ||||
Sbjct: 469 gtgacatggattcttcccggtggccaaattcacattggcgctccgtcaaggttggctggg 528
Query: 1022 atgaatcaacggcaggagaaagacagccacgggtatcattatgggaaattgagcctttaa 1081
||||||| || ||| | || || || || || ||||| |||||||||||||||| ||||
Sbjct: 529 atgaatccacagcaagtgagaggcaacctcgagtatctctatgggaaattgagccattaa 588
Query: 1082 caacatttccaatgtatccatcactattccccct 1115
|||||||||||||||| ||||| | |||||||||
Sbjct: 589 caacatttccaatgtacccatctccattccccct 622
>gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 545
Score = 196 bits (99), Expect = 3e-49
Identities = 357/443 (80%)
Strand = Plus / Plus
Query: 391 acattaacggcaagtgacaccagcacacatggagggttctctgttcctcgacgcgcagct 450
|||||||| |||||||| |||||||| |||||||| || |||||||||||| | ||||||
Sbjct: 74 acattaactgcaagtgataccagcactcatggaggattttctgttcctcgaagagcagct 133
Query: 451 gagaaagttttccctccactggatttctcacagcaaccacctgcacaagaactaattgct 510
|| ||||| |||||||| || |||| ||||||||| || ||||| ||||||||||||||
Sbjct: 134 gaaaaagtcttccctcctcttgattactcacagcagcctcctgctcaagaactaattgcg 193
Query: 511 agggatctccatgatgttgagtggaagtttcgacatatctttcggggacaaccgaaacga 570
|| ||||| |||| || ||||| || ||||||| || || || || || ||| |
Sbjct: 194 agagatcttaatgacaacgaatggaaattcagacatatattccgaggtcagcctaaaagg 253
Query: 571 caccttcttacaacaggctggagtgtgtttgttagtgccaaaagacttgtggctggtgat 630
|| ||||| || ||||| |||||||| ||||| ||||| ||||| ||||| || ||||||
Sbjct: 254 catcttctgactacaggatggagtgtctttgtcagtgctaaaaggcttgttgccggtgat 313
Query: 631 tctgtgcttttcatttggaatgaaaagaatcagcttcttttgggaatacgtcgtgccaat 690
|| || |||||||| ||||||||||||||||| || || ||||| || || || || |||
Sbjct: 314 tcagtccttttcatctggaatgaaaagaatcaactactcttgggcattcgacgagcaaat 373
Query: 691 aggccacaaactgttatgccatcttcagttctatccagtgatagtatgcacattgggctt 750
| | || || |||||||||| || ||||| || |||||||| ||||||||||| |||
Sbjct: 374 cgttcgcagaccattatgccatcatcggttctgtcaagtgatagcatgcacattggcctt 433
Query: 751 cttgctgctgctgcccatgctgcggctactaatagctgttttacagtgttctataatcca 810
||||||||||| || ||||| || | || ||||| | ||||| | |||||||||||
Sbjct: 434 cttgctgctgcagctcatgcagcttccacaaatagtcgctttaccatattctataatcct 493
Query: 811 agggctagtccatctgagtttgt 833
||||| || |||||||| |||||
Sbjct: 494 agggcaagcccatctgaatttgt 516
>gnl|LJGI|TC61640 similar to UniRef100_A7PTN8 Cluster: Chromosome undetermined
scaffold_30, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_30, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (22%)
Length = 730
Score = 129 bits (65), Expect = 6e-29
Identities = 209/257 (81%)
Strand = Plus / Plus
Query: 40 gaaggaggggagaagaagtgtttgaattctgagctatggcatgcatgcgcgggtcccttg 99
|||| |||||||||||| |||||||||||||| || ||||||||||| || || || ||
Sbjct: 455 gaagaaggggagaagaaatgtttgaattctgaactttggcatgcatgtgctggccctctg 514
Query: 100 gtgtccctaccaactgcaggaactcgtgtggtttacttccctcagggtcatagtgagcag 159
|| ||||| || | |||| ||||| || ||||| || || ||||| |||||||||
Sbjct: 515 gtttccctgcctcccattggaagccgtgtagtctactttccccaaggtcacagtgagcag 574
Query: 160 gtttctgccacaactaacagagaaattgatggacacatacccaattacccgagcttgcca 219
||| |||| |||||||||| ||| | |||| ||| || || |||||||| | ||||||
Sbjct: 575 gttgctgcttcaactaacagggaagtagatgcacatattcctaattaccccaacttgccg 634
Query: 220 cctcagctgatttgccaacttcacaatcttacgatgcatgcagatgttgaaacagatgaa 279
|| ||||| || || |||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 635 ccacagcttatctgtcaacttcacaatgaaacaatgcatgcagatgctgaaacagatgaa 694
Query: 280 gtctatgctcaaatgac 296
|| ||||||||||||||
Sbjct: 695 gtttatgctcaaatgac 711
>gnl|LJGI|AV409033 homologue to UniRef100_Q6L8U3 Cluster: Auxin response factor 1;
n=1; Cucumis sativus|Rep: Auxin response factor 1 -
Cucumis sativus (Cucumber), partial (13%)
Length = 418
Score = 56.0 bits (28), Expect = 7e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 238 cttcacaatcttacgatgcatgcagatgttgaaacagatgaagtctatgctcaaatgaca 297
||||||||| || || ||||||| ||| |||||| || ||||||||||| ||||||||
Sbjct: 216 cttcacaatgttgcgctgcatgctgatcctgaaactgacgaagtctatgcacaaatgacc 275
Query: 298 cttcagcc 305
||||||||
Sbjct: 276 cttcagcc 283